BLASTX 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig480 (1,471,779 letters) Database: Phage.aa 14,420 sequences; 3,019,461 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_536383.1|DNA adenine methylase 381 e-104 ref|NP_945057.1|gp26 381 e-104 ref|YP_164085.1|Dam modification methylase 375 e-102 ref|NP_944261.1|putative TnpA transposase 255 6e-66 ref|NP_945090.1|gp59 217 2e-54 ref|NP_046572.1|ABC transporter 206 5e-51 ref|NP_958229.1|gene 55 protein 179 7e-43 ref|NP_061653.1|transposase 153 4e-35 ref|YP_025041.1|putative transposase B 139 6e-31 ref|NP_536395.1|ISBt3 transposase subunit protein 131 2e-28 ref|NP_542261.1|unknown 127 3e-27 ref|NP_042035.1|integrase 124 3e-26 ref|NP_859396.1|hypothetical protein 122 1e-25 ref|NP_050655.1|Gin 120 2e-25 ref|YP_006499.1|Cin 116 5e-24 ref|YP_164334.1|integrase 115 9e-24 ref|NP_945089.1|gp58 110 2e-22 ref|NP_958192.1|gene 16 protein 104 2e-20 ref|NP_112034.1|integrase 100 4e-19 ref|YP_024945.1|gp25 82 1e-13 ref|NP_892074.1|partitioning protein SpyA 81 3e-13 ref|NP_848235.1|integrase 78 2e-12 ref|YP_164275.1|DNA adenine methyltransferase 76 6e-12 ref|NP_037691.1|IS903 transposase 75 1e-11 ref|NP_040341.1|putative transposase 73 5e-11 ref|NP_852580.1|DNA integration 73 5e-11 ref|NP_511017.1|methylase 68 2e-09 ref|NP_795396.1|site-specific recombinase 67 4e-09 ref|YP_006605.1|Gp25 66 6e-09 ref|NP_817650.1|gp61 66 8e-09 ref|NP_463492.1|putative integrase 65 1e-08 ref|NP_862871.1|gp32 64 2e-08 ref|NP_046923.1|gp28 64 3e-08 ref|NP_061635.1|transposase 64 4e-08 ref|NP_112664.1|INT 63 5e-08 ref|NP_690785.1|site-specific recombinase for integration and ex... 63 7e-08 ref|YP_006528.1|ParA 61 2e-07 ref|NP_665964.1|putative plasmid partitioning protein Soj 61 3e-07 ref|NP_046877.1|putative non-heme haloperoxidase 59 1e-06 ref|NP_612875.1|putative recombinase 57 4e-06 ref|NP_818239.1|gp188 56 9e-06 ref|NP_720278.1|Int 55 1e-05 ref|NP_059584.1|Int 55 1e-05 ref|NP_042041.1|transcriptional regulator 55 1e-05 ref|NP_040813.1|integrase 55 1e-05 ref|NP_945064.1|gp33 54 3e-05 ref|NP_061531.1|integrase 54 3e-05 ref|NP_050999.1|P38 54 3e-05 ref|NP_700401.1|Integrase protein 54 4e-05 ref|YP_006360.1|Int 53 6e-05 ref|NP_599058.1|integrase 52 1e-04 ref|NP_536390.1|putative site-specific integrase 51 3e-04 ref|NP_075464.1|integrase 50 4e-04 ref|NP_058467.1|integrase 50 4e-04 ref|NP_958623.1|77ORF007 50 4e-04 ref|NP_803307.1|integrase 50 5e-04 ref|NP_620626.1|putative transposase 48 0.002 ref|NP_919008.1|conserved hypothetical protein 48 0.002 ref|YP_024685.1|gp12 48 0.002 ref|NP_958698.1|Bbp29 48 0.002 ref|NP_996591.1|primase 48 0.002 ref|NP_996639.1|primase 48 0.002 ref|YP_077258.1|Nucleoside-diphosphate-sugar epimerase 47 0.003 ref|NP_536628.1|Int 47 0.004 ref|NP_076780.1|integrase 45 0.012 ref|NP_046574.1|unknown 45 0.015 ref|NP_958230.1|gene 56 protein 45 0.020 ref|NP_046786.1|Int 45 0.020 ref|NP_690787.1|immunity repressor 45 0.020 ref|NP_958300.1|hypothetical protein 44 0.026 ref|NP_817718.1|gp41 44 0.034 ref|NP_938213.1|A transposase 44 0.045 ref|NP_438136.1|hypothetical protein 43 0.058 ref|NP_795571.1|hypothetical protein 43 0.058 ref|NP_042036.1|DNA primase 43 0.076 ref|NP_040602.1|Tail fiber protein 43 0.076 ref|YP_024421.1|Hypothetical protein 42 0.100 ref|NP_049793.1|Hoc head outer capsid protein 42 0.100 ref|NP_878228.1|Int 42 0.100 ref|NP_839878.1|Int 42 0.100 ref|NP_075302.1|gp35 42 0.13 ref|NP_536643.1|hypothetical protein 42 0.13 ref|NP_852723.1|putative integrase 42 0.13 ref|NP_818270.1|gp220 42 0.17 ref|NP_758949.1|ORF58 41 0.22 ref|NP_958191.1|gene 15 protein 41 0.22 ref|NP_932576.1|hinge connector of long tail fiber distal connector 41 0.22 ref|YP_164319.1|hypothetical protein 41 0.29 ref|NP_958209.1|gene 33 protein 41 0.29 ref|NP_861884.1|Hoc head outer capsid protein 41 0.29 ref|NP_958298.1|hypothetical protein 41 0.29 ref|NP_958084.1|gp27 41 0.29 ref|NP_438114.1|integrase-like protein 40 0.38 ref|YP_077221.1|Hypothetical protein 40 0.38 ref|NP_795541.1|putative integrase 40 0.38 ref|YP_024964.1|putative prophage repressor protein 40 0.38 ref|NP_510895.1|similar to phage phi 11 integrase 40 0.49 >ref|NP_536383.1|DNA adenine methylase Length = 262 Score = 381 bits (978), Expect = e-104 Identities = 180/263 (68%), Positives = 211/263 (80%) Frame = +1 Query: 484702 MAMPIIPWIGGKRRLADILIPRFPPHRCYVEVFAGAAALFFMRPAAXXXXXXXXXXXXIN 484881 MA PIIPWIGGKRRLAD +IPRFP H CYVEVFAG AAL+FMRP A +N Sbjct: 1 MANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVN 60 Query: 484882 LYRVVQHHLEEFVRQFKWALSSREVFRWLSDTPPHTLTDIQRAARFYYLQQNCFGGRVEG 485061 LYRVVQHHLEEFVRQFKWAL+SR+VF WL T P TLTDIQRAARFYYLQ++CFGG++EG Sbjct: 61 LYRVVQHHLEEFVRQFKWALTSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEG 120 Query: 485062 RTFGTATTSPPGLNLLRLEETLSAAHLRLSGAYIEKLDWQTCVARYDRPHTFFYLDPPYW 485241 +TFGTATT+ PGLNLLR+EE LSAAH+RL+ AYIE+LDW TC+ RYDRPHT FYLDPPY+ Sbjct: 121 QTFGTATTTVPGLNLLRIEEELSAAHIRLANAYIERLDWATCIDRYDRPHTLFYLDPPYF 180 Query: 485242 ETEGYGVPFEFGQYERMAVVLKELQGRAILTINNHPAMRALFTQFEMECVDIQYTVGGAG 485421 ETEGYGV F F +YE+MA L+ ++GRAI+++N+HP +R +F F +E V IQYT+GG G Sbjct: 181 ETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIGG-G 239 Query: 485422 NTAPRSELIIYSWDRTKDPVGLF 485490 R ELII+SWD PVGLF Sbjct: 240 KGVERRELIIFSWDDAAQPVGLF 262 >ref|NP_945057.1|gp26 Length = 262 Score = 381 bits (978), Expect = e-104 Identities = 180/263 (68%), Positives = 211/263 (80%) Frame = +1 Query: 484702 MAMPIIPWIGGKRRLADILIPRFPPHRCYVEVFAGAAALFFMRPAAXXXXXXXXXXXXIN 484881 MA PIIPWIGGKRRLAD +IPRFP H CYVEVFAG AAL+FMRP A +N Sbjct: 1 MANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVN 60 Query: 484882 LYRVVQHHLEEFVRQFKWALSSREVFRWLSDTPPHTLTDIQRAARFYYLQQNCFGGRVEG 485061 LYRVVQHHLEEFVRQFKWAL+SR+VF WL T P TLTDIQRAARFYYLQ++CFGG++EG Sbjct: 61 LYRVVQHHLEEFVRQFKWALTSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEG 120 Query: 485062 RTFGTATTSPPGLNLLRLEETLSAAHLRLSGAYIEKLDWQTCVARYDRPHTFFYLDPPYW 485241 +TFGTATT+ PGLNLLR+EE LSAAH+RL+ AYIE+LDW TC+ RYDRPHT FYLDPPY+ Sbjct: 121 QTFGTATTTVPGLNLLRIEEELSAAHIRLANAYIERLDWATCIDRYDRPHTLFYLDPPYF 180 Query: 485242 ETEGYGVPFEFGQYERMAVVLKELQGRAILTINNHPAMRALFTQFEMECVDIQYTVGGAG 485421 ETEGYGV F F +YE+MA L+ ++GRAI+++N+HP +R +F F +E V IQYT+GG G Sbjct: 181 ETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIGG-G 239 Query: 485422 NTAPRSELIIYSWDRTKDPVGLF 485490 R ELII+SWD PVGLF Sbjct: 240 KGVERRELIIFSWDDAAQPVGLF 262 >ref|YP_164085.1|Dam modification methylase Length = 264 Score = 375 bits (963), Expect = e-102 Identities = 177/265 (66%), Positives = 209/265 (78%), Gaps = 1/265 (0%) Frame = +1 Query: 484699 LMAMPIIPWIGGKRRLADILIPRFPPHRCYVEVFAGAAALFFMRPA-AXXXXXXXXXXXX 484875 + A PIIPWIGGKRRLAD + P FP H CYVE FAG AALFF+RP A Sbjct: 1 MSAQPIIPWIGGKRRLADRIFPLFPRHSCYVEPFAGGAALFFLRPVPADVEVLNDINGDL 60 Query: 484876 INLYRVVQHHLEEFVRQFKWALSSREVFRWLSDTPPHTLTDIQRAARFYYLQQNCFGGRV 485055 +NLYRVVQHHLEEFVRQFKWALSSR+VF+WL +T P TLTDIQRAARFYYLQQ+ FGGRV Sbjct: 61 VNLYRVVQHHLEEFVRQFKWALSSRQVFKWLQETRPETLTDIQRAARFYYLQQSAFGGRV 120 Query: 485056 EGRTFGTATTSPPGLNLLRLEETLSAAHLRLSGAYIEKLDWQTCVARYDRPHTFFYLDPP 485235 +G+++GTATTSPPGLNLLRLEETLSAAHLRLS YIE L WQ C+ RYDR HT FY+DPP Sbjct: 121 DGQSYGTATTSPPGLNLLRLEETLSAAHLRLSNTYIEHLSWQDCLRRYDREHTLFYMDPP 180 Query: 485236 YWETEGYGVPFEFGQYERMAVVLKELQGRAILTINNHPAMRALFTQFEMECVDIQYTVGG 485415 YWETEGYGVPF F QY+ MAV+ ++L+G+AI+++N+HP +R F F +E DI YTVGG Sbjct: 181 YWETEGYGVPFGFEQYQEMAVMFRQLKGKAIISLNDHPEIRECFASFHIESTDITYTVGG 240 Query: 485416 AGNTAPRSELIIYSWDRTKDPVGLF 485490 +A R E++I+SWD + +P GLF Sbjct: 241 GQGSAAR-EVLIFSWDLSAEPAGLF 264 >ref|NP_944261.1|putative TnpA transposase Length = 482 Score = 255 bits (652), Expect = 6e-66 Identities = 143/387 (36%), Positives = 222/387 (57%), Gaps = 5/387 (1%) Frame = +1 Query: 914119 NILHLPQYQVLGCKSTDDEMHFQVDVPD-PIACEECGVQGEFVRFGKRDVPYRDLPIHGK 914295 +IL LP + ++ DE D P AC++CGV G + G + + +RD PI G+ Sbjct: 3 DILDLPGWTPTATRTEGDEYIISADYTVLPEACQKCGVIGRVYKHGPKMIIFRDSPIRGR 62 Query: 914296 RVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLD 914475 V++ +R+ CR C TF L + RMT R +Y+E++ +T +A G D Sbjct: 63 PVSIEANAQRFRCRDCGGTFIQPLGGIHPATRMTARCVQYIEEQCLRDTFTRIAEHVGCD 122 Query: 914476 EKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQD 914655 +KTVR + + L + P LGIDE ++ + RCI+T++ R +D+L R + Sbjct: 123 DKTVRTLAGDYIDRLNAEYTPWLPEWLGIDETQIDGKLRCIITDVVNRVPIDMLPDRDKP 182 Query: 914656 VVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKG 914835 +VT +L + K+R V+ +++DMW PY+ A ++V P +VVDKFH+VRMAN A++ +R Sbjct: 183 LVTAWLHQFKERGGVKGLAIDMWKPYKDAAQSVFPGLPVVVDKFHLVRMANRAMDDIRIT 242 Query: 914836 LRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWD 915015 L K+ + + R + +L R + ++ R ++ W P + AY KE FY I+D Sbjct: 243 LAKDQEKAVGRDWMRRKALLRMRYKNLDEQGRFNLQMWLDNEPHVAIAYGLKEAFYDIYD 302 Query: 915016 ATTRLQAEAALDEWIATIP----KGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTE 915183 A +R +AE LD W ++P KG+K + L+ + NWREE + YF D P++N YTE Sbjct: 303 APSRAEAEERLDAWRKSVPADMRKGKKS-FMPLLTSTRNWREEMLAYF--DHPISNGYTE 359 Query: 915184 SINRLAKDKNREGRGYSFEVMRARMLY 915264 ++N +AK NR GRGYSFEV+RAR+LY Sbjct: 360 ALNGVAKVINRAGRGYSFEVLRARLLY 386 Score = 255 bits (652), Expect = 6e-66 Identities = 143/387 (36%), Positives = 222/387 (57%), Gaps = 5/387 (1%) Frame = -2 Query: 412361 NILHLPQYQVLGCKSTDDEMHFQVDVPD-PIACEECGVQGEFVRFGKRDVPYRDLPIHGK 412185 +IL LP + ++ DE D P AC++CGV G + G + + +RD PI G+ Sbjct: 3 DILDLPGWTPTATRTEGDEYIISADYTVLPEACQKCGVIGRVYKHGPKMIIFRDSPIRGR 62 Query: 412184 RVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLD 412005 V++ +R+ CR C TF L + RMT R +Y+E++ +T +A G D Sbjct: 63 PVSIEANAQRFRCRDCGGTFIQPLGGIHPATRMTARCVQYIEEQCLRDTFTRIAEHVGCD 122 Query: 412004 EKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQD 411825 +KTVR + + L + P LGIDE ++ + RCI+T++ R +D+L R + Sbjct: 123 DKTVRTLAGDYIDRLNAEYTPWLPEWLGIDETQIDGKLRCIITDVVNRVPIDMLPDRDKP 182 Query: 411824 VVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKG 411645 +VT +L + K+R V+ +++DMW PY+ A ++V P +VVDKFH+VRMAN A++ +R Sbjct: 183 LVTAWLHQFKERGGVKGLAIDMWKPYKDAAQSVFPGLPVVVDKFHLVRMANRAMDDIRIT 242 Query: 411644 LRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWD 411465 L K+ + + R + +L R + ++ R ++ W P + AY KE FY I+D Sbjct: 243 LAKDQEKAVGRDWMRRKALLRMRYKNLDEQGRFNLQMWLDNEPHVAIAYGLKEAFYDIYD 302 Query: 411464 ATTRLQAEAALDEWIATIP----KGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTE 411297 A +R +AE LD W ++P KG+K + L+ + NWREE + YF D P++N YTE Sbjct: 303 APSRAEAEERLDAWRKSVPADMRKGKKS-FMPLLTSTRNWREEMLAYF--DHPISNGYTE 359 Query: 411296 SINRLAKDKNREGRGYSFEVMRARMLY 411216 ++N +AK NR GRGYSFEV+RAR+LY Sbjct: 360 ALNGVAKVINRAGRGYSFEVLRARLLY 386 >ref|NP_945090.1|gp59 Length = 429 Score = 217 bits (552), Expect = 2e-54 Identities = 129/410 (31%), Positives = 199/410 (48%), Gaps = 2/410 (0%) Frame = -2 Query: 360656 RHALIGGSLGNLLEWYEFAIYAYMVPIVAPLFFHNSDPAANLLATFSIFALGFFLRPVGA 360477 R A+I +GN EW++F Y++ I+A LFF ++D +LL + S +GFF+RP+G Sbjct: 20 RRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGG 79 Query: 360476 LVFGRLTDRVGRRPILILIISLMTVATTCIGLLPTYSQIGIWAPILLTVLRIAQGLSSGG 360297 +V G + D+VGRR L + I+LMT T IG PTY G+ AP+++ V R+ QG S+GG Sbjct: 80 IVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGG 139 Query: 360296 EMGGAVSLMVESAPEGKRGLYGSWSFXXXXXXXXXXXGMATLLATVFSDQILHAWGWRLG 360117 EMGGA + + E P + G Y SW +A + +Q + +WGWR+ Sbjct: 140 EMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIP 199 Query: 360116 FLLAAPLGLVILYLRLNIDETPNFKKVSTTLEKSNPDEVIATPAVPGRPLVHLLATLGIV 359937 FLL LG V +Y+R +++ P F E + EV+ + + L G+V Sbjct: 200 FLLGLGLGPVGIYIRSRLND-PGFPADERLGECAPVVEVVRSFS------REALVGFGLV 252 Query: 359936 VVWNATGNTFMVGMPSFLSHIYGMSFRSSYFLALVTGLIGALTMPFFGALSDRVGRKQVL 359757 V W + +P++ S + + + + LV I P G LSD GR+ L Sbjct: 253 VFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFL 312 Query: 359756 LAGTAGVFFLSYPXXXXXXXXXXXXXXXXXXXXXXXGVLG--GPMPALLSERFRTRNRAT 359583 +YP + GP+ A LS+ F +T Sbjct: 313 AGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLST 372 Query: 359582 GVSVIYAVSVAVFGGTAPFIITFLARVTGDPLAAAYYTIGCAAISLIALA 359433 G+S+ Y ++V FGG + IIT+ T + LA A+Y I A +SLI+++ Sbjct: 373 GISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLISVS 422 Score = 209 bits (531), Expect = 6e-52 Identities = 139/407 (34%), Positives = 203/407 (49%), Gaps = 4/407 (0%) Frame = +1 Query: 264304 ASMAGTTIEWYDFFLYGTAAALVFNKIFFPTLDPILGTMAAFATYGVGFIGRPMGGIVFG 264483 A + G EW+DF Y + ++ K+FFP+ D L + + +T GVGF RP+GGIV G Sbjct: 25 AVIVGNGFEWFDFISYSFFSVIIA-KLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGIVIG 83 Query: 264484 HFGDRIGRKSMLLVTLLLMGIPSMVIGLIPSYQSIGYWAAGLLVAMRFLQGMAVGGEWGG 264663 D++GR++ L VT+ LM + +IG P+Y+ G A ++V R LQG + GGE GG Sbjct: 84 GIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGG 143 Query: 264664 AVLMAVEHAPPGRKGFFGSLPQTGVGFGLILSS-LAMAAVTALPEADLLAWGWRVPFLAS 264840 A E P R G++ S Q +GF +IL+S LA+ V L E + +WGWR+PFL Sbjct: 144 ATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLG 203 Query: 264841 ILLVIIGWVIRVRVPESPDFERVKALGEPVKAPILAAMRRHPRELLIILGARTAENTWXX 265020 + L +G IR R+ P F + LGE AP++ +R RE L+ G Sbjct: 204 LGLGPVGIYIRSRL-NDPGFPADERLGE--CAPVVEVVRSFSREALVGFGLVVFWTVCSY 260 Query: 265021 XXXXXXXXXXXNQLKIPKAAILHAITAGAVLSLFTMPFCGYLSDRIGQKRLFLIGLVIMC 265200 LK+P + A+ GA + LF P G+LSD G +R FL G +++ Sbjct: 261 VLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFG-RRWFLAGALLVA 319 Query: 265201 VFAA-PFFAMLATRHPATVWWAMVLGVGVVFPILYAPESQLFASQFPAEIRYSGISLSVQ 265377 + AA P FAML + G+V P + FP + +GIS+S Sbjct: 320 IVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISISYN 379 Query: 265378 IAGVLGGGVAPMIATALLALGSGN--PHYVVAYMVALGIVALICTLL 265512 +A + GG + I T +A N P + Y++A IV+LI L Sbjct: 380 LAVITFGGFSAAIITWAIATTHNNLAPAF---YVIAAAIVSLISVSL 423 Score = 203 bits (517), Expect = 3e-50 Identities = 126/396 (31%), Positives = 198/396 (50%), Gaps = 7/396 (1%) Frame = -1 Query: 1075341 EYYDFTIYAFLATTIAQVFFPKSDPTAGLLSTFAIFAASFFLRPFGGIVIGHLADKFGRR 1075162 E++DF Y+F + IA++FFP +D LL + + FF+RP GGIVIG +ADK GRR Sbjct: 33 EWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIADKVGRR 92 Query: 1075161 RALTXXXXXXXXXXXXXXLIPSYDMIGVVAPAVLVLLRSIQAFSAGGELGTAASYVAEQS 1074982 ALT P+Y G+ AP ++V+ R +Q FSAGGE+G A +Y+ E+ Sbjct: 93 AALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGGATAYLRERV 152 Query: 1074981 PVKRRGYLTGFVNLGTVTGTLLASFTVALTRAFVADTNFASWGWRIPFLISLPLGIIALI 1074802 P +R GY T ++ +LAS + + SWGWRIPFL+ L LG + + Sbjct: 153 PAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIY 212 Query: 1074801 VRLRMEESIAFEEIAKEKDIKRAPALGVLKARPTAVLVVIALALTSNASYWTVFTYMSTL 1074622 +R R+ + F A E+ + AP + V+++ LV L + +WTV +Y+ Sbjct: 213 IRSRLNDP-GFP--ADERLGECAPVVEVVRSFSREALVGFGLVV-----FWTVCSYVLLF 264 Query: 1074621 LQTQHVIDAKTAAWSTTATLVLAAVSM-----PFWSLLSDRFGRKIVMILVNGLFVVASY 1074457 + ST VL S+ P LSD FGR+ + + +VA+Y Sbjct: 265 YIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGALLVAIVAAY 324 Query: 1074456 PLFKLATHSAGVG--IAVQLILGQITACYXXXXXXXXXXXXXASMRVSGFALGYNIASIL 1074283 PLF + + G+ + Q++ G + A Y + +G ++ YN+A I Sbjct: 325 PLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISISYNLAVIT 384 Query: 1074282 AGGSAGYVATWLVAHTGNPASPAFFVMVATGLALVA 1074175 GG + + TW +A T N +PAF+V+ A ++L++ Sbjct: 385 FGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLIS 420 Score = 201 bits (511), Expect = 1e-49 Identities = 134/428 (31%), Positives = 203/428 (47%), Gaps = 6/428 (1%) Frame = -2 Query: 228431 MNTNTQATQELAAAPRTWQRSARAIFAGSVGNAVEWFDWSVYTAFAIYFSKQFFPADNDT 228252 M T+T A + +A R RA+ A VGN EWFD+ Y+ F++ +K FFP+ +D Sbjct: 1 MQTSTYAREAAPSASSDTHR--RAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDN 58 Query: 228251 ASLLATFAVFAVGFGMRPLGGWAIGAFSDRFGRRSALTITIVMMAGSSLLISFLPTYRTI 228072 SLL + + VGF MRP+GG IG +D+ GRR+ALT+TI +M + +I F PTY+ Sbjct: 59 LSLLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDA 118 Query: 228071 GVLAPIVMTVLRMLQGLSVGGEYGAATTFLAESAPAGRRGFHGXXXXXXXXXXXXXXXXX 227892 G+ AP+++ V R+LQG S GGE G AT +L E PA R G++ Sbjct: 119 GLGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVL 178 Query: 227891 AWGMTHFMSRAALEDYGWRIPFFIGGCGSLLGFWMRRNVPETVAFEKLRRKGRIEPRSLL 227712 A + + +E +GWRIPF +G +G ++R + + F R G P ++ Sbjct: 179 AVFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDP-GFPADERLGECAP--VV 235 Query: 227711 WTWNHHRGAVLRLVGISVLGAFSFYLFISFMPIYAIRHAGAIPGDXXXXXXXXXXXXXXA 227532 L G+ V Y+ + ++P YA + Sbjct: 236 EVVRSFSREALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFV 295 Query: 227531 QPFFGALSDRIGRR-----PQLIAFAAAYLVFLYPVVTSIGPGFQSMLLVECFGLLTYGF 227367 P G LSD GRR L+A AAY +F + + PG +++L+ + L Sbjct: 296 TPLIGHLSDLFGRRWFLAGALLVAIVAAYPLF---AMLNAAPGLKTLLVFQVVFGLVIAS 352 Query: 227366 YSAIAPSIMAELFSTDVRGVGIGAAYNLVVALLGGTTPYLMTW-LQSIHREGWFLAYVCA 227190 Y + ++++F V GI +YNL V GG + ++TW + + H YV A Sbjct: 353 YEGPILAALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIA 412 Query: 227189 GAAVSLIT 227166 A VSLI+ Sbjct: 413 AAIVSLIS 420 Score = 192 bits (488), Expect = 6e-47 Identities = 117/404 (28%), Positives = 194/404 (48%), Gaps = 8/404 (1%) Frame = +1 Query: 77278 GNATEWFDYGIYAYGLTYISAALFPGSXXXXXXXXXXXXXXXXX-VRPLGGLFWGPLGDR 77454 GN EWFD+ Y++ I+ FP + +RP+GG+ G + D+ Sbjct: 29 GNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIADK 88 Query: 77455 LGRKHVLALTIILMSVATLLVGLVPSYARIGWWAPALLIVLRMIQGFSTGGEYGGAATFM 77634 +GR+ L +TI LM+ T ++G P+Y G AP +++V R++QGFS GGE GGA ++ Sbjct: 89 VGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGGATAYL 148 Query: 77635 AEYAPDKKRGFCGSFLEFATLAGFSLGAFLMLGCSVVLGNASMHAWGWRLPFLIAAPLGL 77814 E P ++ G+ S+++ + L + L + L + +WGWR+PFL+ LG Sbjct: 149 RERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLGLGLGP 208 Query: 77815 IGFYLRSKLEDT--PVFIELEQSSHKEQQGRVSLKALLTGYWKPXXXXXXXXXXXXXXXX 77988 +G Y+RS+L D P L + + + R + L G+ Sbjct: 209 VGIYIRSRLNDPGFPADERLGECAPVVEVVRSFSREALVGF--------GLVVFWTVCSY 260 Query: 77989 XXXXXMPTFMQKQLGMSDNMSLLVPLIGMLTMMVFLPFAGTFSDRIGRKNVWWF---SLI 78159 +PT+ K L + + + L+G ++ P G SD GR+ WF +L+ Sbjct: 261 VLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRR---WFLAGALL 317 Query: 78160 GLFVAAIPMFVLMK--HGMAGALIGFSVLGLLYVPQLASISAMFPAMFPTQVRYAGMAIA 78333 VAA P+F ++ G+ L+ V GL+ I A MFP V G++I+ Sbjct: 318 VAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISIS 377 Query: 78334 YNVSTSIFGGTAPMVNEWFIARTGNALVPAYYMMGACVIGALAL 78465 YN++ FGG + + W IA T N L PA+Y++ A ++ +++ Sbjct: 378 YNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLISV 421 Score = 179 bits (453), Expect = 7e-43 Identities = 119/416 (28%), Positives = 193/416 (46%), Gaps = 8/416 (1%) Frame = +1 Query: 326098 KSMVAAGVGNTLEWFDWTMYATFSPYIAGAFFAKSDPRSMLLSALAVFAVGFLSRPLGGI 326277 ++++A VGN EWFD+ Y+ FS IA FF +D LL +++ VGF RP+GGI Sbjct: 21 RAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGI 80 Query: 326278 VFGVLTDKLGRKGTLVTTVLIMSAASLTIGLMPTYASIGAWSSXXXXXXXXXQGFAHGGE 326457 V G + DK+GR+ L T+ +M+A + IG PTY G + QGF+ GGE Sbjct: 81 VIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGE 140 Query: 326458 MTASYAYLAEIAPAPRRAFWSSSMYVCAGLGGLIATILATVLTNYLTKDVMQAWGWRVPF 326637 M + AYL E PA R +++S + G ++A++LA + L + +++WGWR+PF Sbjct: 141 MGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPF 200 Query: 326638 IVGAVLSIAIIFMRRGMMESDVYEKDREESRGTKSIEVRNRWSRRKIIARTCGMFIYEAS 326817 ++G L I++ R + + D +EV +SR ++ +F S Sbjct: 201 LLGLGLGPVGIYI-RSRLNDPGFPADERLGECAPVVEVVRSFSREALVGFGLVVFWTVCS 259 Query: 326818 ATLPYYVWTSYPAVFAITYRGMAPGSAFAASLGAQIINIICTPVAGWISDHVGRKPLTIF 326997 L +Y+ T +A + + F A L I + TP+ G +SD GR+ Sbjct: 260 YVLLFYIPT-----YASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRR----- 309 Query: 326998 YYLANAIFI-----FPLLGFINDDPW--RLFAAQSCMLAVSACIGGTQSAIASEQIPTAY 327156 ++LA A+ + +PL +N P L Q V A G A S+ P Sbjct: 310 WFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGV 369 Query: 327157 RARVLGTAFPIATAMFGG-TTPYLTSLFYGRGQGWIFNMYLIVVCLIGAIVVARWK 327321 + + ++ +A FGG + +T Y+I ++ I V+ W+ Sbjct: 370 LSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLISVSLWQ 425 Score = 168 bits (426), Expect = 9e-40 Identities = 111/418 (26%), Positives = 189/418 (45%), Gaps = 6/418 (1%) Frame = +2 Query: 935972 ARGTSFDRLSASQWRLIILASLGGALEFYDFVVYGVFAQFIGHAFFSMLDPMMALLLSFA 936151 AR + S + R +I +G E++DF+ Y F+ I FF D ++LLLS + Sbjct: 7 AREAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVS 66 Query: 936152 VFAIGYLSRPIGGAVLSWFGDRYGXXXXXXXXXXXXXXXXXGMGLVPTYASWGIAATVTM 936331 +G+ RPIGG V+ D+ G +G PTY G+ A + + Sbjct: 67 TIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMI 126 Query: 936332 VLLRLIQGFCLGGELPGSITYVVETVP-RRAGFVCGIVFFCVNSGVLLAAAVNLGVHAVL 936508 V+ RL+QGF GGE+ G+ Y+ E VP R G+ + + ++LA+ + + + L Sbjct: 127 VVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCL 186 Query: 936509 APGDVAAYGWRXXXXXXXXXXXXXXWLRRKLEETPEFAQMKNMTAKHPFAELMRDYWRPV 936688 + ++GWR ++R +L + P F + + P E++R + R Sbjct: 187 DEQQIESWGWRIPFLLGLGLGPVGIYIRSRLND-PGFPADERLGECAPVVEVVRSFSREA 245 Query: 936689 LIGILXXXXXXXYNGLLFAHMPAYLDKVLHYDPRQVALGQNVALATASIGIL---LVGRL 936859 L+G + +L ++P Y KVL + G L ASI + L+G L Sbjct: 246 LVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPS---STGFIAVLVGASIVLFVTPLIGHL 302 Query: 936860 GDSMARRHLMRAGAVLLIALTMPFYHA--AVSHRIDLIALMFVGGLGAALINGTFACIIA 937033 D RR + ++ I P + A L+ V GL A G ++ Sbjct: 303 SDLFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALS 362 Query: 937034 DMFPTRVRFSGVALAFNLSFTVFSGTAPLIGTWLIRRTGDLAAPGYFMVACAVLTFLA 937207 DMFP V +G+++++NL+ F G + I TW I T + AP ++++A A+++ ++ Sbjct: 363 DMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLIS 420 Score = 130 bits (327), Expect = 3e-28 Identities = 106/402 (26%), Positives = 165/402 (41%), Gaps = 6/402 (1%) Frame = -3 Query: 1024654 KMILIASLGGSLEFYDFIVYGXXXXXXXXXXFPNXXXXXXXXXXXXXXXIGYVIRPFGGI 1024475 + ++ +G E++DFI Y FP+ +G+ +RP GGI Sbjct: 21 RAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGI 80 Query: 1024474 VLSSWGDRYGRRPVFLGSIIVVTTVTICLGLLPNYQSWGXXXXXXXXXXXLVQGFCVGGE 1024295 V+ D+ GRR +I ++T T +G P Y+ G L+QGF GGE Sbjct: 81 VIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGE 140 Query: 1024294 MPGAVTYAVEAAP-RRAGLAAGIIICAVNTGVLLATLVNLGIQTWLTAADAAAYGWRIAF 1024118 M GA Y E P R G I ++ ++LA+++ + I L ++GWRI F Sbjct: 141 MGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPF 200 Query: 1024117 LFGGVCGVVSWWMRRNLDESPEFKEMRGAVEKQPFRETLRHHGKRVAVGALSIAVMAGIN 1023938 L G G V ++R L++ P F E P E +R + VG + + Sbjct: 201 LLGLGLGPVGIYIRSRLND-PGFPADERLGECAPVVEVVRSFSREALVGFGLVVFWTVCS 259 Query: 1023937 GILYGHMPAYLVQQLHYVPRTAALAQNAYLVVSSCGLLAA---GWLGDKIPXXXXXXXXX 1023767 +L ++P Y + L T + A LV +S L G L D Sbjct: 260 YVLLFYIPTYASKVLKLPSSTGFI---AVLVGASIVLFVTPLIGHLSDLFGRRWFLAGAL 316 Query: 1023766 XXXXXLTYPFYQAL--VKHTVDPXXXXXXXXXXXXXXSGTWASVLADLFPVQIRFSGIAL 1023593 YP + L G + L+D+FP + +GI++ Sbjct: 317 LVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISI 376 Query: 1023592 SYNASVMLFSGFAPLAATMLIRQTGSLSAPAYYVIGASVITL 1023467 SYN +V+ F GF+ T I T + APA+YVI A++++L Sbjct: 377 SYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSL 418 Score = 128 bits (321), Expect = 1e-27 Identities = 63/142 (44%), Positives = 87/142 (61%) Frame = +2 Query: 722225 ELRKKVARAGAIGNFIEFYDFTLYGFFAVTIAELFFPRFDSVAGLLSTFALFGVGFFIRP 722404 + ++ A +GN E++DF Y FF+V IA+LFFP D LL + + GVGFF+RP Sbjct: 17 DTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRP 76 Query: 722405 LGAIAFGHIGDRWGRKRALLIAVGLMSASTAAIGVLPTYTTVGVLAPALLLICRLVQGFS 722584 +G I G I D+ GR+ AL + + LM+A TA IG PTY G+ AP ++++ RL+QGFS Sbjct: 77 IGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFS 136 Query: 722585 AGGEQTGAFVLVVEHSPERERG 722650 AGGE GA + E P G Sbjct: 137 AGGEMGGATAYLRERVPAERHG 158 Score = 79.0 bits (193), Expect = 1e-12 Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 4/255 (1%) Frame = +3 Query: 722664 SLIRSVIG-GVGAAAMFGLVMSTMTTPAEMHAWGWRVPFLIAVPLGLIGLYLRLDIEDSP 722840 S I++ IG + A++ + + ++ +WGWR+PFL+ + LG +G+Y+R + D P Sbjct: 162 SWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLND-P 220 Query: 722841 VYLAAARELEASRQRHAPIAEAFRLAWKQMLVLFGWVAMQSVAGYILVGFMLSRLVTVEH 723020 + A R E AP+ E R ++ LV FG V +V Y+L+ ++ + V Sbjct: 221 GFPADERLGEC-----APVVEVVRSFSREALVGFGLVVFWTVCSYVLLFYIPTYASKVLK 275 Query: 723021 YPVKTXXXXXXXXXXXXXXXXPGIGAWCDRTERSTFXXXXXXXXXXWSVPAFSFLDR--G 723194 P T P IG D R F + P F+ L+ G Sbjct: 276 LPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGALLVAIVAAYPLFAMLNAAPG 335 Query: 723195 LIAATFAMSIYAVIQYSTMIVSATAVVERFPVSVRYSASALPFQLAYTLFGGTAPFVGTW 723374 L ++ ++ S A+ + FP V + ++ + LA FGG + + TW Sbjct: 336 LKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITW 395 Query: 723375 -LTARFSHLAPAYYI 723416 + ++LAPA+Y+ Sbjct: 396 AIATTHNNLAPAFYV 410 Score = 73.2 bits (178), Expect = 5e-11 Identities = 78/318 (24%), Positives = 124/318 (38%), Gaps = 18/318 (5%) Frame = -1 Query: 949767 ISVGYAGQLLGALVLGRLAEARGRTNAALISVAIFTLFSALCALAPSY--------TWLC 949612 I VG+ + +G +V+G +A+ GR A +++A+ T +A+ AP+Y + Sbjct: 68 IGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIV 127 Query: 949611 ACRFLQGVGLGGEVPIAAAYINEFSRAKGRGRSFVLYEASFTLGLVFSSLVGAWIV---- 949444 R LQG GGE+ A AY+ E A+ G +AS ++ +S++ +IV Sbjct: 128 VARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLD 187 Query: 949443 ----PQMGWRV--LLALGAVPAVIILWARRSLPESPRWLAEHGRLAEADXXXXXXXXXXX 949282 GWR+ LL LG P I + +R + P P RL E Sbjct: 188 EQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFP----ADERLGEC------------ 231 Query: 949281 XEGKTLPPPAKAVPRPAMARTRILTRTSLVRSLSVWAMWFACYFLSYGVGTWAPTILRTA 949102 P + R +R +LV + W C SY + + PT Sbjct: 232 --------------APVVEVVRSFSREALV-GFGLVVFWTVC---SYVLLFYIPTYASKV 273 Query: 949101 LHLPLQQALLFSFVLQTLYLCGTLGTAVLVDRLGRKIYFRVAFAGVSIALFCAYSMAGNE 948922 L LP + V ++ L T L D GR+ + A +A + ++M Sbjct: 274 LKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGALLVAIVAAYPLFAMLNAA 333 Query: 948921 IALMALIAGAFVFNAAIS 948868 L L+ VF I+ Sbjct: 334 PGLKTLLVFQVVFGLVIA 351 Score = 52.8 bits (125), Expect = 7e-05 Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 23/170 (13%) Frame = +1 Query: 699400 LRTSVAARLERLPD--SRYLRTAVILISLGTFWD-----SYMLFSVGPISAHFFAYLGQP 699558 ++TS AR E P S R AVI + +G ++ SY FSV A L P Sbjct: 1 MQTSTYAR-EAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSV------IIAKLFFP 53 Query: 699559 HLATELPLALFLGTF--------VGAVCLSTVADTIGRRAAFTLDLCTLAVGALVAAFSP 699714 L L L + T +G + + +AD +GRRAA T+ + + G + F+P Sbjct: 54 STDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAP 113 Query: 699715 N--------ATVLLIALFVAGIGTGAELPLSTTYVQELSPAKARGKKSSF 699840 ++++A + G G E+ +T Y++E PA+ G +S+ Sbjct: 114 TYKDAGLGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSW 163 Score = 47.0 bits (110), Expect = 0.004 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%) Frame = -3 Query: 1066342 GAGLFGTMAGGILLGPVADRYGRKTVLVASVALFGLASVVSAFSPDIH--------FLAF 1066187 G G F GGI++G +AD+ GR+ L ++AL + + F+P + Sbjct: 69 GVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVV 128 Query: 1066186 MRFVTGIGLGGAMPNSITLTSEYCPGAKRSGYVT 1066085 R + G GG M + E P A+R GY T Sbjct: 129 ARLLQGFSAGGEMGGATAYLRERVP-AERHGYYT 161 Score = 45.1 bits (105), Expect = 0.015 Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 22/172 (12%) Frame = -1 Query: 943953 FDAFDALSIALVLPVL------STRWHLTSMSIGILIASGYVGQAIGALLFGSVAERIGR 943792 F+ FD +S + ++ ST +L+ + I G+ + IG ++ G +A+++GR Sbjct: 32 FEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIADKVGR 91 Query: 943791 IKTISLTIVIXXXXXXXXXXAPNY--------AWLCAMRVXXXXXXXXXGPAALAYISEI 943636 +++TI + AP Y + R+ A AY+ E Sbjct: 92 RAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGGATAYLRER 151 Query: 943635 APVERRGAFILSFQFMYAAGFVAASLMGAWIV--------PRFGWQSIFIVG 943504 P ER G + Q + AS++ +IV +GW+ F++G Sbjct: 152 VPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLG 203 >ref|NP_046572.1|ABC transporter Length = 705 Score = 206 bits (523), Expect = 5e-51 Identities = 156/686 (22%), Positives = 322/686 (46%), Gaps = 13/686 (1%) Frame = -1 Query: 1201374 KRRLPMMLQTQAAECGLVCVGMIANY----FGHDMDLASLRRRFTTSLKGATLNDIMQMS 1201207 K++ Q + +CGL C+ I + +G D L + + +G +L D++ + Sbjct: 4 KKKYVHTKQFNSHDCGLACISSILKFHNLNYGIDFLLDLIGDK-----EGYSLRDLIVIF 58 Query: 1201206 NQLGLTPRALRLDLND----LAKLNRPCILHWE---MNHFVVLKEVSRDKITVHDPARG- 1201051 ++G+ R L L N L ++ PCI E H++ + E+ + + V DP + Sbjct: 59 KKMGIKTRPLELQENKTFEALKQIKLPCIALLEGEEYGHYITIYEIRNNYLLVSDPDKDK 118 Query: 1201050 IRDIPMDEVSRGFTGVALELMPSASFQPVAEKQSISMLKLIGGVIGIRSAFVQVLLISAA 1200871 I I ++ FT LE+ + P EK ++ V V+L+++ Sbjct: 119 ITKIKKEDFESKFTNFILEIDKESI--PEKEKDQKKHSYFFKDILFRNKLIVFVILLTSL 176 Query: 1200870 LEV-CGIISPFYMQWVMDQVLVSADVDXXXXXXXXXXXLVVFQNAIAALRSWVVTWFSSL 1200694 V + FY+++++D ++ + + +V+ + +RS+++ S Sbjct: 177 FVVGLAVAGSFYIKFLVDLIIPRSLRESLITITLIFISMVLIRCIFDFVRSYLIIKLSYK 236 Query: 1200693 LSVQWTASVCSHLLKLPMSYFEQRHMGDIVSRFGSVGTIQSMLTSRFISTLLDGVMASIT 1200514 + + + + + KLP+++FE R G+++SRF I+ ++ F++ ++D ++ Sbjct: 237 VDKEMSNVYFNKVTKLPINFFENREDGEVISRFNDGIYIKDFFSANFVTAIIDIILILGL 296 Query: 1200513 LVMLFVYSPMLTWLVLGLFAVYALIRWIAYRPLRRANEDQIAYSARAQSQLLESIRGVQT 1200334 V+L+ + +L ++ + + + + + L++ N+ + A++ S L+ ++ + T Sbjct: 297 GVILYRTNNILFLTIILPILLLSCLAILFFDHLKKKNQKLMEDKAKSTSLLINFLKNMTT 356 Query: 1200333 IKLGNKQEARVATYTNSVVDMTNRGIAIQRLSISFSTLQGVISGIGRVVLIWLAARQVLQ 1200154 + NK + + + N ++ + IS L+G+I ++++W+ RQVL Sbjct: 357 VYSLNKTSFFLEKFHLTYDKQLNSTFSVAKAVISNEILKGLIQNSFTIIILWVGTRQVLN 416 Query: 1200153 NEFSAGMLVAFISFADQFTSRASGLIDTVIDIRMLRLHGERLADIVLTEPESNMEGSVTR 1199974 + S G L+ + A S ++ D++ + R D+V + + ++T Sbjct: 417 DSMSLGTLLFINTLAAFLLSSLDRILSMQSDLQQAHVASIRFFDVVNYPVQQDSNENLTE 476 Query: 1199973 ANLVEEAKDRAPGIEVSNLRFRYADTEPWVIKDCSFTVEPGESVALIGPSGQGKTTMAKL 1199794 + ++ I+ NL AD ++++D + ++ + V +IG SG GK+T AK Sbjct: 477 LDFIQ-------NIKTVNLNIG-ADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKS 528 Query: 1199793 LLGLLMPQKGEIRVDGVDIKKLGMLGYRDMIGSVMQDDILFAGSIADNISFFDTHPDYAQ 1199614 L L I ++G+DI + L R I + ++ LF G+I +N+ + D + Sbjct: 529 LSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTIKENLCMGEIF-DQNE 587 Query: 1199613 VERVARIAQIHDEITAMPMGYQSLVGDMGSSLSGGQAQRVLLARALYRNPSILILDEATS 1199434 +E ++Q H+ I + Y + + GS+LS GQ QR+ LARA+ P +LILDE+ S Sbjct: 588 IENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLS 647 Query: 1199433 HLDVDRERLINDAIRNMEVTRIIIAH 1199356 ++D D +LI + + M+ I+I H Sbjct: 648 NIDPDNTKLIYETLHRMDCLIILITH 673 Score = 77.4 bits (189), Expect = 3e-12 Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 16/212 (7%) Frame = -2 Query: 1084184 EDAGSIVCSVDTQRCLCAKQLTLRTPDGRVLTRDVNLAVHPAERWLIRGPSGVGKSTLIR 1084005 +D+ + +D + + L + R + D+NL + ++ LI G SG GKST + Sbjct: 468 QDSNENLTELDFIQNIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAK 527 Query: 1084004 ALAGIWPYGSGQVTVPA-----------GGGVLFLSQKNYVPAGTLKAALCYPGTDDAFD 1083858 +L+ ++ + + ++++ + ++ GT+K LC + FD Sbjct: 528 SLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTIKENLCM---GEIFD 584 Query: 1083857 DDVCSNALTACRLERYAGSL-----YEVSRWGHRLSPGEQQRLAFARVLLQRPDFLLLDE 1083693 + NA + + +L Y++S G LS G++QRLA AR +L +P L+LDE Sbjct: 585 QNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDE 644 Query: 1083692 STSALDPEMESGLYQTVIDRLPDMAMVSIAHH 1083597 S S +DP+ +Y+T+ D ++ I H+ Sbjct: 645 SLSNIDPDNTKLIYETL--HRMDCLIILITHN 674 Score = 68.2 bits (165), Expect = 2e-09 Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 8/215 (3%) Frame = -3 Query: 1186006 DIAPNARANDVLLSLRDVHLSYVDTP---VLKGIDLAVRRGEAVSIIGPSGSGKSTILRC 1185836 D N D + +++ V+L+ P +++ I+L + R + V IIG SG+GKST + Sbjct: 469 DSNENLTELDFIQNIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKS 528 Query: 1185835 INGLIAPQRGEIHVDGIDVRAQKTDPQRIALRKRIGFVFQQYNLFPHLSVLENLTIAPMR 1185656 ++ L I+++G+D+ +++RKRI ++ + LF ++ ENL + Sbjct: 529 LSKLYKVPDKSIYLNGLDINRY----DHLSIRKRIVYIDENPFLFKG-TIKENLCMG--E 581 Query: 1185655 VLGRSRAEAE---SDAHALLAKV--RLADKADAHPGALSGGQQQRVAIARTLAMRPDLIL 1185491 + ++ E S H + + + + K + LS GQ+QR+A+AR + +P +++ Sbjct: 582 IFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLI 641 Query: 1185490 FDEVTSALDPETVGEVLNVIGELADEGQTCVLVTH 1185386 DE S +DP+ + + + +L+TH Sbjct: 642 LDESLSNIDPDNTKLIYETLHRM---DCLIILITH 673 Score = 66.6 bits (161), Expect = 5e-09 Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 1/211 (0%) Frame = -2 Query: 1158326 RIALTDVSLRLQAGDFAVVVGGNGAGKSTFLNLLAGEV-IPDSGVIAIDGKEITALPTHQ 1158150 R + D++L L D +++G +G GKSTF L+ +PD + ++G +I Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIY-LNGLDINRYDHLS 554 Query: 1158149 RAKYISRVFQDPSIGTATALSLEENLAVANXXXXXXXXXXXXXRAQSDAFRERMASFDLG 1157970 K I + ++P + T ++ENL + E + + D Sbjct: 555 IRKRIVYIDENPFLFKGT---IKENLCMGEIFDQNEIENACIM----SQCHEFICNLDKQ 607 Query: 1157969 LEKRMKAKASLLSGGQRQALSLLMAVLQRPQLLLLDEHTAALDPRTAAIVMRVTEQVVRE 1157790 ++ S LS GQ+Q L+L A+L +PQ+L+LDE + +DP ++ + + Sbjct: 608 YSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIY----ETLHR 663 Query: 1157789 AGLTTLMVTHNMQHALDYGNRLVMMRDGRIV 1157697 +++THN Y +LV R+ RI+ Sbjct: 664 MDCLIILITHNDPSNFKYNKKLV-FRNNRII 693 Score = 66.2 bits (160), Expect = 6e-09 Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 8/226 (3%) Frame = +2 Query: 584534 DLGNVNVAYGRRP---VIHNMHLKVGEGEAVSVLGPNGAGKTTLLRAISGMIPVKTGSIR 584704 ++ VN+ G P ++ +++L + + V ++G +G GK+T +++S + V SI Sbjct: 482 NIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIY 541 Query: 584705 LNSQELANASPNAVARHGVMHVAEGRRLFGNMTCRENLMLG-----GYMRSGPAVNQDFR 584869 LN ++ N + R ++++ E LF T +ENL +G + + ++Q Sbjct: 542 LNGLDI-NRYDHLSIRKRIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHE 599 Query: 584870 RLLDVFPEIEPKLDVRAGALSGGQQQMLAIARGLMSRPKILMLDEPTIGLSPLVVQRLKT 585049 + ++ + KL LS GQ+Q LA+AR ++ +P++L+LDE + P K Sbjct: 600 FICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKL 656 Query: 585050 VLTSSAREFFGSLLLVEQDLSLALAVTSRVYVIRNGRIVHEGAVQN 585187 + + R +L+ D S ++ V RN RI+ +N Sbjct: 657 IYETLHRMDCLIILITHNDPS--NFKYNKKLVFRNNRIIESSYSEN 700 Score = 62.0 bits (149), Expect = 1e-07 Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 7/203 (3%) Frame = +2 Query: 805061 DAMIEITNVHKSFGAVP---VLKGISLNVRQGEVVCLIGASGSGKSTLLRCINALESYDE 805231 D + I V+ + GA P +++ I+L + + + V +IG SG+GKST + ++ L + Sbjct: 478 DFIQNIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPD 537 Query: 805232 GEIRLLGQPVEQRARNINQLRTQVGMVFQRFNLFPHR-TALENVMEGPVHVKR-MPRADA 805405 I L G + + + L + +V+ N F + T EN+ G + + + A Sbjct: 538 KSIYLNGLDINR----YDHLSIRKRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACI 593 Query: 805406 QREASELLMKVG--LGHKLHAYPNQLSGGQQQRVAIARSLAMKPKAILFDEPTSALDPEL 805579 + E + + +KL + LS GQ+QR+A+AR++ +P+ ++ DE S +DP+ Sbjct: 594 MSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD- 652 Query: 805580 VGEVLGVMRTLAREGMTMLVVTH 805648 + TL R ++++TH Sbjct: 653 --NTKLIYETLHRMDCLIILITH 673 Score = 62.0 bits (149), Expect = 1e-07 Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 7/217 (3%) Frame = -2 Query: 1377497 VLRKLSMTVANGEAVAVLGKNGMGKTTLLKTIMGYLPKKGGAIHVHGRDITRLPPHQIAR 1377318 ++ +++ + + V ++G++G GK+T K++ +I+++G DI R H R Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYD-HLSIR 556 Query: 1377317 AGIAYAPQEHALFQDLSIRDNLRLG-------LSNVSVFEERFAGIEPVFPVFKSRLRQY 1377159 I Y + LF+ +I++NL +G + N + + I + + +L + Sbjct: 557 KRIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSEN 615 Query: 1377158 AGTLSGGEQKMLLVARALMTRPSIILLDEITEGLQPSVIDRLADALLWERKQHGTTLLLI 1376979 LS G+++ L +ARA++ +P +++LDE + P + + L + ++LI Sbjct: 616 GSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL----HRMDCLIILI 671 Query: 1376978 EQNVPFALKVADRYAVLKQGEVIEHGNAKDETAETSI 1376868 N P K ++ V + +IE ++ E E SI Sbjct: 672 THNDPSNFKY-NKKLVFRNNRIIE--SSYSENKEYSI 705 Score = 60.5 bits (145), Expect = 4e-07 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 1/190 (0%) Frame = +2 Query: 817697 PNKVILNDVDLVIGRGQTVGVIGESGSGKTTLAKVIAGLVPMARGTLLLDGKPLAADLRR 817876 P + I+ D++L++ R V +IGESG+GK+T AK ++ L + ++ L+G D+ R Sbjct: 494 PMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNG----LDINR 549 Query: 817877 RSREQFRCIHIVFQNADTALNPTHTVERTLARPLKFYHGMKGDAAKRRVAELL-NLVRLP 818053 R IV+ + + L E + + ++ + E + NL + Sbjct: 550 YDHLSIR-KRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQY 608 Query: 818054 AELAQRRTGELSGGQKQRVNLARALAAEPQLILCDEVTSALDTVVGAAILELLRDLQKKL 818233 + LS GQKQR+ LARA+ +PQ+++ DE S +D I E L ++ Sbjct: 609 SYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLH----RM 664 Query: 818234 GVSYLFITHD 818263 + ITH+ Sbjct: 665 DCLIILITHN 674 Score = 58.5 bits (140), Expect = 1e-06 Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 4/216 (1%) Frame = +2 Query: 420659 VLDDVSLAFPSGSVTVILGQSGSGKSTLLRSINHLERVDDGFIDIDGELVGYRREGRTLY 420838 +++D++L +I+G+SG+GKST +S++ L +V D I ++G Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNG------------L 545 Query: 420839 ELKEKDILERRRADVGMVFQSFNLFPHLTVLENVVEAPXXXXXXXXXXXXXXXXXXXXVG 421018 ++ D L R+ V + F LF T+ EN+ Sbjct: 546 DINRYDHLSIRKRIVYIDENPF-LFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICN 603 Query: 421019 L----TGKADAWPRQLSGGQQQRVAIARALALKPKVLLFDEPTSALDPELVNEVLDVIRQ 421186 L + K LS GQ+QR+A+ARA+ +P+VL+ DE S +DP+ + + Sbjct: 604 LDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYET--- 660 Query: 421187 LARSGTTLIIVTHEIGFAREVADTIVFMDGGRIIES 421294 L R +I++TH + +VF + RIIES Sbjct: 661 LHRMDCLIILITHNDPSNFKYNKKLVFRN-NRIIES 695 Score = 58.2 bits (139), Expect = 2e-06 Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 4/178 (2%) Frame = +1 Query: 111124 VSLEVPRGEIVSLLGGNASGKSTAMKIILGLHRPRSGTIRFDGRAINGLLTPQIVRLGIA 111303 ++L + R + V ++G + +GKST K + L++ +I +G IN +R I Sbjct: 502 INLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRY-DHLSIRKRIV 560 Query: 111304 SVPEARRLFGDMTVRENLLMGA-FTRRDREG---IAQDYERMLALFPRVKERLAQRAGTL 111471 + E LF T++ENL MG F + + E ++Q +E + L + +L++ L Sbjct: 561 YIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNL 619 Query: 111472 SGGEQQMLAMARALMSRPALVCMDEPTMGLSPLYVDKVLDLIRTVNQQGVTFFMVEQN 111645 S G++Q LA+ARA++ +P ++ +DE + P D + T+++ ++ N Sbjct: 620 STGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKLIYETLHRMDCLIILITHN 674 Score = 57.8 bits (138), Expect = 2e-06 Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 11/182 (6%) Frame = -1 Query: 1308354 PIRKSGRPILADDGILLDAQGISAGYG---LSRVLFDVDLQVPRVGGVTILGRNGAGKTT 1308184 P+++ L + + + + ++ G + ++ D++L + R V I+G +G GK+T Sbjct: 465 PVQQDSNENLTELDFIQNIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKST 524 Query: 1308183 LLKTLVGELPFQGGSVELAGLPLSGLRTHERIKSGIGYVPQEGGVFAGLSVQENLELGIA 1308004 K+L S+ L GL ++ H I+ I Y+ + +F G +++ENL +G Sbjct: 525 FAKSLSKLYKVPDKSIYLNGLDINRY-DHLSIRKRIVYIDENPFLFKG-TIKENLCMGEI 582 Query: 1308003 RQRRHGDIALAFAWFPKL--------QQRLKQTAGTLSGGERKMLAIARALLGAPRILLL 1307848 + + A + + +L + LS G+++ LA+ARA+L P++L+L Sbjct: 583 FDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLIL 642 Query: 1307847 DE 1307842 DE Sbjct: 643 DE 644 Score = 57.0 bits (136), Expect = 4e-06 Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 10/185 (5%) Frame = +3 Query: 259899 RRVLDDIDLNVARGEFVGILGASGCGKSTLLRLIAGLDRDYGGDILMHG---ERVAGTDL 260069 R +++DI+L + R + V I+G SG GKST + ++ L + I ++G R + Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI 555 Query: 260070 RRGIVFQDHRLLPWL---SVERNIALGLMNAPGTKAQKAQAVREHIALVQLEGYEAARPH 260240 R+ IV+ D P+L +++ N+ +G + + H + L+ + + Sbjct: 556 RKRIVYIDEN--PFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLS 613 Query: 260241 Q----LSGGMAQRVAIARALINRPELLVLDEPFGALDAMTRSYLQRSLAYIWASEQATMV 260408 + LS G QR+A+ARA++++P++L+LDE +D + +L + ++ Sbjct: 614 ENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM----DCLII 669 Query: 260409 LVTHD 260423 L+TH+ Sbjct: 670 LITHN 674 Score = 55.5 bits (132), Expect = 1e-05 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 22/210 (10%) Frame = +3 Query: 1015833 RVVIDALDLDIREGEFVALLGESGCGKTTLLRALA-------------GLDLPDAGQIRA 1015973 R +++ ++L + + V ++GESG GK+T ++L+ GLD+ + Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI 555 Query: 1015974 PERPSVVFQEHRLLPWATLWENVALGHETTVGRAGAARALAEVG---------LSGREDD 1016126 +R V E+ L T+ EN+ +G A +++ S + + Sbjct: 556 RKR-IVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 1016127 WPRNLSGGQAQRVALARGLARDPALLLLDEPFAALDALTRIKMHGLVKELVARHHPGVLL 1016306 NLS GQ QR+ALAR + P +L+LDE + +D L+ E + R ++L Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP----DNTKLIYETLHRMDCLIIL 670 Query: 1016307 VTHDVDEALTLADRILVMRSGRIAASFQPE 1016396 +TH+ D + ++ LV R+ RI S E Sbjct: 671 ITHN-DPSNFKYNKKLVFRNNRIIESSYSE 699 Score = 53.9 bits (128), Expect = 3e-05 Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 9/193 (4%) Frame = -3 Query: 214678 LVGESGSGKSTILRALTGLAPLAGGHMKIGSHGPGEKIDRSFRRDVQMVFQDPYGSLHPR 214499 ++GESG+GKST ++L+ L + + + S R+ + + ++P Sbjct: 514 IIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENP------- 566 Query: 214498 FTVDRALREPLTINGIDRQDER----IVDALREV--GLGPAYRFRYPHQ---LSGGQRQR 214346 F ++E L + I Q+E I+ E L Y ++ LS GQ+QR Sbjct: 567 FLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQR 626 Query: 214345 VAIARALIVEPRVLLLDEPTSALDVSVQAEIXXXXXXXXXXXXLTMILVSHNLAVVGFLC 214166 +A+ARA++ +P+VL+LDE S +D + +IL++HN F Sbjct: 627 LALARAILHQPQVLILDESLSNID----PDNTKLIYETLHRMDCLIILITHN-DPSNFKY 681 Query: 214165 SRVAVMRNGEIVE 214127 ++ V RN I+E Sbjct: 682 NKKLVFRNNRIIE 694 Score = 53.5 bits (127), Expect = 4e-05 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 11/227 (4%) Frame = -1 Query: 1217610 VLKGIDFQVQAREVVCLIGPSGSGKSTFLRCINHLEHIDGGALYVDGELVGYRRRGDYLR 1217431 +++ I+ + ++ V +IG SG+GKSTF + ++ L + ++Y++G + R D+L Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDIN---RYDHLS 554 Query: 1217430 ELRESEIAAKRAQTGMVFQRFNLFAHM-TALQNVMEAPIQVLRRPRREATEAAVAXXXXX 1217254 + +V+ N F T +N+ I + E A + Sbjct: 555 IRKR-----------IVYIDENPFLFKGTIKENLCMGEIF----DQNEIENACIMSQCHE 599 Query: 1217253 XXXXXXGYYPHELSG-------GQQQRVAIARALAMQPKLMLFDEPTSALDPE---LVGE 1217104 Y ++LS GQ+QR+A+ARA+ QP++++ DE S +DP+ L+ E Sbjct: 600 FICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYE 659 Query: 1217103 VLDVMRDLATGGMTMIVVTHEMRFARDVADRVVFMDNGTVVETGHPE 1216963 L M L +I++TH ++VF +N ++E+ + E Sbjct: 660 TLHRMDCL------IILITHNDPSNFKYNKKLVFRNN-RIIESSYSE 699 Score = 53.5 bits (127), Expect = 4e-05 Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 6/196 (3%) Frame = -1 Query: 1395825 ILDGVDLSVARGETVCVLGPSGSGKSTLLRCLNWLSPPDDGAIWIGDERIGMRENANGSI 1395646 I++ ++L + R + V ++G SG+GKST + L+ L D +I++ G+ N + Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLN----GLDINRYDHL 553 Query: 1395645 SPRPDREIRTQRSRIGMVFQSFNLWPHMTVLENVMEG-LLSVKRMSRLAASDLAVEALRQ 1395469 S R RI + ++ L+ T+ EN+ G + + E + Sbjct: 554 SIR---------KRIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICN 603 Query: 1395468 VG--LSGKHTAMPANLSGGQQQRVGIARTLAMTPEVILFDEPTSALDPE---LVGEVLGV 1395304 + S K + +NLS GQ+QR+ +AR + P+V++ DE S +DP+ L+ E L Sbjct: 604 LDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHR 663 Query: 1395303 MRGLAAKDTTMIVVTH 1395256 M D +I++TH Sbjct: 664 M------DCLIILITH 673 Score = 53.5 bits (127), Expect = 4e-05 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 5/145 (3%) Frame = +2 Query: 517607 ETVALVGRNGAGKSTALRALMGLLPCRRGRRLIDGMDGSLLGPEAVNRLGVAYVPEDRQV 517786 + V ++G +G GKST ++L L ++G+D + ++ R + Y+ E+ + Sbjct: 510 DKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI-RKRIVYIDENPFL 568 Query: 517787 FSNLTVEENLRIASF-----VRRRCDAPQWRLDEIWELFPRLFERRSARGQTLSGGEQQM 517951 F T++ENL + + C Q + I L + + S G LS G++Q Sbjct: 569 FKG-TIKENLCMGEIFDQNEIENACIMSQCH-EFICNLDKQYSYKLSENGSNLSTGQKQR 626 Query: 517952 LALGRALLCNPRVILLDEPTEGLAP 518026 LAL RA+L P+V++LDE + P Sbjct: 627 LALARAILHQPQVLILDESLSNIDP 651 Score = 51.6 bits (122), Expect = 2e-04 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 8/166 (4%) Frame = -2 Query: 973925 ILGRNGAGKSTTLKAIMGIIRKKSGSIRFNGQELIDKRVFDVARHGIAFCPEERGIFSSL 973746 I+G +G GKST K++ + + SI NG + I++ R I + E +F Sbjct: 514 IIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLD-INRYDHLSIRKRIVYIDENPFLFKG- 571 Query: 973745 TVEENLGLPPVIRAGGMP----VAEIHALFPNLIE----RRKAQGTQLSGGEQQMLAIGR 973590 T++ENL + + + +++ H NL + + G+ LS G++Q LA+ R Sbjct: 572 TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALAR 631 Query: 973589 ILHTGARLLLLDEPTEGLAPVIVKRIGEIIRTLKRRGFTIVLVEQN 973452 + ++L+LDE + P K I E TL R I+L+ N Sbjct: 632 AILHQPQVLILDESLSNIDPDNTKLIYE---TLHRMDCLIILITHN 674 Score = 48.9 bits (115), Expect = 0.001 Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%) Frame = -3 Query: 144934 VLDDITLRVRPGEFISVLGASGCGKSTLLRLIAGLDTDYSGDIFVAG---ERVRDTSLQR 144764 +++DI L + + + ++G SG GKST + ++ L I++ G R S+++ Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 144763 GIVFQDHRLFPWL-TASQNILAA-------LRNAPLTAKQKRDAVAEHIALVGLAGFENA 144608 IV+ D F + T +N+ + NA + + Q + + EN Sbjct: 558 RIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMS-QCHEFICNLDKQYSYKLSENG 616 Query: 144607 YPNQLSGGMAQRVAIARGLVNRPRVLLLDEPFGALDALTRGRLQNELQRIWEQERITMIL 144428 + LS G QR+A+AR ++++P+VL+LDE +D + L R+ +IL Sbjct: 617 --SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM----DCLIIL 670 Query: 144427 VTHD 144416 +TH+ Sbjct: 671 ITHN 674 Score = 48.1 bits (113), Expect = 0.002 Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 9/185 (4%) Frame = -1 Query: 1290471 VVSGIDLEVPQGALLSLLGPSGCGKTTLLRMIAGLLEPSSGDILFRGKSVK---DVPVHK 1290301 +V I+L + + + ++G SG GK+T + ++ L + I G + + + K Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 1290300 RGVGMLFQDYALFPHMTVESNVRFGLEMRMRDRRRHQALVLEALDMV-----QLAHLAER 1290136 R V + ++ LF T++ N+ G E+ ++ + ++ + + + Q ++ Sbjct: 558 RIV-YIDENPFLFKG-TIKENLCMG-EIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 1290135 FPQELSGGQRQRVALARAIVTEPAFLLLDEPFGALD-KNLRLEMQIQLREIQTKLKITTV 1289959 LS GQ+QR+ALARAI+ +P L+LDE +D N +L + E ++ + Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKL-----IYETLHRMDCLII 669 Query: 1289958 MVTHD 1289944 ++TH+ Sbjct: 670 LITHN 674 Score = 47.8 bits (112), Expect = 0.002 Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 19/191 (9%) Frame = +2 Query: 169535 DVSFDVYGGDRFVLLGPSGCGKSTLLKAVAGFIQPTSGSISLDGQHVRGPGADRIVVFQE 169714 D++ + D+ +++G SG GKST K+++ + SI L+G + Sbjct: 501 DINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDIN-----------R 549 Query: 169715 FDQLPPWKTVL----QNVVFPLRVAKKLSRAEARERALHYLEKVGLASFANAY------- 169861 +D L K ++ +F + + L E ++ + +E + S + + Sbjct: 550 YDHLSIRKRIVYIDENPFLFKGTIKENLCMGEIFDQ--NEIENACIMSQCHEFICNLDKQ 607 Query: 169862 --------PHTLSGGMKQRVAIARALAMQPRVLLMDEPFAALDALTRRKMQEELLRLWEE 170017 LS G KQR+A+ARA+ QP+VL++DE + +D + + E L R+ Sbjct: 608 YSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM--- 664 Query: 170018 VNFTLLFVTHS 170050 + ++ +TH+ Sbjct: 665 -DCLIILITHN 674 Score = 47.4 bits (111), Expect = 0.003 Identities = 48/224 (21%), Positives = 97/224 (43%), Gaps = 6/224 (2%) Frame = +3 Query: 73302 VLDELSLDVMPGEKLALIGPSGSGKTTILRILMTLESIDGGHVEIDGEQLFHMQQGGRTV 73481 ++++++L + +K+ +IG SG+GK+T + L L + + ++G + Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYD------ 551 Query: 73482 PANERHLQMMRGKVGMVFQHFNLFPHK-SVLDNVTLAPILTKGESRETAEKRALELLDMV 73658 HL + + +V+ N F K ++ +N+ + I + E + + + Sbjct: 552 -----HLSIRK---RIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMS--QCHEFI 601 Query: 73659 GMADKAKS-----RPAQLSGGQKQRVXXXXXXXXXXXXMLFDEVTSALDPELVEEVLNVM 73823 DK S + LS GQKQR+ ++ DE S +DP+ + + + Sbjct: 602 CNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL 661 Query: 73824 HRLARETDMTMLLVTHEMGFAHDFADRVLFFDRGRIVEEGKPED 73955 HR+ D ++L+TH + ++ L F RI+E E+ Sbjct: 662 HRM----DCLIILITHNDPSNFKY-NKKLVFRNNRIIESSYSEN 700 Score = 47.4 bits (111), Expect = 0.003 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%) Frame = +3 Query: 1034961 VTIVGANGAGKSTLLNALMGTMPCKGEMLYEGQSLHGSSIEE----RVFRGISLVPETRE 1035128 V I+G +G GKST +L + +Y L+G I + + I + E Sbjct: 512 VLIIGESGTGKSTFAKSLSKLYKVPDKSIY----LNGLDINRYDHLSIRKRIVYIDENPF 567 Query: 1035129 LFPDMSVYDNLALGAFTSYVRGERNLAQQIGPVFERFPRLRE----RRNQNAMTLSGGER 1035296 LF ++ +NL +G + + E A + E L + + ++N LS G++ Sbjct: 568 LFKG-TIKENLCMGEI--FDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQK 624 Query: 1035297 QMLALGRALLSRPRLLMLDEPSLGLAPLIVKDIFEMI 1035407 Q LAL RA+L +P++L+LDE + P K I+E + Sbjct: 625 QRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL 661 Score = 46.6 bits (109), Expect = 0.005 Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 1/217 (0%) Frame = -3 Query: 1387519 VLKDVSLDVAAGKVVCLIGPSGAGKSTLLRCLNHL-EVPDSGHVSIGGEMIGFRLAGSTL 1387343 +++D++L + V +IG SG GKST + L+ L +VPD G ++ + Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDI-------NRY 550 Query: 1387342 RHAPEREICAMRSDVGMVFQGFNLFEHLTAAENIMLXXXXXXXXXXXXXXXXXXRLLGRV 1387163 H R+ + +F+G + E+L E + L + Sbjct: 551 DHLSIRKRIVYIDENPFLFKG-TIKENLCMGE--IFDQNEIENACIMSQCHEFICNLDKQ 607 Query: 1387162 GLGSKADRYPKQLSGGEQQRVAIARALAMDPKVMLFDEATSALDPERVGEVLAVMRELAR 1386983 K LS G++QR+A+ARA+ P+V++ DE+ S +DP+ + L R Sbjct: 608 -YSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD---NTKLIYETLHR 663 Query: 1386982 DGMTMICVTHEMSFAREVSDEVIFMADGRIVEQGPPE 1386872 +I +TH + + +++F + RI+E E Sbjct: 664 MDCLIILITHNDPSNFKYNKKLVF-RNNRIIESSYSE 699 Score = 46.6 bits (109), Expect = 0.005 Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 3/193 (1%) Frame = +1 Query: 156202 VRGLNFEVAQGETLALVGESGCGKSATALSLMRLVPAPAQVTGSVCFDGRELLDLSAPEI 156381 V +N + + + + ++GESG GKS A SL +L P + S+ +G LD++ + Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDK---SIYLNG---LDINRYDH 552 Query: 156382 RAVRGRQISMIFQEPMT---SLNPVLSIGAQIVETLRQHERLSKAAAWKRAIELLELVRI 156552 ++R ++I I + P ++ L +G E Q+E + A + E + + Sbjct: 553 LSIR-KRIVYIDENPFLFKGTIKENLCMG----EIFDQNE-IENACIMSQCHEFICNLD- 605 Query: 156553 PEPQRRVFDYPHELSGGQRQRVMIAMAVACRPRLLIADEPTTALDVTIQARILELLDGLR 156732 + ++ + LS GQ+QR+ +A A+ +P++LI DE + +D I E L Sbjct: 606 KQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL---- 661 Query: 156733 RELSMSLLLITHD 156771 + ++LITH+ Sbjct: 662 HRMDCLIILITHN 674 Score = 43.5 bits (101), Expect = 0.045 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 1/174 (0%) Frame = +3 Query: 516864 IALIGPNGAGKSTLMNVMSGLLSPTAGSIRLHDRDVTSSSPSKLARLGVARSFQNISLFA 517043 + +IG +G GKST +S L SI L+ D+ + R + +N LF Sbjct: 512 VLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI-RKRIVYIDENPFLFK 570 Query: 517044 SMTVYENLRLAVQRQLFDIAPFWKPVAGYRRLNEATDLALERSHLTTHRNRLAAELSHGQ 517223 T+ ENL + ++FD + +L + S+ + + LS GQ Sbjct: 571 G-TIKENLCMG---EIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENG---SNLSTGQ 623 Query: 517224 QRALDLGMTLIGDPKILLLDEPLAGVGHDDLD-FFLTLLRKVCSNRTVLLVEHN 517382 ++ L L ++ P++L+LDE L+ + D+ + TL R C ++L+ HN Sbjct: 624 KQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMDC---LIILITHN 674 Score = 43.1 bits (100), Expect = 0.058 Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 10/189 (5%) Frame = -3 Query: 963010 PALTVFGGIDMHIPAGQLVALVGPSGCGKSTLLNMIAGLDRPSGGAIRFGAAGATHEPAL 962831 P + I++ + V ++G SG GKST ++ L + +I L Sbjct: 494 PMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHL 553 Query: 962830 SVVFQQPRLIDWLPVEQNVSIAFDRVGGVAGDRDAVTQDLLAK-----VGLLAQRRSYP- 962669 S+ ++ ID P +I + G D++ + + + L ++ SY Sbjct: 554 SIR-KRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKL 612 Query: 962668 ----QFLSGGQKQRVAIARAFAVRPDVLLLDEPFSALDELTARKLRELLQDMWLGAEGER 962501 LS GQKQR+A+ARA +P VL+LDE S +D + + E L M Sbjct: 613 SENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM-------D 665 Query: 962500 PTGVLVTHN 962474 +L+THN Sbjct: 666 CLIILITHN 674 Score = 42.0 bits (97), Expect = 0.13 Identities = 22/57 (38%), Positives = 36/57 (63%) Frame = -3 Query: 824995 GQQQRVAIARALVVSPKVFLLDEPLSNLDARLRHDVRQEIRGLQQRLGLTTLMVTHD 824825 GQ+QR+A+ARA++ P+V +LDE LSN+D D + I R+ +++TH+ Sbjct: 622 GQKQRLALARAILHQPQVLILDESLSNIDP----DNTKLIYETLHRMDCLIILITHN 674 >ref|NP_958229.1|gene 55 protein Length = 306 Score = 179 bits (453), Expect = 7e-43 Identities = 100/256 (39%), Positives = 138/256 (53%) Frame = -3 Query: 706597 PVKFAWIDTQCRQYPVLALCEVLGVSVNGYRAWKRGGTPERQRLTDAQLLTLIRTIHAEV 706418 P +F+ I YPV+ LC V GV + YR WK PE+ A L + + +H Sbjct: 13 PEQFSIIGKLRAHYPVVTLCHVFGVHRSSYRYWKN--RPEKPDGRRAVLRSQVLELHGIS 70 Query: 706417 KGAYGSPRMTEEIRSRGFPASKARVERLMSANGIRACHKRRYRVTTDSRHKLPVAPNVLN 706238 G+ G+ + RG+ + RLM G+ +C + +R H+ PN L Sbjct: 71 HGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGG-HEHVAIPNYLE 129 Query: 706237 RNFAPAGPNQLFTSDITYIWTDEGWLYLAVTLDLFNREVVGWSVKPRMTTELVIDALTMA 706058 R FA PNQ++ D+TYIWT + W YLAV LDLF R+ VGW++ + L + AL MA Sbjct: 130 RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMA 189 Query: 706057 WLRRRPAPGALHHSDRGSQYASHDFQRKLNSYGMQCSMSRKGSCWDNAPTESFFNSLKNE 705878 W R G + HSD+GS Y S F++ L Y ++ SMSR+G+CWDN+P E FF SLKNE Sbjct: 190 WETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNE 249 Query: 705877 RVHGTRYRTQREAVHA 705830 + Y + EA HA Sbjct: 250 WMPVVGYVSFSEAAHA 265 Score = 76.6 bits (187), Expect = 5e-12 Identities = 65/238 (27%), Positives = 97/238 (40%), Gaps = 1/238 (0%) Frame = +2 Query: 837524 EKTMLIDALKQTYXXXXXXXXXXXXRSSYFYHRARLSVXXXXXXXXXXXXXXFE-LNHRC 837700 E+ +I L+ Y RSSY Y + R ++H Sbjct: 14 EQFSIIGKLRAHYPVVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGS 73 Query: 837701 YGYRRIRAALIRQQVFISEKVVRRLMRQEGLAAATTKRRRYGFYRGEISPAPENIINRDF 837880 G R I R+ + + RLM++ GL + RY G A N + R F Sbjct: 74 AGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYK-RGGHEHVAIPNYLERQF 132 Query: 837881 YAAVPNQKWLTDLTEFQIPAGKVYLSPVIDCFDGLVVSWSIGTRPDAELVNTMLDSAIES 838060 PNQ W D+T YL+ V+D F V W++ PD+ L L+ A E+ Sbjct: 133 AVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWET 192 Query: 838061 MAGCMERPVVHSDRGAHYRWPGWLSHMQAARLTRSMSRKGCSPDNAACEGFFGRLKTD 838234 G + HSD+G+HY + + ++ +SMSR+G DN+ E FF LK + Sbjct: 193 -RGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNE 249 Score = 61.6 bits (148), Expect = 2e-07 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Frame = -1 Query: 1256583 ESAQYCSGEFQGALKDWKMRSSMSRKGNCWDNAPTESFWGRLKTASVHGHKFTTREQAKQ 1256404 + + Y S +F+ L +++R SMSR+GNCWDN+P E F+ LK + + + +A Sbjct: 205 QGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAH 264 Query: 1256403 AVMDW-MAFYNHRRLHSSLGYLSPMQFEQRWYEAQRKKAA 1256287 A+ D+ + +Y+ R H G L P + E R+++ A+ Sbjct: 265 AITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVAS 304 Score = 57.0 bits (136), Expect = 4e-06 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Frame = -1 Query: 534138 KPYERHPR--HRSGARPILVHRHFSVAAPNVLWVADATYILTGEGFLYLAVVLDVFSRCI 533965 +P R+ R H A P + R F+V PN +W D TYI TG+ + YLAVVLD+F+R Sbjct: 109 QPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKP 168 Query: 533964 VGCPIAHAP 533938 VG ++ +P Sbjct: 169 VGWAMSFSP 177 Score = 45.8 bits (107), Expect = 0.009 Identities = 37/125 (29%), Positives = 52/125 (41%) Frame = -1 Query: 1214433 RLMSRNGTRACHKRRYRVTTDSSHKLPVALNLLTRKGAPAAPNQARSVDLRYVGIDESRR 1214254 RLM G +C + +R H+ N L R+ A PNQ D+ Y+ + Sbjct: 97 RLMKELGLVSCQQPTHRYKR-GGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWA 155 Query: 1214253 HRAVVLDSVNPEVVGWSIKSRVXXXXXXXXXXXAWCYRKPARAALRYSDCGSQCASRGFR 1214074 + AVVLD + VGW++ AW R + +SD GS SR FR Sbjct: 156 YLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQFR 215 Query: 1214073 RKLRR 1214059 + L R Sbjct: 216 QLLWR 220 >ref|NP_061653.1|transposase Length = 328 Score = 153 bits (386), Expect = 4e-35 Identities = 108/322 (33%), Positives = 160/322 (49%), Gaps = 3/322 (0%) Frame = -2 Query: 769100 SLRALTLSEREEISRGVSAGLSIRAIAHQLNRAPSTISREIARNGGTGHYRALEADERAL 768921 S LTL+ER I S+R+IA +L R+ STISREI+RN Y+A E ++ Sbjct: 15 SYNHLTLTERARIEVLRQENYSLRSIARKLKRSVSTISREISRNNLNQSYQA-ETAQKNY 73 Query: 768920 QTALRPKHCILKQNRRLRYAVERKLRREWSPEQVSGWLKNRYANDEAMRVSHETIYRSLF 768741 +T + + L ++ L+ WSPEQ+ G L ++ +TIYR + Sbjct: 74 ETKRKLCGRPTRFTPELGNIIKYYLKCHWSPEQIVGRLLQN-------QICFKTIYRWI- 125 Query: 768740 VQARGVLKKELQYHLRTQRKMRHSRFSSTKGARNKIADAVSIHERPPEVADRAVPGHWEG 768561 ++ EL LR + K + K R K I +RP E+ R GHWE Sbjct: 126 --NSNMINFELISCLRQKGKRQ-----KPKETRGKFNIGRPISQRPKEIKKRNTFGHWEA 178 Query: 768560 DLV---SGASNTHVATLVERRSRFTIIVKVKGKDTVSVVAGLKREVKRLPQHLRKSLTWD 768390 D + G S +AT ER+SR+ V + + + S+ + +K LP+ K++T D Sbjct: 179 DTIVSSRGKSKGCIATFAERKSRYYYCVLMPDRSSNSMETAINNLIKHLPKGAVKTITVD 238 Query: 768389 RDMELANHKDFTIATDVKVYFCDPRSPWQRGTNENTNRLLRQYLPHGTQLDHYSQADLNK 768210 R E + +++ ++ VYF DP S WQRGTNENTN LLR++ P T L +Q LN Sbjct: 239 RGKEFSCYQNIENQFNINVYFADPYSAWQRGTNENTNGLLREFFPKKTDLAKVNQEQLNY 298 Query: 768209 IAARLNERPRKTLGFRSPADKL 768144 +N RPRK L ++ P + L Sbjct: 299 ALDSINYRPRKCLNWKFPYEVL 320 Score = 63.2 bits (152), Expect = 5e-08 Identities = 26/42 (61%), Positives = 34/42 (80%) Frame = -3 Query: 533923 VKVFFADPHSPWQRGTNENTNGLLRQYFPNGTDLSRWSTRNL 533798 + V+FADP+S WQRGTNENTNGLLR++FP TDL++ + L Sbjct: 255 INVYFADPYSAWQRGTNENTNGLLREFFPKKTDLAKVNQEQL 296 >ref|YP_025041.1|putative transposase B Length = 280 Score = 139 bits (350), Expect = 6e-31 Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 5/230 (2%) Frame = -3 Query: 706543 LCEVLGVSVNGYRAWKRGGTPERQRLTDAQLLTLIRTIHAEVKGAYGSPRMTEEIRSRGF 706364 +C +LGVS Y + R P ++R DA L I I AE K YG ++ E+ Sbjct: 1 MCRILGVSRAQYYRY-RSPKPSKRRAEDADLKQRILRIFAEFKQRYGVMKIHHELNLELQ 59 Query: 706363 P----ASKARVERLMSANGIRACHKRRYRVTTDSRHKLPVAPNVLNRNFAPAGPNQLFTS 706196 P S R+ RLM I + +++ + S+ K+ PN+L ++F+ G NQ +T+ Sbjct: 60 PLQLRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQKWTA 119 Query: 706195 DITYIWTDE-GWLYLAVTLDLFNREVVGWSVKPRMTTELVIDALTMAWLRRRPAPGALHH 706019 D+TYI T GW YL+ +DL +R ++G+S +M T+LV+ L A R + H Sbjct: 120 DMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDLIIH 179 Query: 706018 SDRGSQYASHDFQRKLNSYGMQCSMSRKGSCWDNAPTESFFNSLKNERVH 705869 +D GSQY S D+ ++L ++ S SRKG +DNAP ESF SLK E V+ Sbjct: 180 TDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVY 229 Score = 77.4 bits (189), Expect = 3e-12 Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 2/171 (1%) Frame = +2 Query: 837740 QVFISEKVVRRLMRQEGLAAATTKR-RRYGFYRGEISPAPENIINRDFYAAVPNQKWLTD 837916 Q+ S + + RLM++ + + T + + + ++ P N++ +DF NQKW D Sbjct: 62 QLRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRP-NLLKQDFSTTGLNQKWTAD 120 Query: 837917 LTEFQIPA-GKVYLSPVIDCFDGLVVSWSIGTRPDAELVNTMLDSAIESMAGCMERPVVH 838093 +T Q G YLS ++D ++ +S + D +LV L+SA+++ + ++H Sbjct: 121 MTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDL-IIH 179 Query: 838094 SDRGAHYRWPGWLSHMQAARLTRSMSRKGCSPDNAACEGFFGRLKTDLFYP 838246 +D G+ Y + + + S SRKGC DNA E F LK + YP Sbjct: 180 TDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYP 230 Score = 64.3 bits (155), Expect = 2e-08 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Frame = -1 Query: 1256577 AQYCSGEFQGALKDWKMRSSMSRKGNCWDNAPTESFWGRLKTASVHG-HKFTTREQAKQA 1256401 +QY S ++ L + +R S SRKG +DNAP ESF LK V+ F E A Sbjct: 184 SQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAV 243 Query: 1256400 VMDWM-AFYNHRRLHSSLGYLSPMQFE 1256323 + +++ AFYN +R+HSSLGY +P+Q E Sbjct: 244 LFEYVHAFYNRKRIHSSLGYQTPLQVE 270 Score = 44.3 bits (103), Expect = 0.026 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Frame = -2 Query: 1214036 SRKGNGRNSAPTENFRNSLKHERMRGMR-YRMHREATADLFEYIKVF*NRSRRYSSLGLV 1213860 SRKG ++AP E+F SLK E + + + + A A LFEY+ F NR R +SSLG Sbjct: 205 SRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAVLFEYVHAFYNRKRIHSSLGYQ 264 Query: 1213859 SP 1213854 +P Sbjct: 265 TP 266 Score = 41.2 bits (95), Expect = 0.22 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -1 Query: 534099 RPILVHRHFSVAAPNVLWVADATYILT-GEGFLYLAVVLDVFSRCIVG 533959 RP L+ + FS N W AD TYI T G+ YL+ ++D+ SR I+G Sbjct: 100 RPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIG 147 >ref|NP_536395.1|ISBt3 transposase subunit protein Length = 284 Score = 131 bits (329), Expect = 2e-28 Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 2/193 (1%) Frame = -3 Query: 706408 YGSPRMTEEIRSRGFPASKARVERLMSANGIRACHKRRYRVTTDSRHKLPVAPNVLNRNF 706229 YG P++ +++ G ++ V RLM G+R + + TT + P + +NR F Sbjct: 46 YGVPKVWKQMNREGITVARCTVGRLMKLQGLRGAVRGKRVRTTITDVTAPRPLDRVNRQF 105 Query: 706228 APAGPNQLFTSDITYIWTDEGWLYLAVTLDLFNREVVGWSVKPRMTTELVIDALTMAWLR 706049 PNQL+ SD TY+ T +GWLY+A +D+F R +VGW V MTT+ V+DAL A Sbjct: 106 KADRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSSSMTTDFVLDALEQALYA 165 Query: 706048 RRPAPGA--LHHSDRGSQYASHDFQRKLNSYGMQCSMSRKGSCWDNAPTESFFNSLKNER 705875 R+P +HHSDRGSQY S + +L G++ S+ +G +DNA E+ K E Sbjct: 166 RQPGEDGTLIHHSDRGSQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLYKTEL 225 Query: 705874 VHGTRYRTQREAV 705836 +H RE+V Sbjct: 226 IHRRAPWKTRESV 238 Score = 114 bits (284), Expect = 3e-23 Identities = 63/137 (45%), Positives = 86/137 (62%) Frame = +3 Query: 1051884 MPMVPSAYCRHVVRRADPARLPAQARRDAMLRGKTRCVQEGRFEVHGGRKVWRQLACEGF 1052063 M + PS Y RH + DP++ A+A+RD +L+ + + V + +V+G KVW+Q+ EG Sbjct: 1 MRIAPSGYRRHAAQLRDPSKRCARAKRDELLQPEIKRVWQANMQVYGVPKVWKQMNREGI 60 Query: 1052064 QVARCMVERLMKTLDLPGMRRGSFIRTTVSGSPR*CPLDRVQRQFKAERPNTL*VSVLTR 1052243 VARC V RLMK L G RG +RTT++ PLDRV RQFKA+RPN L VS T Sbjct: 61 TVARCTVGRLMKLQGLRGAVRGKRVRTTITDVTAPRPLDRVNRQFKADRPNQLWVSDFTY 120 Query: 1052244 VSIERRFVYVAPISDVF 1052294 VS + ++YVA + DVF Sbjct: 121 VSTWQGWLYVAFVIDVF 137 Score = 84.7 bits (208), Expect = 2e-14 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 1/191 (0%) Frame = +2 Query: 837680 FELNHRCYGYRRIRAALIRQQVFISEKVVRRLMRQEGLAAATTKRRRYGFYRGEISPAPE 837859 ++ N + YG ++ + R+ + ++ V RLM+ +GL A +R +P P Sbjct: 39 WQANMQVYGVPKVWKQMNREGITVARCTVGRLMKLQGLRGAVRGKRVRTTITDVTAPRPL 98 Query: 837860 NIINRDFYAAVPNQKWLTDLTEFQIPAGKVYLSPVIDCFDGLVVSWSIGTRPDAELVNTM 838039 + +NR F A PNQ W++D T G +Y++ VID F +V W + + + V Sbjct: 99 DRVNRQFKADRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSSSMTTDFVLDA 158 Query: 838040 LDSAIESMAGCMERPVV-HSDRGAHYRWPGWLSHMQAARLTRSMSRKGCSPDNAACEGFF 838216 L+ A+ + + ++ HSDRG+ Y + + A + S+ +G S DNA E Sbjct: 159 LEQALYARQPGEDGTLIHHSDRGSQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETIN 218 Query: 838217 GRLKTDLFYPR 838249 G KT+L + R Sbjct: 219 GLYKTELIHRR 229 Score = 64.3 bits (155), Expect = 2e-08 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Frame = -1 Query: 1256577 AQYCSGEFQGALKDWKMRSSMSRKGNCWDNAPTESFWGRLKTASVHGHK-FTTREQAKQA 1256401 +QY S + L + + S+ +G+ +DNA E+ G KT +H + TRE + A Sbjct: 182 SQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLYKTELIHRRAPWKTRESVELA 241 Query: 1256400 VMDWMAFYNHRRLHSSLGYLSPMQFEQRWYEAQRKKA 1256290 ++W+A+YNH RL LGY+ P + E +Y R A Sbjct: 242 TLEWVAWYNHHRLMEPLGYIPPAEAEANYYRQLRNAA 278 Score = 63.9 bits (154), Expect = 3e-08 Identities = 37/70 (52%), Positives = 43/70 (61%) Frame = +1 Query: 1052344 NFMRDAPEQALCERQSAQRDELIHHSDKGVPMRADPLYGSPVRSWPWPSVGSTGDSCDNA 1052523 +F+ DA EQAL RQ + LIHHSD+G + + PSVGS GDS DNA Sbjct: 153 DFVLDALEQALYARQPGEDGTLIHHSDRGSQYVSIRYSERLAEAGIEPSVGSRGDSYDNA 212 Query: 1052524 LAETINGLYK 1052553 LAETINGLYK Sbjct: 213 LAETINGLYK 222 Score = 53.5 bits (127), Expect = 4e-05 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -1 Query: 534087 VHRHFSVAAPNVLWVADATYILTGEGFLYLAVVLDVFSRCIVG 533959 V+R F PN LWV+D TY+ T +G+LY+A V+DVF+R IVG Sbjct: 101 VNRQFKADRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVG 143 >ref|NP_542261.1|unknown Length = 433 Score = 127 bits (318), Expect = 3e-27 Identities = 117/387 (30%), Positives = 172/387 (44%), Gaps = 20/387 (5%) Frame = +1 Query: 433627 DGGGLYLQVSPAGARSWVYRFXXXXXXXXXXXXXXXXVSLADARERAQQCRRQLGCGLDP 433806 DGGGL L V G +SW R+ VSLADAR + + L G DP Sbjct: 23 DGGGLNLFVLSTGTKSWRLRYRFDGKEKTLVIGNYPDVSLADARGEREAAKETLKSGRDP 82 Query: 433807 IEERRKEQAQRAAQLARTKTFDECTTAYIRANRAGWKNEKHVAQWESTLDTYASPVIGKL 433986 ++ E+A Q A TF+ + + + W EKH + +L P+IG++ Sbjct: 83 NVVKKIEKAIGKQQAA--DTFEVLAREWHKLQKPTWV-EKHASDVLDSLVNDVFPIIGQM 139 Query: 433987 PVRDIDTTHIVRVLQPVWEAKP-ETASRVRGRIESVLDWATAHKYREGENPARW-KGHLD 434160 P+RDID ++ VL+ V + ETA R+R RI ++ + A R E+PA +G + Sbjct: 140 PIRDIDAPTVLGVLRLVEQRDAKETARRIRQRISAIFVYGIASG-RASEDPAAVVRGAMA 198 Query: 434161 KIL----PARTKVRKVQHHXXXXXXXXXXXXXXXXXXEGLAARALELVILTAARTNEVIG 434328 + PA T + K + + L L+ LTA R +I Sbjct: 199 PMKKGRQPAITNLDKARE---------MLVATWKTPSHPVTKLGLRLLTLTAVRPGTLIS 249 Query: 434329 ATRSEFD-LDAG--MWTVPAQRMKA--------QRAHRIPLSETALDLVR--RLLDGVQD 434469 +E D +D +W +PA RMK R H IPLS+ A++ + R L G Sbjct: 250 TPWTELDEVDESDPVWVIPAARMKLLLQHKDDETRDHLIPLSKEAMETITVLRSLTGRGP 309 Query: 434470 ELLFPGAKKGKPLSNMAMLTVLRRMKRTDLTV-HGFRSTFRDWAAECTTYPNEMAEMALA 434646 +L G KP+S A+ +L R V HGFRSTF E ++ ++ LA Sbjct: 310 FVLPNGRHAHKPMSENALGYLLNRSGYHHKHVPHGFRSTFSTVMNERYPADRQVIDLMLA 369 Query: 434647 HAVDDKVEAAYRRGDMFQRRRQMMDDW 434727 H DKVE AY R + +RR+++ W Sbjct: 370 HTPKDKVEGAYNRAEHLERRKELAQIW 396 Score = 114 bits (284), Expect = 3e-23 Identities = 120/401 (29%), Positives = 169/401 (42%), Gaps = 28/401 (6%) Frame = +2 Query: 435362 KPGRYCDGGGLYLQVSTARTRSWVYXXXXXXXXXXXXXXXXHAMSLADARETAAQYRKML 435541 K + DGGGL L V + T+SW +SLADAR ++ L Sbjct: 17 KDYKLADGGGLNLFVLSTGTKSWRLRYRFDGKEKTLVIGNYPDVSLADARGEREAAKETL 76 Query: 435542 LEGIDPIESRRAERMLQHAAAAHSRTFDECSRAFIRANRAGWKSEKHAMQWENTLGTYAS 435721 G DP ++ E+ + AA TF+ +R + + + W EKHA ++L Sbjct: 77 KSGRDPNVVKKIEKAIGKQQAAD--TFEVLAREWHKLQKPTWV-EKHASDVLDSLVNDVF 133 Query: 435722 PVIGPLPARDIDTALVVRVLEPIWQ-VKPETASRVRGRIESVLDWATVHRYREGENPARW 435898 P+IG +P RDID V+ VL + Q ETA R+R RI ++ + + R E+PA Sbjct: 134 PIIGQMPIRDIDAPTVLGVLRLVEQRDAKETARRIRQRISAIFVYG-IASGRASEDPA-- 190 Query: 435899 KGHLDKIFPXXXXXXXXXXXXXLPYAQVAAFMNALRAQEGLAAR-----------ALELL 436045 + + A N +A+E L A L LL Sbjct: 191 -------------AVVRGAMAPMKKGRQPAITNLDKAREMLVATWKTPSHPVTKLGLRLL 237 Query: 436046 VLTAARTSEVIGAVRGEFD-LDAA--TWTVSAERMK--------AGRPHRIPLSGPALAL 436192 LTA R +I E D +D + W + A RMK R H IPLS A+ Sbjct: 238 TLTAVRPGTLISTPWTELDEVDESDPVWVIPAARMKLLLQHKDDETRDHLIPLSKEAMET 297 Query: 436193 VRGLLD-GAEGDLVFP-GTRKGRLLSNMAMLTVLRRMKIAGLTV-HGFRSTFRDWAAECT 436363 + L G V P G + +S A+ +L R V HGFRSTF E Sbjct: 298 ITVLRSLTGRGPFVLPNGRHAHKPMSENALGYLLNRSGYHHKHVPHGFRSTFSTVMNE-- 355 Query: 436364 RYP--NEMAEMALAHAVDDKVEAAYRRGDMFQRRKQMMDDW 436480 RYP ++ ++ LAH DKVE AY R + +RRK++ W Sbjct: 356 RYPADRQVIDLMLAHTPKDKVEGAYNRAEHLERRKELAQIW 396 Score = 50.8 bits (120), Expect = 3e-04 Identities = 77/364 (21%), Positives = 147/364 (40%), Gaps = 30/364 (8%) Frame = +2 Query: 1240832 LTKSAIDAAQPQAQPVELRDTLVPGFMCKVTPAGRKVFMLQYRTNAGERRKPAIGLYGEL 1241011 LT I A+ + +L D G V G K + L+YR + G+ + IG Y ++ Sbjct: 4 LTDKQIKNAKKADKDYKLADG--GGLNLFVLSTGTKSWRLRYRFD-GKEKTLVIGNYPDV 60 Query: 1241012 TVEQARSLAQTWLAEVRRGGDPGGDKAEARKAPTVKELCGRF---MSDYSKVRNKPSTQK 1241182 ++ AR + ++ G DP K + KA ++ F ++ K++ +K Sbjct: 61 SLADARGEREAAKETLKSGRDPNVVK-KIEKAIGKQQAADTFEVLAREWHKLQKPTWVEK 119 Query: 1241183 GYQGNID---RNIIPILGRMKVQDVKRPDVATMMKKLESTPMEANHTLAVMRKMFNMAEI 1241353 +D ++ PI+G+M ++D+ P V +++ +E +A T +R+ + + Sbjct: 120 HASDVLDSLVNDVFPIIGQMPIRDIDAPTVLGVLRLVEQ--RDAKETARRIRQRISAIFV 177 Query: 1241354 WGLRTDGTNPCRHIPQYPQGKTTRLITDEEMGK--LFRHLDKVEA------ESSEPPIVT 1241509 +G+ + + + P + + G+ +LDK ++ P+ Sbjct: 178 YGIASGRAS------EDPAAVVRGAMAPMKKGRQPAITNLDKAREMLVATWKTPSHPVTK 231 Query: 1241510 LAIRLQFEFAARRSEILLLEWTWVD-LENRRVAW-------------PDSKTGGMSKPMS 1241647 L +RL A R ++ WT +D ++ W D +T P+S Sbjct: 232 LGLRLLTLTAVRPGTLISTPWTELDEVDESDPVWVIPAARMKLLLQHKDDETRDHLIPLS 291 Query: 1241648 EEAHRLLSTVPRHEG-SLYVLPSLRDPLKHMTNGEHYNGWSRILKAAGVQHVGT-HGIRH 1241821 +EA ++ + G +VLP+ R K M+ N +L +G H HG R Sbjct: 292 KEAMETITVLRSLTGRGPFVLPNGRHAHKPMSE----NALGYLLNRSGYHHKHVPHGFRS 347 Query: 1241822 RSAT 1241833 +T Sbjct: 348 TFST 351 >ref|NP_042035.1|integrase Length = 439 Score = 124 bits (310), Expect = 3e-26 Identities = 106/393 (26%), Positives = 178/393 (45%), Gaps = 23/393 (5%) Frame = +1 Query: 433627 DGGGLYLQVSPAGARSW--VYRFXXXXXXXXXXXXXXXXVSLADARERAQQCRRQLGCGL 433800 DGGGLYL+VS G++ W YR V+LA AR + + ++ L G+ Sbjct: 26 DGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGI 85 Query: 433801 DPIEERRKEQAQRAAQLARTKTFDECTTAYIRANRAGWKNEKHVAQWESTLDTYASPVIG 433980 DP +++ +A+ + TF+ + +N+ W +E H ++ L+ Y P IG Sbjct: 86 DPKVVQKEARAENSGAY----TFEAIAREWHASNKR-W-SEDHRSRVLRYLELYIFPHIG 139 Query: 433981 KLPVRDIDTTHIVRVLQPV-WEAKPETASRVRGRIESVLDWATAHKYREGENPARWKGHL 434157 +R + T+H++ ++ V K + A R++ R+ +++ +A + Y + + G L Sbjct: 140 SSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGAL 199 Query: 434158 DKILPARTKVRKVQHHXXXXXXXXXXXXXXXXXXEG--LAARALELVILTAARTNEVIGA 434331 K +H+ G + A++L +LT R++E+ A Sbjct: 200 S--------TTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVKLSLLTFVRSSELRFA 251 Query: 434332 TRSEFDLDAGMWTVPAQR------------MKAQRAHRIPLSETALDLVRRLLDGVQD-E 434472 EFD D +W +PA+R MK + H +PLS A+ L+ +L D E Sbjct: 252 RWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLNQLKQISGDKE 311 Query: 434473 LLFPGAKKG-KPLSNMAMLTVLRRM---KRTDLTVHGFRSTFRDWAAECTTYPNEMAEMA 434640 LLFPG K +S + + LR M +T++ HGFR+ R E + ++ E Sbjct: 312 LLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQ 371 Query: 434641 LAHAVDDKVEAAY-RRGDMFQRRRQMMDDWAAY 434736 L+H+ + V AAY + RR MM WA Y Sbjct: 372 LSHSERNNVRAAYIHTSEHLDERRLMMQWWADY 404 Score = 107 bits (267), Expect = 3e-21 Identities = 108/400 (27%), Positives = 176/400 (44%), Gaps = 26/400 (6%) Frame = +2 Query: 435362 KPGRYCDGGGLYLQVSTARTRSW--VYXXXXXXXXXXXXXXXXHAMSLADARETAAQYRK 435535 K + DGGGLYL+VS ++ W Y ++LA AR + +K Sbjct: 20 KTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKK 79 Query: 435536 MLLEGIDPIESRRAERMLQHAAAAHSRTFDECSRAFIRANRAGWKSEKHAMQWENTLGTY 435715 +L++GIDP ++ R A + + TF+ +R + +N+ W SE H + L Y Sbjct: 80 LLVQGIDPKVVQKEAR----AENSGAYTFEAIAREWHASNKR-W-SEDHRSRVLRYLELY 133 Query: 435716 ASPVIGPLPARDIDTALVVRVLEPIWQV----KPETASRVRGRIESVLDWATVHRYREGE 435883 P IG R + T+ +L PI +V K + A R++ R+ +++ +A + Y + Sbjct: 134 IFPHIGSSDIRQLKTS---HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSN 190 Query: 435884 NPARWKGHLDKIFPXXXXXXXXXXXXXLPYAQVAAFMNALRAQEG--LAARALELLVLTA 436057 + G L LP ++ F+ L A G + A++L +LT Sbjct: 191 PASDMAGALSTT--------KARHYPALPSSRFPEFLARLAAYRGRVMTRIAVKLSLLTF 242 Query: 436058 ARTSEVIGAVRGEFDLDAATWTVSAER------------MKAGRPHRIPLSGPALALVRG 436201 R+SE+ A EFD D + W + A+R MK H +PLS A+ L+ Sbjct: 243 VRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLNQ 302 Query: 436202 LLD-GAEGDLVFPGTRKG-RLLSNMAMLTVLRRMKIAGLTV---HGFRSTFRDWAAECTR 436366 L + +L+FPG +++S + + LR M T HGFR+ R E Sbjct: 303 LKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGL 362 Query: 436367 YPNEMAEMALAHAVDDKVEAAY-RRGDMFQRRKQMMDDWA 436483 + ++ E L+H+ + V AAY + R+ MM WA Sbjct: 363 WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMMQWWA 402 >ref|NP_859396.1|hypothetical protein Length = 296 Score = 122 bits (305), Expect = 1e-25 Identities = 81/256 (31%), Positives = 127/256 (49%), Gaps = 4/256 (1%) Frame = -3 Query: 706579 IDTQCRQYPVLALCEVLGVSVNGYRAWKRGGTPERQRLTDAQ----LLTLIRTIHAEVKG 706412 +D QY V +C L ++ + Y ++ +R AQ L I+ ++ E Sbjct: 5 LDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQ 64 Query: 706411 AYGSPRMTEEIRSRGFPASKARVERLMSANGIRACHKRRYRVTTDSRHKLPVAPNVLNRN 706232 YG ++ ++ G ++ V RLM+ G+ + + TT SR K A + +NR Sbjct: 65 VYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISR-KAVAAGDRVNRQ 123 Query: 706231 FAPAGPNQLFTSDITYIWTDEGWLYLAVTLDLFNREVVGWSVKPRMTTELVIDALTMAWL 706052 F P+QL+ +D TY+ T +G++Y+A +D+F +VGW V M T V+DAL A Sbjct: 124 FVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALW 183 Query: 706051 RRRPAPGALHHSDRGSQYASHDFQRKLNSYGMQCSMSRKGSCWDNAPTESFFNSLKNERV 705872 RRP+ G +HHSD+GSQY S + +L G+ S G +DNA ES K E + Sbjct: 184 ARRPS-GTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVI 242 Query: 705871 HGTRYRTQREAVHARL 705824 H ++ + E A L Sbjct: 243 HRKSWKNRAEVELATL 258 Score = 99.0 bits (245), Expect = 9e-19 Identities = 61/135 (45%), Positives = 80/135 (59%) Frame = +3 Query: 1051890 MVPSAYCRHVVRRADPARLPAQARRDAMLRGKTRCVQEGRFEVHGGRKVWRQLACEGFQV 1052069 + PS Y +R P + A+A+ D L+ + + V + +V+G RKVWRQL EG +V Sbjct: 23 IAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRV 82 Query: 1052070 ARCMVERLMKTLDLPGMRRGSFIRTTVSGSPR*CPLDRVQRQFKAERPNTL*VSVLTRVS 1052249 ARC V RLM + L G+ RG +RTT+S DRV RQF AERP+ L V+ T VS Sbjct: 83 ARCTVARLMAVMGLAGVLRGKKVRTTISRKAV-AAGDRVNRQFVAERPDQLWVADFTYVS 141 Query: 1052250 IERRFVYVAPISDVF 1052294 + FVYVA I DVF Sbjct: 142 TWQGFVYVAFIIDVF 156 Score = 88.6 bits (218), Expect = 1e-15 Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 1/194 (0%) Frame = +2 Query: 837680 FELNHRCYGYRRIRAALIRQQVFISEKVVRRLMRQEGLAAATT-KRRRYGFYRGEISPAP 837856 ++ NH+ YG R++ L+R+ + ++ V RLM GLA K+ R R ++ Sbjct: 59 YDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGD 118 Query: 837857 ENIINRDFYAAVPNQKWLTDLTEFQIPAGKVYLSPVIDCFDGLVVSWSIGTRPDAELVNT 838036 +NR F A P+Q W+ D T G VY++ +ID F G +V W + + + V Sbjct: 119 R--VNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLD 176 Query: 838037 MLDSAIESMAGCMERPVVHSDRGAHYRWPGWLSHMQAARLTRSMSRKGCSPDNAACEGFF 838216 L+ A+ A + HSD+G+ Y + ++ A L S G S DNA E Sbjct: 177 ALEQAL--WARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESIN 234 Query: 838217 GRLKTDLFYPRDWR 838258 G K ++ + + W+ Sbjct: 235 GLYKAEVIHRKSWK 248 Score = 56.2 bits (134), Expect = 7e-06 Identities = 28/91 (30%), Positives = 48/91 (52%) Frame = -1 Query: 1256583 ESAQYCSGEFQGALKDWKMRSSMSRKGNCWDNAPTESFWGRLKTASVHGHKFTTREQAKQ 1256404 + +QY S + LK+ + +S G+ +DNA ES G K +H + R + + Sbjct: 196 KGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVEL 255 Query: 1256403 AVMDWMAFYNHRRLHSSLGYLSPMQFEQRWY 1256311 A + W+ +YN+RRL LG+ P + E+ +Y Sbjct: 256 ATLTWVDWYNNRRLLGRLGHTPPAEAEKAYY 286 Score = 53.1 bits (126), Expect = 6e-05 Identities = 34/72 (47%), Positives = 42/72 (58%) Frame = +1 Query: 1052347 FMRDAPEQALCERQSAQRDELIHHSDKGVPMRADPLYGSPVRSWPWPSVGSTGDSCDNAL 1052526 F+ DA EQAL R+ + IHHSDKG + + S GSTGDS DNA+ Sbjct: 173 FVLDALEQALWARRPSGT---IHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAM 229 Query: 1052527 AETINGLYKAGI 1052562 AE+INGLYKA + Sbjct: 230 AESINGLYKAEV 241 Score = 50.4 bits (119), Expect = 4e-04 Identities = 22/43 (51%), Positives = 31/43 (72%) Frame = -1 Query: 534087 VHRHFSVAAPNVLWVADATYILTGEGFLYLAVVLDVFSRCIVG 533959 V+R F P+ LWVAD TY+ T +GF+Y+A ++DVF+ IVG Sbjct: 120 VNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVG 162 >ref|NP_050655.1|Gin Length = 193 Score = 120 bits (302), Expect = 2e-25 Identities = 74/156 (47%), Positives = 91/156 (58%) Frame = +2 Query: 1270577 MKIGYARVSTHEQSLALQLDALRAAGCNKFFTDHGVSGTVFCRRGLDAALDAAKEGDTLV 1270756 M IGY RVST++Q+ LQ +AL AGC + F D +SGT R GL AL ++GDTLV Sbjct: 1 MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDK-LSGTRTDRPGLKRALKRLQKGDTLV 59 Query: 1270757 VWRLDRLGRSLSKLVDLITHLERRGIEFVSLNESINTSSSGGVLIFHMMAALAEFERNLI 1270936 VW+LDRLGRS+ L+ L+ L RGI F SL +SI+TSS G FH+M ALAE ER LI Sbjct: 60 VWKLDRLGRSMKHLISLVGELRERGINFRSLTDSIDTSSPMGRFFFHVMGALAEMERELI 119 Query: 1270937 SEXXXXXXXXXXXXXSKLGRRRALSATQRSQALELL 1271044 E GR L+ + QA LL Sbjct: 120 IERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLL 155 Score = 83.2 bits (204), Expect = 5e-14 Identities = 48/109 (44%), Positives = 63/109 (57%) Frame = +3 Query: 1265535 LRPGDTLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIF 1265714 L+ GDTLVVWKLDRLGR ++HLI+ V +L RGI + LT +IDT++ G+ F + Sbjct: 52 LQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTD---SIDTSSPMGRFFFHVM 108 Query: 1265715 AALAEFERELIAERTVXXXXXXXXXXXXXXXPFKMTAAKLRLAMAAMGQ 1265861 ALAE ERELI ERT+ P K+T A+ A + Q Sbjct: 109 GALAEMERELIIERTMAGLAAARNKGRIGGRPPKLTKAEWEQAGRLLAQ 157 Score = 57.4 bits (137), Expect = 3e-06 Identities = 33/57 (57%), Positives = 40/57 (70%) Frame = +2 Query: 1234463 MLIGYMRVSKADGSQATDLQRDALVAAGVDPAHLYEDQASGKREDRPGLASCLKALR 1234633 MLIGY+RVS D Q TDLQR+ALV AG + ++ED+ SG R DRPGL LK L+ Sbjct: 1 MLIGYVRVSTND--QNTDLQRNALVCAGCE--QIFEDKLSGTRTDRPGLKRALKRLQ 53 Score = 45.8 bits (107), Expect = 0.009 Identities = 26/50 (52%), Positives = 31/50 (62%) Frame = +2 Query: 783698 MKIGYARVSTEEQNLHLQIDALKKAGCDLLFSDHGMSGATFSCPGLDDAL 783847 M IGY RVST +QN LQ +AL AGC+ +F D +SG PGL AL Sbjct: 1 MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDK-LSGTRTDRPGLKRAL 49 >ref|YP_006499.1|Cin Length = 186 Score = 116 bits (290), Expect = 5e-24 Identities = 67/122 (54%), Positives = 78/122 (63%) Frame = +2 Query: 1270577 MKIGYARVSTHEQSLALQLDALRAAGCNKFFTDHGVSGTVFCRRGLDAALDAAKEGDTLV 1270756 M IGY RVST+EQ+ ALQ +AL +AGC F D SG R GL L GDTLV Sbjct: 1 MLIGYVRVSTNEQNTALQRNALESAGCELIFEDKA-SGKKAERPGLKKVLRMLSRGDTLV 59 Query: 1270757 VWRLDRLGRSLSKLVDLITHLERRGIEFVSLNESINTSSSGGVLIFHMMAALAEFERNLI 1270936 VW+LDRLGRS+ LV L+ L RGI F SL +SI+TS+ G FH+M ALAE ER LI Sbjct: 60 VWKLDRLGRSMRHLVVLVEELRDRGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELI 119 Query: 1270937 SE 1270942 E Sbjct: 120 VE 121 Score = 81.6 bits (200), Expect = 1e-13 Identities = 43/75 (57%), Positives = 51/75 (68%) Frame = +3 Query: 1265535 LRPGDTLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIF 1265714 L GDTLVVWKLDRLGR +RHL+ V +L RGI + LT +IDT+T G+ F + Sbjct: 52 LSRGDTLVVWKLDRLGRSMRHLVVLVEELRDRGINFRSLTD---SIDTSTPMGRFFFHVM 108 Query: 1265715 AALAEFERELIAERT 1265759 ALAE ERELI ERT Sbjct: 109 GALAEMERELIVERT 123 Score = 49.7 bits (117), Expect = 6e-04 Identities = 29/56 (51%), Positives = 40/56 (71%) Frame = +2 Query: 1234463 MLIGYMRVSKADGSQATDLQRDALVAAGVDPAHLYEDQASGKREDRPGLASCLKAL 1234630 MLIGY+RVS + Q T LQR+AL +AG + ++ED+ASGK+ +RPGL L+ L Sbjct: 1 MLIGYVRVSTNE--QNTALQRNALESAGCEL--IFEDKASGKKAERPGLKKVLRML 52 Score = 48.9 bits (115), Expect = 0.001 Identities = 27/50 (54%), Positives = 31/50 (62%) Frame = +2 Query: 783698 MKIGYARVSTEEQNLHLQIDALKKAGCDLLFSDHGMSGATFSCPGLDDAL 783847 M IGY RVST EQN LQ +AL+ AGC+L+F D SG PGL L Sbjct: 1 MLIGYVRVSTNEQNTALQRNALESAGCELIFEDKA-SGKKAERPGLKKVL 49 >ref|YP_164334.1|integrase Length = 411 Score = 115 bits (288), Expect = 9e-24 Identities = 108/392 (27%), Positives = 162/392 (41%), Gaps = 19/392 (4%) Frame = +1 Query: 433627 DGGGLYLQVSPAGARSWVYRFXXXXXXXXXXXXXXXXVSLADARERAQQCRRQLGCGLDP 433806 D GL L VS G +SW +RF +SL DAR+R + R + G+DP Sbjct: 22 DIDGLSLFVSHKGTKSWHFRFSLNGQQKRVSLGTYPELSLRDARQRRDEARSLVAQGIDP 81 Query: 433807 IEERRKEQAQRAAQLARTKTFDECTTAYIRANRAGWKNEKHVA---QWESTLDTYASPVI 433977 + R ++ + + +TF ++ + W ++ Q LD P + Sbjct: 82 RGQHRADRKTVSVE----ETFRHVAEQWLELKQGRWADDSRKGSANQARRVLDNDLYPAL 137 Query: 433978 GKLPVRDIDTTHIVRVLQPVWEAKP-ETASRVRGRIESVLDWATAHKYREGENPARWKGH 434154 + R+I + V+ + A + R + + A RE +NPA Sbjct: 138 ANMKFREIHRRDLAAVVGAIERRGALHVAEKARSWLRQIFRVGIAAGLRE-DNPASDLDI 196 Query: 434155 LDKILPARTKVRKVQHHXXXXXXXXXXXXXXXXXXEGLAARALELVILTAARTNEVIGAT 434334 L K P T+ + H E + A+ L++LTA RT E+ A Sbjct: 197 LAKEQPP-TEHNPILAHDGEELPALLVRLRSYQGSE-ITRIAVRLMLLTAVRTIELRKAA 254 Query: 434335 RSEFDLDAGMWTVPAQRMKAQRA-----------HRIPLSETALDLVRRLLDGVQDELLF 434481 ++FDL+ G+WTVP R+K R + +PLS A++ VR LL + F Sbjct: 255 PADFDLEKGIWTVPPGRVKQLRGKVRKDGEEVPPYIVPLSRQAIEEVRGLLQKT-GKYPF 313 Query: 434482 PGAKKGKPLSNMAMLTVLRRMKRTD----LTVHGFRSTFRDWAAECTTYPNEMAEMALAH 434649 A + P M+ T+ + +KR LT HG R TF A Y + E L+H Sbjct: 314 AFAGRNDPTKMMSENTINQAIKRLGFDGLLTGHGLRGTF-STALHEMGYDTTLIEGQLSH 372 Query: 434650 AVDDKVEAAYRRGDMFQRRRQMMDDWAAYCAR 434745 A +K AAY +RRR MM DWA Y R Sbjct: 373 ADPNKTRAAYNHAAHVERRRAMMQDWADYLDR 404 Score = 103 bits (256), Expect = 5e-20 Identities = 107/390 (27%), Positives = 160/390 (41%), Gaps = 22/390 (5%) Frame = +2 Query: 435380 DGGGLYLQVSTARTRSWVYXXXXXXXXXXXXXXXXHAMSLADARETAAQYRKMLLEGIDP 435559 D GL L VS T+SW + +SL DAR+ + R ++ +GIDP Sbjct: 22 DIDGLSLFVSHKGTKSWHFRFSLNGQQKRVSLGTYPELSLRDARQRRDEARSLVAQGIDP 81 Query: 435560 IESRRAERMLQHAAAAHSRTFDECSRAFIRANRAGWKSEKH---AMQWENTLGTYASPVI 435730 RA+R + TF + ++ + W + A Q L P + Sbjct: 82 RGQHRADRK----TVSVEETFRHVAEQWLELKQGRWADDSRKGSANQARRVLDNDLYPAL 137 Query: 435731 GPLPARDI---DTALVVRVLEPIWQVKPETASRVRGRIESVLDWATVHRYREGENPARWK 435901 + R+I D A VV +E + A + R + + RE +NPA Sbjct: 138 ANMKFREIHRRDLAAVVGAIERRGAL--HVAEKARSWLRQIFRVGIAAGLRE-DNPASDL 194 Query: 435902 GHLDKIFPXXXXXXXXXXXXXLPYAQVAAFMNALRAQEG--LAARALELLVLTAARTSEV 436075 L K P ++ A + LR+ +G + A+ L++LTA RT E+ Sbjct: 195 DILAKEQPPTEHNPILAHDGE----ELPALLVRLRSYQGSEITRIAVRLMLLTAVRTIEL 250 Query: 436076 IGAVRGEFDLDAATWTVSAERMKAGR-----------PHRIPLSGPALALVRGLLD-GAE 436219 A +FDL+ WTV R+K R P+ +PLS A+ VRGLL + Sbjct: 251 RKAAPADFDLEKGIWTVPPGRVKQLRGKVRKDGEEVPPYIVPLSRQAIEEVRGLLQKTGK 310 Query: 436220 GDLVFPGTR-KGRLLSNMAMLTVLRRMKIAG-LTVHGFRSTFRDWAAECTRYPNEMAEMA 436393 F G +++S + ++R+ G LT HG R TF A Y + E Sbjct: 311 YPFAFAGRNDPTKMMSENTINQAIKRLGFDGLLTGHGLRGTF-STALHEMGYDTTLIEGQ 369 Query: 436394 LAHAVDDKVEAAYRRGDMFQRRKQMMDDWA 436483 L+HA +K AAY +RR+ MM DWA Sbjct: 370 LSHADPNKTRAAYNHAAHVERRRAMMQDWA 399 >ref|NP_945089.1|gp58 Length = 297 Score = 110 bits (276), Expect = 2e-22 Identities = 92/295 (31%), Positives = 137/295 (46%), Gaps = 10/295 (3%) Frame = -1 Query: 13263 LPPLNALRAFEAAGRLGSFKEAAAELHVTHGAVSQHVRLLEEWLGASLFDRYNRRVTLTP 13084 LPPL L F+AA R G+F AA EL+V GAVS+ V LE +LG +LF R + + LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 13083 AAKVYLEEIGPLFERLSQATARYGVAETVSRTLSVNAPATFTLRWLVPRLAKFRAAHPDV 12904 A + Y + + + +ATA +T A T TL +L R+A+F A HP+V Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATL-FLADRIAEFSAEHPEV 124 Query: 12903 DVNVETSNRPLESLKEDYDI---VIRGGPDTFYGYSMRPFLSEERLPVCSPALL--QRVP 12739 V + ++DI IR P G + ++E+ C+P L +RVP Sbjct: 125 SVRILVREGVFNLNAAEFDIGVYYIRDVPPP--GIAGTAIVAEDVHAYCAPTFLAGRRVP 182 Query: 12738 LRSPGDLQQHTLLHTSSLPRLWPDW-----LASAQIPALRPAATLTFDHFYLTLQAAIDG 12574 P DL + TLL R W W L +I RPA T++ + + + LQ A+ G Sbjct: 183 ---PQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEI-GFRPARTISANSYPVLLQLALHG 238 Query: 12573 IGIAMGPTALVSADLAAGRLAAPFAGPRLPSRSYCTYVPDAKFGDERVMLFRSWL 12409 G +G +++ + +G+L +Y P + V +FR WL Sbjct: 239 HGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 105 bits (261), Expect = 1e-20 Identities = 84/292 (28%), Positives = 123/292 (42%), Gaps = 5/292 (1%) Frame = -1 Query: 901992 LDPLPSLNALRAFEAASRHLNFRLAAGELGVTQGAVAQHVRGLESSIGLVLFERRPRALV 901813 + PLP L L F+AA+RH NF AA EL V QGAV++ V LE+ +G LF R +AL Sbjct: 3 IQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALH 62 Query: 901812 LTENGRSYAASVRRAFDLLVEATQALRPQ--PLQLTISVTPTFAAKWLIPRLQDFTAAHP 901639 LT G+ YA V VEAT + + P LTI+ A +L R+ +F+A HP Sbjct: 63 LTRAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHP 122 Query: 901638 EIDLRIIATDRLSHFQTDAIDLAVRYGQPPFGVGLNAECLFESVLVAVGSPRLANELRSS 901459 E+ +RI+ + + + D+ V Y + G+ + + A +P R Sbjct: 123 EVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP 182 Query: 901458 GAARFFARYPLLHDAHNQWPPFLQEVLKQSAAIG---EKNIRFNQTSLAIDAAMAGQGIA 901288 A + + QW + IG + I N + + A+ G G Sbjct: 183 PQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAI 242 Query: 901287 LAPFAFVGRAIAMGGLSRIFDVELRTGSGFYVVTPRRLRHPGPVAAVRGWLL 901132 L + + G L D G + V+ P R V R WLL Sbjct: 243 LGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 58.5 bits (140), Expect = 1e-06 Identities = 33/120 (27%), Positives = 58/120 (48%) Frame = +3 Query: 994812 LNLLQVFISVAENSSFTLAGSEMHRTQSAISMKIKRLEEILGVPVFERSGKSIELTKEGA 994991 L L F + A + +FT A E++ Q A+S ++ +LE LG +F R K++ LT+ G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 994992 IFLTHSRRILQLVDEAMSAVGAVRKSNVVRLGCVEDYAVRTIPKILVDFWVEHPDVHIEM 995171 + IL EA + V + + + + C A + + +F EHP+V + + Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRI 128 Score = 57.8 bits (138), Expect = 2e-06 Identities = 47/150 (31%), Positives = 72/150 (48%) Frame = -3 Query: 634744 LRQLRYFIAAARAGQFSMAATNEHVSQSAITNAVIALEQALGTKLFDRGAHGVTMTVDGH 634565 L+ L +F AAAR G F+ AA +V+Q A++ V+ LE LGT LF R A + +T G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 634564 DFYHHARHVLDSVRDAMHKPRAGARATSGTVRIAASYAVLGYFLPELLARFRASFPAIEL 634385 + +L +A S T+ A+ A L FL + +A F A P E+ Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATL--FLADRIAEFSAEHP--EV 124 Query: 634384 DLRDMDRAVIENAVLDGTIDLGVTLVSNTP 634295 +R + R + N + D+GV + + P Sbjct: 125 SVRILVREGVFN-LNAAEFDIGVYYIRDVP 153 Score = 57.8 bits (138), Expect = 2e-06 Identities = 43/142 (30%), Positives = 65/142 (45%) Frame = +2 Query: 1081151 LRQLRYFAILARELHFGRAADVACVTQPALSQQIAKLEVLVGTPLFARDSRGVMLTAAGD 1081330 L+ L +F AR +F RAA+ V Q A+S+Q+ KLE +GT LF RD++ + LT AG Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1081331 ALRDGLDNVFGQLDRALRAAREAGEDQTFTLSIGLVEYTNLPFVPPALIRLQALYPDVMI 1081510 D + + A A E +L+I T F+ + A +P+V + Sbjct: 69 QYADRVHAILADCVEA--TALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1081511 IRREMNARRQWAALGTGEIDVG 1081576 + R L E D+G Sbjct: 127 ---RILVREGVFNLNAAEFDIG 145 Score = 54.7 bits (130), Expect = 2e-05 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 1/122 (0%) Frame = +3 Query: 996369 LNVLRYFLEVSRHGSVRKAAEHIHITPSAVSRHIAILEGMIGAPLFERRSRGMVLTPEGE 996548 L L +F +RHG+ +AAE +++ AVS+ + LE +G LF R ++ + LT G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 996549 ILFKYADRIIGNL-DIVKCAVGEIRGMKKGILRIFAIEAVASSILYPAIRDFIVKHSGVT 996725 +YADR+ L D V+ ++ L I A+ L I +F +H V+ Sbjct: 69 ---QYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 996726 IQ 996731 ++ Sbjct: 126 VR 127 Score = 53.5 bits (127), Expect = 4e-05 Identities = 43/144 (29%), Positives = 74/144 (51%) Frame = +2 Query: 501953 LRRLRYFVALADELHFGRAAQRLHVAQPPLTRQIGLLEAELEFPLFQRTSRTVQLTTAGA 502132 L+ L +F A A +F RAA+ L+VAQ +++Q+ LE L LF R ++ + LT AG Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 502133 RFLPFARAIVDDCVRAEDYARKLAQGTAGSVTIGYSASVSLDAGFGAALRSAALQFPDIG 502312 ++ AI+ DCV A A + + T S+TI AS + + + + P++ Sbjct: 69 QYADRVHAILADCVEAT--ALVMKEQTPHSLTIA-CASGTATLFLADRIAEFSAEHPEVS 125 Query: 502313 WSLVEMPSGILNESVRGGQVDIGI 502384 ++ + G+ N + + DIG+ Sbjct: 126 VRIL-VREGVFN--LNAAEFDIGV 146 Score = 53.5 bits (127), Expect = 4e-05 Identities = 65/254 (25%), Positives = 101/254 (39%), Gaps = 9/254 (3%) Frame = -1 Query: 907629 FLLVAETGGFSSAARQLRVVPSVVTKRVTQLEAEIGRPLFVRTTRRVELTPTGK--AALA 907456 F A G F+ AA +L V V+K+V +LE +G LFVR + + LT G+ A Sbjct: 15 FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRV 74 Query: 907455 HARDMVLAYDRMTGDMTGDVSELSGRLKVKAPSALTYLHLAKVINRFLIRHPKVTLELLL 907276 HA +LA D + + L + S L LA I F HP+V++ +L+ Sbjct: 75 HA---ILA-DCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILV 130 Query: 907275 IDRPVNPATEGFDL---VITGLPPSYDQIDEIPLFPIQRMLFASPEYLAEMGTPLQPEDL 907105 + N FD+ I +PP I + + +P +LA G + P+DL Sbjct: 131 REGVFNLNAAEFDIGVYYIRDVPP--PGIAGTAIVAEDVHAYCAPTFLA--GRRVPPQDL 186 Query: 907104 AHHRCL----QYSYLSAGMTWTLNGRHGQVDVHVNSTFQTNDIQVMHQAVTDGLGIGILP 906937 L Q W G++ T N V+ Q G G + Sbjct: 187 MEATLLVAEEQQRQWMGWRDW-FRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILGW 245 Query: 906936 GYAAQKALENGRLI 906895 + +E+G+L+ Sbjct: 246 KHMITPLVESGKLV 259 Score = 50.1 bits (118), Expect = 5e-04 Identities = 38/123 (30%), Positives = 56/123 (45%) Frame = -3 Query: 1003927 LNNVITFLAVAETLSFRRAAEHTHTSQSAVSARVSQLEDRLGVRLFHRTTRQVTLTAEGL 1003748 L ++ F A A +F RAAE + +Q AVS +V +LE LG LF R + + LT G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1003747 QLFVVARTAVEDMERVAESLRKKAALQSGELTIAAVPSIGQTVLPTIMGEFHRRYPGVTL 1003568 Q + D + K+ S LTIA L + EF +P V++ Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1003567 KLL 1003559 ++L Sbjct: 127 RIL 129 Score = 49.7 bits (117), Expect = 6e-04 Identities = 37/138 (26%), Positives = 62/138 (44%) Frame = -2 Query: 1403195 FLAVARIGTLSGAARSLKVDHATVSRRLSALEDEIKTRLIERLPRACKLTLIGQRVFELA 1403016 F A AR G + AA L V VS+++ LE + T L R +A LT GQ+ + Sbjct: 15 FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRV 74 Query: 1403015 QGMEEDAYAIERFVDASRSPLSGKVSLSAPPVLVAHFLAKHLADFRRVHPGVQLSVSGEA 1402836 + D V ++P S ++ ++ + FLA +A+F HP V + + Sbjct: 75 HAILADCVEATALVMKEQTPHSLTIACASGTATL--FLADRIAEFSAEHPEVSVRILVRE 132 Query: 1402835 RQISLSRREADVALRLVR 1402782 +L+ E D+ + +R Sbjct: 133 GVFNLNAAEFDIGVYYIR 150 Score = 49.3 bits (116), Expect = 8e-04 Identities = 25/66 (37%), Positives = 40/66 (60%) Frame = +1 Query: 1391884 FLAVAQMGSFTRAADILHLTQSSVTALIAQLENSLGVRLFSRNSRHVELTAAGTDLLPRA 1392063 F A A+ G+FTRAA+ L++ Q +V+ + +LE LG LF R+++ + LT AG R Sbjct: 15 FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRV 74 Query: 1392064 RRLVGD 1392081 ++ D Sbjct: 75 HAILAD 80 Score = 48.1 bits (113), Expect = 0.002 Identities = 31/89 (34%), Positives = 49/89 (55%) Frame = +1 Query: 687646 LKYFVAIVECGSMGKAAEKLYVAQPSLSQQMGRLESEFGTSLLLRSQRGVTPTAAGQALY 687825 L +F A G+ +AAE+L VAQ ++S+Q+ +LE+ GT+L +R + + T AGQ Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 687826 ARSRAILRQMEQLKQHVKEGASAESGTVA 687912 R AIL + V + + S T+A Sbjct: 72 DRVHAILADCVEATALVMKEQTPHSLTIA 100 Score = 47.0 bits (110), Expect = 0.004 Identities = 61/282 (21%), Positives = 114/282 (40%), Gaps = 3/282 (1%) Frame = -3 Query: 1013275 FVQVAETRSFAAAGRLLGISASAVGKRVSALEEQLGVRLFHRSTRSVALTAEGGLFLERS 1013096 F A +F A L ++ AV K+V LE LG LF R +++ LT G + +R Sbjct: 15 FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRV 74 Query: 1013095 RRILGEIEAAQAELSQVNLSPRGRLKVSLPLVAEPFLSV-MAQFKQAYPDVDLDLEFTDR 1012919 IL + A A L +P A FL+ +A+F +P+V + + + Sbjct: 75 HAILADCVEATA-LVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVREG 133 Query: 1012918 RVDVIDEGFD-AVIRSGDAPDSRLTARRLGSFSMLLVGSPDYLA-RCGTPETASDLSQHA 1012745 ++ FD V D P + + + + +P +LA R P+ + + Sbjct: 134 VFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVPPQDLMEATLLV 193 Query: 1012744 CIQFRYPNTGKLQVWPLDQDEITADLQLSAAIICNNLETRIFFALQGLGIAYLPDFAIRQ 1012565 + + G + L EI + + I N+ + AL G G I Sbjct: 194 AEEQQRQWMGWRDWFRLTVGEI--GFRPARTISANSYPVLLQLALHGHGAILGWKHMITP 251 Query: 1012564 HLAAGRLIHVMPSCSEADTMFRIMWPSGKHFAPRLRVFIDFL 1012439 + +G+L+ + + ++++WP+ + P + +F ++L Sbjct: 252 LVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 45.4 bits (106), Expect = 0.012 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 1/131 (0%) Frame = +3 Query: 8280 LKFLETFIWVAKLRSFSLAADKLHSTQAAISSRISVLEQELGAKLFTREPKGVALTRAGE 8459 L+ L F A+ +F+ AA++L+ Q A+S ++ LE LG LF R+ K + LTRAG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 8460 RVLQHAEQVNESMTRLYASLQDEKFAFGTIRIGAMDSAIHSWFVNFVSDVMHYYPNLDIE 8639 + + A + E+ ++ I + + +++ +P + + Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPH-SLTIACASGTATLFLADRIAEFSAEHPEVSVR 127 Query: 8640 V-TSETALNLN 8669 + E NLN Sbjct: 128 ILVREGVFNLN 138 Score = 42.0 bits (97), Expect = 0.13 Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 3/185 (1%) Frame = +1 Query: 742756 LELLNTLSVVADAGSLSAAAVQLHRSQSAVSEQIRKLEESCGLALFLRGKKGASLTPAGX 742935 L+ L A G+ + AA +L+ +Q AVS+Q+ KLE G LF+R K LT AG Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 742936 XXXXXXXXXXXXNDVAYRDMQGLSLAGDLRLAITDYFRPTDIAKVLKQLGDQYPSLRLHV 743115 A + L +A +A + + ++P + + + Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRI 128 Query: 743116 SVYKSALIRRDAGSGNFDIGVSMRVADPAGNESPVEKNGLASIMIRREPLQWVAAPSF-- 743289 V + + + FDIGV + D V G+A I E + AP+F Sbjct: 129 LVREGVF---NLNAAEFDIGV-YYIRD-------VPPPGIAGTAIVAEDVHAYCAPTFLA 177 Query: 743290 -ERVP 743301 RVP Sbjct: 178 GRRVP 182 Score = 40.4 bits (93), Expect = 0.38 Identities = 25/80 (31%), Positives = 40/80 (50%) Frame = -1 Query: 693369 AAAGSLSKAATVLGIAQPALGRQIRKLEEECGLRLVYRHGRGVSLTPEGQALIERAGPLV 693190 A G+ ++AA L +AQ A+ +Q+ KLE G L R + + LT GQ +R ++ Sbjct: 19 ARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAIL 78 Query: 693189 KQLAAIPADLQLERQSPEGL 693130 A L ++ Q+P L Sbjct: 79 ADCVEATA-LVMKEQTPHSL 97 >ref|NP_958192.1|gene 16 protein Length = 385 Score = 104 bits (259), Expect = 2e-20 Identities = 105/387 (27%), Positives = 166/387 (42%), Gaps = 12/387 (3%) Frame = +2 Query: 435359 KKPGRYCDGGGLYLQVSTARTRSWVYXXXXXXXXXXXXXXXXHAMSLADARETAAQYRKM 435538 +KP R DG GLYL V + + W M+L +AR+ A RK Sbjct: 14 EKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKD 73 Query: 435539 LLEGIDPIESRRAERMLQHAAAAHSRTFDECSRAFIRANRAGWKSEKHAMQWENTLGTYA 435718 + GIDP+++++A +A + +D + + G+ +E M ++ L Sbjct: 74 ISVGIDPVKAKKASSNNNSFSAIYKEWYDHKKQVW----SVGYATELAKMFDDDIL---- 125 Query: 435719 SPVIGPLPARDIDTALVVRVLEPIW-QVKPETASRVRGRIESVLDWATVHRYREGENPA- 435892 P+IG L +DI+ ++ V+ + E A++ R R V +A V R NPA Sbjct: 126 -PIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG-RAKYNPAP 183 Query: 435893 ----RWKGHLDKIFPXXXXXXXXXXXXXLPYAQVAAFMNALRAQEG--LAARALELLVLT 436054 KG+ K FP LP Q+ AF AL G ++ A ++L T Sbjct: 184 DLADAMKGYRKKNFPF------------LPADQIPAFNKALATFSGSIVSLIATKVLRYT 231 Query: 436055 AARTSEVIGAVRGEFDLDAATWTVSAERMKAGRPHRIPLSGPALALVRGL--LDGAEGDL 436228 A RT E+ D + T+ A MK + H +P+S + L+ L + + Sbjct: 232 ALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVIELLTTLSSITKPVSEF 291 Query: 436229 VFPGTR-KGRLLSNMAMLTVLRRMKIAGL-TVHGFRSTFRDWAAECTRYPNEMAEMALAH 436402 VF G K + + A+L V++++ GL + HGFR F E +P + E+ LAH Sbjct: 292 VFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNE-HEWPADAIEVQLAH 350 Query: 436403 AVDDKVEAAYRRGDMFQRRKQMMDDWA 436483 A V Y +R++MM WA Sbjct: 351 ANGGSVRGIYNHAQYLDKRREMMQWWA 377 Score = 94.0 bits (232), Expect = 3e-17 Identities = 89/384 (23%), Positives = 156/384 (40%), Gaps = 10/384 (2%) Frame = +1 Query: 433609 RPGYYCDGGGLYLQVSPAGARSWVYRFXXXXXXXXXXXXXXXXVSLADARERAQQCRRQL 433788 +P DG GLYL V +G + W R+ ++L +AR++A R+ + Sbjct: 15 KPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDI 74 Query: 433789 GCGLDPIEERRKEQAQRAAQLARTKTFDECTTAYIRANRAGWKNEKHVAQWESTLDTYAS 433968 G+DP++ ++ + + +D + W + + + D Sbjct: 75 SVGIDPVKAKKASSNNNSFSAIYKEWYDH--------KKQVW-SVGYATELAKMFDDDIL 125 Query: 433969 PVIGKLPVRDIDTTHIVRVLQPVWE-AKPETASRVRGRIESVLDWATAHKYREGENPA-- 434139 P+IG L ++DI+ ++ V++ + E A++ R R V +A R NPA Sbjct: 126 PIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG-RAKYNPAPD 184 Query: 434140 ---RWKGHLDKILPARTKVRKVQHHXXXXXXXXXXXXXXXXXXEGLAARALELVILTAAR 434310 KG+ K P ++ A +++ TA R Sbjct: 185 LADAMKGYRKKNFP----------FLPADQIPAFNKALATFSGSIVSLIATKVLRYTALR 234 Query: 434311 TNEVIGATRSEFDLDAGMWTVPAQRMKAQRAHRIPLSETALDLVRRLLDGVQ--DELLFP 434484 T E+ D + + T+ A MK ++ H +P+S+ ++L+ L + E +F Sbjct: 235 TKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVIELLTTLSSITKPVSEFVFA 294 Query: 434485 GAK-KGKPLSNMAMLTVLRRMKRTDL-TVHGFRSTFRDWAAECTTYPNEMAEMALAHAVD 434658 G K KP+ A+L V++++ L + HGFR F E +P + E+ LAHA Sbjct: 295 GRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNE-HEWPADAIEVQLAHANG 353 Query: 434659 DKVEAAYRRGDMFQRRRQMMDDWA 434730 V Y +RR+MM WA Sbjct: 354 GSVRGIYNHAQYLDKRREMMQWWA 377 Score = 68.9 bits (167), Expect = 1e-09 Identities = 89/367 (24%), Positives = 158/367 (43%), Gaps = 15/367 (4%) Frame = +2 Query: 1240832 LTKSAIDAAQPQAQPVELRDTLVPGFMCKVTPAGRKVFMLQYRTNAGERRKPAIGLYGEL 1241011 LT I+AA+P+ +P L D G V +G+KV+ L+Y+ + G+ + +G Y + Sbjct: 2 LTVKQIEAAKPKEKPYRLLDG--NGLYLYVPVSGKKVWQLRYKID-GKEKILTVGKYPLM 58 Query: 1241012 TVEQARSLAQTWLAEVRRGGDPGGDKAEARKAPTVKELCGRFMSDYSKVRNKPSTQKGYQ 1241191 T+++AR A T ++ G DP +A+KA + ++ K GY Sbjct: 59 TLQEARDKAWTARKDISVGIDP----VKAKKASSNNNSFSAIYKEWYD-HKKQVWSVGYA 113 Query: 1241192 GNI----DRNIIPILGRMKVQDVKRPDVATMMKKLEST-PME-ANHTLAVMRKMFNMAEI 1241353 + D +I+PI+G +++QD++ + ++++ E ME AN ++F A + Sbjct: 114 TELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIV 173 Query: 1241354 WGLRTDGTNPCRHIPQYPQG---KTTRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRL 1241524 G NP + +G K + +++ +K A S + +A ++ Sbjct: 174 TGRAK--YNPAPDLADAMKGYRKKNFPFLPADQIPA----FNKALATFSGSIVSLIATKV 227 Query: 1241525 QFEFAARRSEILLLEWTWVDLENRRVAWPDSKTGGMS---KPMSEEAHRLLSTVP--RHE 1241689 A R E+ ++W VD ENR + S G PMS++ LL+T+ Sbjct: 228 LRYTALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVIELLTTLSSITKP 287 Query: 1241690 GSLYVLPSLRDPLKHMTNGEHYNGWSRILKAAGVQHVGT-HGIRHRSATDIANSGIPVKV 1241866 S +V D K + N ++K G + + + HG RH +T + P Sbjct: 288 VSEFVFAGRNDKKKPICE----NAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADA 343 Query: 1241867 GMVLTAH 1241887 V AH Sbjct: 344 IEVQLAH 350 >ref|NP_112034.1|integrase Length = 385 Score = 100 bits (248), Expect = 4e-19 Identities = 103/387 (26%), Positives = 165/387 (42%), Gaps = 12/387 (3%) Frame = +2 Query: 435359 KKPGRYCDGGGLYLQVSTARTRSWVYXXXXXXXXXXXXXXXXHAMSLADARETAAQYRKM 435538 +KP R D GLYL V + + W M+L +AR+ A RK Sbjct: 14 EKPYRLLDSNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWAARKD 73 Query: 435539 LLEGIDPIESRRAERMLQHAAAAHSRTFDECSRAFIRANRAGWKSEKHAMQWENTLGTYA 435718 + GIDP+++++A +A + ++ + + G+ +E M ++ L Sbjct: 74 ISVGIDPVKAKKAPSNNNSFSAIYKEWYEHKKQVW----SVGYATELAKMFDDDIL---- 125 Query: 435719 SPVIGPLPARDIDTALVVRVLEPIW-QVKPETASRVRGRIESVLDWATVHRYREGENPA- 435892 P+IG L +DI+ ++ V+ + E A++ R R V +A V R NPA Sbjct: 126 -PIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG-RAKYNPAP 183 Query: 435893 ----RWKGHLDKIFPXXXXXXXXXXXXXLPYAQVAAFMNALRAQEG--LAARALELLVLT 436054 KG+ K FP LP Q+ AF AL G ++ A ++L T Sbjct: 184 DLADAMKGYRKKNFPF------------LPADQIPAFNKALATFSGSIVSLIATKILRYT 231 Query: 436055 AARTSEVIGAVRGEFDLDAATWTVSAERMKAGRPHRIPLSGPALALVRGL--LDGAEGDL 436228 A RT E+ D + T+ A MK + H +P+S + L+ L + + Sbjct: 232 ALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEF 291 Query: 436229 VFPGTR-KGRLLSNMAMLTVLRRMKIAGL-TVHGFRSTFRDWAAECTRYPNEMAEMALAH 436402 VF G K + + A+L V++++ GL + HGFR F E +P + E+ LAH Sbjct: 292 VFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNE-HEWPADAIEVQLAH 350 Query: 436403 AVDDKVEAAYRRGDMFQRRKQMMDDWA 436483 A V Y +R++MM WA Sbjct: 351 ANGGSVRGIYNHAQYLDKRREMMQWWA 377 Score = 91.7 bits (226), Expect = 1e-16 Identities = 88/384 (22%), Positives = 155/384 (40%), Gaps = 10/384 (2%) Frame = +1 Query: 433609 RPGYYCDGGGLYLQVSPAGARSWVYRFXXXXXXXXXXXXXXXXVSLADARERAQQCRRQL 433788 +P D GLYL V +G + W R+ ++L +AR++A R+ + Sbjct: 15 KPYRLLDSNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWAARKDI 74 Query: 433789 GCGLDPIEERRKEQAQRAAQLARTKTFDECTTAYIRANRAGWKNEKHVAQWESTLDTYAS 433968 G+DP++ ++ + +F + + W + + + D Sbjct: 75 SVGIDPVKAKKAP--------SNNNSFSAIYKEWYEHKKQVW-SVGYATELAKMFDDDIL 125 Query: 433969 PVIGKLPVRDIDTTHIVRVLQPVWE-AKPETASRVRGRIESVLDWATAHKYREGENPA-- 434139 P+IG L ++DI+ ++ V++ + E A++ R R V +A R NPA Sbjct: 126 PIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG-RAKYNPAPD 184 Query: 434140 ---RWKGHLDKILPARTKVRKVQHHXXXXXXXXXXXXXXXXXXEGLAARALELVILTAAR 434310 KG+ K P ++ A +++ TA R Sbjct: 185 LADAMKGYRKKNFP----------FLPADQIPAFNKALATFSGSIVSLIATKILRYTALR 234 Query: 434311 TNEVIGATRSEFDLDAGMWTVPAQRMKAQRAHRIPLSETALDLVRRLLDGVQ--DELLFP 434484 T E+ D + + T+ A MK ++ H +P+S+ ++L+ L + E +F Sbjct: 235 TKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFA 294 Query: 434485 GAK-KGKPLSNMAMLTVLRRMKRTDL-TVHGFRSTFRDWAAECTTYPNEMAEMALAHAVD 434658 G K KP+ A+L V++++ L + HGFR F E +P + E+ LAHA Sbjct: 295 GRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNE-HEWPADAIEVQLAHANG 353 Query: 434659 DKVEAAYRRGDMFQRRRQMMDDWA 434730 V Y +RR+MM WA Sbjct: 354 GSVRGIYNHAQYLDKRREMMQWWA 377 Score = 73.2 bits (178), Expect = 5e-11 Identities = 91/367 (24%), Positives = 161/367 (43%), Gaps = 15/367 (4%) Frame = +2 Query: 1240832 LTKSAIDAAQPQAQPVELRDTLVPGFMCKVTPAGRKVFMLQYRTNAGERRKPAIGLYGEL 1241011 LT I+AA+P+ +P L D+ G V +G+KV+ L+Y+ + G+ + +G Y + Sbjct: 2 LTVKQIEAAKPKEKPYRLLDS--NGLYLYVPVSGKKVWQLRYKID-GKEKILTVGKYPLM 58 Query: 1241012 TVEQARSLAQTWLAEVRRGGDPGGDKAEARKAPTVKELCGRFMSDYSKVRNKPSTQKGYQ 1241191 T+++AR A W A R+ G D +A+KAP+ ++ + K GY Sbjct: 59 TLQEARDKA--WAA--RKDISVGIDPVKAKKAPSNNNSFSAIYKEWYE-HKKQVWSVGYA 113 Query: 1241192 GNI----DRNIIPILGRMKVQDVKRPDVATMMKKLEST-PME-ANHTLAVMRKMFNMAEI 1241353 + D +I+PI+G +++QD++ + ++++ E ME AN ++F A + Sbjct: 114 TELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIV 173 Query: 1241354 WGLRTDGTNPCRHIPQYPQG---KTTRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRL 1241524 G NP + +G K + +++ +K A S + +A ++ Sbjct: 174 TGRAK--YNPAPDLADAMKGYRKKNFPFLPADQIPA----FNKALATFSGSIVSLIATKI 227 Query: 1241525 QFEFAARRSEILLLEWTWVDLENRRVAWPDSKTGGMS---KPMSEEAHRLLSTVP--RHE 1241689 A R E+ ++W VD ENR + S G PMS++ LL+T+ Sbjct: 228 LRYTALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKP 287 Query: 1241690 GSLYVLPSLRDPLKHMTNGEHYNGWSRILKAAGVQHVGT-HGIRHRSATDIANSGIPVKV 1241866 S +V D K + N ++K G + + + HG RH +T + P Sbjct: 288 VSEFVFAGRNDKKKPICE----NAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADA 343 Query: 1241867 GMVLTAH 1241887 V AH Sbjct: 344 IEVQLAH 350 >ref|YP_024945.1|gp25 Length = 427 Score = 82.0 bits (201), Expect = 1e-13 Identities = 108/409 (26%), Positives = 157/409 (38%), Gaps = 24/409 (5%) Frame = +1 Query: 433627 DGGGLYLQVSPAGARSWVYRFXXXXXXXXXXXXXXXX-VSLADARERAQQCRRQLGCGLD 433803 DGGGL +S +G +WV R+ +SLA AR+ A+ R + G D Sbjct: 27 DGGGLTFTLSASGTAAWVLRYRLAGGRRRELTLGNYPDLSLAAARKAARAHRVAIDNGAD 86 Query: 433804 PIEERRKEQAQRAAQLA--------RTKTFDECTTAYIRANRAGWKNEKHVAQWESTLDT 433959 P ++ E+A AA RTK F + + A+ ++ W+ LD Sbjct: 87 PAAAKKTERAASAAAWTVNDLIADFRTKRFAQDIEKPLSASTIYYRT------WD--LDN 138 Query: 433960 YASPVIGKLPVRDIDTTHIVRVLQPVWEAKPETASRVRGRIESVLDWATAHKYREGENPA 434139 A P +G L VR + I++ ++ + R+ + + D A K A Sbjct: 139 VAGPKLGSLEVRKVTPLDIIQAVEDAGRGWT-MSKRILTTVTQLFDHACGRKIIAANPCA 197 Query: 434140 RWKGHLDKILPARTKVR-KVQHHXXXXXXXXXXXXXXXXXXEGLAARALELVILTAARTN 434316 K L I+ AR KVR +V GL R L + T RTN Sbjct: 198 GVK--LTAIMGARPKVRPRVMLTVEELAKILPGIDDTIGRANGLMLRVL---LATCVRTN 252 Query: 434317 EVIGATRSEFDLDAGMWTVPAQRMKAQRAHRIPLSETALDLVRRL--LDGVQDELL-FPG 434487 E++ A + DL G W V + +K + +PL + L L G LL G Sbjct: 253 ELVKARKELIDLQRGSWFVADETVKTRNGFLVPLVPLVSSWIEELIALSGDSPWLLPARG 312 Query: 434488 AKKGKPLSNMAM------LTVLRRMKRTDL-----TVHGFRSTFRDWAAECTTYPNEMAE 434634 ++ K L N + + R R DL T H RST + P E+ E Sbjct: 313 QQRIKRLGNTHVGNTTLWAAIDRAFLRGDLEARRFTPHDTRSTAKGHMMN-MGIPKEITE 371 Query: 434635 MALAHAVDDKVEAAYRRGDMFQRRRQMMDDWAAYCARQADGE*RRRADV 434781 +AL H + +E Y RR ++ WA ADG R ADV Sbjct: 372 IALNHKLRG-MEGIYDVRQEIPERRLALEQWAEVVGACADG---READV 416 Score = 57.4 bits (137), Expect = 3e-06 Identities = 88/387 (22%), Positives = 154/387 (39%), Gaps = 27/387 (6%) Frame = +2 Query: 1240871 QPVELRDTLVPGFMCKVTPAGRKVFMLQYRTNAGERRKPAIGLYGELTVEQARSLAQTWL 1241050 QPV D G ++ +G ++L+YR G RR+ +G Y +L++ AR A+ Sbjct: 21 QPVAKSDG--GGLTFTLSASGTAAWVLRYRLAGGRRRELTLGNYPDLSLAAARKAARAHR 78 Query: 1241051 AEVRRGGDPGGDKAEARKAP----TVKELCG-----RFMSDYSKVRNKPSTQKGYQGNID 1241203 + G DP K R A TV +L RF D K + ST ++D Sbjct: 79 VAIDNGADPAAAKKTERAASAAAWTVNDLIADFRTKRFAQDIEKPLS-ASTIYYRTWDLD 137 Query: 1241204 RNIIPILGRMKVQDVKRPDVATMMKKLESTPMEANHTLAVMRKMFNMAEIWGLRTDGTNP 1241383 P LG ++V+ V D+ ++ + L + ++F+ A G + NP Sbjct: 138 NVAGPKLGSLEVRKVTPLDIIQAVEDAGRGWTMSKRILTTVTQLFDHA--CGRKIIAANP 195 Query: 1241384 CRHIP------QYPQGKTTRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRLQFEFAAR 1241545 C + P+ + ++T EE+ K+ +D ++ L +R+ R Sbjct: 196 CAGVKLTAIMGARPKVRPRVMLTVEELAKILPGIDDTIGRAN-----GLMLRVLLATCVR 250 Query: 1241546 RSEILLLEWTWVDLENRR--VAWPDSKT-GGMSKPMSEEAHRLLSTVPRHEG-SLYVLPS 1241713 +E++ +DL+ VA KT G P+ + + G S ++LP+ Sbjct: 251 TNELVKARKELIDLQRGSWFVADETVKTRNGFLVPLVPLVSSWIEELIALSGDSPWLLPA 310 Query: 1241714 L-RDPLKHMTNGEHYNG--WSRILKA-----AGVQHVGTHGIRHRSATDIANSGIPVKVG 1241869 + +K + N N W+ I +A + H R + + N GIP ++ Sbjct: 311 RGQQRIKRLGNTHVGNTTLWAAIDRAFLRGDLEARRFTPHDTRSTAKGHMMNMGIPKEIT 370 Query: 1241870 MVLTAHKTVAMFMRYIHTEDAPVRQAA 1241950 + HK M Y ++ P R+ A Sbjct: 371 EIALNHKLRGMEGIYDVRQEIPERRLA 397 Score = 56.2 bits (134), Expect = 7e-06 Identities = 88/400 (22%), Positives = 151/400 (37%), Gaps = 26/400 (6%) Frame = +2 Query: 435362 KPGRYCDGGGLYLQVSTARTRSWVYXXXXXXXXXXXXXXXXHA-MSLADARETAAQYRKM 435538 +P DGGGL +S + T +WV + +SLA AR+ A +R Sbjct: 21 QPVAKSDGGGLTFTLSASGTAAWVLRYRLAGGRRRELTLGNYPDLSLAAARKAARAHRVA 80 Query: 435539 LLEGIDPIESRRAERMLQHAAAAHSRTFDECSRAFIRANRAGWKSEK-------HAMQWE 435697 + G DP +++ ER AA+A + T ++ F R R EK + W+ Sbjct: 81 IDNGADPAAAKKTER----AASAAAWTVNDLIADF-RTKRFAQDIEKPLSASTIYYRTWD 135 Query: 435698 NTLGTYASPVIGPLPARDIDTALVVRVLEPI---WQVKPETASRVRGRIESVLDWATVHR 435868 L A P +G L R + +++ +E W + + R+ + + D A R Sbjct: 136 --LDNVAGPKLGSLEVRKVTPLDIIQAVEDAGRGWTM----SKRILTTVTQLFDHA-CGR 188 Query: 435869 YREGENPARWKGHLDKIFPXXXXXXXXXXXXXLPYAQVAAFMNALRAQEGLA-ARALELL 436045 NP K+ L ++A + + G A L +L Sbjct: 189 KIIAANPCAGV----KLTAIMGARPKVRPRVMLTVEELAKILPGIDDTIGRANGLMLRVL 244 Query: 436046 VLTAARTSEVIGAVRGEFDLDAATWTVSAERMKAGRPHRIPLSGPALALVRGLLD-GAEG 436222 + T RT+E++ A + DL +W V+ E +K +PL + + L+ + Sbjct: 245 LATCVRTNELVKARKELIDLQRGSWFVADETVKTRNGFLVPLVPLVSSWIEELIALSGDS 304 Query: 436223 DLVFPGTRKGRL-------LSNMAMLTVLRRMKIAG------LTVHGFRSTFRDWAAECT 436363 + P + R+ + N + + R + G T H RST + Sbjct: 305 PWLLPARGQQRIKRLGNTHVGNTTLWAAIDRAFLRGDLEARRFTPHDTRSTAKGHMMN-M 363 Query: 436364 RYPNEMAEMALAHAVDDKVEAAYRRGDMFQRRKQMMDDWA 436483 P E+ E+AL H + +E Y R+ ++ WA Sbjct: 364 GIPKEITEIALNHKLRG-MEGIYDVRQEIPERRLALEQWA 402 >ref|NP_892074.1|partitioning protein SpyA Length = 389 Score = 80.9 bits (198), Expect = 3e-13 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 5/210 (2%) Frame = +2 Query: 1444472 EEARIWVQKVSDIYQTPLVTRLKEPDGK---IIITAQLKGGSAKTTTTMCLAQGLSLRGR 1444642 + A +Q+++D+ + TR K PDG+ ++ A KGG+ KT+T++ AQ L+L+G Sbjct: 78 QRAGYTIQQINDL-RDHFGTRWKRPDGQDPVVLAIAAHKGGAYKTSTSVHTAQWLALQGL 136 Query: 1444643 KVLVLDL-DPQASLSELCGLYAEKDVTPEDTVLPYIYDQEIEGGLEARVQSTYWDGIDVI 1444819 +VL++D DPQA+ S G + + ++T+LPY Y E + + A ++ T W +D+I Sbjct: 137 RVLLIDATDPQATASLYHGYVPDLHIHEDETLLPY-YLGERDDAMYA-IKPTCWPNLDII 194 Query: 1444820 PAHTELIGAEFHL-PAMQKMRPGFRFWTVLRQGLEPLRKKYDYILMDTSPSLSYXXXXXX 1444996 P+ + E L P + +LR +E + YD +++D++P+L Sbjct: 195 PSCLAIHRIESELYPLHDAEKLPVAPHMMLRAAIESVWDSYDVVVLDSAPNLGIGTINVV 254 Query: 1444997 XXXXXXXXXXXXENLDFISSLSFWRLFSDV 1445086 E D++S+L F+ + D+ Sbjct: 255 CAADVIVVPTPAELYDYVSTLQFFTMLRDL 284 >ref|NP_848235.1|integrase Length = 416 Score = 78.2 bits (191), Expect = 2e-12 Identities = 110/396 (27%), Positives = 159/396 (40%), Gaps = 29/396 (7%) Frame = +1 Query: 433627 DGGGLYLQVSPAGARS--WVYRFXXXXXXXXXXXXXXXXVSLADARERAQQCRRQLGCGL 433800 D GLY+ V +G+ S + YR +SLA+ARE ++ L G Sbjct: 21 DRDGLYVAVLTSGSVSFRYDYRINGRRETLVIGQYGCDGISLAEAREELIAAKKLLKAGH 80 Query: 433801 DPIEERRKEQAQRAAQLARTKTFDECTTAYIRANRAGWKNEKHVAQWEST-------LDT 433959 P +R ++ +TF T +Y+ KHV +ST + Sbjct: 81 SPAAAKR----DGIKKIHGAETFAVHTDSYM----------KHVILADSTRAMKQAVIKR 126 Query: 433960 YASPVIGKLPVRDIDTTHIVRVL--QPVWEAKPETASRVRGRIESVLDWATAHKYREGEN 434133 PV+G + +I TT +VR L + V TA + R I SV +A + N Sbjct: 127 DIMPVLGNKMMAEI-TTGMVRDLCDRIVERGGRATAVQAREIISSVYRYANDRGHGLF-N 184 Query: 434134 PARWKGHLDKILPARTKVRKVQHHXXXXXXXXXXXXXXXXXXEGLAAR-ALELVILTAAR 434310 PA I P+ + K + + AL+LV+LT R Sbjct: 185 PAA------DIKPSSIAMFKPRDRTLQPEEIGVFFRALDHIGTMATMKLALKLVLLTLVR 238 Query: 434311 TNEVIGATRSEFDLDAGMWTVPAQRMKAQRAHRIPLSETALDLVRRL-LDGVQDELLFPG 434487 +E +T SE D W +P+ RMK RAH I L + A DL+ L + E L PG Sbjct: 239 KSEFTHSTWSEVDFKKWTWIIPSDRMKGSRAHVIYLPKQAQDLMVGLQMCAGGSEYLLPG 298 Query: 434488 A-KKGKPLSNMAMLTVLRRMKRT---------DLTVHGFRSTFRDWAAECTTYPNEMAEM 434637 KPLSN A+ ++ + + +VH R T E YP++ E Sbjct: 299 RYSVSKPLSNAALNRLINVTVESVNDAGGYLDNFSVHDLRRTASTLLHE-AGYPSDWIEK 357 Query: 434638 ALAH------AVDDKVEAAYRRGDMFQRRRQMMDDW 434727 ALAH AV +K E A +R M Q+ M+D W Sbjct: 358 ALAHEQKGVRAVYNKAEYARQRAYMLQQWADMVDAW 393 Score = 70.1 bits (170), Expect = 4e-10 Identities = 104/388 (26%), Positives = 161/388 (41%), Gaps = 21/388 (5%) Frame = +2 Query: 435380 DGGGLYLQVSTARTRS--WVYXXXXXXXXXXXXXXXXHAMSLADARETAAQYRKMLLEGI 435553 D GLY+ V T+ + S + Y +SLA+ARE +K+L G Sbjct: 21 DRDGLYVAVLTSGSVSFRYDYRINGRRETLVIGQYGCDGISLAEAREELIAAKKLLKAGH 80 Query: 435554 DPIESRRAERMLQHAAAAHSRTFDECSRAFIRANRAGWKSEKHAMQWENTLGTYASPVIG 435733 P ++R H A + D + I A+ ++ K A+ + + PV+G Sbjct: 81 SPAAAKRDGIKKIHGAETFAVHTDSYMKHVILADST--RAMKQAVIKRDIM-----PVLG 133 Query: 435734 PLPARDIDTALVVRVLEPIWQVKPETASRVRGRIESVLDWATVHRYREGENPARWKGHLD 435913 +I T +V + + I + + A+ V+ R E + ++V+RY + D Sbjct: 134 NKMMAEITTGMVRDLCDRIVE-RGGRATAVQAR-EII---SSVYRYANDRGHGLFNPAAD 188 Query: 435914 KIFPXXXXXXXXXXXXXLPYAQVAAFMNALRAQEGLAAR--ALELLVLTAARTSEVIGAV 436087 I P P ++ F AL +A AL+L++LT R SE + Sbjct: 189 -IKPSSIAMFKPRDRTLQP-EEIGVFFRALDHIGTMATMKLALKLVLLTLVRKSEFTHST 246 Query: 436088 RGEFDLDAATWTVSAERMKAGRPHRIPLSGPALALVRGLLDGAEG-DLVFPGTRK-GRLL 436261 E D TW + ++RMK R H I L A L+ GL A G + + PG + L Sbjct: 247 WSEVDFKKWTWIIPSDRMKGSRAHVIYLPKQAQDLMVGLQMCAGGSEYLLPGRYSVSKPL 306 Query: 436262 SNMAMLTVL----RRMKIAG-----LTVHGFRSTFRDWAAECTRYPNEMAEMALAH---- 436402 SN A+ ++ + AG +VH R T E YP++ E ALAH Sbjct: 307 SNAALNRLINVTVESVNDAGGYLDNFSVHDLRRTASTLLHE-AGYPSDWIEKALAHEQKG 365 Query: 436403 --AVDDKVEAAYRRGDMFQRRKQMMDDW 436480 AV +K E A +R M Q+ M+D W Sbjct: 366 VRAVYNKAEYARQRAYMLQQWADMVDAW 393 Score = 49.3 bits (116), Expect = 8e-04 Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 21/363 (5%) Frame = +2 Query: 1240832 LTKSAIDAAQPQAQPVELRDTLVPGFMCKVTPAGRKVFMLQYRTNAGERRKPAIGLYG-- 1241005 LT + + +PQ + ++ D G V +G F YR N G R IG YG Sbjct: 2 LTDTKLKNLKPQDKLYKVSDR--DGLYVAVLTSGSVSFRYDYRIN-GRRETLVIGQYGCD 58 Query: 1241006 ELTVEQARSLAQTWLAEVRRGGDPGGDKAEARKAPTVKELCGRFMSDYSK-VRNKPSTQK 1241182 +++ +AR ++ G P K + K E Y K V ST+ Sbjct: 59 GISLAEAREELIAAKKLLKAGHSPAAAKRDGIKKIHGAETFAVHTDSYMKHVILADSTRA 118 Query: 1241183 GYQGNIDRNIIPILGRMKVQDVKRPDVATMMKKL-----ESTPMEANHTLAVMRKMFNMA 1241347 Q I R+I+P+LG + ++ V + ++ +T ++A ++ + + N Sbjct: 119 MKQAVIKRDIMPVLGNKMMAEITTGMVRDLCDRIVERGGRATAVQAREIISSVYRYAND- 177 Query: 1241348 EIWGLRTDGT-NPCRHIPQYPQG---KTTRLITDEEMGKLFRHLDKVEAESSEPPIVTLA 1241515 R G NP I R + EE+G FR LD + ++ + LA Sbjct: 178 -----RGHGLFNPAADIKPSSIAMFKPRDRTLQPEEIGVFFRALDHIGTMAT----MKLA 228 Query: 1241516 IRLQFEFAARRSEILLLEWTWVDLENRRVAWPDSKTGGMSKP---MSEEAHRLLSTVPR- 1241683 ++L R+SE W+ VD + P + G + ++A L+ + Sbjct: 229 LKLVLLTLVRKSEFTHSTWSEVDFKKWTWIIPSDRMKGSRAHVIYLPKQAQDLMVGLQMC 288 Query: 1241684 HEGSLYVLP---SLRDPLKHMTNGEHYNGWSRILKAAG--VQHVGTHGIRHRSATDIANS 1241848 GS Y+LP S+ PL + N + AG + + H +R ++T + + Sbjct: 289 AGGSEYLLPGRYSVSKPLSNAALNRLINVTVESVNDAGGYLDNFSVHDLRRTASTLLHEA 348 Query: 1241849 GIP 1241857 G P Sbjct: 349 GYP 351 >ref|YP_164275.1|DNA adenine methyltransferase Length = 284 Score = 76.3 bits (186), Expect = 6e-12 Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 18/226 (7%) Frame = +1 Query: 484711 PIIPWIGGKRRLADILIPRFPPHRCYVEVFAGAAALFFMRPAAXXXXXXXXXXXXINLYR 484890 PI+ + GGK LA +I PH Y+E F GAA++ + + +NL+R Sbjct: 6 PILRYHGGKWLLAPWIIQHLAPHHTYIEPFGGAASVLLRKARSYAEVYNDLDGDVVNLFR 65 Query: 484891 VVQHHLEEFVRQFKWALSSREVFRWLSDTPPHTLTDIQRAARFYYLQQNCFG-GRVEGRT 485067 V + EE + +RE F + T ++RA R FG G Sbjct: 66 VARDRGEELRQALALTPFAREEF---EASYAETTDPLERARRMVVRSFQGFGSAAASGER 122 Query: 485068 FGTATTS-----PPGLNLLRLEETLSAAHLRLSGAYIEKLDWQTCVARYDRPHTFFYLDP 485232 G +TS P L+ + L++ RL G IE D + +DRP T Y+DP Sbjct: 123 TGFRSTSARSGTAPALDWRNYPDALASITERLQGVVIENRDALVLMEHHDRPSTLHYVDP 182 Query: 485233 PYWET------------EGYGVPFEFGQYERMAVVLKELQGRAILT 485334 PY + + Y + Q+ +A LK L G +L+ Sbjct: 183 PYVHSTRSTKVRHNATGKSYRHELDDNQHRDLAAFLKGLTGMVVLS 228 >ref|NP_037691.1|IS903 transposase Length = 307 Score = 75.5 bits (184), Expect = 1e-11 Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 3/277 (1%) Frame = -2 Query: 705734 ESYQKGVSGRESVYTPAYVSLLFMLYRMHRLGLREFAGFMHDYWRGRGVALPVASFGHLS 705555 ES GR Y+ ++ + ++ R+ RL LR GF+ + V L + +S Sbjct: 38 ESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFSLMNVPLRCPDYSCVS 97 Query: 705554 DLFAALDMTIRKQCARAAERLKEGEPVTVIVDSTGLRFSHAGAWYEKKYGKQAPCTPWRV 705375 +++++ + GE +++DSTGL+ G W KK+G++ WR Sbjct: 98 RRAKSVNVSFKTPT--------RGEIAHLVIDSTGLKVFGEGEWKVKKHGQERR-RIWRK 148 Query: 705374 MHLAMDAE-GDVLAGEITDTETGDSSGLDVLLPQV-GEIDRLIVDTAYYQIERNEQLPAS 705201 +HLA+D++ +++ +++ DS L+ Q +I D AY +++L Sbjct: 149 LHLAVDSKTHEIICADLSLNNVTDSEAFPGLIRQTHRKIRSAAADGAYDTRLCHDELRRK 208 Query: 705200 GVVPVIPPKSDAVDDPDQNRWHDQLVCYRNEKGQYA-FQNKYGYGLRARVEAQFSRIKRC 705024 + +IPP+ A P + ++ V + G A ++ Y R+ E R+K+ Sbjct: 209 KISALIPPRKGAGYWPGEYADRNRAVANQRMTGSNARWKWTTDYNRRSIAETAMYRVKQL 268 Query: 705023 LGDALLTRRIASQVQEGLVIANLINQWNSFGQARCVK 704913 G +L R QV E + + +N+ G V+ Sbjct: 269 FGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVR 305 >ref|NP_040341.1|putative transposase Length = 322 Score = 73.2 bits (178), Expect = 5e-11 Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 7/300 (2%) Frame = -2 Query: 769037 SIRAIAHQLNRAPSTISREIARNGGTGHYRALEADERALQTALRPKHCILKQNRRLRYAV 768858 +I AIA LNR STI REI R Y A ++D+ + K N+R ++ Sbjct: 30 NISAIAKYLNRHRSTILREIKRFKTIDEYSAYKSDKMYYEKRK-------KNNKRFKFTE 82 Query: 768857 ER----KLRREWSPEQVSGWLKNRYANDEA-MRVSHETIYRSLFVQARGVLKKELQYHLR 768693 E+ LR + S + + + V +T+Y+ + + G LK+ L++H + Sbjct: 83 EQLNFIHLRFNVYHDSPSELIYRYFLKFKVKFPVCVKTLYKWIRLGFYGFLKQNLRHHGK 142 Query: 768692 TQRKMRHSRFSSTKGARNKIADAVSIHERPPEVADRAVPGHWEGDLVSGASN-THVATLV 768516 ++ S R K+ D SI + +V++ G E D V G + + + LV Sbjct: 143 KYKRKGKS------DNRGKLTDFKSIWDIDNKVSN---VGWLEMDTVVGKDHKSAILVLV 193 Query: 768515 ERRSRFTIIVKVKGKDTVSVVAGLKREV-KRLPQHLRKSLTWDRDMELANHKDFTIATDV 768339 E+ S+ +K++ V K + K K + DR E + ++ I + Sbjct: 194 EQLSKKYFAIKLENHTAREVEKKFKDIIIKNNLIGKIKGIITDRRKEFSKWREMEIFAET 253 Query: 768338 KVYFCDPRSPWQRGTNENTNRLLRQYLPHGTQLDHYSQADLNKIAARLNERPRKTLGFRS 768159 +VYFCD SP Q+ E N LR + P GT + SQ ++ + +N++ R L + S Sbjct: 254 QVYFCDAGSPQQKPLIEYMNSELRHWFPKGTDFNKVSQKQIDWVVNVINDKLRPCLNWIS 313 >ref|NP_852580.1|DNA integration Length = 180 Score = 73.2 bits (178), Expect = 5e-11 Identities = 47/161 (29%), Positives = 90/161 (55%) Frame = +1 Query: 843013 NVRELAMFNLAIDSKLRACDLTRLQVRDVHHGSHVAARATVMQQKTQRPVQFEITEQTRE 843192 ++R +F + I++ LR D+ +L+V DV GSH++ R ++KT + + +IT + Sbjct: 24 SLRNYILFIMGINTGLRISDILKLKVGDVK-GSHISMR----EEKTGKQKRIQITAALKR 78 Query: 843193 SLEAWIEARGLKEADFLFPSRLHTSPHLSTRQYARMVHRWVASIGLDDTAYGTHTMRRTK 843372 L+ +IE R ++ ++L SR + + +++ A GLD+ GTHT+R+T Sbjct: 79 ELKWFIEER--EDNEYLLQSRQGRNRPIGRSMAYKILSGAAADFGLDEI--GTHTLRKTY 134 Query: 843373 ASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMA 843495 +Y +TKN+ + + H+ + T+RY+G+ DA++ A Sbjct: 135 GYHMYMQTKNIALLMEIFNHSSEKVTLRYIGVN-QDAMDKA 174 Score = 43.1 bits (100), Expect = 0.058 Identities = 22/68 (32%), Positives = 38/68 (55%) Frame = -1 Query: 1373427 LNSSGARRIVHRWVASIGLDDTACGTHTMRRTKASLIYRRTKNLRAVQLLLGHTKLESIV 1373248 + S A +I+ A GLD+ GTHT+R+T +Y +TKN+ + + H+ + + Sbjct: 104 IGRSMAYKILSGAAADFGLDEI--GTHTLRKTYGYHMYMQTKNIALLMEIFNHSSEKVTL 161 Query: 1373247 RYLGIEVD 1373224 RY+G+ D Sbjct: 162 RYIGVNQD 169 Score = 40.8 bits (94), Expect = 0.29 Identities = 29/117 (24%), Positives = 57/117 (48%) Frame = -3 Query: 1372039 ETQRPVQFEITEQTRTSVEAWIRAAALASGDYLFPSRIHGSPHISTRQYARLVHRWIRSI 1371860 +T + + +IT + ++ +I +YL SR + I +++ Sbjct: 63 KTGKQKRIQITAALKRELKWFIEERE--DNEYLLQSRQGRNRPIGRSMAYKILSGAAADF 120 Query: 1371859 GLDDTGYGTHTRRRTKASLIYRRTKNLRAVQLLLGHTELESTVCYLGIDVDDALEMA 1371689 GLD+ G THT R+T +Y +TKN+ + + H+ + T+ Y+G++ DA++ A Sbjct: 121 GLDEIG--THTLRKTYGYHMYMQTKNIALLMEIFNHSSEKVTLRYIGVN-QDAMDKA 174 >ref|NP_511017.1|methylase Length = 270 Score = 67.8 bits (164), Expect = 2e-09 Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 9/216 (4%) Frame = +1 Query: 484714 IIPWIGGKRRLADILIPRFPPHRCYVEVFAGAAALFFMRPAAXXXXXXXXXXXXINLYRV 484893 I+ + G K LAD++I P H+ Y+E F G+ A+F + A +NL++ Sbjct: 4 ILNYPGSKWSLADLIIDNMPEHKSYLEPFCGSCAVFMNKQKATLETINDLDSRLVNLFKA 63 Query: 484894 VQHHLEEFVRQFKWALSSREVFRWLSDTPPHTLTDIQR-AARFYYLQQNCFGGRVEGRTF 485070 ++ + E+ L SRE + + +L D +R A R ++ GG+ Sbjct: 64 MRDNPEKLQYLIMHTLYSREEYMLSHEISSDSLEDARRMAVRLWF----AVGGKTNANVG 119 Query: 485071 GTATTSPPG----LNLLRLEETLSAAHLRLSGAYIEKLDWQTCVARYDRPHTFFYLDPPY 485238 S G + + A RL A IE +D + +++ T Y DPPY Sbjct: 120 FRKNVSWNGPYNAYEWNDMYNRIGIAAARLKDAQIENVDAIKLIEQHNDKDTLIYCDPPY 179 Query: 485239 WETE----GYGVPFEFGQYERMAVVLKELQGRAILT 485334 T Y F Q++ + VLK +G+ +L+ Sbjct: 180 IPTSLVSPHYQHDFSLEQHKELLKVLKNHEGKVMLS 215 >ref|NP_795396.1|site-specific recombinase Length = 191 Score = 67.0 bits (162), Expect = 4e-09 Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 11/169 (6%) Frame = +1 Query: 843013 NVRELAMFNLAIDSKLRACDLTRLQVRDVHHGSHVAARATVMQQKTQRPVQFEITEQTRE 843192 N R + +++ LR D+ L+V+DV G+++ +++QKT + +F I + R Sbjct: 24 NPRNFLLLLFGLNTGLRIGDILPLKVKDVTAGNYI----DIIEQKTGKQKRFPINKTLRR 79 Query: 843193 SLEAWIEARGLKEADFLFPSRLH-TSPH-------LSTRQYARMVHRWVASIGLDDTAYG 843348 ++ +I+ + LK D+LF S+ T P +S Q +++++ G+ G Sbjct: 80 EIDKYIKDKQLKPWDYLFESQKKCTEPGKEGQKKPISREQAWKILNKAAKQFGIHHI--G 137 Query: 843349 THTMRRTKASLIYRRTKNLRAVQLLLGHTKLESTVRYLGI---EVDDAL 843486 TH+MR++ +Y++T+++ + + H+ + T+RY+GI +DDA+ Sbjct: 138 THSMRKSFGYHMYQKTQDIAMLMEMFNHSSPDITLRYIGINQERIDDAV 186 Score = 44.7 bits (104), Expect = 0.020 Identities = 29/125 (23%), Positives = 63/125 (50%), Gaps = 11/125 (8%) Frame = -3 Query: 1372039 ETQRPVQFEITEQTRTSVEAWIRAAALASGDYLF--------PSRIHGSPHISTRQYARL 1371884 +T + +F I + R ++ +I+ L DYLF P + IS Q ++ Sbjct: 64 KTGKQKRFPINKTLRREIDKYIKDKQLKPWDYLFESQKKCTEPGKEGQKKPISREQAWKI 123 Query: 1371883 VHRWIRSIGLDDTGYGTHTRRRTKASLIYRRTKNLRAVQLLLGHTELESTVCYLGID--- 1371713 +++ + G+ G TH+ R++ +Y++T+++ + + H+ + T+ Y+GI+ Sbjct: 124 LNKAAKQFGIHHIG--THSMRKSFGYHMYQKTQDIAMLMEMFNHSSPDITLRYIGINQER 181 Query: 1371712 VDDAL 1371698 +DDA+ Sbjct: 182 IDDAV 186 Score = 41.2 bits (95), Expect = 0.22 Identities = 34/170 (20%), Positives = 73/170 (42%), Gaps = 9/170 (5%) Frame = -1 Query: 853026 NLKHQTALSVAYGAGLRASEVVALKVTDIDSQRMTLRIEQGKGRRDRYAMLSPVLLE--- 852856 N ++ L GLR +++ LKV D+ + IEQ G++ R+ + + E Sbjct: 24 NPRNFLLLLFGLNTGLRIGDILPLKVKDVTAGNYIDIIEQKTGKQKRFPINKTLRREIDK 83 Query: 852855 -----RLRVWWHVARAQGRMPDGGWLFPGLD-PVDPLSTRQLNRXXXXXXXXAQIDKRVS 852694 +L+ W ++ +Q + + PG + P+S Q + I + Sbjct: 84 YIKDKQLKPWDYLFESQKKCTE-----PGKEGQKKPISREQAWKILNKAAKQFGI-HHIG 137 Query: 852693 MHTLRHSFATHLLEQKVDIRVIQVLLGHAKLENTALYVQVATDLLHEVTS 852544 H++R SF H+ ++ DI ++ + H+ + T Y+ + + + + + Sbjct: 138 THSMRKSFGYHMYQKTQDIAMLMEMFNHSSPDITLRYIGINQERIDDAVA 187 >ref|YP_006605.1|Gp25 Length = 387 Score = 66.2 bits (160), Expect = 6e-09 Identities = 76/377 (20%), Positives = 164/377 (43%), Gaps = 16/377 (4%) Frame = +2 Query: 1444310 APRPRKTAPVFKTGEIAEMCNISHSQVQYLATKGDGDLPXXXXXXXXXXXX---FTLEEA 1444480 +P RK + E+A++ +S ++ + +G LP +T+++ Sbjct: 30 SPEARKITRRWGITEVADLIGVSPQAIR--DAEKNGRLPPPDFELRGRVERRAGYTIDQ- 86 Query: 1444481 RIWVQKVSDIYQTPLVTRLKEPDGKIIITAQLKGGSAKTTTTMCLAQGLSLRGRKVLVLD 1444660 + + +I+ P R + + ++ KGG KT++ + AQ L+L+G +VL+++ Sbjct: 87 ---ISHMRNIFGNPN-QRPADKNPAVLAVMSHKGGVYKTSSAVHEAQWLALQGHRVLLIE 142 Query: 1444661 -LDPQASLSELCGLYAEKDVTPEDTVLPYIYDQEIEGGLEARVQSTYWDGIDVIPA---- 1444825 DPQ + S G + + +DT+LP+ + E ++ T W G+D+IP+ Sbjct: 143 GNDPQGTASMYHGYVPDLHIHADDTLLPFYLGE--RDNAEYAIKPTCWPGLDIIPSCLAL 200 Query: 1444826 ---HTELIGAEFHLPAMQKMRPGFRFWTVLRQGLEPLRKKYDYILMDTSPSLSYXXXXXX 1444996 T+L+ ++H P +LR +E + YD I++D++P+L Sbjct: 201 HRIETDLM--QYHAQGKLPHPPHL----MLRAAIESVWDNYDIIVIDSAPNLGTGTINVV 254 Query: 1444997 XXXXXXXXXXXXENLDFISSLSFWRLFSDVSKSFIKYEKDKKYDFVSLILSRVDYGRNSS 1445176 E D+ S L F+ + D+ K+ + V L+L++ + Sbjct: 255 CAADIIVVATPAELFDYSSVLQFFTMLLDLLKT---VDLGGFEPVVRLLLTKYSLTTGNQ 311 Query: 1445177 APIVRAWAQSAYENWLHSIEVPASSVMSTGALAFSTVFDIS----STHSASKSLQRVRQP 1445344 + + ++ + + + V + + G + TVF+ + ST +A ++ + +P Sbjct: 312 SRWMEEQIRNTWGSMVLRQVVRVTDEVGKGQIKMRTVFEQAAYQRSTLNAWRNAVSIWEP 371 Query: 1445345 LIDYCRWV-DEIYSEKW 1445392 + C+ + D++ +W Sbjct: 372 V---CQEIFDDLIKPRW 385 >ref|NP_817650.1|gp61 Length = 274 Score = 65.9 bits (159), Expect = 8e-09 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 10/218 (4%) Frame = +1 Query: 1468903 IKSNGTRIHVVQRGSGELALVFLHYYGGSSRTWDEVASELSDR-YRIVATDHRGWGASEA 1469079 + +G R+ V Q G+G + LVFLH S+ ++E+ EL+ R + + A D G +++ Sbjct: 9 VLDDGFRVGVSQVGTG-VPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDS 67 Query: 1469080 PADGYRIADLAADAEGVIEALGLRRYVLVGHSMGGKVAQLIASRRPGGLEGLVLV--APS 1469253 G+ + ++ ++ALG+ + V VGHSMGG + IA R P + +L+ A Sbjct: 68 LPFGHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDAAAG 127 Query: 1469254 PPSPTPLSDEQRAT--LTGAYQSRESVEFVIDHVLTAKSLTAAHR----EQVIEDSLRGA 1469415 L D RAT L+GA V V+ A L +A Q + S G Sbjct: 128 KEHHANLKDPLRATQRLSGA------VVDVLGDTYQAIKLRSATEGLGLAQTLRSSFAGF 181 Query: 1469416 PQAKAAWPNV-AMREDITAAVALIDAPTIIISGELDQV 1469526 +AA+ + A E + A+ +D T +I G DQ+ Sbjct: 182 RFVRAAYALLKADTEPLLKAMKALDVQTAVIHGLSDQI 219 Score = 49.7 bits (117), Expect = 6e-04 Identities = 32/102 (31%), Positives = 50/102 (49%) Frame = +1 Query: 711556 GPVVVLLHGLSARADRWKHNLDALGQAGVRAMAIDLPGHGFASKHEDFDYSAHGYSRWLD 711735 G +V LHGL+ A ++ L L Q G A+D HG + F ++ +R Sbjct: 24 GVPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHG-RTDSLPFGHTVEEMTRVTL 82 Query: 711736 QFVQTLGVEKLVLVGTSFGGFVAAHYAADHPERVAGLMAVGA 711861 + + LG+++ V VG S GG + A A +PERV + + A Sbjct: 83 RALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDA 124 Score = 45.4 bits (106), Expect = 0.012 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 1/112 (0%) Frame = +1 Query: 1058731 GVRTRFVEAGETGAPVLMMLHGTGANWEIFSSNLDAHAKH-FHCFALDLLGHGFTEKPPG 1058907 G R + G TG P L+ LHG + + L A+ F ALD + HG T+ P Sbjct: 13 GFRVGVSQVG-TGVP-LVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDSLPF 70 Query: 1058908 AYEIKDYLSHLLNFMDIQRVPSASFIGTSLGSWLSVKLAAQLPDRVDRLVLL 1059063 + +++ L +D + A F+G S+G + ++A + P+RV +LL Sbjct: 71 GHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILL 122 Score = 45.4 bits (106), Expect = 0.012 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%) Frame = -3 Query: 1244788 FNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVM 1244609 F + ++ G G ++ LHG A + + G+ V D+ ++D++ Sbjct: 14 FRVGVSQVGTGVPLVFLHGLTVSALAYEELLIELA---QRGFAVTALDAVNHGRTDSLPF 70 Query: 1244608 D---EQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLILM 1244450 E+ V RA +DAL ID+A VG+SMGG A YP+R+ IL+ Sbjct: 71 GHTVEEMTRVTLRA----LDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILL 122 Score = 41.2 bits (95), Expect = 0.22 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Frame = -1 Query: 1038282 LIMLHG---TAGSHEGFCANLGAHAEHFNCFAIDLVGAGLTDKPDHDYEISTYVTHVLDF 1038112 L+ LHG +A ++E L F A+D V G TD + + L Sbjct: 27 LVFLHGLTVSALAYEELLIELAQRG--FAVTALDAVNHGRTDSLPFGHTVEEMTRVTLRA 84 Query: 1038111 MRAMKIERASFIGVSLGTWVAARFALQYPERV 1038016 + A+ I++A F+G S+G + A A +YPERV Sbjct: 85 LDALGIDQAVFVGHSMGGGMVAEIAPRYPERV 116 >ref|NP_463492.1|putative integrase Length = 452 Score = 65.1 bits (157), Expect = 1e-08 Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 11/129 (8%) Frame = +2 Query: 1270589 YARVSTHEQ----SLALQLDALRAAGCNK------FFTDHGVSGTVFCRRGLDAALDAAK 1270738 Y RVST EQ S+ Q + L A +K F D G SG+ R L+ L Sbjct: 6 YIRVSTQEQVENYSIQAQTEKLTALCRSKDWDVYDIFIDGGYSGSNMNRPALNEMLSKLH 65 Query: 1270739 EGDTLVVWRLDRLGRSLSKLVDLIT-HLERRGIEFVSLNESINTSSSGGVLIFHMMAALA 1270915 E D +VV+RLDRL RS + LI + + +EFVSL+E+++TSS G + +++ A Sbjct: 66 EIDAVVVYRLDRLSRSQRDTITLIEEYFLKNNVEFVSLSETLDTSSPFGRAMIGILSVFA 125 Query: 1270916 EFERNLISE 1270942 + ER I + Sbjct: 126 QLERETIRD 134 >ref|NP_862871.1|gp32 Length = 188 Score = 64.3 bits (155), Expect = 2e-08 Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 6/182 (3%) Frame = +1 Query: 842953 KPPLKLREIWAIRTRLQMASNVRELAMFNLAIDSKLRACDLTRLQVRDVHHGSHVAARAT 843132 +P +L +I ++ L+ S R + + S +R D+ LQV+ V R Sbjct: 5 EPIRELDDIERMKDFLKSKSE-RNYVLIMCGLYSGMRISDIIPLQVKQV-----TGDRIE 58 Query: 843133 VMQQKTQRPVQFEITEQTRESLEAWIEARGLKEADFLFPSRLHTSP------HLSTRQYA 843294 V+++KT + +F I + R++L +I+A L+ D+LFPS+ H+ Sbjct: 59 VIEKKTGKVKRFAINPELRKALNHYIKANDLQGYDYLFPSKKKVRTDGVRIAHIGRVAAY 118 Query: 843295 RMVHRWVASIGLDDTAYGTHTMRRTKASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIEV 843474 +++ + +GL + GTH+MR++ YRR +N+ + L H+ + T+ Y+GI+ Sbjct: 119 QILKQAAEHVGLKNI--GTHSMRKSFGYHHYRRNQNVAILMELFNHSSPDITLDYIGIKQ 176 Query: 843475 DD 843480 D+ Sbjct: 177 DE 178 Score = 47.4 bits (111), Expect = 0.003 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 6/118 (5%) Frame = -3 Query: 1372039 ETQRPVQFEITEQTRTSVEAWIRAAALASGDYLFPS----RIHGS--PHISTRQYARLVH 1371878 +T + +F I + R ++ +I+A L DYLFPS R G HI +++ Sbjct: 63 KTGKVKRFAINPELRKALNHYIKANDLQGYDYLFPSKKKVRTDGVRIAHIGRVAAYQILK 122 Query: 1371877 RWIRSIGLDDTGYGTHTRRRTKASLIYRRTKNLRAVQLLLGHTELESTVCYLGIDVDD 1371704 + +GL + G TH+ R++ YRR +N+ + L H+ + T+ Y+GI D+ Sbjct: 123 QAAEHVGLKNIG--THSMRKSFGYHHYRRNQNVAILMELFNHSSPDITLDYIGIKQDE 178 >ref|NP_046923.1|gp28 Length = 387 Score = 63.9 bits (154), Expect = 3e-08 Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 11/194 (5%) Frame = +2 Query: 1444538 KEPDGK---IIITAQLKGGSAKTTTTMCLAQGLSLRGRKVLVLD-LDPQASLSELCGLYA 1444705 + PD K ++ KGG KT++ + AQ L+L+G +VL+++ DPQ + S G Sbjct: 99 QRPDDKNPVVLSVMSHKGGVYKTSSAVHQAQWLALQGHRVLLVEGNDPQGTASMYHGYVP 158 Query: 1444706 EKDVTPEDTVLPYIYDQEIEGGLEARVQSTYWDGIDVIPA-------HTELIGAEFHLPA 1444864 + + +DT+LP+ + E ++ T W G+D+IP+ T+L+ ++H Sbjct: 159 DLHIHADDTLLPFYLGK--RDNAEYAIKPTCWPGLDIIPSCLALHRIETDLM--QYHSEG 214 Query: 1444865 MQKMRPGFRFWTVLRQGLEPLRKKYDYILMDTSPSLSYXXXXXXXXXXXXXXXXXXENLD 1445044 P +LR +E + YD I++D++P+L E D Sbjct: 215 KLPHPPHL----MLRAAIESVWDNYDIIVIDSAPNLGTGTINVVCAADVIVVATPAELFD 270 Query: 1445045 FISSLSFWRLFSDV 1445086 + S L F+ + D+ Sbjct: 271 YASVLQFFTMLLDL 284 >ref|NP_061635.1|transposase Length = 548 Score = 63.5 bits (153), Expect = 4e-08 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 2/100 (2%) Frame = -2 Query: 786635 GRPSYHPAVLLKIYIYGYLNRVQSSRRLERECQRNVELMWLTGRLAPDFKTIAEFR--RS 786462 G SYHP ++LKI +Y Y V S RR+E+ ++ +MWL P +KTI FR + Sbjct: 49 GATSYHPKMMLKIILYAYTQSVFSGRRIEKLLHDSIRMMWLAQNQTPSYKTINRFRVNPN 108 Query: 786461 NDEGIRNVCRRFVMICRDLKLFTQAVVAIDGSKFKAVNSR 786342 D I ++ +F C L + + IDG+K +A +R Sbjct: 109 TDALIESLFIQFHSQCLKQNLIDDSSIFIDGTKVEANANR 148 >ref|NP_112664.1|INT Length = 485 Score = 63.2 bits (152), Expect = 5e-08 Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 14/132 (10%) Frame = +2 Query: 1270589 YARVSTHEQ-----SLALQLDAL----RAAG--CNKFFTDHGVSGTVFCRRGLDAALDAA 1270735 Y RVST Q S+ Q+D L A G + +TD G SG R + ++ Sbjct: 8 YTRVSTTNQAEEGFSIDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKLERPAMQRLINDI 67 Query: 1270736 --KEGDTLVVWRLDRLGRSLSKLVDLITHL-ERRGIEFVSLNESINTSSSGGVLIFHMMA 1270906 K DT++V++LDRL RS+ + L+ + + I+F+SLNESI+TSS+ G L +++ Sbjct: 68 ENKAFDTVLVYKLDRLSRSVRDTLYLVKDVFTKNKIDFISLNESIDTSSAMGSLFLTILS 127 Query: 1270907 ALAEFERNLISE 1270942 A+ EFER I E Sbjct: 128 AINEFERENIKE 139 Score = 47.0 bits (110), Expect = 0.004 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Frame = +3 Query: 1265547 DTLVVWKLDRLGRDLRHLINTVHDL-TGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAAL 1265723 DT++V+KLDRL R +R + V D+ T I L +IDT++A G L I +A+ Sbjct: 73 DTVLVYKLDRLSRSVRDTLYLVKDVFTKNKIDFISLN---ESIDTSSAMGSLFLTILSAI 129 Query: 1265724 AEFERELIAER 1265756 EFERE I ER Sbjct: 130 NEFERENIKER 140 >ref|NP_690785.1|site-specific recombinase for integration and excision Length = 474 Score = 62.8 bits (151), Expect = 7e-08 Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 13/131 (9%) Frame = +2 Query: 1270589 YARVSTHEQ-----SLALQLDALRAAGCN------KFFTDHGVSGTVFCRRGLDAALDAA 1270735 Y RVST EQ S++ Q + L+A + KF+ D G S R L+ L Sbjct: 15 YVRVSTEEQAKEGYSISAQKEKLKAYCISQGWDSYKFYIDEGKSAKDIHRPSLELMLRHI 74 Query: 1270736 KEG--DTLVVWRLDRLGRSLSKLVDLITHLERRGIEFVSLNESINTSSSGGVLIFHMMAA 1270909 ++G DT++V+RLDRL RS+ L L+ + ++ F S E +T S+ G L ++AA Sbjct: 75 EQGIIDTVLVYRLDRLTRSVRDLYSLLDYFDKYQAVFRSATEVYDTGSATGRLFITLVAA 134 Query: 1270910 LAEFERNLISE 1270942 +A++ER + E Sbjct: 135 MAQWERENLGE 145 Score = 40.4 bits (93), Expect = 0.38 Identities = 30/93 (32%), Positives = 48/93 (51%) Frame = +3 Query: 1265478 RPSLRMPRMRAVPSGTATALRPGDTLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTG 1265657 RPSL + +R + G DT++V++LDRL R +R L + + + T Sbjct: 64 RPSLEL-MLRHIEQGII------DTVLVYRLDRLTRSVRDLYSLLDYFDKYQAVFRSAT- 115 Query: 1265658 HGAAIDTTTAAGKLVFGIFAALAEFERELIAER 1265756 DT +A G+L + AA+A++ERE + ER Sbjct: 116 --EVYDTGSATGRLFITLVAAMAQWERENLGER 146 >ref|YP_006528.1|ParA Length = 398 Score = 61.2 bits (147), Expect = 2e-07 Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 11/203 (5%) Frame = +2 Query: 1444490 VQKVSDIYQTPLVTRLKE--PDGKIIITAQLKGGSAKTTTTMCLAQG------LSLRGRK 1444645 +Q + DIY+ V + ++ + +I + LKGG +KT +T+ LA L + + Sbjct: 86 IQNIIDIYEHRGVPKYRDRYSEAYVIFISNLKGGVSKTVSTVSLAHAMRAHPHLLMEDLR 145 Query: 1444646 VLVLDLDPQASLSELCGLYAEKDVTPEDTVLPYIYDQEIEGGLEARVQSTYWDGIDVIPA 1444825 +LV+DLDPQ+S + + + + + E LE + + G+DV+PA Sbjct: 146 ILVIDLDPQSSATMFLSHKHSIGIVNATSAQAMLQNVSREELLEEFIVPSVVPGVDVMPA 205 Query: 1444826 HTE--LIGAEFHLPAMQKMRPGFRFWTVLRQG-LEPLRKKYDYILMDTSPSLSYXXXXXX 1444996 + I +++ + + PG VL++ ++ L+ YD+IL+D+ P L Sbjct: 206 SIDDAFIASDWRELCNEHL-PGQNIHAVLKENVIDKLKSDYDFILVDSGPHLDAFLKNAL 264 Query: 1444997 XXXXXXXXXXXXENLDFISSLSF 1445065 +DF SSL + Sbjct: 265 ASANILFTPLPPATVDFHSSLKY 287 >ref|NP_665964.1|putative plasmid partitioning protein Soj Length = 256 Score = 60.8 bits (146), Expect = 3e-07 Identities = 46/140 (32%), Positives = 69/140 (49%) Frame = +2 Query: 1444553 KIIITAQLKGGSAKTTTTMCLAQGLSLRGRKVLVLDLDPQASLSELCGLYAEKDVTPEDT 1444732 +I +T Q KGG+ KTTTT+ +A L+ G VLV+DLDPQ +E G D D+ Sbjct: 2 RIGVTNQ-KGGAGKTTTTLNVAGALNQLGNDVLVIDLDPQGHATEGLGFEDLYDDPERDS 60 Query: 1444733 VLPYIYDQEIEGGLEARVQSTYWDGIDVIPAHTELIGAEFHLPAMQKMRPGFRFWTVLRQ 1444912 + + + E LE V +D +P+H +I AE L + K L Sbjct: 61 LFDVLPELERMDELEQLV--VEHQEVDCVPSHETMINAEDALANVMKREER------LEM 112 Query: 1444913 GLEPLRKKYDYILMDTSPSL 1444972 L+ ++DY+L+D P+L Sbjct: 113 LLDDADGRWDYVLVDCPPNL 132 >ref|NP_046877.1|putative non-heme haloperoxidase Length = 278 Score = 58.9 bits (141), Expect = 1e-06 Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 12/220 (5%) Frame = +1 Query: 1468903 IKSNGTRIHVVQRGSGELALVFLHYYGGSSRTWDEVASELSDR-YRIVATDHRGWGASEA 1469079 + ++G R+ V G+G LVFLH S++ ++E+ + L++ +R++A D G S + Sbjct: 7 VLADGFRVGVSTVGTGA-PLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGS 65 Query: 1469080 PADGYRIADLAADAEGVIEALGLRRYVLVGHSMGGKVAQLIASRRPGGLEGLVLV--APS 1469253 G+ + D+ ++ L + R + GHSMGG + IA+R P + VL+ A Sbjct: 66 LPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAAG 125 Query: 1469254 PPSPTPLSDEQRATLT--GAYQSRESVEFVIDHVLTAKSLTAAHRE----QVIEDSLRGA 1469415 + ATL A + E+V ++ A L + ++ DS+ G Sbjct: 126 QEHHDNIKVGHYATLAFRAAKKLGEAVTDIVGDGYEAMHLRDTGEKLSFLGMLRDSVSGL 185 Query: 1469416 PQAKAAWPNVAMREDITA---AVALIDAPTIIISGELDQV 1469526 +AA+ M+ D T A+ PT ++ G DQ+ Sbjct: 186 RFVRAAF--ALMKADTTPLLHAMYRHGVPTAVLHGLHDQI 223 Score = 52.4 bits (124), Expect = 1e-04 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Frame = +1 Query: 1058764 TGAPVLMMLHGTGANWEIFSSNLDAHAKH-FHCFALDLLGHGFTEKPPGAYEIKDYLSHL 1058940 TGAP L+ LHG + + + L A+H F ALD HG + P + ++D Sbjct: 21 TGAP-LVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHTVEDMTRVT 79 Query: 1058941 LNFMDIQRVPSASFIGTSLGSWLSVKLAAQLPDRVDRLVLL 1059063 L +D + A F G S+G + V++AA+ P RV VLL Sbjct: 80 LKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLL 120 Score = 50.8 bits (120), Expect = 3e-04 Identities = 31/102 (30%), Positives = 48/102 (47%) Frame = +1 Query: 711556 GPVVVLLHGLSARADRWKHNLDALGQAGVRAMAIDLPGHGFASKHEDFDYSAHGYSRWLD 711735 G +V LHGLS A ++ L L + G R +A+D HG S ++ +R Sbjct: 22 GAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHG-RSGSLPTGHTVEDMTRVTL 80 Query: 711736 QFVQTLGVEKLVLVGTSFGGFVAAHYAADHPERVAGLMAVGA 711861 + + L + + + G S GG + AA HP RVA + + A Sbjct: 81 KTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDA 122 Score = 46.2 bits (108), Expect = 0.007 Identities = 30/113 (26%), Positives = 50/113 (44%) Frame = -3 Query: 1244788 FNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVM 1244609 F + + G G ++ LHG A + + + G+RVI D+ +S ++ Sbjct: 12 FRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLA---EHGFRVIALDAANHGRSGSLPT 68 Query: 1244608 DEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLILM 1244450 + +K L D LDI RA G+SMGG + A +P R+ +L+ Sbjct: 69 GHTVEDMTRVTLKTL-DELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLL 120 >ref|NP_612875.1|putative recombinase Length = 181 Score = 57.0 bits (136), Expect = 4e-06 Identities = 45/166 (27%), Positives = 81/166 (48%) Frame = +1 Query: 842974 EIWAIRTRLQMASNVRELAMFNLAIDSKLRACDLTRLQVRDVHHGSHVAARATVMQQKTQ 843153 ++ A+ +L+ S R MF + I S LR D+ RL+VRDV +A R ++KT Sbjct: 12 DVNALANKLRKDSE-RNYIMFIIGIYSGLRISDILRLRVRDVKGKEQIAIR----EKKTG 66 Query: 843154 RPVQFEITEQTRESLEAWIEARGLKEADFLFPSRLHTSPHLSTRQYARMVHRWVASIGLD 843333 + F I ++ L+ + + L E FL SR + + + ++ +G+ Sbjct: 67 KQKMFPINPILKKELKKYCSDKELDE--FLIKSRNGYNRAIGRERAYTILREAGEELGIY 124 Query: 843334 DTAYGTHTMRRTKASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIE 843471 + A THT+R+T Y + ++ +Q + H+ T+RY+G+E Sbjct: 125 NLA--THTLRKTFGYHYYMQYNDIAELQKIFNHSDPAVTLRYIGVE 168 >ref|NP_818239.1|gp188 Length = 318 Score = 55.8 bits (133), Expect = 9e-06 Identities = 68/286 (23%), Positives = 113/286 (39%), Gaps = 19/286 (6%) Frame = +2 Query: 69317 HWYRHAPAGMNEAQFVAYCVEELEKLIAQEGADTIAAFIAEPVMGTGGILPPPAGYWPAI 69496 ++ R PA + A++ +L + + AD++ AE G + W + Sbjct: 51 YYVRTGPASGHVARWPVEYARKLIDSLERPDADSLRVLYAEGGRDAGAVAFTQFPNWSLV 110 Query: 69497 QQVLKKHDIL------------------LICDEVVCGFGRLGSKMGAQHYGIAPDLITVA 69622 + ++ ++ ++ DE GFGRLG G Q YG PD I + Sbjct: 111 SLIDREGRLVAPEVVLDEVDRATKSGRTVVADESATGFGRLGRIWGHQAYGFTPDAI-IF 169 Query: 69623 KGLTSAYAPLSGVIVSEGVWDVIDKASQEFGAMGHGWTYSGHPICAAAALANLDILEREN 69802 G L GVI G +++D A G M +G P+ A A L + E Sbjct: 170 GGPAGGGLTLGGVI---GPAELLDDAF--VGPM------AGAPLACATGAATLAAINPE- 217 Query: 69803 LTQNAAQTGAYLLEQLHAAFDSH-PLVGEVRGAGMLAALEFMADKDGRQPFDAALKVGPR 69979 L ++ + G E+L A D + + G+G+ L+F R P ++ + Sbjct: 218 LLEHVREEGVTFGERLRALVDRFGDYLADTAGSGLYHTLDF------RSP-----QLARK 266 Query: 69980 VSAAALQRGLIARAMPHGDILGFAPPLITSRSEVDEIVKLAREAVD 70117 + Q GL+ A P G + P LI S E+ V+L E ++ Sbjct: 267 FEVSTRQHGLLT-APPVGSTVVVTPTLIASERELARGVELIAETLE 311 >ref|NP_720278.1|Int Length = 387 Score = 55.1 bits (131), Expect = 1e-05 Identities = 76/341 (22%), Positives = 137/341 (40%), Gaps = 12/341 (3%) Frame = +2 Query: 1240934 RKVFMLQYRTNAGERRKPAIGLYGELTVEQARSLAQTWLAEVRRGGDPGGDKAEARKAPT 1241113 R+ L + A R +G ++T E+A WL E DK+ R Sbjct: 32 RQATELHDKLKAEAWRVSKLGETPDMTFEEA---CVRWLEEKAHKKSLDDDKS--RIGFW 86 Query: 1241114 VKELCGRFMSDYSKVRNKPSTQKGYQGNIDRNIIPILGRMKVQDVKRPDVATMMKKLEST 1241293 ++ G + D ++ + + QK + N ++ ++ K+P V K + Sbjct: 87 LQHFAGMQLKDITETKIYSAIQKMTNRRHEENW-KLMDEACRKNGKQPPV--FKPKPAAL 143 Query: 1241294 PMEANHTLAVMRKMFNMAEIWGLRTDGTNPCRHIPQYPQGKTTRLITDEEMGKLFRHLDK 1241473 +A H L+ ++ + AE D P +PQ P+ K R + E +L Sbjct: 144 ATKATH-LSFIKALLRAAEREWKMLDKA-PIIKVPQ-PKNKRIRWLEPHEAKRLID---- 196 Query: 1241474 VEAESSEPPIVTLAIRLQFEFAARRSEILLLEWTWVDLENRRVAW---PDSKTG-GMSKP 1241641 E EP + + RRS I+ LEW +D++ R+VAW SK+ + Sbjct: 197 ---ECPEP--LKSVVEFALSTGLRRSNIINLEWQQIDMQ-RKVAWIHPEQSKSNQAIGVA 250 Query: 1241642 MSEEAHRLLST-VPRHEGSLYVLPS-------LRDPLKHMTNGEHYNGWSRILKAAGVQH 1241797 +++ A R+L + H ++V + P+ + W LK AG++ Sbjct: 251 LNDTACRVLKKQIGNHHKWVFVYKESSTKPDGTKSPVVRKMRYDANTAWRSALKRAGIED 310 Query: 1241798 VGTHGIRHRSATDIANSGIPVKVGMVLTAHKTVAMFMRYIH 1241920 H +RH A+ + +G+P+ V + +++ M RY H Sbjct: 311 FRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAH 351 >ref|NP_059584.1|Int Length = 387 Score = 55.1 bits (131), Expect = 1e-05 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 12/192 (6%) Frame = +2 Query: 1241381 PCRHIPQYPQGKTTRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRLQFEFAARRSEIL 1241560 P +PQ P+ K R + E +L E EP + + RRS I+ Sbjct: 171 PIIKVPQ-PKNKRIRWLEPHEAKRLID-------ECQEP--LKSVVEFALSTGLRRSNII 220 Query: 1241561 LLEWTWVDLENRRVAW---PDSKTG-GMSKPMSEEAHRLLST-VPRHEGSLYVLPS---- 1241713 LEW +D++ R+VAW SK+ + +++ A R+L + H ++V Sbjct: 221 NLEWQQIDMQ-RKVAWIHPEQSKSNHAIGVALNDTACRVLKKQIGNHHKWVFVYKESSTK 279 Query: 1241714 ---LRDPLKHMTNGEHYNGWSRILKAAGVQHVGTHGIRHRSATDIANSGIPVKVGMVLTA 1241884 + P+ + W LK AG++ H +RH A+ + +G+P+ V + Sbjct: 280 PDGTKSPVVRKMRYDANTAWRAALKRAGIEDFRFHDLRHTWASWLVQAGVPISVLQEMGG 339 Query: 1241885 HKTVAMFMRYIH 1241920 +++ M RY H Sbjct: 340 WESIEMVRRYAH 351 >ref|NP_042041.1|transcriptional regulator Length = 88 Score = 55.1 bits (131), Expect = 1e-05 Identities = 26/59 (44%), Positives = 36/59 (61%) Frame = +1 Query: 436900 RLIRLREVRTRVGLGASTVYRYLAAGKFPRPVEIGGGRVAWVESEIDAWIASRREVVGR 437076 R +R+ EV GL ST+Y + G+FP V +GG VAW+ SE+ AW+A R + GR Sbjct: 26 RFLRVPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAWMAGR--IAGR 82 Score = 50.4 bits (119), Expect = 4e-04 Identities = 25/59 (42%), Positives = 35/59 (59%) Frame = +3 Query: 462732 MSIEDSGTDRILRRREVEARTGLSRSTIYRRMQAGTFPPAIPLGGRLVGWRARDIDAFL 462908 M + D +R LR EV GLSRSTIY ++ G FPP + LGG+ V W ++ A++ Sbjct: 17 MPLPDITQERFLRVPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAWM 75 >ref|NP_040813.1|integrase Length = 289 Score = 55.1 bits (131), Expect = 1e-05 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 4/162 (2%) Frame = -1 Query: 853050 RRLIEAAGNLKHQTALSVAYGAGLRASEVVALKVTDIDSQRMTLRIEQGKGRRDRYAMLS 852871 + L + ++ +++ + + +GLR SE + +K++D+D + +R+ K R+ RYA S Sbjct: 120 KNLNSSKNSITYKSFIRLLLDSGLRVSEALNIKISDMDFKNKVIRVLSSKTRKQRYAPFS 179 Query: 852870 PVLLERLRVWWHVARAQGRMPDGGWLFPGLDPVDPLSTRQLNRXXXXXXXXAQID----K 852703 L+ ++ V P +LF + RQ N+ + Sbjct: 180 SFSLKYIKELIEV------NPKRDYLFYNF-----IKDRQTNKNDIKLFYKRLKKHLNLE 228 Query: 852702 RVSMHTLRHSFATHLLEQKVDIRVIQVLLGHAKLENTALYVQ 852577 R+ H R +FA+ L+E ++I +Q + H+++E T YVQ Sbjct: 229 RIHTHRFRKTFASILIENGLNIDDLQKIFDHSRIETTIKYVQ 270 >ref|NP_945064.1|gp33 Length = 366 Score = 54.3 bits (129), Expect = 3e-05 Identities = 69/267 (25%), Positives = 104/267 (38%), Gaps = 30/267 (11%) Frame = +2 Query: 1241228 RMKVQDVKRPDVATMMKKLESTPMEANHTLAVMRKMFNMAEIWGLRTD--GTNPCRHIPQ 1241401 ++ V DVK V +K + + H VMR + W + TNPCR + Sbjct: 96 KVNVADVKPTHVHNWLKVKYAGKL---HMQRVMRAFLSGFFQWCVDKGKRDTNPCREVKL 152 Query: 1241402 YPQGKTTRLITD-----------EEMGKLFRHLD---KVEAESSEPPIVTLAIRLQFEFA 1241539 ITD E KL D +V A+ P++ I L + A Sbjct: 153 KKPKPRQTYITDAHFSAIRNAMLETTYKLNSGTDSEKEVVADVPTGPMMQCIIDLCYLTA 212 Query: 1241540 ARRSEILLLEWTWVDLENRRVAWPDSKTGGMSK-----PMSEEAHRLLSTVPRHEGSLYV 1241704 R +EI L+W+ VD E + + SKT S ++ E + +L + + +G Sbjct: 213 QRSTEIRTLKWSDVDREAGVIHFVPSKTADSSGVRVDFKITPEINEVLLRIQQIDGR--- 269 Query: 1241705 LPSLRD-PLKHMTNGEHY------NGWSRILKAAGVQHVG--THGIRHRSATDIANSGIP 1241857 P++ D P+ H G+ Y W K A + H G IR ++ TD +G Sbjct: 270 -PTIGDMPVVHTRKGKMYAANTILKAWKTAAKRANLSHFGYTVKDIRAKALTDGERAGYD 328 Query: 1241858 VKVGMVLTAHKTVAMFMRYIHTEDAPV 1241938 VK + AH M YI + PV Sbjct: 329 VKALQIAAAHTDEKMTETYIKKRNVPV 355 >ref|NP_061531.1|integrase Length = 369 Score = 53.9 bits (128), Expect = 3e-05 Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 15/181 (8%) Frame = +2 Query: 1241498 PIVTLAIRLQFEFAARRSEILLLEWTWVDLENRRVAWPDSKTGGMSKPMSEEAHRLLSTV 1241677 P++ IRL RR E+L LEW VD NR + S T + ++ Sbjct: 182 PMLEDFIRLAVNTGCRREEMLGLEWRRVDFANRLIYLEASHTKAGKR----------RSI 231 Query: 1241678 PRHEGSLYVLPSLRDPLKHMT-----------NGEHY----NGWSRILKAAGVQHVGTHG 1241812 P +EG++ L R + T NG+ G+ + +AA + H Sbjct: 232 PINEGAMAALKR-RMAFRSETSPECPWVFARANGDRVISLSAGFKQACQAAKIADFTIHD 290 Query: 1241813 IRHRSATDIANSGIPVKVGMVLTAHKTVAMFMRYIHTEDAPVRQAAELVANRRKTVVAGT 1241992 +RH A + ++G+P+ L H TVAM RY H A VR A ++ R+ ++ + Sbjct: 291 LRHTCAAWLVSAGVPLADVRDLLGHSTVAMTERYAHLAPARVRDAVGVLDQVREGRISRS 350 Query: 1241993 I 1241995 + Sbjct: 351 V 351 >ref|NP_050999.1|P38 Length = 390 Score = 53.9 bits (128), Expect = 3e-05 Identities = 82/362 (22%), Positives = 149/362 (41%), Gaps = 34/362 (9%) Frame = +2 Query: 1240937 KVFMLQYRTNAGERRKPAIGLYGELTVEQARSLAQTWLAEVRRGGDPGG----------- 1241083 K++ Y T G+R K ++G + ++ + L + + D Sbjct: 8 KIWYGSYTTPCGKRIKESLGTEDKKQAQELHDKRRAELWRIAKLDDFPNVTFDEACLRWI 67 Query: 1241084 -DKAEARKAPTVKELCGRFMSDYSKVRNKPSTQKGYQGNIDR---NIIPILGRMKVQDVK 1241251 +KA + K G ++ +S R K T+ I + + + +V K Sbjct: 68 EEKANKKSLDDDKGRLGFWLLYFSGTRLKDMTEAKIYSAISKMKNRQEQLRWKSRVNSAK 127 Query: 1241252 RP--DVATMMKKLESTPMEANHTLAVMRKMFNMAEI-WGLRTDGTNPCRHIPQYPQGKTT 1241422 R ++ K S +A H LA+++ M AE W + +P +P + + Sbjct: 128 RKGIEIPAYQAKEVSIATKAKH-LALLKSMMKSAERDW--KWIEKSPVIKVPSAREKRIR 184 Query: 1241423 RLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRLQFEFAA----RRSEILLLEWTWVDLE 1241590 L DE +++ E EP +R EFA RRS I+ L W+ +D++ Sbjct: 185 WLEPDEA--------ERLINECPEP------LRSTVEFALATGLRRSNIINLAWSQIDMQ 230 Query: 1241591 NRRVAW---PDSKTG-GMSKPMSEEAHRLLST-VPRHEGSLYV-LPSLRDPLKHMTNG-- 1241746 R+VAW +SK+G + +++ A +L+ + H+ ++V S + TN Sbjct: 231 -RKVAWIEPENSKSGKAIGVALNDTACCILTRQLGNHQKWVFVHTMSAKRSDGSQTNSIR 289 Query: 1241747 ----EHYNGWSRILKAAGVQHVGTHGIRHRSATDIANSGIPVKVGMVLTAHKTVAMFMRY 1241914 + W LK AG+++ H +RH A+ + SG+P+ V + ++V M RY Sbjct: 290 KMRVDSNTAWRAALKRAGIENFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESVEMVRRY 349 Query: 1241915 IH 1241920 H Sbjct: 350 AH 351 >ref|NP_700401.1|Integrase protein Length = 329 Score = 53.5 bits (127), Expect = 4e-05 Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 10/261 (3%) Frame = +2 Query: 1241036 AQTWLAEVRRGGDPGGDKAEARKAP-TVKELCGRFMSDYSKVRNKPSTQKGYQGNIDRNI 1241212 A+ W+A + K E RK T +L +F++ P TQK Y + ++ I Sbjct: 42 AEVWVAYEK--------KVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAH-EKYI 92 Query: 1241213 IPILGRMKVQDVKRPDVATMMK-KLESTPMEANHTLAVMRKMFNMAEIWGLRTDGTNPCR 1241389 + + G + + +K + M + + + ++ANH + M ++F + G NPC Sbjct: 93 LAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPG--NPCV 150 Query: 1241390 HIPQYPQGKTTRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRLQFEFAARRSEILLLE 1241569 + ++P+ + R ITDEE ++ ++ P V A+ + + AAR S++L + Sbjct: 151 GVDKFPKPQRDRYITDEEYRAIY---------NNATPAVRAAMEIAYLCAARVSDVLKMN 201 Query: 1241570 WTWVDLENRRVAWPDSKTGGMSKPMSEEAHRLLSTVP--RHEGSLYVLPSLRDPLKHMTN 1241743 W + + + KTG K + RL V R G P+ Sbjct: 202 WN--QILEKGIFIQQGKTG--VKQIKSWTDRLRDAVEICREWGE-------EGPVIRTMY 250 Query: 1241744 GEHYN------GWSRILKAAG 1241788 GE Y+ W + KAAG Sbjct: 251 GERYSYKGFNEAWRKARKAAG 271 >ref|YP_006360.1|Int Length = 387 Score = 53.1 bits (126), Expect = 6e-05 Identities = 74/341 (21%), Positives = 137/341 (40%), Gaps = 12/341 (3%) Frame = +2 Query: 1240934 RKVFMLQYRTNAGERRKPAIGLYGELTVEQARSLAQTWLAEVRRGGDPGGDKAEARKAPT 1241113 R+ L + A R +G ++T E+A WL E DK+ R Sbjct: 32 RQATELHDKLKAEAWRVNKLGETPDMTFEEA---CVRWLEEKAHKKSLDDDKS--RIGFW 86 Query: 1241114 VKELCGRFMSDYSKVRNKPSTQKGYQGNIDRNIIPILGRMKVQDVKRPDVATMMKKLEST 1241293 ++ G + D ++ + + QK + N ++ ++ K+P V K + Sbjct: 87 LQHFAGMQLKDITETKIYSAIQKMTNRRHEENW-KLMDEACRKNGKQPPV--FKPKPAAV 143 Query: 1241294 PMEANHTLAVMRKMFNMAEIWGLRTDGTNPCRHIPQYPQGKTTRLITDEEMGKLFRHLDK 1241473 +A H L+ ++ + AE D P +PQ P+ K R + E +L Sbjct: 144 ATKATH-LSFIKALLRAAEREWKMLDKA-PIIKVPQ-PKNKRIRWLEPHEAKRLID---- 196 Query: 1241474 VEAESSEPPIVTLAIRLQFEFAARRSEILLLEWTWVDLENRRVAW---PDSKTG-GMSKP 1241641 E EP + + RRS I+ ++W +D++ R+VAW SK+ + Sbjct: 197 ---ECPEP--LKSVVEFALSTGLRRSNIINMDWQQIDMQ-RKVAWIHPEQSKSNQAIGVA 250 Query: 1241642 MSEEAHRLLST-VPRHEGSLYVLPS-------LRDPLKHMTNGEHYNGWSRILKAAGVQH 1241797 +++ A R+L + H ++V + P+ + W LK AG++ Sbjct: 251 LNDTACRVLKKQIGNHHKWVFVYKESSTKPDGTKSPVVRKMRYDANTAWRSALKRAGIED 310 Query: 1241798 VGTHGIRHRSATDIANSGIPVKVGMVLTAHKTVAMFMRYIH 1241920 H +RH A+ + +G+P+ V + +++ M RY H Sbjct: 311 FRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAH 351 >ref|NP_599058.1|integrase Length = 387 Score = 52.4 bits (124), Expect = 1e-04 Identities = 76/343 (22%), Positives = 135/343 (39%), Gaps = 14/343 (4%) Frame = +2 Query: 1240934 RKVFMLQYRTNAGERRKPAIGLYGELTVEQARSLAQTWLAEVRRGGDPGGDKAEARKAPT 1241113 R+ L + A R +G ++T E+A WL E DK+ R Sbjct: 32 RQATELHDKLKAEAWRVSKLGEIPDITFEEA---CVRWLEEKAHQKSLDDDKS--RIGFW 86 Query: 1241114 VKELCGRFMSDYSKVRNKPSTQKGYQGNIDRNIIPILGRMKVQDVKRPD--VATMMKKLE 1241287 ++ G + D ++ + + QK + N R++ + ++ V K Sbjct: 87 LQHFAGMQLRDITESKIYSAIQKMTNRRHEEN-----WRLRAEACRKKGKPVPEYTPKPA 141 Query: 1241288 STPMEANHTLAVMRKMFNMAEIWGLRTDGTNPCRHIPQYPQGKTTRLITDEEMGKLFRHL 1241467 S +A H L+ ++ + AE D P +PQ P+ K R + E +L Sbjct: 142 SVATKATH-LSFIKALLRAAEREWKMLDKA-PIIKVPQ-PKNKRIRWLEPHEAQRLID-- 196 Query: 1241468 DKVEAESSEPPIVTLAIRLQFEFAARRSEILLLEWTWVDLENRRVAW---PDSKTG-GMS 1241635 E EP + + RRS I+ LEW +D++ RRVAW +SK+ + Sbjct: 197 -----ECPEP--LKSVVEFALATGLRRSNIINLEWQQIDMQ-RRVAWINPEESKSNRAIG 248 Query: 1241636 KPMSEEAHRLLST-VPRHEGSLYVLPS-------LRDPLKHMTNGEHYNGWSRILKAAGV 1241791 +++ A R+L + H ++V + P + W L+ AG+ Sbjct: 249 VALNDTACRVLKKQIGNHHRWVFVYKESCTKPDGTKAPTVREMRYDANTAWKAALRRAGI 308 Query: 1241792 QHVGTHGIRHRSATDIANSGIPVKVGMVLTAHKTVAMFMRYIH 1241920 H +RH A+ + +G+P+ V + +++ M RY H Sbjct: 309 DDFRFHDLRHTWASWLGQAGVPLSVLQEMGGWESIEMVRRYAH 351 >ref|NP_536390.1|putative site-specific integrase Length = 366 Score = 50.8 bits (120), Expect = 3e-04 Identities = 66/267 (24%), Positives = 104/267 (38%), Gaps = 30/267 (11%) Frame = +2 Query: 1241228 RMKVQDVKRPDVATMMKKLESTPMEANHTLAVMRKMFNMAEIWGLRTD--GTNPCRHIPQ 1241401 ++ V DVK + +K + + H VMR + W + TNPC+ + Sbjct: 96 KVNVADVKPTHINNWLKVKYAGKL---HMQRVMRAFLSGFFQWCVDKGKRDTNPCKEVKL 152 Query: 1241402 YPQGKTTRLITD-----------EEMGKLFRHLDK---VEAESSEPPIVTLAIRLQFEFA 1241539 ITD E KL D+ V A+ P++ + L + A Sbjct: 153 KKPKSRQTYITDTHFAAIRSAMLETTYKLHEGTDRERDVVADVPTGPMMQCIVDLCYLTA 212 Query: 1241540 ARRSEILLLEWTWVDLENRRVAWPDSKTGGMSK-----PMSEEAHRLLSTVPRHEGSLYV 1241704 R +EI L+W+ VD E + + SKT S ++ E + +L + + +G Sbjct: 213 QRSTEIRNLKWSDVDREAGVIHFIPSKTVDSSGVRVDFKITPEINEVLLRIRQIDGR--- 269 Query: 1241705 LPSLRD-PLKHMTNGEHY------NGWSRILKAAGVQHVG--THGIRHRSATDIANSGIP 1241857 P++ D P+ H G+ Y W K A + H G IR ++ TD +G Sbjct: 270 -PTIGDMPVVHTRKGKTYAANTILKAWKAAAKRANLLHFGYTVKDIRAKALTDGERAGYD 328 Query: 1241858 VKVGMVLTAHKTVAMFMRYIHTEDAPV 1241938 VK + AH M YI + PV Sbjct: 329 VKALQIAAAHTDEKMTETYIKKRNVPV 355 >ref|NP_075464.1|integrase Length = 401 Score = 50.4 bits (119), Expect = 4e-04 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 26/187 (13%) Frame = -1 Query: 853005 LSVAYGAGLRASEVVALKVTDIDSQRMTLRI---------EQGKGRRDRYAMLSP----- 852868 L V G+R E+ AL+ DID T+ I E+G G +D +S Sbjct: 220 LEVQALTGMRIGELQALQEKDIDLLNKTINITGTIHRIKYEEGFGYKDTTKTISSKRSIS 279 Query: 852867 -----------VLLERLRVWWHVARAQGRMPDGGWLFPGLDPVDPLSTRQLNRXXXXXXX 852721 ++LE + R D G++F +PL Q+ Sbjct: 280 INSRTVEIFKKIILENKML----KRWNSSYVDRGFIFT-TKKGNPLCNNQIAGVLKKTTK 334 Query: 852720 XAQIDKRVSMHTLRHSFATHLLEQKVDIRVIQVLLGHAKLENT-ALYVQVATDLLHEVTS 852544 ++K+V+ HT RH+ T L+E V ++ I +GH + T +Y V + E+T Sbjct: 335 ALNMNKKVTTHTFRHTHITLLVEMNVSLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQ 394 Query: 852543 PLDRLPS 852523 L+ +PS Sbjct: 395 KLENIPS 401 >ref|NP_058467.1|integrase Length = 401 Score = 50.4 bits (119), Expect = 4e-04 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 26/187 (13%) Frame = -1 Query: 853005 LSVAYGAGLRASEVVALKVTDIDSQRMTLRI---------EQGKGRRDRYAMLSP----- 852868 L V G+R E+ AL+ DID T+ I E+G G +D +S Sbjct: 220 LEVQALTGMRIGELQALQEKDIDLLNKTINITGTIHRIKYEEGFGYKDTTKTISSKRSIS 279 Query: 852867 -----------VLLERLRVWWHVARAQGRMPDGGWLFPGLDPVDPLSTRQLNRXXXXXXX 852721 ++LE + R D G++F +PL Q+ Sbjct: 280 INSRTVEIFKKIILENKML----KRWNSSYVDRGFIFT-TKKGNPLCNNQIAGVLKKTTK 334 Query: 852720 XAQIDKRVSMHTLRHSFATHLLEQKVDIRVIQVLLGHAKLENT-ALYVQVATDLLHEVTS 852544 ++K+V+ HT RH+ T L+E V ++ I +GH + T +Y V + E+T Sbjct: 335 ALNMNKKVTTHTFRHTHITLLVEMNVSLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQ 394 Query: 852543 PLDRLPS 852523 L+ +PS Sbjct: 395 KLENIPS 401 >ref|NP_958623.1|77ORF007 Length = 401 Score = 50.4 bits (119), Expect = 4e-04 Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 28/204 (13%) Frame = -1 Query: 853056 EVRRLIEAAGNLKHQTALSVAYGA------GLRASEVVALKVTDIDSQRMTLRIE----- 852910 ++R I N++++ + VA G+R E++AL+V D+D + T+ I Sbjct: 197 QIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKDVDLKNKTIAINGTIHR 256 Query: 852909 -------------QGKGRRDRYAMLSPVLLERLRVWWHVARAQGRMP---DGGWLFPGLD 852778 + G R + A+ S + ++ + Q P D G++F Sbjct: 257 IKCNAGFGHKDTTKTAGSRRKIAINSRIANVLKKIMLENKKMQQWEPSYVDRGFIFTTCQ 316 Query: 852777 PVDPLSTRQLNRXXXXXXXXAQIDKRVSMHTLRHSFATHLLEQKVDIRVIQVLLGHAKLE 852598 +P+ ++N+ I+K+V+ HTLRH+ + L E + ++ I +GH + Sbjct: 317 G-NPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHTDEK 375 Query: 852597 NT-ALYVQVATDLLHEVTSPLDRL 852529 T +Y V + E+ L++L Sbjct: 376 TTIKVYTHVTEKMDRELEQKLEKL 399 >ref|NP_803307.1|integrase Length = 401 Score = 50.1 bits (118), Expect = 5e-04 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 26/187 (13%) Frame = -1 Query: 853005 LSVAYGAGLRASEVVALKVTDIDSQRMTLRI---------EQGKGRRDRYAMLSP----- 852868 L V G+R E+ AL+ DID T+ I E+G G +D +S Sbjct: 220 LEVQALTGMRIGELQALQEKDIDLLNKTINITGTIHRIKYEKGFGYKDTTKTISSKRSIS 279 Query: 852867 -----------VLLERLRVWWHVARAQGRMPDGGWLFPGLDPVDPLSTRQLNRXXXXXXX 852721 ++LE + R D G++F +PL Q+ Sbjct: 280 INSRTVEIFKKIILENKML----KRWNSSYVDRGFIFT-TKKGNPLCNNQIAGVLKKTTK 334 Query: 852720 XAQIDKRVSMHTLRHSFATHLLEQKVDIRVIQVLLGHAKLENT-ALYVQVATDLLHEVTS 852544 ++K+V+ HT RH+ T L+E V ++ I +GH + T +Y V + E+T Sbjct: 335 ALNMNKKVTTHTFRHTHITLLVEMNVSLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQ 394 Query: 852543 PLDRLPS 852523 L+ +PS Sbjct: 395 KLENIPS 401 >ref|NP_620626.1|putative transposase Length = 362 Score = 48.1 bits (113), Expect = 0.002 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 17/138 (12%) Frame = -2 Query: 824288 EKGQGRFKEYDLGYVHIDVKH-LPKLRTADGEVRKRYLYVAIDRCSRFVHLAVYDAENTT 824112 +K R++ ++G + +D K+ +P + D +K Y+Y ID +R VYD +T Sbjct: 173 KKQHSRYEVKEIGLLQMDAKYFVPSKFSVD---KKYYVYDFIDEKTRLALGYVYDKLSTD 229 Query: 824111 NAIAFLAQA----RKAFPFRITHVLTDRGSCFTAD------------DFERACAKLKVTR 823980 NAI + +A + F IT + TD GS F + +F + + Sbjct: 230 NAIDAVKKAISDFKNIFGIIITRIRTDNGSEFINNYRNNQKISVKKTNFTQFLTDKNILH 289 Query: 823979 RVTKPYTPQTNGMVERFN 823926 + T +PQ+NG +ERF+ Sbjct: 290 QTTPVRSPQSNGKIERFH 307 Score = 48.1 bits (113), Expect = 0.002 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 17/138 (12%) Frame = +1 Query: 719029 EKGQGRFKEYDLGYVHIDVKH-LPKLRTADGEVRKRYLYVAIDRCSRFVHLAVYDAENTT 719205 +K R++ ++G + +D K+ +P + D +K Y+Y ID +R VYD +T Sbjct: 173 KKQHSRYEVKEIGLLQMDAKYFVPSKFSVD---KKYYVYDFIDEKTRLALGYVYDKLSTD 229 Query: 719206 NAIAFLAQA----RKAFPFRITHVLTDRGSCFTAD------------DFERACAKLKVTR 719337 NAI + +A + F IT + TD GS F + +F + + Sbjct: 230 NAIDAVKKAISDFKNIFGIIITRIRTDNGSEFINNYRNNQKISVKKTNFTQFLTDKNILH 289 Query: 719338 RVTKPYTPQTNGMVERFN 719391 + T +PQ+NG +ERF+ Sbjct: 290 QTTPVRSPQSNGKIERFH 307 Score = 48.1 bits (113), Expect = 0.002 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 17/138 (12%) Frame = -3 Query: 28195 EKGQGRFKEYDLGYVHIDVKH-LPKLRTADGEVRKRYLYVAIDRCSRFVHLAVYDAENTT 28019 +K R++ ++G + +D K+ +P + D +K Y+Y ID +R VYD +T Sbjct: 173 KKQHSRYEVKEIGLLQMDAKYFVPSKFSVD---KKYYVYDFIDEKTRLALGYVYDKLSTD 229 Query: 28018 NAIAFLAQA----RKAFPFRITHVLTDRGSCFTAD------------DFERACAKLKVTR 27887 NAI + +A + F IT + TD GS F + +F + + Sbjct: 230 NAIDAVKKAISDFKNIFGIIITRIRTDNGSEFINNYRNNQKISVKKTNFTQFLTDKNILH 289 Query: 27886 RVTKPYTPQTNGMVERFN 27833 + T +PQ+NG +ERF+ Sbjct: 290 QTTPVRSPQSNGKIERFH 307 >ref|NP_919008.1|conserved hypothetical protein Length = 719 Score = 48.1 bits (113), Expect = 0.002 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Frame = +2 Query: 479594 LAMIP-AEDYATWVDMAFALKQGFG--EAGFDIWDEWSRTAHNYSERAARVTWRS 479749 L ++P A+DY TWV++ AL + E G ++W EWS TA NY + W+S Sbjct: 252 LLLVPDADDYETWVNVGMALFHQYDGHERGLELWHEWSETADNYDAKELDAKWKS 306 >ref|YP_024685.1|gp12 Length = 100 Score = 47.8 bits (112), Expect = 0.002 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Frame = -1 Query: 1080447 LATGQTLRSAERMLDVLKVFSTD-EPALTVSEITGRLGLAPSTVRRILDALESKGFVRLD 1080271 + T +SAE++L+VL V LT E+T L+PS + R + LE+ GF Sbjct: 1 MTANATTKSAEKVLEVLNVLLGHFAHGLTPGELTKATNLSPSNITRYVATLEAMGFAERI 60 Query: 1080270 TRTGKYSPFVEIVRLAAAAVQGNDLISGASQPLDDLRDR 1080154 TG+ P V++ R A A ++ D A + LD ++ R Sbjct: 61 PETGRIRPSVKLGRHAVAILRSLD---AARERLDSIQTR 96 Score = 40.0 bits (92), Expect = 0.49 Identities = 26/80 (32%), Positives = 43/80 (53%) Frame = +2 Query: 378500 KSALRVLEIMEFVATHKAGCATHTEISQALGIPKSSLTALLTDLQRPGYLELDRETGRYA 378679 KSA +VLE++ + H A T E+++A + S++T + L+ G+ E ETGR Sbjct: 8 KSAEKVLEVLNVLLGHFAHGLTPGELTKATNLSPSNITRYVATLEAMGFAERIPETGRIR 67 Query: 378680 IGSQVMFLAHAYLRNLNIVR 378739 ++ A A LR+L+ R Sbjct: 68 PSVKLGRHAVAILRSLDAAR 87 >ref|NP_958698.1|Bbp29 Length = 854 Score = 47.8 bits (112), Expect = 0.002 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 8/96 (8%) Frame = +2 Query: 479594 LAMIPAEDYATWVDMAFALKQGFGEAG--FDIWDEWSRTAHNY--SERAARVTWRSAGES 479761 +A + EDY TW+ + +L F +G +WDEWS TA NY SE AR W S G+S Sbjct: 231 VAYVDNEDYDTWLKVGMSLHHEFDGSGEALALWDEWSATASNYASSEDVAR-RWDSFGKS 289 Query: 479762 GGK--TLASLFWLAQQHGFD-VRG-SRAAMDPAERL 479857 G T L + Q D VR R A+D A+ L Sbjct: 290 GRNPTTARWLLKIGNQGKRDAVRAEKRTALDDAKAL 325 >ref|NP_996591.1|primase Length = 854 Score = 47.8 bits (112), Expect = 0.002 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 8/96 (8%) Frame = +2 Query: 479594 LAMIPAEDYATWVDMAFALKQGFGEAG--FDIWDEWSRTAHNY--SERAARVTWRSAGES 479761 +A + EDY TW+ + +L F +G +WDEWS TA NY SE AR W S G+S Sbjct: 231 VAYVDNEDYDTWLKVGMSLHHEFDGSGEALALWDEWSATASNYASSEDVAR-RWDSFGKS 289 Query: 479762 GGK--TLASLFWLAQQHGFD-VRG-SRAAMDPAERL 479857 G T L + Q D VR R A+D A+ L Sbjct: 290 GRNPTTARWLLKIGNQGKRDAVRAEKRTALDDAKAL 325 >ref|NP_996639.1|primase Length = 854 Score = 47.8 bits (112), Expect = 0.002 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 8/96 (8%) Frame = +2 Query: 479594 LAMIPAEDYATWVDMAFALKQGFGEAG--FDIWDEWSRTAHNY--SERAARVTWRSAGES 479761 +A + EDY TW+ + +L F +G +WDEWS TA NY SE AR W S G+S Sbjct: 231 VAYVDNEDYDTWLKVGMSLHHEFDGSGEALALWDEWSATASNYASSEDVAR-RWDSFGKS 289 Query: 479762 GGK--TLASLFWLAQQHGFD-VRG-SRAAMDPAERL 479857 G T L + Q D VR R A+D A+ L Sbjct: 290 GRNPTTARWLLKIGNQGKRDAVRAEKRTALDDAKAL 325 >ref|YP_077258.1|Nucleoside-diphosphate-sugar epimerase Length = 320 Score = 47.4 bits (111), Expect = 0.003 Identities = 61/264 (23%), Positives = 102/264 (38%), Gaps = 6/264 (2%) Frame = -3 Query: 1129009 LITGVTGQDGSYLAELLLSKGYEVHGIKRRSSLFNTERIDHLYQEPHASDRRFVLHHGDL 1128830 LITG TG GS L + L + DH S +V DL Sbjct: 3 LITGCTGFIGSQLLKRL-----------NNDKVVCVANKDHFSNNIVDSAAEYVFV--DL 49 Query: 1128829 TDSTSLVRIIQRAQPDEIYNLGAQSHVAVSFEEPEYTANVDGVGALRILEAIRILGLEKK 1128650 TD + ++++ +PD + NL +++ V +S+E+ + N + + EA I Sbjct: 50 TDREKVRDLLRKVKPDLVINLASKTPVRLSYEDTSFMNNAIIAYNIAMAEAPLI------ 103 Query: 1128649 TRFYQASTSELYGLV--QEIPQKETTPFYPRSPYAVAKLYAYWITVNYRE----AYGIYA 1128488 AST+E+Y ++E P SPYAV+K+ + + +E I Sbjct: 104 ----HASTAEVYPYTPYPHYYKEEEVYRTPTSPYAVSKIASEMLLAGRKEKTIILRPINT 159 Query: 1128487 CNGILFNHESPVRGETFVTRKITRAISRIATGLQECLYLGNMSALRDWGHARDYVEMQWL 1128308 + RG F + + + +G +E Y G+ + R W + D+V Sbjct: 160 IGRPISRLPEEARGYFF-----EKTVLAMLSGAKEIHYDGHPLSSRQWMYWEDHVNAYLH 214 Query: 1128307 MLQQEQPEDFVIATGVQYSVRQFV 1128236 ++ + V V YSV V Sbjct: 215 AIKNLDKMEGVYNVSVHYSVYNHV 238 >ref|NP_536628.1|Int Length = 345 Score = 47.0 bits (110), Expect = 0.004 Identities = 20/44 (45%), Positives = 28/44 (63%) Frame = -1 Query: 852690 HTLRHSFATHLLEQKVDIRVIQVLLGHAKLENTALYVQVATDLL 852559 H LRH+FATH + + DI ++Q +LGH K+E T Y + D L Sbjct: 291 HVLRHTFATHFMMNRGDILILQRILGHQKIEQTMAYAHFSPDHL 334 >ref|NP_076780.1|integrase Length = 399 Score = 45.4 bits (106), Expect = 0.012 Identities = 79/398 (19%), Positives = 151/398 (37%), Gaps = 58/398 (14%) Frame = +2 Query: 1240937 KVFMLQYRTNAGERRKPAIGLY-------GELTVEQARSLAQTW----LAEVRRGGDPGG 1241083 K+ + +Y+T AGE R G Y G+ R +T L ++ G Sbjct: 3 KLNIKEYKTKAGEVRYILRGAYIGTDVLTGKQIKTDIRGRTKTGVKNELERLKNNFKKNG 62 Query: 1241084 DKAEARKAPTVKELCGRFMSDYSKVRNKPSTQKGYQGNIDRNIIPILGRMKVQDVKRPDV 1241263 + T +E+ F Y K++ K + + N+D +P G ++ + + Sbjct: 63 NTKGKESLETFEEVAESFFELY-KLQRKIGSIDQMRSNLDNYTLPAFGNKRISKITTAQI 121 Query: 1241264 ATMM-------------KKLESTPMEANHTLA--VMRKMFNMAEIWGLRTDGTNPCRHI- 1241395 + ++ +T + L ++ ++F A G+ + NPC+ + Sbjct: 122 QQQVIKWGKSAAAPLNGRQKRTTGQAKRYKLQFNIINRIFQHALSLGIIEN--NPCQSVI 179 Query: 1241396 -PQYP---QGKTTRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRLQFEFAARRSEILL 1241563 PQ K + E+ KLF +L+ +++ +RL R E + Sbjct: 180 VPQVKVEQAKKEIKFYKKSELAKLFNYLESLKSGQWSNEYFKALLRLLVASGLRIGEAMA 239 Query: 1241564 LEWTWVDLENRRVAWPDSKTGG-----MSKPMSEEAHRLLSTVPRHEGSLYVLPS----- 1241713 L W+ ++ +N+ V+ SKT P S +++R++S + ++YVL S Sbjct: 240 LSWSDINFQNQTVS--VSKTTVRRFQIQDTPKSNKSNRIISI---DDKAIYVLKSWYFFQ 294 Query: 1241714 ------LRDPLKHMTNGEHYNG----------WSRILKAAGVQHVGTHGIRHRSATDIAN 1241845 L +P +++ + G + I+K A + + HG R A+ N Sbjct: 295 KKHFMKLGNPQQNLVFPKIEGGVMDYHNLIYKLNNIIKNAELPLLSFHGFRRSHASLCLN 354 Query: 1241846 SGIPVKVGMVLTAHKTVAMFM-RYIHTEDAPVRQAAEL 1241956 + + KV H + + M Y H E + EL Sbjct: 355 AEMSYKVIQERLGHSKLQLTMDLYSHLEPEKKNKELEL 392 >ref|NP_046574.1|unknown Length = 422 Score = 45.1 bits (105), Expect = 0.015 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 6/106 (5%) Frame = -1 Query: 1120764 ILTKNEEKDLPGCLESVIEWCDDIHVYDSHSTDRTVELATLLGAKITLREFDNWASHQNW 1120585 I+ NE K + CL SV + ++I V DS+STD TV++ + ++ ++ W + ++ Sbjct: 60 IIVYNESKRIKKCLNSVKDDFNEIIVLDSYSTDDTVDIIKCDFPDVEIK-YEKWKNDFSY 118 Query: 1120584 GLANI--KFRHDWVLYIDADERVTED----LARSVREMVSTSTDCV 1120465 I +W+ +IDAD +++ +A+ R + S DCV Sbjct: 119 ARNKIIEYATSEWIYFIDADNLYSKENKGKIAKVARVLEFFSIDCV 164 >ref|NP_958230.1|gene 56 protein Length = 100 Score = 44.7 bits (104), Expect = 0.020 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%) Frame = +3 Query: 767868 YTAEFKEAAVQRVKEGQGL---SAVSRELGMSTQTLRNWLKA---SEAGKLNGPGAKVVT 768029 ++AEFK + Q V + + +A + ++G+ST T W+K GK P A +T Sbjct: 6 FSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMT--RWVKQLRDERQGKT--PKASPIT 61 Query: 768030 AEQMELSRLRAENKRLQMELEIAKKAAVGSMS 768125 EQ+E+ LR + +R++ME EI KKA MS Sbjct: 62 PEQIEIRELRKKLQRIEMENEILKKATALLMS 93 >ref|NP_046786.1|Int Length = 337 Score = 44.7 bits (104), Expect = 0.020 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -1 Query: 852690 HTLRHSFATHLLEQKVDIRVIQVLLGHAKLENTALYVQVATDLLHEVTS 852544 H LRHSFATH + I +Q +LGH ++E T +Y A + L + S Sbjct: 269 HALRHSFATHFMINGGSIITLQRILGHTRIEQTMVYAHFAPEYLQDAIS 317 >ref|NP_690787.1|immunity repressor Length = 144 Score = 44.7 bits (104), Expect = 0.020 Identities = 21/69 (30%), Positives = 39/69 (56%) Frame = -2 Query: 924668 MGERVRLLRARRGMTRKTLATETGLSERHLANLESGVGNASVLVLRQIASTLNCPLAEVI 924489 +G+R++ +R R +T+ LA + LS +LA++E N S+ L +A L ++ ++ Sbjct: 3 VGQRIKAIRKERKLTQVQLAEKANLSRSYLADIERDRYNPSLSTLEAVAGALGIQVSAIV 62 Query: 924488 GDETTASAE 924462 G+ET E Sbjct: 63 GEETLIKEE 71 Score = 43.9 bits (102), Expect = 0.034 Identities = 21/68 (30%), Positives = 44/68 (64%) Frame = +3 Query: 798618 VGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTALL 798797 VG R++A+R + L+ +LA +A +S ++ +ER++ NPS+ LE + AL + ++A++ Sbjct: 3 VGQRIKAIRKERKLTQVQLAEKANLSRSYLADIERDRYNPSLSTLEAVAGALGIQVSAIV 62 Query: 798798 EEDDAVSD 798821 E+ + + Sbjct: 63 GEETLIKE 70 Score = 42.0 bits (97), Expect = 0.13 Identities = 20/59 (33%), Positives = 37/59 (62%) Frame = +1 Query: 135754 GAAVRRLRELQGWSQEQLAEYAGLNRSYVGEIERGSAIASIVTVDKLARAFGVSIECLL 135930 G ++ +R+ + +Q QLAE A L+RSY+ +IER S+ T++ +A A G+ + ++ Sbjct: 4 GQRIKAIRKERKLTQVQLAEKANLSRSYLADIERDRYNPSLSTLEAVAGALGIQVSAIV 62 >ref|NP_958300.1|hypothetical protein Length = 76 Score = 44.3 bits (103), Expect = 0.026 Identities = 23/60 (38%), Positives = 37/60 (61%) Frame = +3 Query: 798618 VGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTALL 798797 +GAR+R R+ LS ELA AGV T+ +VE ++P + +L ++ A++VPL L+ Sbjct: 16 IGARIRDARILTNLSQLELATLAGVDHKTIHRVEYGLSDPGLGLLLQIAHAVDVPLAVLV 75 >ref|NP_817718.1|gp41 Length = 400 Score = 43.9 bits (102), Expect = 0.034 Identities = 67/339 (19%), Positives = 122/339 (35%), Gaps = 58/339 (17%) Frame = +2 Query: 1241111 TVKELCGRFMSDYSKVRNKPSTQKGYQGNIDRNIIPILGRMKVQDVKRPDVATMMKKLES 1241290 TV+E C +++ ST GY+ + +I LG +++Q + + + ++ L Sbjct: 77 TVREACDDWLAGKRAANRAESTVDGYEEKLTV-VIEQLGEIEIQKLTKRHLDDLVTALRE 135 Query: 1241291 --------------TPMEANHTLAVMRKMFNMAEIWGLRTDGTNPCRHIPQYPQGKTTRL 1241428 +P N+ L ++ + + QG T R Sbjct: 136 GGLPSPNGKPRKPWSPRSVNYLLGLLVSILESEQ------------------KQGHTVRN 177 Query: 1241429 ITDEEMGKLFRHLDKVEAESSEPPIVT---------------LAIRLQFEFAA-RRSEIL 1241560 + +D++EA + P +T AI + A R +EI Sbjct: 178 VA--------ALVDRIEANPTPPDPLTESEVETLLAHIAGDRYAIAWELALAGFRLAEIS 229 Query: 1241561 LLEWTWVDLENRRVA---------------WPDSKTGGMSKPMSEEAHRLLSTVPR---- 1241683 L W VDL+ R V P S+ P+ ++ + Sbjct: 230 GLRWCDVDLDARTVTVQNTRLQRGKKRIEKTPKSRASRRELPLPDDLFAAFKAARKIQAA 289 Query: 1241684 --------HEGSLYVLPSLRDPLKHMTNGEHYNGWSRILKAAGVQHVGTHGIRHRSATDI 1241839 +E S YV+ + + +T N W+R+LKAAG++HV H RH T + Sbjct: 290 DQLRLGEAYEASGYVV--VNEAGTPLTPNAIENRWARVLKAAGLRHVRLHDARHTCGTLM 347 Query: 1241840 ANSGIPVKVGMVLTAHKTVAMFMR-YIHTEDAPVRQAAE 1241953 G+P + H + A ++ Y++ + + AA+ Sbjct: 348 HLRGVPTALISAWLGHASKAFTLQTYVNPKPESLVIAAQ 386 >ref|NP_938213.1|A transposase Length = 690 Score = 43.5 bits (101), Expect = 0.045 Identities = 84/370 (22%), Positives = 138/370 (37%), Gaps = 27/370 (7%) Frame = +1 Query: 1230922 QKRSLAAFHREVARVCKLQKLRMPARNTVALRIASLDPLKTTRLREGQDASRILQXXXXX 1231101 +KRS A H A + K + +MP+ + V + + + R G+ + L+ Sbjct: 194 EKRSARAAH---ALLEKHWQGQMPSLDQVYAFLRKVGNVSREVGRMGEHEIKALRPFIRR 250 Query: 1231102 XXXXSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAV 1231281 P + D D V +P RP +T ID+ TR + G L A SA+ Sbjct: 251 DFTKLLPTDVYSCDGHTFDAEVQHPMHGRPF-RPEITTIIDIRTRRIPGWSTGL-AESAL 308 Query: 1231282 SVGLCLAHAGCDKRPWLERLDVEMDWPMSGKPALLYLDNAAEFKSEALRRGCEQHGIRLD 1231461 V L A C K G PA+ Y+DN + + + +R RL Sbjct: 309 VVVDALRDA-CIK---------------GGVPAIFYVDNGSGYVNHMMRDEAVGLMGRLG 352 Query: 1231462 YRPLGQPHYG----GIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMA-------- 1231605 Y G++ER+ + ELPG ++ D++ + A+ K+ Sbjct: 353 IDMKNSLPYNSQARGVIERVHQSLWIRAAKELPGYIGADMDRQAKLATFKLTRRAIAKGG 412 Query: 1231606 ALTLRELERWLALA---VGTYHGSVHNGLLQ------------PPAARWAEAVARTGVPT 1231740 + L E ++A + Y+ H+ L + P WA A P Sbjct: 413 TMPLMSWESFVAFCEQQIAEYNDRPHSSLPRIVDPNTGRRRHMTPNEAWALHEAEGFSPM 472 Query: 1231741 VITRTTAFLVDFLPVLRRTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDPRDIS 1231920 +T A + F P + RT+ R Y+A L+ + + + D D S Sbjct: 473 RVTDDEARPL-FRPQVLRTVRRCELEFIGNRYFARELEEFHGDQ-----VAVGYDIHDAS 526 Query: 1231921 RIWVLEPEGQ 1231950 R+WV + EG+ Sbjct: 527 RVWVYDGEGR 536 >ref|NP_438136.1|hypothetical protein Length = 172 Score = 43.1 bits (100), Expect = 0.058 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Frame = +1 Query: 1445599 ILPNPWQPRRVFNEGKLTELAESIREVGLMQPIVVRRVENDYQIVAGERRWRAHKMLGID 1445778 I P PR N+ + +AESI+E G PIVV + + +I+ G R++A + LG++ Sbjct: 11 ITPYKNNPRN--NDEAVGPVAESIKEFGFKVPIVV---DKNGEIINGHTRYKAAQKLGLE 65 Query: 1445779 TIKAVVA-DCSDSDMAVLAMVEN 1445844 T+ +VA D S+ + + +N Sbjct: 66 TVPVIVADDLSEEQIKAFRLADN 88 >ref|NP_795571.1|hypothetical protein Length = 172 Score = 43.1 bits (100), Expect = 0.058 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Frame = +1 Query: 1445599 ILPNPWQPRRVFNEGKLTELAESIREVGLMQPIVVRRVENDYQIVAGERRWRAHKMLGID 1445778 I P PR N+ + +AESI+E G PIVV + + +I+ G R++A + LG++ Sbjct: 11 ITPYKNNPRN--NDEAVGPVAESIKEFGFKVPIVV---DKNGEIINGHTRYKAAQKLGLE 65 Query: 1445779 TIKAVVA-DCSDSDMAVLAMVEN 1445844 T+ +VA D S+ + + +N Sbjct: 66 TVPVIVADDLSEEQIKAFRLADN 88 >ref|NP_042036.1|DNA primase Length = 777 Score = 42.7 bits (99), Expect = 0.076 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 3/111 (2%) Frame = +2 Query: 480278 IAEGVATALAAWQATGWFSIAALSSGNLRPVAAMWRGRYPEAEMLVLAD---LGAGYEHA 480448 IAEG ATAL TG + ALSS NL +A++ R ++P ++++ AD G G + A Sbjct: 212 IAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLSGDGQKKA 271 Query: 480449 KQAALGTSSLLAEPRFAPEARIAGEVPTDFDDMAVLSGFGVVGELLREALY 480601 AA ++A P V D++D G GE R+A+Y Sbjct: 272 AAAADACEGVVALP----------PVFGDWNDAFTQYG----GEATRKAIY 308 >ref|NP_040602.1|Tail fiber protein Length = 401 Score = 42.7 bits (99), Expect = 0.076 Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 6/157 (3%) Frame = +3 Query: 787440 ASTSRQATATRHRSRPHDRRSAPSENRAAETRSSFPGRAAR------AASPSQRENGPTP 787601 A+TS A T + ++SA + A T++S +AR A+ S N + Sbjct: 197 AATSAGAAKTSETNAAASQQSAATSASTAATKASEAATSARDAVASKEAAKSSETNASSS 256 Query: 787602 G*ERAESTSALRTSHRSTGTAQPPPPRTCGYETGSDRSAPAQPCALPPAKKRRAGRCPQP 787781 A S +A S R+ T++ + ET ++RSA A AK AG Sbjct: 257 AGRAASSATAAENSARAAKTSETNARSS---ETAAERSASAAA----DAKTAAAGSASTA 309 Query: 787782 SLRCPHAAGRALRRTISMRVQATAGPDRANPARAAED 787892 S + AAG A+ + S A N A+ AED Sbjct: 310 STKATEAAGSAVSASQSKSAAEAAAIRAKNSAKRAED 346 Score = 40.0 bits (92), Expect = 0.49 Identities = 67/288 (23%), Positives = 110/288 (38%), Gaps = 10/288 (3%) Frame = -2 Query: 1370909 IALAAGCGGSSHGDQSSPAPGANQDSTRPVVSAALPAPGATGVRTATKIAVTFSKDMSPA 1370730 +A A S D A A+ + + A T+ A + +++ S Sbjct: 113 VARNASVVAQSTADAKKSAGDASASAAQVAALVTDATDSARAASTSAGQAASSAQEASSG 172 Query: 1370729 TISASSFTVSGPGAAAIAGTV--SYNVSSRAAIFIPTNASLPVNSALTATITTAAKDTSG 1370556 +AS+ +AA A + + S+ AA TNA+ SA T+ T A K + Sbjct: 173 AEAASAKATEAEKSAAAAESSKNAAATSAGAAKTSETNAAASQQSAATSASTAATKASEA 232 Query: 1370555 NALLNNFVWTFTTGAVAEVTPPTVSLTVPAAGAANTPLNTRIAATFSEDMDPSTISTASF 1370376 + V + +E S AA +A N+ AA SE T + +S Sbjct: 233 ATSARDAVASKEAAKSSETN--ASSSAGRAASSATAAENSARAAKTSE-----TNARSSE 285 Query: 1370375 MLTDASGAQVAGTVSYAAGARSAIFTPTTPALLNAGTAYNATITTAAKDLSGNALSSNFT 1370196 + S + A + AAG+ S T T A AG+A +A+ + +A + + ++ Sbjct: 286 TAAERSASAAADAKTAAAGSASTASTKATEA---AGSAVSASQSKSAAEAAAIRAKNSAK 342 Query: 1370195 WTFNTGSS-----ADTTPPSIVSTNPANAADG---VCTNKSVNVTFSE 1370076 + S+ ADTT IV + A + T K+V V E Sbjct: 343 RAEDIASAVALEDADTTRKGIVQLSSATNSTSETLAATPKAVKVVMDE 390 >ref|YP_024421.1|Hypothetical protein Length = 741 Score = 42.4 bits (98), Expect = 0.100 Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 15/120 (12%) Frame = +1 Query: 1337131 GGDIALTGGALSLNSPGGGGVAVLSENGSTFTGDGVA-ISVSASGGDAAVKSV-----GN 1337292 GG GG S+ GGGG A++S S G A I V GG AA +++ GN Sbjct: 512 GGSGRTAGGNDSIGGGGGGGAALVSVLSSNAIGGQTATIVVGGGGGGAANRAIAAGNGGN 571 Query: 1337293 SHV--------SLSGGSVTLNGTSGETGLLAQGATLTA-VGVPVSVTASQSSAGTVQGGG 1337445 S V S +GG NG G G ++ VG ++ +++G GGG Sbjct: 572 SSVSGAGIVGLSWTGGRAGANGVQGYYASGGNGGNNSSNVGAGAGASSGNAASGVSGGGG 631 >ref|NP_049793.1|Hoc head outer capsid protein Length = 376 Score = 42.4 bits (98), Expect = 0.100 Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 7/160 (4%) Frame = +3 Query: 223824 TYSWTLTDTSGQQVVSGSGADWNLSADVKN--GNYTLKVLAS---SVKGQRSATATLALK 223988 TY+W++ + V GA+ S +K G T+KV+A+ S G +A AT + Sbjct: 36 TYAWSVDN------VPQDGAEATFSYVLKGPAGQKTIKVVATNTLSEGGPETAEATTTIT 89 Query: 223989 VERAVAPKPVEAKISGPVEIRAGTTIELSGAQSVNPNGTPTTYLWTVPPQL--GSNAETP 224162 V+ + + P GT ++ + A + P+G TY W V G T Sbjct: 90 VKNKTQTTTLAVTPASPAAGVIGTPVQFTAALASQPDGASATYQWYVDDSQVGGETNSTF 149 Query: 224163 SVRLTAPANATVGAQYTIKLSVYDTQNKLSSTASYTVTVK 224282 S T + + + YD + S+ S TV K Sbjct: 150 SYTPTTSGVKRIKCVAQVTATDYDALSVTSNEVSLTVNKK 189 >ref|NP_878228.1|Int Length = 326 Score = 42.4 bits (98), Expect = 0.100 Identities = 18/49 (36%), Positives = 28/49 (57%) Frame = -1 Query: 852690 HTLRHSFATHLLEQKVDIRVIQVLLGHAKLENTALYVQVATDLLHEVTS 852544 H LRH+FA+H + +I +Q +LGHA ++ T Y +A D L + Sbjct: 268 HILRHTFASHFMMNGGNIIALQQILGHASIQQTMAYAHLAPDYLQNAVA 316 >ref|NP_839878.1|Int Length = 326 Score = 42.4 bits (98), Expect = 0.100 Identities = 18/49 (36%), Positives = 28/49 (57%) Frame = -1 Query: 852690 HTLRHSFATHLLEQKVDIRVIQVLLGHAKLENTALYVQVATDLLHEVTS 852544 H LRH+FA+H + +I +Q +LGHA ++ T Y +A D L + Sbjct: 268 HILRHTFASHFMMNGGNIIALQQILGHASIQQTMAYAHLAPDYLQNAVA 316 >ref|NP_075302.1|gp35 Length = 500 Score = 42.0 bits (97), Expect = 0.13 Identities = 25/73 (34%), Positives = 37/73 (50%) Frame = +3 Query: 1265538 RPGDTLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFA 1265717 +P D +V +++DRL R +RHL VH V++ A DTTT +V + Sbjct: 70 QPFDVIVAYRVDRLTRSIRHLQQLVH--WAEDHKKLVVSATEAHFDTTTPFAAVVIALMG 127 Query: 1265718 ALAEFERELIAER 1265756 +A+ E E I ER Sbjct: 128 TVAQMELEAIKER 140 >ref|NP_536643.1|hypothetical protein Length = 112 Score = 42.0 bits (97), Expect = 0.13 Identities = 19/61 (31%), Positives = 40/61 (65%) Frame = +1 Query: 959641 RAQRGMTRKQLALQSGVSIPHLARIESGEGNVSVSLLQKLSVALNLPIQDLLADGSSQNA 959820 R ++ +T++Q+A ++GVS+ L R+E GE V ++ +++LS AL + + ++ G+ + Sbjct: 19 RLRKRLTQQQVAERAGVSLRMLQRLEQGERVVDIAQIRRLSAALEISVGHMIMHGAVSSP 78 Query: 959821 D 959823 D Sbjct: 79 D 79 >ref|NP_852723.1|putative integrase Length = 348 Score = 42.0 bits (97), Expect = 0.13 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 9/242 (3%) Frame = +2 Query: 1241222 LGRMKVQDVKRPDVATMMKKLESTPMEA---NHTLAVMRKMFNMAEIWGLRTDGTNPCRH 1241392 LG K+ ++ R + + + ++A N L +R + A W D + C Sbjct: 95 LGDKKLNEIDRTLIKFIQYEKAKEGVKARTINAVLQQIRVILRAAVEW----DWLDKCPA 150 Query: 1241393 IPQYPQGKT-TRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRLQFEFAARRSEILLLE 1241569 I P+ K R +T E +L L + PIV AI R S I L+ Sbjct: 151 IKFLPEPKRRVRWLTQHEEIRLIEELPE-----HLKPIVQFAILT----GLRMSNITQLK 201 Query: 1241570 WTWVDLENRRVAW---PDSKTGG-MSKPMSEEAHRLL-STVPRHEGSLYVLPSLRDPLKH 1241734 W+ +DL R+ AW SKTG + P++++A ++ S +H+ +++ P++ Sbjct: 202 WSQIDLSKRQ-AWINSEQSKTGNSIGVPLNDKAIEVIVSQFGKHKENVFTYKG--KPVR- 257 Query: 1241735 MTNGEHYNGWSRILKAAGVQHVGTHGIRHRSATDIANSGIPVKVGMVLTAHKTVAMFMRY 1241914 + N + + L+ AG++ H +RH AT SG P+ V L +Y Sbjct: 258 IANTKAFRA---ALQRAGIKDFRFHDLRHTWATRHIMSGTPLYVLQELGGWSKSDTVRKY 314 Query: 1241915 IH 1241920 H Sbjct: 315 AH 316 >ref|NP_818270.1|gp220 Length = 552 Score = 41.6 bits (96), Expect = 0.17 Identities = 31/117 (26%), Positives = 50/117 (42%) Frame = +3 Query: 153162 GLVFKVIPDAAARSAAFETGALDLGGENPVPLTDLPRLTQLPQLAVETRGYRFLEPLSEI 153341 G+ ++++PD L G + LPRLT++ L G +E L++ Sbjct: 251 GITWEMVPDQFLNQFLVWEALLSQGVPQTALMRQLPRLTRIG-LTTGATGRAIVEQLTDA 309 Query: 153342 DFNLDHPILKDLRVRQAIAHAINPQVVQRTIAYGYADLSPTPITPGSPYHDAKITAY 153512 + R+++A H IN V QRT A GY++ + TP DA A+ Sbjct: 310 E-----------RLKKARVHPINVLVAQRTYAQGYSERGSSTWTPDRKITDALDAAF 355 >ref|NP_758949.1|ORF58 Length = 210 Score = 41.2 bits (95), Expect = 0.22 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +2 Query: 1444526 VTRLKEPDGKIIITAQLKGGSAKTTTTMCLAQGLSLRGRKVLVLDLDPQASLSE 1444687 + R + K+I KGG+ KTT + +A L G KVL++DLDPQ S ++ Sbjct: 12 INREENEMAKLIAILNQKGGAGKTTISTNVASQLHADGHKVLLVDLDPQGSATD 65 >ref|NP_958191.1|gene 15 protein Length = 333 Score = 41.2 bits (95), Expect = 0.22 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%) Frame = +3 Query: 1455345 KLSFIQAVRGIAALMVVLYHG---SGFISPYGTGLGDLLFGAAGSMGVTLFFIVSGIIMV 1455515 K + R +AA+MV++ H SG PY G F +AG + V +FF +SG ++ Sbjct: 3 KSNCFDTARLVAAMMVLVSHHYALSGQPEPYLFG-----FESAGGIAVIIFFSISGYLIS 57 Query: 1455516 HTTARSDGSPAYVLEFLIKRFSRVWP 1455593 + RSD ++F+ KR R++P Sbjct: 58 KSAIRSDS----FIDFMAKRARRIFP 79 >ref|NP_932576.1|hinge connector of long tail fiber distal connector Length = 1420 Score = 41.2 bits (95), Expect = 0.22 Identities = 75/318 (23%), Positives = 114/318 (35%), Gaps = 17/318 (5%) Frame = -1 Query: 119988 GQGGLLFGRKAFVGLKSDTYGTLTAGRQYSVSNDATSS----FASGADWAASGLGYGTRA 119821 GQ + A + LKS T G +T QY + ND+T + + + L Y T Sbjct: 1042 GQLTIHTANNAPLELKSTTAGVVTP--QYIIGNDSTGAQRWYVGQASPNSPDVLLYSTAN 1099 Query: 119820 GDVDNVDTSNRIQNALKYQSPVFRGLSFGVLYSFGGQAGQFSRNAVTDVAVSYA--NGPV 119647 G ++ + N ++P+ L G AG R ++S N PV Sbjct: 1100 GTYLRLEANQISFN----KNPISTALQ-------GAAAGSLVRRDFLQTSLSSQTPNNPV 1148 Query: 119646 KLGASYMFTKDPYYATFGDQGNSSTPTSSATGSNNNMPSRIYGGYASAGSQQIITAGGSY 119467 +GAS Y T G S + GS +N P++ G + II Y Sbjct: 1149 YIGASANLNN---YQTPGYYYQDSNANA---GSGSNYPTQQAGALVVTKAAGIIQEYTVY 1202 Query: 119466 ALGAATI-----------AVLYSNTQFQNLGTVNAVGSFGTRYNGGTATFNSGELNVKYL 119320 GA + A++Y +T+ V A+ G GG S ++ Sbjct: 1203 GTGARYVRAFYTNVWSAWALVYDSTRPPGATAVGALPIAGGTLTGGYLQLQSATNSILEF 1262 Query: 119319 LTPALTLAGAYIYTHNSGADGVGSANYSQVNLGTIYALSKRTSLYAIGFYETASGVDSTG 119140 P A ++ ++G G +S N G + R +L A G T ++ G Sbjct: 1263 HQPGRHAAMIFL------SNGTGQLRFSTSN-GAAGETNVRMTLDANGALATTGSIN--G 1313 Query: 119139 KQAVADFSGASYSSNNRQ 119086 V D YS NN Q Sbjct: 1314 GAGVYDVGQRVYSPNNPQ 1331 >ref|YP_164319.1|hypothetical protein Length = 116 Score = 40.8 bits (94), Expect = 0.29 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 4/106 (3%) Frame = +1 Query: 1462225 WYEMNHASSGLRA--RSCCHDCWKCCS--SRRCGPRRKRLRHRVWFAGYPMAASRPRSEV 1462392 W ++ S RA R CC CW CC+ RRC R R W+ P A R Sbjct: 19 WLGLSAVSEAPRASARRCCTGCW-CCTPIRRRCRMRLSTDRRTCWWIRQPSAMRRA---- 73 Query: 1462393 CTHTLHAPGRLLNLRKKPHCRAQLSLNASTARSAWRQWNICSLGAW 1462530 T APG ++R + + + T+ + W C +G W Sbjct: 74 ---TGSAPGCWWSIRPRQRIASPAPFVSCTSMTPW-----CRMGCW 111 >ref|NP_958209.1|gene 33 protein Length = 322 Score = 40.8 bits (94), Expect = 0.29 Identities = 39/162 (24%), Positives = 66/162 (40%) Frame = +2 Query: 194711 DHGRRLPIPRREPGRNVESQHEADAEMDEHRQQCRRVFENPGRGVAEHHALHPHEDGRER 194890 DH + + R + E++ +A+ E EH ++ +R E R AE A E R Sbjct: 136 DHEIAILMDREFDRQREEARLKAEQEKREHEERLKREAEEKARAEAEAKAKAEIEAAARR 195 Query: 194891 HGKREQQERRGPREFAHRGRQDQELAREDAEWRHAQDRERSEHHAPPDSRAHA*QPADIV 195070 + + R RE ++ Q A+E AE ER + A R A + A+ Sbjct: 196 EAEAKAAAERAERERIEAEQRAQREAKEAAE-----RAEREKQAAIEAERRKAQEEAE-- 248 Query: 195071 DRLGAGLLRRMPDGEEDGRLHERMHGHVEQPRKRRDGSAKPE 195196 +RR + +E R+ E E+ R+ +D + + E Sbjct: 249 ------RIRREAEAKEQARIAEEKRIKDEEERRAKDKAHRKE 284 >ref|NP_861884.1|Hoc head outer capsid protein Length = 471 Score = 40.8 bits (94), Expect = 0.29 Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 5/162 (3%) Frame = +3 Query: 223824 TYSWTLTDTSGQQVVSGSGADWNLSADVKNGNYTLKVLAS---SVKGQRSATATLALKVE 223994 TY WT+ D + Q + + D+ L++ G +KV+A+ S A A+ + V Sbjct: 36 TYVWTVDDIA--QESTAATMDYTLASPA--GTKKIKVVATNTLSAGDPEIAEASTTITVN 91 Query: 223995 RAVAPKPVEAKISGPVEIRAGTTIELSGAQSVNPNGTPTTYLWTVPPQL--GSNAETPSV 224168 + V + P + GT + S P+G Y W V G T Sbjct: 92 KKENNSTVAVTPASPAAVEIGTATTFTANVSNQPSGAAIAYTWKVDGVAVDGQKQSTFEY 151 Query: 224169 RLTAPANATVGAQYTIKLSVYDTQNKLSSTASYTVTVKAGET 224294 T+ ++ T+ + Y + SS S TV KA + Sbjct: 152 TPTSEGTKSITCSVTVTATDYVDKTVESSAVSLTVNKKANSS 193 >ref|NP_958298.1|hypothetical protein Length = 393 Score = 40.8 bits (94), Expect = 0.29 Identities = 26/60 (43%), Positives = 35/60 (58%) Frame = +3 Query: 798615 DVGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTAL 798794 ++GAR+ A R A+ LS ELA A VS+ + +ER +PS LE L AL+V T L Sbjct: 7 ELGARIAARRRARRLSQPELAAVAHVSLSMLRAIERGARSPSDATLEALADALDVDGTQL 66 >ref|NP_958084.1|gp27 Length = 349 Score = 40.8 bits (94), Expect = 0.29 Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 3/175 (1%) Frame = -1 Query: 853059 DEVRRLIEAAGNLKHQTA---LSVAYGAGLRASEVVALKVTDIDSQRMTLRIEQGKGRRD 852889 +++ +L+ A H+ + + G R SE L + ++T + KG+++ Sbjct: 181 EQIPQLLLACHQYGHEDLTQIVEICLATGARWSEAERLTRPQLSPYKLTFT--KTKGKKN 238 Query: 852888 RYAMLSPVLLERLRVWWHVARAQGRMPDGGWLFPGLDPVDPLSTRQLNRXXXXXXXXAQI 852709 R ++ L E+L + QGRM P + L ++ Sbjct: 239 RTVPITKWLYEKL------STRQGRM---------FKPCYQEFKKML------LLTDIEL 277 Query: 852708 DKRVSMHTLRHSFATHLLEQKVDIRVIQVLLGHAKLENTALYVQVATDLLHEVTS 852544 + H LRH+F H + +I V+Q +LGHA + T Y A D L + + Sbjct: 278 TEGQKTHVLRHTFGAHFMMNGGNILVLQKILGHANIRETMKYSHFAPDHLEQAVT 332 >ref|NP_438114.1|integrase-like protein Length = 365 Score = 40.4 bits (93), Expect = 0.38 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 21/203 (10%) Frame = +2 Query: 1241417 TTRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRLQFEFAA----RRSEILLLEWTWVD 1241584 T + T EE+ R VEAE TL +RL + + R E++ L+ T D Sbjct: 171 TKKYYTKEELNTFLR---LVEAEE------TLEMRLIYRLLSYGGFRIGELIALKDTDFD 221 Query: 1241585 LENRRVAWPDS----KTG-GMSKPMSEEAHRLLS--TVPRHEGSLYVLPSLRD-----PL 1241728 N ++ + K G + P +++++R +S LY+ S++ L Sbjct: 222 FRNNTISITKTIAYTKEGWAVQSPKTKKSNRTISMDAETMSLAKLYIKQSIKPLHGSFKL 281 Query: 1241729 KHMTNGEHYNGWSRILKAAGVQHVGTHGIRHRSATDIANSGIPVKVGMVLTAHKTVAMFM 1241908 + + R + G++ + HG RH A+ + +GIP K+ H +A+ M Sbjct: 282 FNFASDTVRKRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITM 341 Query: 1241909 -RYIH----TEDAPVRQAAELVA 1241962 Y H ++D + AELVA Sbjct: 342 DLYTHLSKKSKDNVADKLAELVA 364 >ref|YP_077221.1|Hypothetical protein Length = 468 Score = 40.4 bits (93), Expect = 0.38 Identities = 90/393 (22%), Positives = 153/393 (38%), Gaps = 16/393 (4%) Frame = -3 Query: 1126870 LLVAFKFFLLARLLGPQSIGLIAACLMALSIAESLTEMGMSHALIQRREL---LDQRSLD 1126700 ++ +F FF++A L + A + S A SL E+ + I RE+ L + +D Sbjct: 18 IISSFIFFVVAAKLSTPAFFGKVAIIQLFSTAVSLFEL--VNTSIVSREIAYQLAKNEID 75 Query: 1126699 ALWTATALRGLLLTVVLFAASGLIARLMSIPEGTTVLRMVALVPFARCIASVRVVIAQRE 1126520 + +TA+ + F S L L++ + LR + + I Sbjct: 76 KKFISTAI------ITSFLISPLFLALLAF---SNYLRFLIPYLILFLLYHYLTAILIGL 126 Query: 1126519 RRFRTVALLTTTFVMADFVMSAVA----ALTYHEVVWVLAAL--PLSEFLKAIASHIAFR 1126358 RF + + F + + +S +A ++ +W LAAL + FL I S Sbjct: 127 NRFTENTISWSVFFIIRWGVSVIAVIFNSILLFIAIWTLAALVCDIYSFLIVIKSVSGLP 186 Query: 1126357 TKPRLNFDTRPLGEVMEFGRWVWASSLLTIIVNQLDRIITVKTFGVQTLGLYQTASRLAQ 1126178 FD +++ + S+ + Q DR+I V G L +YQ A+ LA Sbjct: 187 ----FAFDKALFKRLVKESYALNLKSIASFFSTQGDRLIVVSLLGTYFLAIYQFAALLAD 242 Query: 1126177 F------GVADFGIAMSQYLFPNFSELARRDKSRAAHYALALFSQLGTIA-LVVATFLCV 1126019 V D + S Y ++ R SR A+ + + + I LV+ FL Sbjct: 243 VPGMILRAVNDSVLVSSSYFKAKGADELR--MSRLTFKAVTILTFVTAIVFLVLVRFLVP 300 Query: 1126018 AARDIIQLALGAQWSGAVPFFRIFVYLMAAGVLVGLLTSYLRGTGRPSRVTRGTVAQLLC 1125839 A + +L A ++ F +L VL + SY R T ++ + Sbjct: 301 AFFPAYKASLDALSILSLSFIFSIPFL----VLTQFIISYKRDL---RLFTLISLIDAVL 353 Query: 1125838 LLVSSAILVPWLGSIGVAFAATISVFVCMTLML 1125740 ++++S LVP LG +G A + I V L L Sbjct: 354 VVLTSIALVPRLGILGAAISQLIVAVVNNVLNL 386 >ref|NP_795541.1|putative integrase Length = 384 Score = 40.4 bits (93), Expect = 0.38 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 21/203 (10%) Frame = +2 Query: 1241417 TTRLITDEEMGKLFRHLDKVEAESSEPPIVTLAIRLQFEFAA----RRSEILLLEWTWVD 1241584 T + T EE+ R VEAE TL +RL + + R E++ L+ T D Sbjct: 190 TKKYYTKEELNTFLR---LVEAEE------TLEMRLIYRLLSYGGFRIGELIALKDTDFD 240 Query: 1241585 LENRRVAWPDS----KTG-GMSKPMSEEAHRLLS--TVPRHEGSLYVLPSLRD-----PL 1241728 N ++ + K G + P +++++R +S LY+ S++ L Sbjct: 241 FRNNTISITKTIAYTKEGWAVQSPKTKKSNRTISMDAETMSLAKLYIKQSIKPLHGSFKL 300 Query: 1241729 KHMTNGEHYNGWSRILKAAGVQHVGTHGIRHRSATDIANSGIPVKVGMVLTAHKTVAMFM 1241908 + + R + G++ + HG RH A+ + +GIP K+ H +A+ M Sbjct: 301 FNFASDTVRKRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITM 360 Query: 1241909 -RYIH----TEDAPVRQAAELVA 1241962 Y H ++D + AELVA Sbjct: 361 DLYTHLSKKSKDNVADKLAELVA 383 >ref|YP_024964.1|putative prophage repressor protein Length = 244 Score = 40.4 bits (93), Expect = 0.38 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = +3 Query: 798618 VGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTALL 798797 +G R+R LR A+GL++ +LA G+S +VS+ E ++ P L L + L + LL Sbjct: 7 IGTRIRELRKAKGLTLQQLADVFGISRASVSEWESGRSKPDANKLVLLAKELHTAVEYLL 66 Query: 798798 EED--DAVS 798818 D DA+S Sbjct: 67 NGDTNDAMS 75 >ref|NP_510895.1|similar to phage phi 11 integrase Length = 349 Score = 40.0 bits (92), Expect = 0.49 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = -1 Query: 852696 SMHTLRHSFATHLLEQKVDIRVIQVLLGHAKL-ENTALYVQVATDLLHEVTSPLDR 852532 ++H LRHS+A++L VDI V+Q L+ HA++ E Y + T H+ + D+ Sbjct: 294 NIHALRHSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFDK 349 Database: Phage.aa Posted date: Jul 11, 2005 10:35 AM Number of letters in database: 3,019,461 Number of sequences in database: 14,420 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,130,138,018 Number of Sequences: 14420 Number of extensions: 149012606 Number of successful extensions: 509110 Number of sequences better than 0.5: 97 Number of HSP's better than 0.5 without gapping: 14255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 508226 length of database: 3,019,461 effective HSP length: 138 effective length of database: 1,029,501 effective search space used: 504922883454 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig481 (3,363,536 letters) Database: Phage.aa 14,420 sequences; 3,019,461 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_932363.1|hypothetical protein 381 e-103 ref|NP_536383.1|DNA adenine methylase 330 4e-88 ref|NP_945057.1|gp26 330 4e-88 ref|YP_164085.1|Dam modification methylase 322 1e-85 ref|NP_899510.1|nicotinamide phosphoribosyl transferase 309 9e-82 ref|NP_932427.1|hypothetical protein 281 3e-73 ref|NP_944261.1|putative TnpA transposase 255 1e-65 ref|NP_612994.1|hypothetical protein 254 3e-65 ref|NP_049482.1|serine 254 3e-65 ref|NP_944004.1|hypothetical protein 243 6e-62 ref|NP_945090.1|gp59 235 1e-59 ref|NP_542569.1|ribonucleotide reductase 234 2e-59 ref|NP_046572.1|ABC transporter 221 3e-55 ref|YP_024539.1|putative nicotinamide phosphoribosyl transferase 208 2e-51 ref|NP_536395.1|ISBt3 transposase subunit protein 172 1e-40 ref|NP_958672.1|Bbp2 168 2e-39 ref|NP_996565.1|hypothetical protein predicted by GeneMark 168 2e-39 ref|NP_996613.1|hypothetical protein predicted by GeneMark 168 2e-39 ref|YP_006950.1|DNA polymerase 164 3e-38 ref|NP_859396.1|hypothetical protein 162 1e-37 ref|NP_852498.1|DNA polymerase I 161 2e-37 ref|NP_958229.1|gene 55 protein 155 2e-35 ref|YP_024516.1|putative DNA polymerase 149 9e-34 ref|YP_025041.1|putative transposase B 144 4e-32 ref|NP_817633.1|gp44 139 1e-30 ref|NP_061653.1|transposase 138 3e-30 ref|NP_945089.1|gp58 127 5e-27 ref|NP_835691.1|similar to DNA helicase 124 3e-26 ref|NP_899369.1|GTP cyclohydrolase I 124 3e-26 ref|NP_075308.1|gp41 124 4e-26 ref|YP_024986.1|DNA polymerase I 122 1e-25 ref|YP_024429.1|DNA polymerase I 122 2e-25 ref|NP_945019.1|unknown 122 2e-25 ref|NP_046860.1|DNA polymerase 117 7e-24 ref|NP_039708.1|predicted 66.2Kd protein 116 1e-23 ref|NP_046584.1|putative transglycosylase 114 4e-23 ref|NP_612995.1|hypothetical protein 106 1e-20 ref|NP_049483.1|hypothetical protein 106 1e-20 ref|NP_817767.1|gp6 104 4e-20 ref|YP_164694.1|orf59 103 8e-20 ref|YP_006556.1|Ppp 103 1e-19 ref|YP_024677.1|gp04 102 2e-19 ref|NP_039714.1|predicted 76.3Kd protein 101 4e-19 ref|YP_024510.1|putative ribonucleotide reductase large subunit 100 1e-18 ref|NP_817639.1|gp50 99 1e-18 ref|NP_040641.1|Nin protein 99 1e-18 ref|NP_047956.2|gp11 99 2e-18 ref|NP_958232.1|gene 58 protein 98 3e-18 ref|NP_076796.1|Orf17 96 2e-17 ref|YP_195262.1|hypothetical protein 95 3e-17 ref|NP_818603.1|gp65 95 4e-17 ref|NP_203418.1|DNA adenine methylase Mox 94 5e-17 ref|NP_795678.1|putative helicase 93 1e-16 ref|NP_542554.1|putative DNA-dependent DNA polymerase 91 7e-16 ref|YP_195155.1|hypothetical protein 91 7e-16 ref|NP_076827.1|Csp 89 2e-15 ref|NP_758949.1|ORF58 88 3e-15 ref|NP_049845.1|NrdA aerobic NDP reductase, large subunit 88 3e-15 ref|NP_064753.1|RP DNA pol 88 4e-15 ref|NP_695158.1|minor capsid protein 87 1e-14 ref|NP_943839.1|gp61 86 1e-14 ref|NP_612844.1|Gp15 protein 86 2e-14 ref|NP_813726.1|gp11 86 2e-14 ref|NP_817817.1|gp56 83 1e-13 ref|NP_640280.1|DNA polymerase 83 1e-13 ref|YP_195168.1|DNA polymerase gp43 82 2e-13 ref|NP_046877.1|putative non-heme haloperoxidase 82 2e-13 ref|YP_164275.1|DNA adenine methyltransferase 81 4e-13 ref|NP_858986.1|DNA polymerase lacking N-terminal exonuclease do... 81 5e-13 ref|NP_899330.1|DNA polymerase 80 7e-13 ref|NP_112710.1|ORF47 80 9e-13 ref|NP_076626.1|endopeptidase 80 9e-13 ref|NP_108727.1|minor structural protein 3 80 1e-12 ref|YP_024841.1|Pas55 80 1e-12 ref|NP_663686.1|structural protein 79 2e-12 ref|NP_943827.1|gp49 78 4e-12 ref|NP_523322.1|gene 5B protein 77 8e-12 ref|NP_523320.1|DNA polymerase 77 8e-12 ref|NP_046614.1|histone-like prokaryotic DNA-binding protein family 77 8e-12 ref|NP_040655.1|unknown protein 77 1e-11 ref|NP_046865.1|putative ribonucleotide reductase 76 1e-11 ref|NP_599080.1|unknown 75 2e-11 ref|NP_041982.1|DNA polymerase 75 2e-11 ref|NP_817650.1|gp61 75 3e-11 ref|YP_195185.1|ribonucleotide reductase A subunit 75 3e-11 ref|NP_543076.1|putative DNA methylase 75 3e-11 ref|NP_536388.1|hypothetical protein 75 4e-11 ref|NP_945062.1|gp31 75 4e-11 ref|NP_891805.1|aerobic NDP reductase large subunit 74 5e-11 ref|NP_848283.1|DNA polymerase 74 6e-11 ref|YP_195210.1|virion structural protein 74 8e-11 ref|NP_690785.1|site-specific recombinase for integration and ex... 74 8e-11 ref|NP_817947.1|gp96 73 1e-10 ref|NP_861929.1|NrdA aerobic NDP reductase, large subunit 73 1e-10 ref|NP_047359.1|maturation protein 73 1e-10 ref|NP_666012.1|adenine methyltransferase 72 2e-10 ref|NP_040341.1|putative transposase 72 2e-10 ref|YP_024988.1|superfamily II DNA 71 4e-10 ref|YP_024431.1|superfamily II DNA 71 4e-10 ref|NP_511017.1|methylase 71 4e-10 ref|NP_958716.1|Bbp47 70 9e-10 ref|NP_996608.1|DEAD box helicase 70 9e-10 ref|NP_996656.1|DEAD box helicase 70 9e-10 ref|NP_040700.1|hypothetical protein 69 2e-09 ref|NP_945276.1|transferase 69 2e-09 ref|NP_958699.1|adenine DNA methyltransferase 69 2e-09 ref|YP_024936.1|gp16 69 3e-09 ref|NP_510894.1|phage assembly protein 68 4e-09 ref|NP_958675.1|reverse transcriptase 68 5e-09 ref|NP_996568.1|reverse transcriptase 68 5e-09 ref|NP_996616.1|hypothetical protein predicted by GeneMark 68 5e-09 ref|NP_052094.1|5B protein 67 8e-09 ref|NP_052093.1|DNA polymerase 67 8e-09 ref|NP_818228.1|gp169 67 1e-08 ref|NP_853574.1|gp14 67 1e-08 ref|NP_049662.1|gp43 DNA polymerase 66 1e-08 ref|NP_944991.1|putative ribonucleoside triphosphate reductase a... 66 1e-08 ref|NP_570330.1|DNA polymerase 66 2e-08 ref|NP_046713.1|ribunucleotide reductase large subunit 66 2e-08 ref|YP_024945.1|gp25 65 2e-08 ref|NP_051002.1|hypothetical protein 65 3e-08 ref|YP_006632.1|putative DNA adenine methylase 65 4e-08 ref|NP_803570.1|ORF004 64 5e-08 ref|YP_024948.1|gp28 64 5e-08 ref|NP_943925.1|NrdA-B aerobic NDP reductase large subunit 64 5e-08 ref|NP_040579.1|G IV protein 64 7e-08 ref|NP_835679.1|similar to DNA-directed DNA polymerase 64 7e-08 ref|NP_899523.1|aerobic ribonucleoside diphosphate reductase lar... 64 7e-08 ref|NP_039614.1|gene IV product 64 9e-08 ref|YP_006863.1|putative serine 63 1e-07 ref|NP_818403.1|gp105 63 1e-07 ref|NP_818239.1|gp188 62 3e-07 ref|NP_051006.1|P45 62 3e-07 ref|NP_758910.1|ORF17 61 4e-07 ref|NP_892105.1|DNA adenine-methylase 61 4e-07 ref|NP_944929.1|putative dihydrofolate reductase 61 4e-07 ref|NP_958711.1|Bbp42 61 6e-07 ref|NP_996604.1|DNA polymerase 61 6e-07 ref|NP_996652.1|DNA polymerase 61 6e-07 ref|NP_777327.1|hypothetical protein 61 6e-07 ref|NP_758912.1|ORF19 60 1e-06 ref|NP_803332.1|helicase 60 1e-06 ref|NP_818050.1|gp77 60 1e-06 ref|NP_877458.1|putative DNA directed DNA polymerase 60 1e-06 ref|NP_758929.1|ORF37 60 1e-06 ref|NP_445672.1|putative helicase 60 1e-06 ref|NP_705636.1|gp10 59 2e-06 ref|NP_775225.1|DNA polymerase1 59 3e-06 ref|NP_861746.1|gp43 DNA polymerase 59 3e-06 ref|NP_047372.1|putative maturation protein 58 4e-06 ref|NP_958114.1|gp10 58 4e-06 ref|YP_006924.1|putative aerobic ribonucleoside diphosphate redu... 58 4e-06 ref|NP_958680.1|Bbp11 57 6e-06 ref|NP_996573.1|hypothetical protein predicted by GeneMark 57 6e-06 ref|NP_996621.1|hypothetical protein predicted by GeneMark 57 6e-06 ref|NP_061524.1|Orf28 57 8e-06 ref|NP_943895.1|DNA polymerase 57 8e-06 ref|NP_046669.1|similar to part of DNA ligases 56 1e-05 ref|NP_064745.1|gp7 56 2e-05 ref|NP_705672.2|gp49 56 2e-05 ref|NP_803396.1|tail length tape measure protein 55 2e-05 ref|NP_058454.1|orf 16 55 2e-05 ref|NP_818049.1|gp76 55 2e-05 ref|NP_958155.2|gp48 55 2e-05 ref|NP_061640.1|phi PVL ORF 15 and 16 homologue 55 3e-05 ref|NP_803346.1|tail fiber protein 55 3e-05 ref|NP_891597.1|DNA polymerase 55 3e-05 ref|YP_195122.1|hypothetical protein 55 3e-05 ref|NP_932391.1|DNA polymerase, N-terminal fragment 55 4e-05 ref|NP_899254.1|dihydrofolate reductase 54 5e-05 ref|NP_818455.1|gp155 54 9e-05 ref|NP_542261.1|unknown 53 1e-04 ref|NP_817550.1|gp101 53 1e-04 ref|NP_944318.1|gp10 53 1e-04 ref|YP_195243.1|hypothetical protein 53 2e-04 ref|NP_817998.1|gp25 52 2e-04 ref|YP_006537.1|Dmt 52 2e-04 ref|NP_108695.1|putative methylase 52 2e-04 ref|NP_945066.1|gp35 52 2e-04 ref|YP_024421.1|Hypothetical protein 52 3e-04 ref|NP_075512.2|hypothetical protein 52 3e-04 ref|NP_848235.1|integrase 52 3e-04 ref|NP_817487.1|gp37 52 3e-04 ref|NP_075300.1|gp33 52 3e-04 ref|YP_077258.1|Nucleoside-diphosphate-sugar epimerase 51 4e-04 ref|NP_817477.1|gp27 51 4e-04 ref|NP_813780.1|internal virion protein D 50 8e-04 ref|NP_536413.1|putative DNA cytosine methylase 50 8e-04 ref|NP_835564.1|hypothetical protein 50 0.001 ref|NP_958230.1|gene 56 protein 50 0.001 ref|NP_958615.1|77ORF001 50 0.001 ref|YP_112541.1|modification methylase 50 0.001 ref|NP_052116.1|internal virion protein D 49 0.002 ref|NP_690787.1|immunity repressor 49 0.002 ref|NP_690779.1|ORF46 49 0.002 ref|NP_570332.1|exonuclease 49 0.002 ref|NP_859398.1|hypothetical protein 49 0.003 ref|YP_195253.1|hypothetical protein 49 0.003 ref|NP_932390.1|DNA polymerase, C-terminal fragment 49 0.003 ref|NP_061611.1|orf 21 48 0.004 ref|NP_112716.1|LYS 48 0.005 ref|NP_817358.1|gp20 47 0.006 ref|NP_944360.1|gp51 47 0.006 ref|YP_025040.1|putative transposase A 47 0.006 ref|NP_665964.1|putative plasmid partitioning protein Soj 47 0.008 ref|NP_818340.1|gp39 47 0.008 ref|NP_536425.1|putative helix-turn-helix transcriptional regulator 47 0.008 ref|NP_945111.1|gp80 47 0.008 ref|NP_075485.1|hypothetical protein 47 0.011 ref|NP_803371.1|dnaC 47 0.011 ref|NP_891817.1|RnaseH ribonuclease 47 0.011 ref|YP_006601.1|Gp21 47 0.011 ref|NP_047971.2|gp26 47 0.011 ref|NP_543070.1|putative replication protein DnaC 47 0.011 ref|NP_958645.1|77ORF013 47 0.011 ref|NP_859266.1|hypothetical protein 46 0.014 ref|NP_612900.1|hypothetical protein 46 0.014 ref|NP_859100.1|hypothetical protein 46 0.014 ref|NP_046874.1|putative DNA primase 46 0.014 ref|NP_932562.1|dihydrofolate reductase 46 0.014 ref|NP_663692.1|putative lysin 46 0.019 ref|YP_006507.1|Sit 46 0.019 ref|YP_006930.1|putative Sir2-like protein 46 0.019 ref|NP_835731.1|similar to RNA polymerase ECF-type sigma factor 46 0.019 ref|NP_510917.1|similar to Escherichia coli DnaC 46 0.019 ref|NP_039722.1|predicted 14.5Kd protein 45 0.025 ref|NP_046798.1|Old 45 0.025 ref|NP_835600.1|putative glycosyltransferases 45 0.025 ref|NP_899291.1|Sir2 45 0.025 ref|NP_813764.1|putative DNA polymerase 45 0.042 ref|NP_817999.1|gp26 45 0.042 ref|NP_049850.1|Frd dihydrofolate reductase 45 0.042 ref|NP_944303.1|conserved phage mega protein 45 0.042 ref|YP_006958.1|flap endonuclease 45 0.042 ref|NP_536385.1|conserved hypothetical protein 45 0.042 ref|NP_945059.1|gp28 45 0.042 ref|NP_899249.1|RNaseH ribonuclease 45 0.042 ref|YP_164732.1|orf97 44 0.055 ref|NP_996722.1|lysin 44 0.055 ref|NP_666000.1|putative N4-cytosine methyltransferase 44 0.072 ref|NP_862860.1|gp21 44 0.072 ref|YP_024499.1|putative helicase 44 0.072 ref|NP_958267.1|hypothetical protein 44 0.072 ref|NP_038314.1|ORF13 44 0.094 ref|NP_996598.1|hypothetical protein predicted by GeneMark 44 0.094 ref|YP_195252.1|hypothetical protein 44 0.094 ref|YP_164321.1|hypothetical protein 43 0.12 ref|NP_039720.1|predicted 11.4Kd protein 43 0.12 ref|YP_024964.1|putative prophage repressor protein 43 0.12 ref|NP_046948.1|gp52 43 0.12 ref|NP_061565.1|cI repressor protein 43 0.16 ref|NP_861932.1|Frd dihydrofolate reductase 43 0.16 ref|NP_705631.1|gp04 43 0.16 ref|NP_944371.1|gp63 43 0.16 ref|NP_108682.1|cI2009 43 0.16 ref|NP_996677.1|phage repressor 43 0.16 ref|NP_690646.1|pre-neck appendage protein 43 0.16 ref|NP_817647.1|gp58 42 0.21 ref|NP_891578.1|gp39.2 conserved hypothetical protein 42 0.21 ref|NP_944302.1|conserved phage protein 42 0.21 ref|NP_958300.1|hypothetical protein 42 0.21 ref|NP_108734.1|lysin 42 0.21 ref|NP_858965.1|tail lenght tape measure protein 42 0.27 ref|NP_612996.1|hypothetical protein 42 0.27 ref|NP_803852.1|ORF286 42 0.27 ref|NP_958209.1|gene 33 protein 42 0.27 ref|NP_046569.1|IMPB 42 0.27 ref|NP_795697.1|putative tail protein 42 0.36 ref|YP_164334.1|integrase 42 0.36 ref|NP_817352.1|gp14 42 0.36 ref|NP_818167.1|gp94 42 0.36 ref|NP_861749.1|gp44 clamp loader subunit, DNA polymerase access... 42 0.36 ref|NP_944257.1|putative DnaC 42 0.36 ref|YP_195260.1|hypothetical protein 42 0.36 ref|NP_040602.1|Tail fiber protein 42 0.36 ref|NP_818282.1|gp232 41 0.46 ref|NP_958108.1|gp04 41 0.46 ref|NP_958678.1|Bbp9 41 0.46 ref|NP_996571.1|hypothetical protein predicted by GeneMark 41 0.46 ref|NP_996619.1|hypothetical protein predicted by GeneMark 41 0.46 >ref|NP_932363.1|hypothetical protein Length = 389 Score = 381 bits (978), Expect = e-103 Identities = 209/388 (53%), Positives = 265/388 (68%), Gaps = 5/388 (1%) Frame = -2 Query: 1737892 RDTAVRGAILKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYAEGYPGKRYYGGCEY 1737713 +D V+ I E RQ +V LIASEN VS V++AQGS+ TNKYAEGYPGKRYYGGC Sbjct: 2 QDKVVQSIIEDEAMRQYCEVCLIASENYVSDDVMKAQGSIFTNKYAEGYPGKRYYGGCVK 61 Query: 1737712 ADVIETLALDRIKQLFNAKFANVQPHSGAQANGAVMLALVKPGDTVLGMSLDAGGHLTHG 1737533 AD IE LA++R K+LF+ FANVQPHSG+QAN AV AL+KPGD+VL MSLD GGHLTHG Sbjct: 62 ADEIENLAIERAKELFSCNFANVQPHSGSQANQAVYQALLKPGDSVLAMSLDCGGHLTHG 121 Query: 1737532 AKPAMSGKWFNAVQYGVNRDTMLIDYEQIEELAQQHKPALLIAGFSAYPRALDFARLRAI 1737353 K SGK ++ YGV D + + +E++ L++ G+SAY ++ A I Sbjct: 122 HKANASGKIYDFHHYGVFSDGTININQVVEQIRTIPDLKLVVIGYSAYVGRINEATYAKI 181 Query: 1737352 AD---SVGAKLMVDMAHIAGVIAAGRHQNPVE-HAHVVTSTTHKTLRGPRGGFVLTNDED 1737185 AD S+GAKLMVDMAH AG +AA H NP++ A VVT+TTHKTLRGPRGG +LTND D Sbjct: 182 ADAAHSIGAKLMVDMAHFAGFVAARLHANPLKWGADVVTTTTHKTLRGPRGGLILTNDAD 241 Query: 1737184 IAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALQPGFKTYIDSVLANAQALGEVLKAGGV 1737005 IAKK+NSA+FPG+QGGPL+HVIA KAV FGEAL+ + Y+ V NA + E A G Sbjct: 242 IAKKVNSAIFPGIQGGPLLHVIAAKAVCFGEALREDYVDYMIQVAHNASIMYETFDAAGH 301 Query: 1737004 DLVTGGTDNHLLLVDLRPK-SLKGNQVEQALERAGITCNKNGIPFDTEKPTITSGIRLGT 1736828 LV G T+NH +L++ L G + EQ LE+ GI NKN +P DT P TSGIR+G+ Sbjct: 302 KLV-GFTENHQVLLNTYESFGLTGREAEQLLEKEGIIVNKNMLPNDTRSPVETSGIRIGS 360 Query: 1736827 PAGTTRGFGMSEFREVGRLIVEVLDALR 1736744 PA TTRG+ S+F ++ I+ +L+ + Sbjct: 361 PAMTTRGWVESDFYDITIKIMHILECAK 388 Score = 44.7 bits (104), Expect = 0.042 Identities = 48/168 (28%), Positives = 67/168 (39%), Gaps = 4/168 (2%) Frame = -1 Query: 3348767 ADLAGICDLADRYGALVMVDDSHAVGFVGEHGRGTPEHCGVLSRVDIITGTLGKALGGAS 3348588 A A I D A GA +MVD +H GFV P G D++T T K L G Sbjct: 176 ATYAKIADAAHSIGAKLMVDMAHFAGFVAARLHANPLKWG----ADVVTTTTHKTLRGPR 231 Query: 3348587 GGYVAAR-KEIVELLRQRSRPYLFSNTLTPSIAAASLKVLELLASEEGAQLRARVRENGA 3348411 GG + +I + + P + L IAA ++ E L E+ +V N + Sbjct: 232 GGLILTNDADIAKKVNSAIFPGIQGGPLLHVIAAKAVCFGEAL-REDYVDYMIQVAHNAS 290 Query: 3348410 HFRSKMSALGFTLV--PGEHPIIPVMLGDAQLASKMADALL-KEGVYV 3348276 A G LV H ++ L + A+ LL KEG+ V Sbjct: 291 IMYETFDAAGHKLVGFTENHQVLLNTYESFGLTGREAEQLLEKEGIIV 338 >ref|NP_536383.1|DNA adenine methylase Length = 262 Score = 330 bits (846), Expect = 4e-88 Identities = 151/191 (79%), Positives = 169/191 (88%) Frame = -3 Query: 2170197 MVMPIIPWIGGKRRLADVLIPRFPSHSCYVEVFAGAAALFFMRPPAEVEVLNDVNDELIN 2170018 M PIIPWIGGKRRLAD +IPRFP H CYVEVFAG AAL+FMRPPA VEV+ND+N EL+N Sbjct: 1 MANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVN 60 Query: 2170017 LYRVVQHHLEEFVRQFKWALSSREVFRWLSETPPHTLTDIQRAARFYYLQQNCFGGRVEG 2169838 LYRVVQHHLEEFVRQFKWAL+SR+VF WL T P TLTDIQRAARFYYLQ++CFGG++EG Sbjct: 61 LYRVVQHHLEEFVRQFKWALTSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEG 120 Query: 2169837 RTFGTATTSPPGLNLLRIEETLSAAHLRLSGAYIEKLDWQTCMARYDRPHMCFYLDPPYY 2169658 +TFGTATT+ PGLNLLRIEE LSAAH+RL+ AYIE+LDW TC+ RYDRPH FYLDPPY+ Sbjct: 121 QTFGTATTTVPGLNLLRIEEELSAAHIRLANAYIERLDWATCIDRYDRPHTLFYLDPPYF 180 Query: 2169657 ETEGYGVPFEF 2169625 ETEGYGV F F Sbjct: 181 ETEGYGVAFPF 191 Score = 77.8 bits (190), Expect = 4e-12 Identities = 40/86 (46%), Positives = 52/86 (60%) Frame = -2 Query: 2169667 PVLRDRGLRRAVRIRQYERMAAALRGLQGRAILTLNDHAAFQDLFSGFERERVELPYTVG 2169488 P G A +YE+MA LR ++GRAI++LNDH + +F+GF E V + YT+G Sbjct: 178 PYFETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIG 237 Query: 2169487 GPANTALRGELIIYSWDRAKDPVGLF 2169410 G R ELII+SWD A PVGLF Sbjct: 238 GGKGVE-RRELIIFSWDDAAQPVGLF 262 >ref|NP_945057.1|gp26 Length = 262 Score = 330 bits (846), Expect = 4e-88 Identities = 151/191 (79%), Positives = 169/191 (88%) Frame = -3 Query: 2170197 MVMPIIPWIGGKRRLADVLIPRFPSHSCYVEVFAGAAALFFMRPPAEVEVLNDVNDELIN 2170018 M PIIPWIGGKRRLAD +IPRFP H CYVEVFAG AAL+FMRPPA VEV+ND+N EL+N Sbjct: 1 MANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVN 60 Query: 2170017 LYRVVQHHLEEFVRQFKWALSSREVFRWLSETPPHTLTDIQRAARFYYLQQNCFGGRVEG 2169838 LYRVVQHHLEEFVRQFKWAL+SR+VF WL T P TLTDIQRAARFYYLQ++CFGG++EG Sbjct: 61 LYRVVQHHLEEFVRQFKWALTSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEG 120 Query: 2169837 RTFGTATTSPPGLNLLRIEETLSAAHLRLSGAYIEKLDWQTCMARYDRPHMCFYLDPPYY 2169658 +TFGTATT+ PGLNLLRIEE LSAAH+RL+ AYIE+LDW TC+ RYDRPH FYLDPPY+ Sbjct: 121 QTFGTATTTVPGLNLLRIEEELSAAHIRLANAYIERLDWATCIDRYDRPHTLFYLDPPYF 180 Query: 2169657 ETEGYGVPFEF 2169625 ETEGYGV F F Sbjct: 181 ETEGYGVAFPF 191 Score = 77.8 bits (190), Expect = 4e-12 Identities = 40/86 (46%), Positives = 52/86 (60%) Frame = -2 Query: 2169667 PVLRDRGLRRAVRIRQYERMAAALRGLQGRAILTLNDHAAFQDLFSGFERERVELPYTVG 2169488 P G A +YE+MA LR ++GRAI++LNDH + +F+GF E V + YT+G Sbjct: 178 PYFETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIG 237 Query: 2169487 GPANTALRGELIIYSWDRAKDPVGLF 2169410 G R ELII+SWD A PVGLF Sbjct: 238 GGKGVE-RRELIIFSWDDAAQPVGLF 262 >ref|YP_164085.1|Dam modification methylase Length = 264 Score = 322 bits (825), Expect = 1e-85 Identities = 150/189 (79%), Positives = 167/189 (88%), Gaps = 1/189 (0%) Frame = -3 Query: 2170188 PIIPWIGGKRRLADVLIPRFPSHSCYVEVFAGAAALFFMRP-PAEVEVLNDVNDELINLY 2170012 PIIPWIGGKRRLAD + P FP HSCYVE FAG AALFF+RP PA+VEVLND+N +L+NLY Sbjct: 5 PIIPWIGGKRRLADRIFPLFPRHSCYVEPFAGGAALFFLRPVPADVEVLNDINGDLVNLY 64 Query: 2170011 RVVQHHLEEFVRQFKWALSSREVFRWLSETPPHTLTDIQRAARFYYLQQNCFGGRVEGRT 2169832 RVVQHHLEEFVRQFKWALSSR+VF+WL ET P TLTDIQRAARFYYLQQ+ FGGRV+G++ Sbjct: 65 RVVQHHLEEFVRQFKWALSSRQVFKWLQETRPETLTDIQRAARFYYLQQSAFGGRVDGQS 124 Query: 2169831 FGTATTSPPGLNLLRIEETLSAAHLRLSGAYIEKLDWQTCMARYDRPHMCFYLDPPYYET 2169652 +GTATTSPPGLNLLR+EETLSAAHLRLS YIE L WQ C+ RYDR H FY+DPPY+ET Sbjct: 125 YGTATTSPPGLNLLRLEETLSAAHLRLSNTYIEHLSWQDCLRRYDREHTLFYMDPPYWET 184 Query: 2169651 EGYGVPFEF 2169625 EGYGVPF F Sbjct: 185 EGYGVPFGF 193 Score = 70.5 bits (171), Expect = 7e-10 Identities = 32/71 (45%), Positives = 48/71 (67%) Frame = -2 Query: 2169622 QYERMAAALRGLQGRAILTLNDHAAFQDLFSGFERERVELPYTVGGPANTALRGELIIYS 2169443 QY+ MA R L+G+AI++LNDH ++ F+ F E ++ YTVGG +A R E++I+S Sbjct: 195 QYQEMAVMFRQLKGKAIISLNDHPEIRECFASFHIESTDITYTVGGGQGSAAR-EVLIFS 253 Query: 2169442 WDRAKDPVGLF 2169410 WD + +P GLF Sbjct: 254 WDLSAEPAGLF 264 >ref|NP_899510.1|nicotinamide phosphoribosyl transferase Length = 497 Score = 309 bits (791), Expect = 9e-82 Identities = 181/423 (42%), Positives = 251/423 (59%), Gaps = 16/423 (3%) Frame = +1 Query: 1297333 NPILNTDSYKASHYLQYPPEASAMFSYIESRGGRYDRTLFFGLQMLIKEYLCRPVTPAM- 1297509 N + TDSYK SH+ Q+P Y+ESRGG++D+ + G+ Y+CR + + Sbjct: 7 NIAIATDSYKVSHWSQFPRGLEYSQYYVESRGGKFDKIMVDGMA-----YMCRILEKGVS 61 Query: 1297510 ---IGQAKAFFTAH--GEPFNEAGWRHVVEQYGGYLPVRIRAVPEGSVVPTHNVLVTVEC 1297674 + +AK F H E FN+ GW +V + G LP++IRAV EG+VVP + ++T+E Sbjct: 62 MNDVKRAKRLFKKHFGSEVFNDKGWDIIVNELKGKLPIKIRAVKEGTVVPVKHPILTIEN 121 Query: 1297675 DDPQVFWLASYLETMLLR-VWYPITVATQSWHLRKTIRGYLLKSSDD---LAQLPFKLHD 1297842 DP+ WL YLET +LR +WYP TVAT S+ ++K IR ++ K+ DD Q PFKLHD Sbjct: 122 TDPRFGWLPGYLETFILRALWYPTTVATISFEVKKIIRQFMKKTVDDERIAEQEPFKLHD 181 Query: 1297843 FGARXXXXXXXXXXXXXXHLVSFMGSDTVLGVVAANHYYNETM----AAFSVPAAEHSTI 1298010 FG+R HL +F+G+DTV +VA Y E + A FS+PA EHST Sbjct: 182 FGSRGVSSGESAAIGGSAHLKNFLGTDTVEALVAVEELYAEDVEDFIAGFSIPAREHSTT 241 Query: 1298011 TSWGRERETDAFRNMIAQFGKPGAIVSVVSDSYDLFAAL-RVWGTELKQAVLDSGGMLVI 1298187 T + E AF N I Q+G A+ + V DSYD AA+ RV K+ ++ GG V Sbjct: 242 TIYKEAGEDQAFLNSIEQWG--AALYACVMDSYDYEAAMNRVSTGRFKELIISKGGTFVA 299 Query: 1298188 RPDSGDPRTIVLQTMRALEASFGSAVNGKGRRVLN-NVRVIQGDGVNPDSIEAILAALDQ 1298364 RPDSG P +V++ + L + G +N KG +VL+ + R+IQGDGVN + I IL+ ++ Sbjct: 300 RPDSGVPVDVVMKGLEILGKNVGYTINSKGYKVLHPSYRIIQGDGVNIEEIRRILSYMES 359 Query: 1298365 AGFAADNIVFGMGGALLQQINRDTQRFAMKCSAIRLGDEWHDVLKDPITDTAKRSMKGRL 1298544 G++A+NI FGMGG LLQQ++RDTQRFAMK SA + E+ V K P TD K S G L Sbjct: 360 KGWSAENIAFGMGGGLLQQLDRDTQRFAMKMSAAIINGEYVSVFKMPKTDPTKASKAGFL 419 Query: 1298545 TLL 1298553 L+ Sbjct: 420 DLI 422 >ref|NP_932427.1|hypothetical protein Length = 484 Score = 281 bits (718), Expect = 3e-73 Identities = 173/420 (41%), Positives = 238/420 (56%), Gaps = 16/420 (3%) Frame = +1 Query: 1297339 ILNTDSYKASHYLQYPPEASAMFSYIESRGGRYDRTLFFGLQML---IKEYLCRPVTPAM 1297509 I TDSYK +H+ Q P + Y+E+RGG++D + G++ + ++E + M Sbjct: 7 IAMTDSYKITHWNQMPDGTDEVVFYVEARGGKFDNIVIGGIEYMMTKLQEIITNEDVAEM 66 Query: 1297510 IGQAKAFFTAHGEPFNEAGWRHVV--EQYGGYLPVRIRAVPEGSVVPTHNVLVTVECDDP 1297683 +KA F + FN GW VV +Q G LP++I AVPEG+VVP NV++TV C P Sbjct: 67 HEMSKAHFGQ--DVFNRKGWDEVVAYQQKHGCLPIQIDAVPEGTVVPVKNVVLTVRCKAP 124 Query: 1297684 QVFWLASYLETMLLR-VWYPITVATQSWHLRKTIRGYLLKSSDDLAQLP-------FKLH 1297839 W+A + E ++LR VWY TVAT S IR +L+ ++D + P +LH Sbjct: 125 YT-WVAGWFEPVILRAVWYTSTVATLSRECIAMIRKHLIDTTDLVVDSPEFNFVLMTRLH 183 Query: 1297840 DFGARXXXXXXXXXXXXXXHLVSFMGSDTVLGVVAANHYYNETMAAFSVPAAEHSTITSW 1298019 DFG+R HL + MG+DT + A H Y MA SVPA EHST+TSW Sbjct: 184 DFGSRGVSSGESAALGGMAHLYNSMGTDTFESLYLAKHLYGAKMAGISVPAREHSTVTSW 243 Query: 1298020 GRERETDAFRNMIAQFGKPGAIVSVVSDSYDLFAALR-VWGTELKQAVLDSGGMLVIRPD 1298196 G ERET+A+ N + FG SVV DS D A+R + G K V+ GG L++RPD Sbjct: 244 GAERETEAYMNSVRLFGT--GAYSVVYDSTDFKRAVREIEG--YKDEVIAKGGTLIVRPD 299 Query: 1298197 SGDPRTIVLQTMRALEASFGSAVNGKGRRVLN-NVRVIQGDGVN-PDSIEAILAALDQAG 1298370 SGD + + L FG N KG +VLN + R+IQGDG++ P+ I+ +L + G Sbjct: 300 SGDMFDNITYALETLGEIFGYETNSKGFKVLNKHCRIIQGDGIDGPEIIDEVLTMMADNG 359 Query: 1298371 FAADNIVFGMGGALLQQINRDTQRFAMKCSAIRLGDEWHDVLKDPITDTAKRSMKGRLTL 1298550 +AA+NI FGMGG LLQ +NRDT ++AMK SAI++ W+DV K P K S KG+L L Sbjct: 360 WAAENIAFGMGGGLLQMVNRDTCKWAMKMSAIKINGVWYDVFKCPKGAEWKASKKGQLGL 419 >ref|NP_944261.1|putative TnpA transposase Length = 482 Score = 255 bits (652), Expect = 1e-65 Identities = 143/387 (36%), Positives = 222/387 (57%), Gaps = 5/387 (1%) Frame = -2 Query: 3228376 NILHLPQYQVLGCKSTDDEMHFQVDVPD-PIACEECGVQGEFVRFGKRDVPYRDLPIHGK 3228200 +IL LP + ++ DE D P AC++CGV G + G + + +RD PI G+ Sbjct: 3 DILDLPGWTPTATRTEGDEYIISADYTVLPEACQKCGVIGRVYKHGPKMIIFRDSPIRGR 62 Query: 3228199 RVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLD 3228020 V++ +R+ CR C TF L + RMT R +Y+E++ +T +A G D Sbjct: 63 PVSIEANAQRFRCRDCGGTFIQPLGGIHPATRMTARCVQYIEEQCLRDTFTRIAEHVGCD 122 Query: 3228019 EKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQD 3227840 +KTVR + + L + P LGIDE ++ + RCI+T++ R +D+L R + Sbjct: 123 DKTVRTLAGDYIDRLNAEYTPWLPEWLGIDETQIDGKLRCIITDVVNRVPIDMLPDRDKP 182 Query: 3227839 VVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKG 3227660 +VT +L + K+R V+ +++DMW PY+ A ++V P +VVDKFH+VRMAN A++ +R Sbjct: 183 LVTAWLHQFKERGGVKGLAIDMWKPYKDAAQSVFPGLPVVVDKFHLVRMANRAMDDIRIT 242 Query: 3227659 LRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWD 3227480 L K+ + + R + +L R + ++ R ++ W P + AY KE FY I+D Sbjct: 243 LAKDQEKAVGRDWMRRKALLRMRYKNLDEQGRFNLQMWLDNEPHVAIAYGLKEAFYDIYD 302 Query: 3227479 ATTRLQAEAALDEWIATIP----KGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTE 3227312 A +R +AE LD W ++P KG+K + L+ + NWREE + YF D P++N YTE Sbjct: 303 APSRAEAEERLDAWRKSVPADMRKGKKS-FMPLLTSTRNWREEMLAYF--DHPISNGYTE 359 Query: 3227311 SINRLAKDKNREGRGYSFEVMRARMLY 3227231 ++N +AK NR GRGYSFEV+RAR+LY Sbjct: 360 ALNGVAKVINRAGRGYSFEVLRARLLY 386 Score = 255 bits (652), Expect = 1e-65 Identities = 143/387 (36%), Positives = 222/387 (57%), Gaps = 5/387 (1%) Frame = +3 Query: 1761909 NILHLPQYQVLGCKSTDDEMHFQVDVPD-PIACEECGVQGEFVRFGKRDVPYRDLPIHGK 1762085 +IL LP + ++ DE D P AC++CGV G + G + + +RD PI G+ Sbjct: 3 DILDLPGWTPTATRTEGDEYIISADYTVLPEACQKCGVIGRVYKHGPKMIIFRDSPIRGR 62 Query: 1762086 RVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLD 1762265 V++ +R+ CR C TF L + RMT R +Y+E++ +T +A G D Sbjct: 63 PVSIEANAQRFRCRDCGGTFIQPLGGIHPATRMTARCVQYIEEQCLRDTFTRIAEHVGCD 122 Query: 1762266 EKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQD 1762445 +KTVR + + L + P LGIDE ++ + RCI+T++ R +D+L R + Sbjct: 123 DKTVRTLAGDYIDRLNAEYTPWLPEWLGIDETQIDGKLRCIITDVVNRVPIDMLPDRDKP 182 Query: 1762446 VVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKG 1762625 +VT +L + K+R V+ +++DMW PY+ A ++V P +VVDKFH+VRMAN A++ +R Sbjct: 183 LVTAWLHQFKERGGVKGLAIDMWKPYKDAAQSVFPGLPVVVDKFHLVRMANRAMDDIRIT 242 Query: 1762626 LRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWD 1762805 L K+ + + R + +L R + ++ R ++ W P + AY KE FY I+D Sbjct: 243 LAKDQEKAVGRDWMRRKALLRMRYKNLDEQGRFNLQMWLDNEPHVAIAYGLKEAFYDIYD 302 Query: 1762806 ATTRLQAEAALDEWIATIP----KGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTE 1762973 A +R +AE LD W ++P KG+K + L+ + NWREE + YF D P++N YTE Sbjct: 303 APSRAEAEERLDAWRKSVPADMRKGKKS-FMPLLTSTRNWREEMLAYF--DHPISNGYTE 359 Query: 1762974 SINRLAKDKNREGRGYSFEVMRARMLY 1763054 ++N +AK NR GRGYSFEV+RAR+LY Sbjct: 360 ALNGVAKVINRAGRGYSFEVLRARLLY 386 >ref|NP_612994.1|hypothetical protein Length = 348 Score = 254 bits (649), Expect = 3e-65 Identities = 127/290 (43%), Positives = 191/290 (65%), Gaps = 4/290 (1%) Frame = +3 Query: 107823 QAQLCFKLGDEIGSEGKNSAVFRARDLQLDAELAIKQVKKSSISDTADYFREASILYLGD 108002 +A + F+ ++ +G S V+ A D L +L IK+++K ++ DYF EA +LY Sbjct: 7 RADVEFEWISDLEEQGCFSKVYLAHDRHLAHDLVIKEIEKKENTNHDDYFNEARLLYKHA 66 Query: 108003 HTNVVPIHYACEDADHVYLAMPYYPNGSLNRLIEQRFLTVREVVRYGIQFLSGLHNIHSK 108182 H N+V + YA + ++Y+AMP+Y NGSLN+L+++ LT RE++RY IQFLSGL++IHSK Sbjct: 67 HPNIVQVQYAAQCESNIYIAMPFYHNGSLNQLMKKNNLTSREIIRYSIQFLSGLYHIHSK 126 Query: 108183 GLIHFDIKPDNILLSSRNEALLSDFGLARRMNADGTAEPPLSYWKNIPPE--ALATSEHT 108356 GL+HFDIKP+NI++S+RNEA+LSDFGL++ +N + A P Y ++PPE +L+T+++ Sbjct: 127 GLMHFDIKPNNIMISNRNEAMLSDFGLSQLVNEESRAAPEFGYHFHVPPEYFSLSTNDYN 186 Query: 108357 VGYDIYQVGLTLYRMCCGNDTFYEQLKQFKTFADFGAAVNKGLFPDRSTFPAHIPNALRT 108536 YDIYQ GLT+YRMC G+D F + F T ++ G +P + +P HI L T Sbjct: 187 FTYDIYQAGLTIYRMCVGHDNFERERSAFSTIEQLRESIINGCYPLKE-YPPHIHKKLIT 245 Query: 108537 LVKKCINVDVDARYGAVIEVSNALGGIEGNELDWQYEVY--PDGTREWTK 108680 +V KCI+VD + RY +V++V N L I LDW+ ++ +GT EW K Sbjct: 246 IVNKCIHVDPNERYQSVLDVLNDLSAISDGVLDWRLQMTKPTNGTCEWQK 295 Score = 55.5 bits (132), Expect = 2e-05 Identities = 44/163 (26%), Positives = 71/163 (43%) Frame = +3 Query: 493980 EARKAQVLAHRNIITVYDFDRDGPIVYLTMEYLSGKPLSQLLRTPGYQGMPVRAALPIVR 494159 EAR AH NI+ V + +Y+ M + L+QL++ + R + Sbjct: 58 EARLLYKHAHPNIVQVQYAAQCESNIYIAMPFYHNGSLNQLMKK---NNLTSREIIRYSI 114 Query: 494160 GMSSALAYAHERGFVHCDFKPANVFLTTNAEVKVIDFGIARVFQRPEEESDATVFDPGSL 494339 S L + H +G +H D KP N+ ++ E + DFG++++ EE A F G Sbjct: 115 QFLSGLYHIHSKGLMHFDIKPNNIMISNRNEAMLSDFGLSQLVN--EESRAAPEF--GYH 170 Query: 494340 GALTPAYASPEMIEHREPDPRDDIYALGCITYELLTGHHPFDR 494468 + P Y S + + + DIY G Y + GH F+R Sbjct: 171 FHVPPEYFS---LSTNDYNFTYDIYQAGLTIYRMCVGHDNFER 210 >ref|NP_049482.1|serine Length = 348 Score = 254 bits (649), Expect = 3e-65 Identities = 127/290 (43%), Positives = 191/290 (65%), Gaps = 4/290 (1%) Frame = +3 Query: 107823 QAQLCFKLGDEIGSEGKNSAVFRARDLQLDAELAIKQVKKSSISDTADYFREASILYLGD 108002 +A + F+ ++ +G S V+ A D L +L IK+++K ++ DYF EA +LY Sbjct: 7 RADVEFEWISDLEEQGCFSKVYLAHDRHLAHDLVIKEIEKKENTNHDDYFNEARLLYKHA 66 Query: 108003 HTNVVPIHYACEDADHVYLAMPYYPNGSLNRLIEQRFLTVREVVRYGIQFLSGLHNIHSK 108182 H N+V + YA + ++Y+AMP+Y NGSLN+L+++ LT RE++RY IQFLSGL++IHSK Sbjct: 67 HPNIVQVQYAAQCESNIYIAMPFYHNGSLNQLMKKNNLTSREIIRYSIQFLSGLYHIHSK 126 Query: 108183 GLIHFDIKPDNILLSSRNEALLSDFGLARRMNADGTAEPPLSYWKNIPPE--ALATSEHT 108356 GL+HFDIKP+NI++S+RNEA+LSDFGL++ +N + A P Y ++PPE +L+T+++ Sbjct: 127 GLMHFDIKPNNIMISNRNEAMLSDFGLSQLVNEESRAAPEFGYHFHVPPEYFSLSTNDYN 186 Query: 108357 VGYDIYQVGLTLYRMCCGNDTFYEQLKQFKTFADFGAAVNKGLFPDRSTFPAHIPNALRT 108536 YDIYQ GLT+YRMC G+D F + F T ++ G +P + +P HI L T Sbjct: 187 FTYDIYQAGLTIYRMCVGHDNFERERSAFSTIEQLRESIINGCYPLKE-YPPHIHKKLIT 245 Query: 108537 LVKKCINVDVDARYGAVIEVSNALGGIEGNELDWQYEVY--PDGTREWTK 108680 +V KCI+VD + RY +V++V N L I LDW+ ++ +GT EW K Sbjct: 246 IVNKCIHVDPNERYQSVLDVLNDLSAISDGVLDWRLQMTKPTNGTCEWQK 295 Score = 55.5 bits (132), Expect = 2e-05 Identities = 44/163 (26%), Positives = 71/163 (43%) Frame = +3 Query: 493980 EARKAQVLAHRNIITVYDFDRDGPIVYLTMEYLSGKPLSQLLRTPGYQGMPVRAALPIVR 494159 EAR AH NI+ V + +Y+ M + L+QL++ + R + Sbjct: 58 EARLLYKHAHPNIVQVQYAAQCESNIYIAMPFYHNGSLNQLMKK---NNLTSREIIRYSI 114 Query: 494160 GMSSALAYAHERGFVHCDFKPANVFLTTNAEVKVIDFGIARVFQRPEEESDATVFDPGSL 494339 S L + H +G +H D KP N+ ++ E + DFG++++ EE A F G Sbjct: 115 QFLSGLYHIHSKGLMHFDIKPNNIMISNRNEAMLSDFGLSQLVN--EESRAAPEF--GYH 170 Query: 494340 GALTPAYASPEMIEHREPDPRDDIYALGCITYELLTGHHPFDR 494468 + P Y S + + + DIY G Y + GH F+R Sbjct: 171 FHVPPEYFS---LSTNDYNFTYDIYQAGLTIYRMCVGHDNFER 210 >ref|NP_944004.1|hypothetical protein Length = 481 Score = 243 bits (620), Expect = 6e-62 Identities = 161/441 (36%), Positives = 241/441 (54%), Gaps = 20/441 (4%) Frame = +1 Query: 1297330 SNPILNTDSYKASHYLQYPPEASAMFSYIESRGGRYDRTLFFGLQMLIKEYLCRPVTPAM 1297509 SN +TDSYK +H Q+P A Y E R D + GL + + L + +T A Sbjct: 6 SNLCASTDSYKITHPWQFPQGTDAASFYAEPRVD--DDVMLSGLHFVAR-VLEQGITVAD 62 Query: 1297510 IGQAKAFFTAH--GEPFNEAGWRHVVEQYGGYLPVRIRAVPEGSVVPTHNVLVTVECDDP 1297683 + +A F +H + F W + + GG LPV + V +G V+P N + VE P Sbjct: 63 VTRANMLFKSHFGRDVFAYDMWMKIATERGGKLPVNMYGVKDGQVIPGRNATMVVETFGP 122 Query: 1297684 QVFWLASYLETMLLRV-WYPITVATQSWHLRKTIRGYLLKSSDDLAQ-----LPFKLHDF 1297845 + F + +LET +LR WYP +VAT S+ ++K ++ YL ++SD L +LHDF Sbjct: 123 E-FSVGGHLETFVLRGHWYPSSVATLSFKIKKLVKKYLKETSDLTGADFDFVLKTRLHDF 181 Query: 1297846 GARXXXXXXXXXXXXXXHLVSFMGSDTVLGVVAANHYYN---ETMAAFSVPAAEHSTITS 1298016 GAR HL++F+G+DTV ++ A YN + S+PA EHST Sbjct: 182 GARGATCEQAAKLGGLAHLINFIGTDTVEALIMAQDIYNLAHDIAVGISIPAREHSTTIC 241 Query: 1298017 WGRE------RETDAFRNMIAQFGKPGAIVSVVSDSYDLFAAL-RVWGTELKQAVLDSGG 1298175 +G E +E +AF N I Q+G + ++V+DS D +A+ R+ E K+ +L GG Sbjct: 242 YGDEGLLTPEQEDEAFWNSIRQWGD--GVYAIVADSIDYKSAVDRLTTGEFKKEILARGG 299 Query: 1298176 MLVIRPDSGDPRTIVLQTMRALEASFGSAVNGKGRRVLN-NVRVIQGDGVNPDS-IEAIL 1298349 VIRPDSGD + + + + G VN KG +VL+ + RVIQGDG++ D IEA L Sbjct: 300 TCVIRPDSGDMFDNIGYALETIAKNVGFTVNSKGYKVLHGSYRVIQGDGLSSDKDIEACL 359 Query: 1298350 AALDQAGFAADNIVFGMGGALLQQINRDTQRFAMKCSAIRLGDEWHDVLKDPITDTAKRS 1298529 + + G++ +N+ FGMGG LLQ+ +RDTQ++A KCSAIR+ +W V K+P K S Sbjct: 360 KFIKELGYSVENVAFGMGGGLLQKCDRDTQKWAYKCSAIRVNGKWRGVRKNPKDAAWKAS 419 Query: 1298530 MKGRLTLLVNRHTGEYRTTTL 1298592 GR+ L+ + G+Y+T + Sbjct: 420 KAGRMRLI--KIDGQYKTVNV 438 >ref|NP_945090.1|gp59 Length = 429 Score = 235 bits (600), Expect = 1e-59 Identities = 141/421 (33%), Positives = 219/421 (52%), Gaps = 4/421 (0%) Frame = -2 Query: 2873029 DASNTLSPAMVRRAIFASVLGNGLEWFDFLIYGYFAKIIAQVFFPGGGGFVSIMLTLATF 2872850 +A+ + S RRA+ A ++GNG EWFDF+ Y +F+ IIA++FFP +S++L+++T Sbjct: 9 EAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTI 68 Query: 2872849 AVGFIVRPIGGILLGIYADRAGRRKALSLLIISMAASTLLMGLTPGYASIGIXXXXXXXX 2872670 VGF +RPIGGI++G AD+ GRR AL++ I M A T ++G P Y G+ Sbjct: 69 GVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVV 128 Query: 2872669 XXXXXXLSVGGQFATASAMLVEYAPPHKKMFYGSFNMSAQAFALLLSSGVGYLLTTQLTH 2872490 S GG+ A+A L E P + +Y S+ ++ FA++L+S + + L Sbjct: 129 ARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDE 188 Query: 2872489 EQLVAWGWRXXXXXXXXXXXXXFYIRHRVAES--PEFERLLDHKDKPPRVTIRQFFRDNG 2872316 +Q+ +WGWR YIR R+ + P ERL + P +R F R+ Sbjct: 189 QQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFPADERL--GECAPVVEVVRSFSRE-- 244 Query: 2872315 DAAICAMGVIIIGAATNYVWHSYLSVYVERQLHLPLSTALLGAFVSGVLNLFLFPLSGKL 2872136 A+ G+++ +YV Y+ Y + L LP ST + V + LF+ PL G L Sbjct: 245 --ALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHL 302 Query: 2872135 ADRYGAYKLFYPIVIAWMVCVYPLYHFVVTNPTPG--HLFIAQMIATVFLAAMSGAHPGM 2871962 +D +G ++ +V YPL F + N PG L + Q++ + +A+ G Sbjct: 303 SDLFGRRWFLAGALLVAIVAAYPL--FAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAA 360 Query: 2871961 LATLFPVRSRSAGVALSYNIAVTLFGGMAPLTITGLTRVTGSSLTPAFYLIFAGFVSLAM 2871782 L+ +FP S G+++SYN+AV FGG + IT T ++L PAFY+I A VSL Sbjct: 361 LSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLIS 420 Query: 2871781 V 2871779 V Sbjct: 421 V 421 Score = 218 bits (554), Expect = 3e-54 Identities = 137/402 (34%), Positives = 201/402 (50%), Gaps = 2/402 (0%) Frame = -3 Query: 2113332 RAMATPDKQESPVRTILRVTSGNFLEMYDFSVYGFYAVSISHALFPRGNEFVSLMLSLAT 2113153 R A ++ R ++ V GN E +DF Y F++V I+ FP ++ +SL+LS++T Sbjct: 8 REAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVST 67 Query: 2113152 FGVGFLMRPIGALVLGSYIDXXXXXXXXXXXXXXXXXXXXMITFTPGYQTIGMAAPVIVV 2112973 GVGF MRPIG +V+G D MI F P Y+ G+ AP+++V Sbjct: 68 IGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIV 127 Query: 2112972 LGRLLQGFSAGAELGGVSVYLAEIAPPGKRGXXXXXXXXXXXXXXXXXXVLGVALRWQLT 2112793 + RLLQGFSAG E+GG + YL E P + G VL V + L Sbjct: 128 VARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLD 187 Query: 2112792 PQQMDSWGWRIPFVIGCLIIPVLFTIRRRLRET--EAFEKRTRHPSTREIFTSLSVNARR 2112619 QQ++SWGWRIPF++G + PV IR RL + A E+ E+ S S A Sbjct: 188 EQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFPADERLGECAPVVEVVRSFSREA-- 245 Query: 2112618 ITGAIMMVTLTAVMFNLITAYTPTFGSRVLHLPELDSFAVAMAVGVVNFAMLPIVGALSD 2112439 + G ++V T + L+ Y PT+ S+VL LP F + + + P++G LSD Sbjct: 246 LVGFGLVVFWTVCSYVLLF-YIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSD 304 Query: 2112438 RIGRRPVLLVCAALVILTAYPLMLWLVQAPSFARLLAVEVWYAMIYGSWQAGMVVALTEL 2112259 GRR L + I+ AYPL L AP LL +V + ++ S++ ++ AL+++ Sbjct: 305 LFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDM 364 Query: 2112258 MPAHIRGTGFSLVWSLAQAIFGGFTPVICTVLIHMTGNRAMP 2112133 P + TG S+ ++LA FGGF+ I T I T N P Sbjct: 365 FPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAP 406 Score = 216 bits (549), Expect = 1e-53 Identities = 135/408 (33%), Positives = 199/408 (48%), Gaps = 5/408 (1%) Frame = -2 Query: 2514778 TVAGKAGPLSRAELGR-IVAAIVIGNGFVAYDFTVYSFAAVAIGNLFFPSHDPASSLLLS 2514602 T A +A P + ++ R V A+++GNGF +DF YSF +V I LFFPS D SLLLS Sbjct: 5 TYAREAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLS 64 Query: 2514601 LATFGAGFVMRPLGAIMIGHLADSRGRKAGLTASLTLMTLGTWLIACLPGYASIGPAATV 2514422 ++T G GF MRP+G I+IG +AD GR+A LT ++ LMT GT +I P Y G A + Sbjct: 65 VSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPL 124 Query: 2514421 LMVLARLMQGLAAGGEIGPASASLMESAGYRHRCFMVSWRXXXXXXXXXXXXXXXXXXXX 2514242 ++V+ARL+QG +AGGE+G A+A L E + SW Sbjct: 125 MIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVK 184 Query: 2514241 XXSPAAMHAWGWRIPFVLGGLIGPVGWYLXXXXXXXXXXXXXRLNPRRLFAE----HTRP 2514074 + +WGWRIPF+LG +GPVG Y+ RL E +R Sbjct: 185 CLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFPADERLGECAPVVEVVRSFSRE 244 Query: 2514073 LVCGLLMMAAPSVSIYVTVFYMPAYLVRTLHRPPTISLLTACLSGFVILVVTPLIGLAAD 2513894 + G ++ +V YV +FY+P Y + L P + + + ++L VTPLIG +D Sbjct: 245 ALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSD 304 Query: 2513893 RLASRKTLQYXXXXXXXXXXXXXXXALTHGAGNLVSLVIITAYVALAVNNAGAGSVLMME 2513714 L R+ L G LV + + + G + + Sbjct: 305 -LFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSD 363 Query: 2513713 AFPAHRRAAGLSVIYSFGVVLFGGFSPFLVTWLINRTGDPMVPAWYLM 2513570 FP + G+S+ Y+ V+ FGGFS ++TW I T + + PA+Y++ Sbjct: 364 MFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVI 411 Score = 194 bits (494), Expect = 3e-47 Identities = 125/419 (29%), Positives = 202/419 (48%), Gaps = 3/419 (0%) Frame = +2 Query: 763802 RRVAFASVIGATVEWYDFFLYGVVAGIVFNKLYFPANDPLVSTLLAYSTFAVGFVTRPLG 763981 RR A ++G EW+DF Y + ++ KL+FP+ D +S LL+ ST VGF RP+G Sbjct: 20 RRAVIAVIVGNGFEWFDFISYSFFS-VIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIG 78 Query: 763982 GVIFGHFGDRIGRKSALILTLIIMGISTAGVAFVPTYAQIGIWAPILLLSLRVLQXXXXX 764161 G++ G D++GR++AL +T+ +M TA + F PTY G+ AP++++ R+LQ Sbjct: 79 GIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAG 138 Query: 764162 XXXXXAVLMAYEYAPPAQRGLYASLPQIGLSIGLCLASGMVASLSRLLPEAAFLSWGWRI 764341 A E P + G Y S Q + + LAS + + + L E SWGWRI Sbjct: 139 GEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRI 198 Query: 764342 AFGASLGLVLIGLYIRAKVMETPEFIALKRNRREAKIPFIDMMTRYRGAVVLGMGARYID 764521 F LGL +G+YIR++ + P F A +R A P ++++ + ++G G Sbjct: 199 PFLLGLGLGPVGIYIRSR-LNDPGFPADERLGECA--PVVEVVRSFSREALVGFGLVVFW 255 Query: 764522 GVFFNIFAVFSIGYLTQHISMSRTDALLGVMIAAGVMCFFIPLFGSMSDKLGRARVYFWG 764701 V + + Y ++ + + + + V++ A ++ F PL G +SD GR Sbjct: 256 TVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGA 315 Query: 764702 SLICGVSVFPAFWLIEMQPA-STLLIWAAIVVPFGIFYAMVYGPXXXXXXXXXXXXVRYT 764878 L+ V+ +P F ++ P TLL++ + FG+ A GP V T Sbjct: 316 LLVAIVAAYPLFAMLNAAPGLKTLLVFQVV---FGLVIASYEGPILAALSDMFPDGVLST 372 Query: 764879 GISFVYQFSGIFASGLTPIIAT--ILMRLNGGKPWTVCAYVLFSALISALSVRAIERKR 765049 GIS Y + I G + I T I N P YV+ +A++S +SV + +R Sbjct: 373 GISISYNLAVITFGGFSAAIITWAIATTHNNLAP---AFYVIAAAIVSLISVSLWQPRR 428 Score = 192 bits (487), Expect = 2e-46 Identities = 121/407 (29%), Positives = 202/407 (49%), Gaps = 3/407 (0%) Frame = +1 Query: 2534335 RRAVTTAVLGQVLEWYDFFLYGTAAALVFGRLFFPVGSDPLTGTIAAFGGFTVGFIARPI 2534514 RRAV ++G EW+DF Y + ++ +LFFP D L+ + + VGF RPI Sbjct: 20 RRAVIAVIVGNGFEWFDFISYSFFSVII-AKLFFPSTDDNLS-LLLSVSTIGVGFFMRPI 77 Query: 2534515 GGVLCGHIGDRYGRKTVMMLTLLVMGTATVGMGLLPTYQQIGLAAPVMLVLLRILQGLAA 2534694 GG++ G I D+ GR+ + +T+ +M T +G PTY+ GL AP+M+V+ R+LQG +A Sbjct: 78 GGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSA 137 Query: 2534695 GGEWSGSILLIHENXXXXXXXXXXXWSPCGAAFGFVL-STAAFLLVQTLSPADFHSWGWR 2534871 GGE G+ + E W F +L S A +V+ L SWGWR Sbjct: 138 GGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWR 197 Query: 2534872 VPFLCSAVLVALGLWMRRSVGESAEFAEVKATHRDARMPIVEVLRQFPRQVLTVFGL-RF 2535048 +PFL L +G+++R + + A+ + P+VEV+R F R+ L FGL F Sbjct: 198 IPFLLGLGLGPVGIYIRSRLNDPGFPADERL---GECAPVVEVVRSFSREALVGFGLVVF 254 Query: 2535049 GEGXXXXXXXXXXXXXGQFIGLKSSWVLGGLTVSMLLMIPVSLLMGRLTDRIGRKPVYLA 2535228 + + L SS + V +++ V+ L+G L+D GR+ +LA Sbjct: 255 WTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRR-WFLA 313 Query: 2535229 GALAMVLV-AYPYFALLGSGVLWKVITALVLANSITLGILEGAQPAFISELLPVHLRFSG 2535405 GAL + +V AYP FA+L + K + + + + EG A +S++ P + +G Sbjct: 314 GALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTG 373 Query: 2535406 LGIGREISSVLGGGLSPMVATALLAHYRSAAPVAVYLVVLGLITVLA 2535546 + I ++ + GG S + T +A + A Y++ ++++++ Sbjct: 374 ISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLIS 420 Score = 164 bits (414), Expect = 5e-38 Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 10/409 (2%) Frame = +1 Query: 2488282 IGAVVDWYDFLLYGIVAALVFNAEFFPKVSPAMGTLAAFATFGVGFLFRPLGGFVFGHFG 2488461 +G +W+DF+ Y + ++ FFP + L + +T GVGF RP+GG V G Sbjct: 28 VGNGFEWFDFISYSFFSVIIAKL-FFPSTDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIA 86 Query: 2488462 DRLGRKRMLVLTVMMMGLSTAAIGLLPSFATIGWLAPVLLVTLRAIQGFAVGGEWGGAAL 2488641 D++GR+ L +T+ +M TA IG P++ G AP+++V R +QGF+ GGE GGA Sbjct: 87 DKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGGATA 146 Query: 2488642 MAVESAPEKKKAFXXXXXXXXXXXXXXXXTGLIALISRSMDNASFLSWGWRLPFLFSVVL 2488821 E P ++ + + L I + +D SWGWR+PFL + L Sbjct: 147 YLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLGLGL 206 Query: 2488822 VLIALWIRSSMEE-SKEFVEKVGEHGEHSVRLPIVEALLRHPKAFLLIIALRLAELFTMY 2488998 + ++IRS + + E++GE P+VE + + L+ L + Y Sbjct: 207 GPVGIYIRSRLNDPGFPADERLGECA------PVVEVVRSFSREALVGFGLVVFWTVCSY 260 Query: 2488999 IVTAFALNYSTANLHMPREFFLTIGLLVGA-LSCVTIPCFAALADRFGRRRVYIVGALVG 2489175 ++ + Y++ L +P I +LVGA + P L+D FGRR LV Sbjct: 261 VLLFYIPTYASKVLKLPSSTGF-IAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGALLVA 319 Query: 2489176 MLSAVPFFLALEARS-----TVWIVVFAVMLANIAHDMVVSVQQPMFTELFGTEYRYSGA 2489340 +++A P F L A V+ VVF +++A+ ++ ++ +++F +G Sbjct: 320 IVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAAL-----SDMFPDGVLSTGI 374 Query: 2489341 GVGYQVASVVGGGFTPFIAVALVNFAGGSWH---PVAAYLAVGCLISVL 2489478 + Y +A + GGF + A++ +A + H A Y+ ++S++ Sbjct: 375 SISYNLAVITFGGF----SAAIITWAIATTHNNLAPAFYVIAAAIVSLI 419 Score = 159 bits (401), Expect = 2e-36 Identities = 107/421 (25%), Positives = 187/421 (44%), Gaps = 6/421 (1%) Frame = -2 Query: 1670641 SANARDASFDSLTPSQWRLIILASLGGALEFYDFVVYGVFAQFIGRAFFSMLDPIMSLVL 1670462 S AR+A+ + + + R +I +G E++DF+ Y F+ I + FF D +SL+L Sbjct: 4 STYAREAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLL 63 Query: 1670461 SFAVFAIGYLSRPLGGAVLSWFGDRYGXXXXXXXXXXXXXXXXIGMGLVPTYASWGLAAT 1670282 S + +G+ RP+GG V+ D+ G +G PTY GL A Sbjct: 64 SVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAP 123 Query: 1670281 FTMILLRLVQGFCLGGELPGSITYVVETVP-RRAGFVCGIVFFCVNSGVLLAAAVNLGVH 1670105 +++ RL+QGF GGE+ G+ Y+ E VP R G+ + + ++LA+ + + + Sbjct: 124 LMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIV 183 Query: 1670104 AALTPDDVAAYGWRXXXXXXXXXXXXXFWLRRKLEETPEFAHMKHLASKHPFTELMQEHW 1669925 L + ++GWR ++R +L + P F + L P E+++ Sbjct: 184 KCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLND-PGFPADERLGECAPVVEVVRSFS 242 Query: 1669924 RPVLLGILTTAATAGYNGLLFAHMPAYLDKVLHYDPHEVALGQNVALATASIGILI---I 1669754 R L+G + +L ++P Y KVL + G L ASI + + I Sbjct: 243 REALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPS---STGFIAVLVGASIVLFVTPLI 299 Query: 1669753 GRIGDSMPRRHLMRAGSLLLIVLTMPFYHA--AVSHRMDXXXXXXXXXXXXXXXXGTFAC 1669580 G + D RR + L+ IV P + A G Sbjct: 300 GHLSDLFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILA 359 Query: 1669579 IIADMFPTRVRFSGVALAFNLSFTIFSGTAPLIGTWLIGRTGDLAAPGYFMVACAVLTFV 1669400 ++DMFP V +G+++++NL+ F G + I TW I T + AP ++++A A+++ + Sbjct: 360 ALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLI 419 Query: 1669399 A 1669397 + Sbjct: 420 S 420 Score = 149 bits (375), Expect = 2e-33 Identities = 111/395 (28%), Positives = 176/395 (44%), Gaps = 7/395 (1%) Frame = -2 Query: 957496 EFYDFIIFVFFAPAIGQLFFPSAMPDW--LRQVQTFGIFAAGYLARPLGGIIMAHFGDLF 957323 E++DFI + FF+ I +LFFPS + L V T G+ G+ RP+GGI++ D Sbjct: 33 EWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGV---GFFMRPIGGIVIGGIADKV 89 Query: 957322 GRKRMFTLSVLLMSVPTLMMGLLPTYTSIGVLAPVLLLLFRVMQGAAVGGEVPGAWVFVS 957143 GR+ T+++ LM+ T M+G PTY G+ AP+++++ R++QG + GGE+ GA ++ Sbjct: 90 GRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGGATAYLR 149 Query: 957142 EHVPQRHIGYACXXXXXXXXXXXXXXXXXASAVNRNFAPAEISAYAWRIPFLVGGVFGMF 956963 E VP GY A + + +I ++ WRIPFL+G G Sbjct: 150 ERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLGLGLGPV 209 Query: 956962 SVYLRRWLHETPVFAELKQRKAIAAEVPLKAVLRDHGRAVIVSMLLTWMLSAAIVVVILM 956783 +Y+R L++ A+ + + P+ V+R R +V L + V++ Sbjct: 210 GIYIRSRLNDPGFPAD----ERLGECAPVVEVVRSFSREALVGFGLVVFWTVCSYVLLFY 265 Query: 956782 TPTLLQKQFHIAPATALLANCVATLCLTIGCVLXXXXXXXXXXXXXXXXXGLVLAVTYYV 956603 PT K + +T +A V + L LV V Y Sbjct: 266 IPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGALLVAIVAAYP 325 Query: 956602 MFQQL--ALDTSALVPLYAVTGLFVGVI-GAIPFVMVKAFPPVVRFSGISFSYNVAYAVF 956432 +F L A L+ V GL + G I + FP V +GIS SYN+A F Sbjct: 326 LFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISISYNLAVITF 385 Query: 956431 GGLTP--IAVSLMMKSNPMAAPMYVGAICILGALT 956333 GG + I ++ N +A YV A I+ ++ Sbjct: 386 GGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLIS 420 Score = 93.2 bits (230), Expect = 1e-16 Identities = 94/400 (23%), Positives = 176/400 (44%), Gaps = 4/400 (1%) Frame = +2 Query: 1078565 SIETKRRNAIKGAFFSEFIDMFDIYLPVVVLSPVLGYFQPPHLSTGMETILASLVFITTL 1078744 S +T RR A+ + FD ++ S ++ P + +L+ Sbjct: 15 SSDTHRR-AVIAVIVGNGFEWFD-FISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGF 72 Query: 1078745 LGRPVGSLLFGMIADRIGRRMASIWSVSGFGVVTLLIALLPGYESIGIVSYWLLVLLRFV 1078924 RP+G ++ G IAD++GRR A +++ T +I P Y+ G+ + ++V+ R + Sbjct: 73 FMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLL 132 Query: 1078925 DGIFLGGGYTGAMPLAIEYSKKEQRGFVGGFIISGFPAAYVTINLVAMLMFVLFPLNGMH 1079104 G GG GA E E+ G+ +I + A + +++A+ + + Sbjct: 133 QGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIE 192 Query: 1079105 SPYAQWGWRIPFVXXXXXXXXXXXYYVRKVAESEIWESETADKAAVAEKLPLSDLLRGKS 1079284 S WGWRIPF+ Y+R S + + + E P+ +++R S Sbjct: 193 S----WGWRIPFL--LGLGLGPVGIYIR----SRLNDPGFPADERLGECAPVVEVVRSFS 242 Query: 1079285 GRNLLQVLVMMTGFW-LTQNIITIYLPT--GLLVKTLHLSGFQMTATLMLTYFVLFFSYI 1079455 L+ +++ FW + ++ Y+PT ++K +GF A L+ VLF + + Sbjct: 243 REALVGFGLVV--FWTVCSYVLLFYIPTYASKVLKLPSSTGF--IAVLVGASIVLFVTPL 298 Query: 1079456 GSGLIAQRIGRRRFFVIVGPLIATVGAALLYVLANVDGLSLPAIMALVCVLAVLVTSPWG 1079635 G ++ G RR+F+ L+A V A L+ + N L ++ V +++ S G Sbjct: 299 -IGHLSDLFG-RRWFLAGALLVAIVAAYPLFAMLNA-APGLKTLLVFQVVFGLVIASYEG 355 Query: 1079636 VIVTYINERFVTDVRATGFGVGFSLSVI-IPSFYAFYMNW 1079752 I+ +++ F V +TG + ++L+VI F A + W Sbjct: 356 PILAALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITW 395 Score = 56.6 bits (135), Expect = 1e-05 Identities = 79/361 (21%), Positives = 146/361 (40%), Gaps = 25/361 (6%) Frame = +2 Query: 299009 LTMSSIAMLTSAGFFGMFLGATLGGMLSDKIGRKRALICYVIAYSVFSLANALAPDIP-- 299182 L++S+I + GFF +G + G ++DK+GR+ AL + + + AP Sbjct: 63 LSVSTIGV----GFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDA 118 Query: 299183 ------MLMITRVLTGVGISSATAVVMAYIAELFPAKTRGTWQSWAMVIALMGIPITSWV 299344 M+++ R+L G AY+ E PA+ G + SW I + S + Sbjct: 119 GLGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVL 178 Query: 299345 ARLVVPSGPD------GWRWIFVWGALGIVFLVFTKHFPESPRWLARQGRMEEADRTLSL 299506 A +V + GWR F+ G LG+ P + + R+ + Sbjct: 179 AVFIVKCLDEQQIESWGWRIPFLLG-LGL-----------GPVGIYIRSRLND------- 219 Query: 299507 IEAEVVRTTGPLPEAVAINRPAEVRAPWTSMFKGQYIGRTMTLWAIWIFQTLGFYGFQAW 299686 P A R E AP + + + + + + +F T+ Y + Sbjct: 220 ------------PGFPADERLGEC-APVVEVVR-SFSREALVGFGLVVFWTVCSYVLLFY 265 Query: 299687 VPTLLVQHGITIVHSLTYITLINIGAVPGALIAVF-------LADRFERKFSIAGA--AA 299839 +PT + + S +I ++ GA I +F L+D F R++ +AGA A Sbjct: 266 IPT-YASKVLKLPSSTGFIAVL-----VGASIVLFVTPLIGHLSDLFGRRWFLAGALLVA 319 Query: 299840 LIAVFGLLYGLSFQPVL--IVSFGFLVGMLIQTFAALCYAYTPEQYPTDIRNTGAGFAYG 300013 ++A + L L+ P L ++ F + G++I ++ A + +P + +TG +Y Sbjct: 320 IVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISISYN 379 Query: 300014 M 300016 + Sbjct: 380 L 380 Score = 53.5 bits (127), Expect = 9e-05 Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 22/217 (10%) Frame = -3 Query: 3326637 SILFALFLIGWGL------SFIWGPLADRFGRVKTLAASILIYSVFTGAAAFAHNVWE-- 3326482 S+L ++ IG G + G +AD+ GR L +I + + T FA + Sbjct: 60 SLLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAG 119 Query: 3326481 ------LAAFRLIAGIGVGGEWALAGTYVAESWPEDRRRMGAGYLQTGYYLGFFLAALLN 3326320 + RL+ G GGE A Y+ E P +R ++Q LA++L Sbjct: 120 LGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLA 179 Query: 3326319 YTVGA--------TYGWRAMFLCGLAPALLAIFTVLKVKEPGQWRKATHGIGQTSAPPAR 3326164 + ++GWR FL GL + I+ ++ +PG A +G+ + Sbjct: 180 VFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPG--FPADERLGECA----- 232 Query: 3326163 ARQPLLEIFAPAYRRRTLTSASLVGVAIIGLWAGSVY 3326053 P++E+ R+ + +LVG ++ W Y Sbjct: 233 ---PVVEVV------RSFSREALVGFGLVVFWTVCSY 260 Score = 48.5 bits (114), Expect = 0.003 Identities = 79/381 (20%), Positives = 144/381 (37%), Gaps = 35/381 (9%) Frame = -1 Query: 1088750 LIGGGMFFDAFDNFLAGSVLGALVQQGLSDMHMNALF----ISMSFAGLTLGAWGAGVIG 1088583 ++G G + F ++ SV+ A + +D +++ L I + F +G G I Sbjct: 27 IVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIA 86 Query: 1088582 DRFGRRFSYQFNLLIFGLTSIAAAFAPSM--------TWLIVLRFIMGIGLGAEIVVGYS 1088427 D+ GRR + + + + FAP+ ++V R + G G E+ + Sbjct: 87 DKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGGATA 146 Query: 1088426 TLNEFMPAHARGRFASLLNLITNSSVLVSAACGFLI--------IPHFGWRWMFAIP-GI 1088274 L E +PA G + S + ++++++ I I +GWR F + G+ Sbjct: 147 YLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLGLGL 206 Query: 1088273 GALVIWYLRKKMPESPRWLAAVGRHQEAREVVEKIEAQSLRRDAPLPVAPQEEEPGRLRD 1088094 G + I Y+R ++ + A R E VVE + +S R+A Sbjct: 207 GPVGI-YIRSRLNDP--GFPADERLGECAPVVEVV--RSFSREA---------------- 245 Query: 1088093 LFAARQLSRTLVGISVICISFTAMYAFVAWVPTFLVKQGFDITHSLLITSAMFAGGPAGS 1087914 LVG ++ Y + ++PT+ K L +S F G+ Sbjct: 246 ----------LVGFGLVVFWTVCSYVLLFYIPTYASKV------LKLPSSTGFIAVLVGA 289 Query: 1087913 LISMAI-------ADRIGRKWGLVIFSALGAMIGMAYPYVTHAVTIALVGFGVTTCIYVT 1087755 I + + +D GR+W F A ++ + Y A+ A G V Sbjct: 290 SIVLFVTPLIGHLSDLFGRRW----FLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVV 345 Query: 1087754 SALGVACY-------VTELFP 1087713 L +A Y ++++FP Sbjct: 346 FGLVIASYEGPILAALSDMFP 366 Score = 48.1 bits (113), Expect = 0.004 Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 16/136 (11%) Frame = +1 Query: 196309 IGSGSVGQLIGAFVFPWYAERGGRVKAIALSSGIIGITSIACGFAPTFA--------AFV 196464 IG G + IG V A++ GR A+ ++ ++ + GFAPT+ V Sbjct: 68 IGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIV 127 Query: 196465 VLRVIQGLGLGGELPVAATYINEISRAHGRGRFVLLYEIVFPVGLLASNALGAWIV---- 196632 V R++QG GGE+ A Y+ E A G + + ++ ++ L +IV Sbjct: 128 VARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLD 187 Query: 196633 ----PRFGWQAMYFIG 196668 +GW+ + +G Sbjct: 188 EQQIESWGWRIPFLLG 203 Score = 44.3 bits (103), Expect = 0.055 Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 17/159 (10%) Frame = -1 Query: 1750316 LSSATAGLVASASFFGMVIGAAIAGLLADRFGRRPVFQWSMVLWGLASYLCSTAQSVE-- 1750143 LS +T G+ FF IG + G +AD+ GRR ++ L + + A + + Sbjct: 63 LSVSTIGV----GFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDA 118 Query: 1750142 ------ALIFYRVLLGFGMGMEFPIAQTLLSEFVPAASRGRLIALMDGFWPLGFIAAGVV 1749981 ++ R+L GF G E A L E VPA G + + I A V+ Sbjct: 119 GLGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVL 178 Query: 1749980 SYFV--------LPTFGWRTEFAL-LAIPAVFVLIVRRM 1749891 + F+ + ++GWR F L L + V + I R+ Sbjct: 179 AVFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRL 217 Score = 43.5 bits (101), Expect = 0.094 Identities = 99/446 (22%), Positives = 163/446 (36%), Gaps = 21/446 (4%) Frame = +1 Query: 1009573 KLVVLLSLGFFFELYDLLYSGYVAPGLVKSGLLTATTHGLFGSTGVASFIAALFSGLFIG 1009752 + V+ + +G FE +D + + + + K L +T S I F IG Sbjct: 21 RAVIAVIVGNGFEWFDFISYSFFSVIIAK--LFFPSTDDNLSLLLSVSTIGVGFFMRPIG 78 Query: 1009753 TIACGFLADRFGRRAVFTYSLLWYTAANIVMAFQET--ATGLN------FWRFLAGIGIG 1009908 I G +AD+ GRRA T ++ TA ++ F T GL R L G G Sbjct: 79 GIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAG 138 Query: 1009909 VELVTIGTYISELVPKQIRGRAFACEQA-VGFTAV--PVVAFLSYLLVPRTLLGLDGWRW 1010079 E+ Y+ E VP + G + QA +GF + V+A + + GWR Sbjct: 139 GEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRI 198 Query: 1010080 VVLIGAHGALFVWWIRRALPESPRWLAQQGRLAEADRVMTELEAKVRREYGRELXXXXXX 1010259 L+G +IR L P + A + RL E V+ +V R + RE Sbjct: 199 PFLLGLGLGPVGIYIRSRL-NDPGFPADE-RLGECAPVV-----EVVRSFSREALVGFGL 251 Query: 1010260 XXXXXRGSFRDM-WVPPYRSRTLMMTIFNIFQTVGFYGFANWVPTLLIKQGITITTSLMY 1010436 S+ + ++P Y S+ L + + GF L+ Sbjct: 252 VVFWTVCSYVLLFYIPTYASKVLKLP-----SSTGFIAV------------------LVG 288 Query: 1010437 SSVIALAAPLGPVIGLFIGDRFERKTVIVVMAGVNIVCGLWFSQXXXXXXXXXXXXXXXX 1010616 +S++ PL IG + D F R+ + V IV Sbjct: 289 ASIVLFVTPL---IG-HLSDLFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQV 344 Query: 1010617 XXNIISYSFH----AYQAELFPTSIRARAVGFVY-----SWSRFSAIFTAFLIAAVLKHF 1010769 ++ S+ A +++FP + + + Y ++ FSA + IA H Sbjct: 345 VFGLVIASYEGPILAALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATT--HN 402 Query: 1010770 GTGGVFVFIAGAMLIVMLAIGLMGPR 1010847 F IA A ++ ++++ L PR Sbjct: 403 NLAPAFYVIAAA-IVSLISVSLWQPR 427 Score = 43.5 bits (101), Expect = 0.094 Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 14/134 (10%) Frame = -3 Query: 1378380 VVFGKLADLYGRKPVMLAGIAIFLIGSVLAGFA-------WSMPAMIAF-RLIQGVGAGA 1378225 +V G +AD GR+ + IA+ G+ + GFA P MI RL+QG AG Sbjct: 80 IVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGG 139 Query: 1378224 IQPVTLTIVADLYPAHERGKVQGYLASVWAISAVVGPMVGGFIIHNM------SWAWIFW 1378063 + + PA G ++ + + ++ ++ FI+ + SW W Sbjct: 140 EMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIP 199 Query: 1378062 MNVPIGLASAAGFI 1378021 + +GL +I Sbjct: 200 FLLGLGLGPVGIYI 213 >ref|NP_542569.1|ribonucleotide reductase Length = 805 Score = 234 bits (598), Expect = 2e-59 Identities = 206/720 (28%), Positives = 309/720 (42%), Gaps = 122/720 (16%) Frame = +2 Query: 1871948 QSADDVFKRVARGVAEAEPPALRESVEALFVDNLRHGALGAGRIMSAAGTGIAA-----T 1872112 + ADD+F+RVA VA AE ++ + D H + R M + T + A Sbjct: 56 EGADDLFRRVAENVAGAEEDGDFDT----WADEFEH-QMKTLRFMPNSPTLMNAGTDMNQ 110 Query: 1872113 LINCFVQPVGDAIQGVDEEGLPGIYVALLQAAETMRRGGGVGYNFSAIRPKGARVHTTSS 1872292 L CFV D ++ + E QAA + GGGVGY FS +RPKGA +++T Sbjct: 111 LSACFVIEPRDDMEDIFETAQ--------QAALIFQSGGGVGYAFSHLRPKGAFINSTGG 162 Query: 1872293 SASGPCSYMDVFDASCRTVESAGSRRGAQMAVLDCNHPDLLEFIEAKHSKGRWNNFNVSV 1872472 ASGP S+M VFD +C V+ G RRGAQM +L +HPD+ FI AK ++G + NFN+SV Sbjct: 163 EASGPVSFMRVFDETCNQVKQGGKRRGAQMGILRADHPDIGRFIVAKRNEGEFANFNISV 222 Query: 1872473 GVTDEFMRAVEEDQPWQL----VHRAEPSPAQRAA---------DDVRQR---------E 1872586 TD F+ AV+ + + L EP + + D+ R E Sbjct: 223 ATTDNFIEAVDAQESYTLYDPETDYEEPYTVRELSAHFYSPEYQDNPRDAFDDGEGAVVE 282 Query: 1872587 DGLW----------VYSER-----------------------PAREIWDRIMRSTYDVAE 1872667 + LW +Y ER PA IWD ++ + E Sbjct: 283 ENLWRDYADEIECELYGERVTLREKWEGHEGLRLEVGEPMELPAAFIWDVMIDGAWRNGE 342 Query: 1872668 PGIVFISRMNEDNNLRAVE----TIRATNPCGEQPLPAYGCCNLGPLNLT---------- 1872805 PG+ N ++ E + ATNPC EQ L Y CNLG +NL+ Sbjct: 343 PGLFNFEESNRQHSFDVEEYPEFRMNATNPCAEQMLVEYEACNLGHINLSLMLSEDAPTY 402 Query: 1872806 -RFVIDPFAQIKGR------------KPSFDWDGLAKRTRTQVRFLDNVLDVTLWPLPQQ 1872946 F+ D + + + D++ L + RFLDNV+ + +P+P+ Sbjct: 403 DEFLSDKLEDVASGDLSTREAVEWYFETAVDFNELDRTIEAGTRFLDNVVTQSDFPIPEI 462 Query: 1872947 YEESRAKRRIGVGFTGLGDTLVMLGLRYNSQEGRDFAVGIAQLMRDEAYRASVELARERG 1873126 E R+IG+G G L +G+ Y +Q+ + A + + + AS LA ERG Sbjct: 463 TERVGGMRKIGLGIMGFAQMLYQMGVPYGTQDSYEVARCVMRYIDRRGTWASHRLALERG 522 Query: 1873127 AFPLFDAARYLETGT----FASRLPEDIKQAIRRDGIRNSHLLSIAPTGTVSLAFADNAS 1873294 AF +D ++Y + FA+R D + IRN ++ +IAPTGT S+ N + Sbjct: 523 AFSYWDKSKYADPTEYDEWFAARTGLDPEDWAGGFPIRNHNITTIAPTGTTSM--IGNTT 580 Query: 1873295 NGIEPAFS-WTYTRMKVMADGSRESFDVEDYAYRLYRELGGDV----------------- 1873420 G EPA++ + + G + +DY R E DV Sbjct: 581 GGCEPAYNVANFKNVSEDIQGDDLLVEFDDYFLRTLEENDLDVDAVKEEAETLMRNNEFD 640 Query: 1873421 --------NRLPDYFVSALEMSARDHLDMMAAVQPYVDTSISKTVNVPADYPFEAFESLY 1873576 + + + FV+ ++S+ H M A Q + D+ ISKTVN+P + + Y Sbjct: 641 GVNDLSIPDEIAEIFVTTQDLSSEQHGLMQRAFQEFCDSGISKTVNLPNEATHDDVADAY 700 Query: 1873577 ---LDAWKNG--LKGLATYRPNETLGAVLSVSPPQADDTLTESDLDPLRIAIDHRPKGEL 1873741 LD + G +KGL YR VL+ D + D D L + + KGE+ Sbjct: 701 QLALDEGRRGAVIKGLTVYRDGSRDQQVLTTRVDNNLDDEGDRDDDLLELYL----KGEV 756 >ref|NP_046572.1|ABC transporter Length = 705 Score = 221 bits (563), Expect = 3e-55 Identities = 178/707 (25%), Positives = 317/707 (44%), Gaps = 11/707 (1%) Frame = +1 Query: 507163 KRFALVEQAEEMDCGAACLAMICRHYSIPMTLGKLRELANVTTQGATLDSLARAGESLGF 507342 K++ +Q DCG AC++ I + +++ + L +L +G +L L + +G Sbjct: 5 KKYVHTKQFNSHDCGLACISSILKFHNLNYGIDFLLDLIG-DKEGYSLRDLIVIFKKMGI 63 Query: 507343 TARGVQC----TFDSLRGFDLPFIVHWEGY---HYVVVYGLSKDYVWVADPAVG-FRKMT 507498 R ++ TF++L+ LP I EG HY+ +Y + +Y+ V+DP K+ Sbjct: 64 KTRPLELQENKTFEALKQIKLPCIALLEGEEYGHYITIYEIRNNYLLVSDPDKDKITKIK 123 Query: 507499 VEDFERGWSGTCLLFTGGPNLLQMSAARSPWIRFVGYLTPYKKILGHLFLATFVIQVLGV 507678 EDFE ++ L + + F L K I+ + L + + L V Sbjct: 124 KEDFESKFTNFILEIDKESIPEKEKDQKKHSYFFKDILFRNKLIVFVILLTSLFVVGLAV 183 Query: 507679 IPPLIIQNILDGVIVHQNVSXXXXXXXXXXXANVFSQLMSSIRAYLANFMVRNMDFAMMS 507858 I+ ++D +I + + +R+YL + +D M + Sbjct: 184 AGSFYIKFLVDLIIPRSLRESLITITLIFISMVLIRCIFDFVRSYLIIKLSYKVDKEMSN 243 Query: 507859 QFFKHTLSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFVY 508038 +F LP +FF R+ G++ +RF + I+ F + + VT ++++++ I++ Sbjct: 244 VYFNKVTKLPINFFENREDGEVISRFNDGIYIKDFFSANFVTAIIDIILILGLGVILYRT 303 Query: 508039 NVKMTLVLIAFIIPIMALTAIAT---PKIKGYAREVFTASTESKSFLMEALAGVETIKGM 508209 N ++ + I+PI+ L+ +A +K +++ +S S L+ L + T+ + Sbjct: 304 N---NILFLTIILPILLLSCLAILFFDHLKKKNQKLMEDKAKSTSLLINFLKNMTTVYSL 360 Query: 508210 GIERPVRLRWEKKYAKALEVQYRAHAFNILVGLGSQLLNAATTIAILWVGANLVLAREMT 508389 ++ Y K L + I + L+ + TI ILWVG VL M+ Sbjct: 361 NKTSFFLEKFHLTYDKQLNSTFSVAKAVISNEILKGLIQNSFTIIILWVGTRQVLNDSMS 420 Query: 508390 IGQLIAFNAFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQKPQDLPSRVMLP 508569 +G L+ N +L L ++ + S L A VA R DV++ +Q S L Sbjct: 421 LGTLLFINTLAAFLLSSLDRILSMQSDLQQAHVASIRFFDVVNYPVQQD-----SNENLT 475 Query: 508570 ELQGEISLSGVYFRYGENDSAYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYTP 508749 EL ++ V G + Y++E+I+ + + V I+G SG+GK+T AK L Y Sbjct: 476 ELDFIQNIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKV 535 Query: 508750 TEGKMTIDGYDLGVVDKAYYRAQIGYVMQSNLLFSGTIAENIASGDDAPDRRRIEEVAKM 508929 + + ++G D+ D R +I Y+ ++ LF GTI EN+ G + D+ IE M Sbjct: 536 PDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTIKENLCMG-EIFDQNEIENACIM 594 Query: 508930 ADAHAFISKMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSE 509109 + H FI + Y + E G LS GQ QRL +ARA+ H P++L+ DE+ S +D + Sbjct: 595 SQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNT 654 Query: 509110 SNILGNMHDILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHE 509250 I +H + ++I H + + +K LV I+E E Sbjct: 655 KLIYETLHRM--DCLIILITHNDPSNFKYNKKLVFRNNRIIESSYSE 699 Score = 116 bits (290), Expect = 1e-23 Identities = 132/679 (19%), Positives = 285/679 (41%), Gaps = 19/679 (2%) Frame = +2 Query: 806330 ECGYACLAMVLSHLGRATEVRELSAFRPISANGLSLMDLYDVATEFGLAVQAYRFD---- 806497 +CG AC++ +L + L G SL DL + + G+ + Sbjct: 17 DCGLACISSILKFHNLNYGIDFLLDLIG-DKEGYSLRDLIVIFKKMGIKTRPLELQENKT 75 Query: 806498 VADLPSVKRGSILHFGG---AHFVVFEKCGHGYVQVVDPASGR-RRVSMDTFVASVSGYL 806665 L +K I G H++ + + Y+ V DP + ++ + F + + ++ Sbjct: 76 FEALKQIKLPCIALLEGEEYGHYITIYEIRNNYLLVSDPDKDKITKIKKEDFESKFTNFI 135 Query: 806666 LECSATPAMPRIRAKSQVPGALARVRALNPALRKQLAKVMFVALGSQFAILAMPYLGNL- 806842 LE ++P + K Q + L R +L ++FV L + ++ + G+ Sbjct: 136 LEIDKE-SIPE-KEKDQKKHSYFFKDIL---FRNKL--IVFVILLTSLFVVGLAVAGSFY 188 Query: 806843 ---VLDYVVSADNMNLLGVLVLTFAGIFAVGALSQYVETRLVELLHQLTQINMTEGLLGH 807013 ++D ++ L + L F + + + +V + L+ L M+ Sbjct: 189 IKFLVDLIIPRSLRESLITITLIFISMVLIRCIFDFVRSYLIIKLSYKVDKEMSNVYFNK 248 Query: 807014 LLRNPMSWFEKRHVGDVFARIKAQDEISVHATRTVTSMCIDIAVGSLALVLMLVQSRMLT 807193 + + P+++FE R G+V +R I + + IDI + L L ++L ++ + Sbjct: 249 VTKLPINFFENREDGEVISRFNDGIYIKDFFSANFVTAIIDIIL-ILGLGVILYRTNNIL 307 Query: 807194 AVAVGMFVVYLA-VALGMFARMRDNHALVLETSARCDDALIETIRAASLIKLAQGETRRT 807370 + + + ++ L+ +A+ F ++ + ++E A+ LI ++ + + + Sbjct: 308 FLTIILPILLLSCLAILFFDHLKKKNQKLMEDKAKSTSLLINFLKNMTTVYSLNKTSFFL 367 Query: 807371 ALFMIKYKEYVSALLASNRLTSARDAILKLVQYADTIAITWFAARLMLAGTVSVGVFYSF 807550 F + Y + +++ + + + + + L+Q + TI I W R +L ++S+G Sbjct: 368 EKFHLTYDKQLNSTFSVAKAVISNEILKGLIQNSFTIIILWVGTRQVLNDSMSLGT---- 423 Query: 807551 LIYKSLMSERFAHAVNGAFAYFMLSVPTARVADIVECEEERYTPLADCNR-VTEMRKFER 807727 L++ + ++ +++ + + A VA I + Y D N +TE+ + Sbjct: 424 LLFINTLAAFLLSSLDRILS-MQSDLQQAHVASIRFFDVVNYPVQQDSNENLTELDFIQN 482 Query: 807728 VEVRNVTF-----RYGVSDQPVLRDVSIDIRHGDKIAITGPSGAGKSTLFKLLSASEPLQ 807892 ++ N+ RY ++ D+++ + DK+ I G SG GKST K LS + Sbjct: 483 IKTVNLNIGADPMRY------IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVP 536 Query: 807893 EGQIALNGIAWPNLTVDEIRRHAAHMRQGDLILHGSIAENITLFAASIDEDRVHALLEDV 808072 + I LNG+ IR+ ++ + + G+I EN+ + D++ + Sbjct: 537 DKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTIKENLCM-GEIFDQNEIENACIMS 595 Query: 808073 GLLQDVMRLPMRTRTVISDTIANISXXXXXXXXXXXXXXXXXSLLLLDEPTSNLDPASVQ 808252 + + L + +S+ +N+S +L+LDE SN+DP + + Sbjct: 596 QCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTK 655 Query: 808253 HVAALLRRLDCTVVVITHD 808309 + L R+DC +++ITH+ Sbjct: 656 LIYETLHRMDCLIILITHN 674 Score = 72.4 bits (176), Expect = 2e-10 Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 5/210 (2%) Frame = -2 Query: 3320485 VDSVSLTVGEGEICVFLGPSGCGKTTTLKMINRLIAPTSGRVLINGEDTSGLNEVELRRH 3320306 V+ ++L + + + +G SG GK+T K +++L + +NG D + + + +R+ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 3320305 IGYVIQQIGLFPNMTIEENITVVPRLLGWDRKRCRERA--TELMSMVALEPKQY---LKR 3320141 I Y+ + LF TI+EN+ + +D+ ++ + KQY L Sbjct: 559 IVYIDENPFLFKG-TIKENLCMGEI---FDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 3320140 YPRELSGGQQQRIGVIRALAADPPVLLMDEPFGAVDPINRESIQNEFFQMQRQLNKTVIM 3319961 LS GQ+QR+ + RA+ P VL++DE +DP N + I ++ +++ +I+ Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLI----YETLHRMDCLIIL 670 Query: 3319960 VSHDIDEAIKLGDRVAVFRRGRLVQYDHPD 3319871 ++H+ K ++ VFR R+++ + + Sbjct: 671 ITHNDPSNFKYNKKL-VFRNNRIIESSYSE 699 Score = 71.6 bits (174), Expect = 3e-10 Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 4/181 (2%) Frame = +1 Query: 942958 NVTLNVARGEVFGIIGRSGAGKSTLLRLVNGLEKPSSGAVRVNGVSVGELDERGLVTLRR 943137 ++ L + R + IIG SG GKST + ++ L K ++ +NG+ + D +++R+ Sbjct: 501 DINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDH---LSIRK 557 Query: 943138 RIGMVFQHFNLLSAKTVRENIALP--LKIAGVPKAAIEKKVDALLELVG--LSAKRDAYP 943305 RI + ++ L T++EN+ + + A I + + + S K Sbjct: 558 RIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENG 616 Query: 943306 ASLSGGQKQRVGIARALVTDPDILLCDEATSALDPETTQAILALLRDINQRLNLTVVLIT 943485 ++LS GQKQR+ +ARA++ P +L+ DE+ S +DP+ T+ I L R++ ++LIT Sbjct: 617 SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL----HRMDCLIILIT 672 Query: 943486 H 943488 H Sbjct: 673 H 673 Score = 67.8 bits (164), Expect = 5e-09 Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%) Frame = +2 Query: 1219529 RIALTDVSLKLQGGDFAVVVGGNGAGKSTFLNMLAGEV-IPDSGVIAIDGKEITTLPTHQ 1219705 R + D++L L D +++G +G GKSTF L+ +PD + ++G +I Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIY-LNGLDINRYDHLS 554 Query: 1219706 RAKYISRVFQDPSIGTATALSLEENLAVANXXXXXXXXXXXXXXVQSEAFRERMASFDLG 1219885 K I + ++P + T ++ENL + + S+ E + + D Sbjct: 555 IRKRIVYIDENPFLFKGT---IKENLCMGEIFDQNEIENAC---IMSQC-HEFICNLDKQ 607 Query: 1219886 LEKRMKAKASLLSGGQRQALSLLMAVLQRPQLLLLDEHTAALDPRTAAIVMRVTEQVVRE 1220065 ++ S LS GQ+Q L+L A+L +PQ+L+LDE + +DP ++ + + Sbjct: 608 YSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIY----ETLHR 663 Query: 1220066 AGLTTLMVTHNMQHALDYGNRLVMMRDGRIV 1220158 +++THN Y +LV R+ RI+ Sbjct: 664 MDCLIILITHNDPSNFKYNKKLV-FRNNRII 693 Score = 65.5 bits (158), Expect = 2e-08 Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 6/210 (2%) Frame = -1 Query: 77744 LENLSLQIRDKEFLVLLGPSGCGKSTTLNMIAGLEEVTDGSLRFDDVEVNSVP--AHKRD 77571 +E+++L + K+ ++++G SG GKST ++ L +V D S+ + +++N + ++ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 77570 VAMVFQSYALYPHKNVYENIAFG--LRMRRHPQAEIDSRVRAAARSLDIEHL--LERRPG 77403 + + ++ L+ + EN+ G A I S+ +LD ++ L Sbjct: 559 IVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGS 617 Query: 77402 QLSGGQRQRVALGRAMVRQPAAFLMDEPLSNLDAALRVSMRASIKALHQSMQTTFVYVTH 77223 LS GQ+QR+AL RA++ QP ++DE LSN+D + + + LH+ M + +TH Sbjct: 618 NLSTGQKQRLALARAILHQPQVLILDESLSNIDPD---NTKLIYETLHR-MDCLIILITH 673 Query: 77222 DQAEALTLADRIVVMRDGVVQQIGSPDDIY 77133 + ++V + +++ S + Y Sbjct: 674 NDPSNFKYNKKLVFRNNRIIESSYSENKEY 703 Score = 63.5 bits (153), Expect = 9e-08 Identities = 56/198 (28%), Positives = 103/198 (52%), Gaps = 10/198 (5%) Frame = -1 Query: 2284187 VRNLTIRLGANT---VIDNLDLDVRAGEFVVLLGPSGCGKSTLLHSIAGLIDVTGGSIEI 2284017 ++ + + +GA+ ++++++L + + V+++G SG GKST S++ L V SI + Sbjct: 483 IKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYL 542 Query: 2284016 AGEDMTWADPKD--RRIALVFQSYALYPTMSVERNLSFALRINGTPKAEIARRVARASEM 2283843 G D+ D +RI + ++ L+ +++ NL I + E A +++ E Sbjct: 543 NGLDINRYDHLSIRKRIVYIDENPFLFKG-TIKENLCMG-EIFDQNEIENACIMSQCHEF 600 Query: 2283842 L-----QLGPLLKRKPAQLSGGQRQRVAIGRAIVREADVFLFDEPLSNLDAKLRTELRRE 2283678 + Q L + LS GQ+QR+A+ RAI+ + V + DE LSN+D T+L E Sbjct: 601 ICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD-NTKLIYE 659 Query: 2283677 LKQLHQRLGATMIYVTHD 2283624 LH R+ +I +TH+ Sbjct: 660 --TLH-RMDCLIILITHN 674 Score = 62.8 bits (151), Expect = 1e-07 Identities = 53/205 (25%), Positives = 103/205 (50%), Gaps = 9/205 (4%) Frame = -2 Query: 1033954 VDNVNLSIAKNELFALLGSSGCGKSTLLRMLAGLETVTSGRIFVDGEDLAAMP--PYKRP 1033781 V+++NL + + + ++G SG GKST + L+ L V I+++G D+ ++ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 1033780 VNMMFQSYALFPHMSVEANIAFGLKQEGTPKNEIRERVADA------LNLVQMSKYA-QR 1033622 + + ++ LF +++ N+ G E +NEI + NL + Y Sbjct: 559 IVYIDENPFLFKG-TIKENLCMG---EIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 1033621 KPHQLSGGQQQRVALARSLVKRPKLLLLDEPMSALDKKIRQKTQLELVNIIEKVDVTCVM 1033442 LS GQ+QR+ALAR+++ +P++L+LDE +S +D T+L + + ++D ++ Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKL-IYETLHRMDCLIIL 670 Query: 1033441 VTHDQEEAMTMAGRLAVMSEGRIVQ 1033367 +TH+ +L V RI++ Sbjct: 671 ITHNDPSNFKYNKKL-VFRNNRIIE 694 Score = 62.8 bits (151), Expect = 1e-07 Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 2/185 (1%) Frame = +2 Query: 66020 VDGVNLQVQQGEFHGIVGESGCGKTSLARTIAGLQRPTGGSVLIDGRELNDWRGDRLAFS 66199 V+ +NL + + + I+GESG GK++ A++++ L + S+ ++G ++N R D L+ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDIN--RYDHLSIR 556 Query: 66200 RHVQFIFQDPLASLSRRQTIQESL--EEPLRIHGIGPASEXXXXXXXXXXXXXXPEACLD 66373 + + +I ++P + TI+E+L E + I A L Sbjct: 557 KRIVYIDENPFLF---KGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLS 613 Query: 66374 RLPRALSGGQRQRVAIARALALDPRILICDEPLSALDVSIRAQILNLFADLQKKLDLSIV 66553 LS GQ+QR+A+ARA+ P++LI DE LS +D L + ++D I+ Sbjct: 614 ENGSNLSTGQKQRLALARAILHQPQVLILDESLSNID----PDNTKLIYETLHRMDCLII 669 Query: 66554 LIAHD 66568 LI H+ Sbjct: 670 LITHN 674 Score = 61.2 bits (147), Expect = 4e-07 Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 7/212 (3%) Frame = -2 Query: 560143 DERMFRVGPVNLTFRPGELVFIVGGNGSGKTTLAKVLTGLYEPEDGTIELDGKPVGLAER 559964 D + V +NL + V I+G +G+GK+T AK L+ LY+ D +I L+G + + Sbjct: 493 DPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDH 552 Query: 559963 AAYRQRFTAVFNDFHLFDALL-------GIVDPXXXXXXXXXXXXXALVAKLALDHKVQV 559805 + R+R + + LF + I D + L + ++ Sbjct: 553 LSIRKRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKL 612 Query: 559804 VNGAFSTRALSTGQRKRLALVVAYLEDRPFYLFDEWAADQDPQFKAVFYEQLLPELRSRG 559625 + LSTGQ++RLAL A L + DE ++ DP + YE L Sbjct: 613 SENGSN---LSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYE----TLHRMD 665 Query: 559624 KTVLVISHDDRYFHLADRVLKLENGSIVSETH 559529 +++I+H+D ++ L N I+ ++ Sbjct: 666 CLIILITHNDPSNFKYNKKLVFRNNRIIESSY 697 Score = 59.7 bits (143), Expect = 1e-06 Identities = 39/157 (24%), Positives = 84/157 (53%), Gaps = 9/157 (5%) Frame = -3 Query: 2807523 HILQGVSLQINEGETVTLLGRNGAGKSTTLKAIAGVVAPQRGTVTFNGAEIGGLPPHKIA 2807344 +I++ ++L ++ + V ++G +G GKST K+++ + ++ NG +I I Sbjct: 497 YIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIR 556 Query: 2807343 SRGVCFVPEHRGIFRLLTVEENLRLGARKD-----SPWQLGDIYRIFPRLQE----RRTN 2807191 R + ++ E+ +F+ T++ENL +G D + + + L + + + Sbjct: 557 KR-IVYIDENPFLFK-GTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 2807190 GGAQLSGGEQQMLAIGRALMNHPRLLMLDEPVEGLAP 2807080 G+ LS G++Q LA+ RA+++ P++L+LDE + + P Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP 651 Score = 57.8 bits (138), Expect = 5e-06 Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 14/216 (6%) Frame = +1 Query: 1792648 RIVLAHLDFTLAPGEFVAIMGDSGVGKSTLLNLVAGLDSADSGDVIIDGSVVSRLDDNAA 1792827 R ++ ++ L + V I+G+SG GKST ++ L + ++G ++R D + Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI 555 Query: 1792828 TR--LRRQKLGFVFQAFHVLPHLTLAQNVALPLLL--NDLPTAAA----------LDMLA 1792965 + + + F+F+ T+ +N+ + + N++ A LD Sbjct: 556 RKRIVYIDENPFLFKG-------TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQY 608 Query: 1792966 AVGLSGRGDDFPRQLSGGELQRVAIARALVHRPKLILADEPTGNLDPDTAHDVLALFRAQ 1793145 + LS G + LS G+ QR+A+ARA++H+P++++ DE N+DPD + Sbjct: 609 SYKLSENGSN----LSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM 664 Query: 1793146 SKATGAATIMVTHSEAAAAVADRILILSDGGLHASS 1793253 I++TH++ + ++ L+ + + SS Sbjct: 665 D----CLIILITHNDPSNFKYNKKLVFRNNRIIESS 696 Score = 57.4 bits (137), Expect = 6e-06 Identities = 46/193 (23%), Positives = 97/193 (50%), Gaps = 6/193 (3%) Frame = +3 Query: 2162631 HAVDDVSFDIASGETLGLAGESGSGKTTIGRSVLRLVEPTDGDITFDGKNVMKFNAAGLR 2162810 + V+D++ + + + + GESG+GK+T +S+ +L + D I +G ++ +++ + Sbjct: 497 YIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI- 555 Query: 2162811 DYRRSAQIIFQDPFASINPRMKIRDVIAEPLRVQKILRTESEIDR-----RVDELLDLVS 2162975 R+ I ++PF + I E L + +I ++EI+ + E + + Sbjct: 556 --RKRIVYIDENPFL-------FKGTIKENLCMGEIF-DQNEIENACIMSQCHEFICNLD 605 Query: 2162976 LPSNYK-DRSPTALSGGQRQRIVIARALAVNPKFIVADEPISALDVSIQAQIVSLLDELK 2163152 +YK + + LS GQ+QR+ +ARA+ P+ ++ DE +S +D L+ E Sbjct: 606 KQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNID----PDNTKLIYETL 661 Query: 2163153 ERLGLAMLFISHD 2163191 R+ ++ I+H+ Sbjct: 662 HRMDCLIILITHN 674 Score = 56.2 bits (134), Expect = 1e-05 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 25/258 (9%) Frame = -3 Query: 2914917 QRSAQVSIDFXXXXXXXXXXXAEERVNRTPLAVSVRGLQRRYGA---RVVIDALDLDIRE 2914747 Q++ SI F + E + +++ + GA R +++ ++L + Sbjct: 449 QQAHVASIRFFDVVNYPVQQDSNENLTELDFIQNIKTVNLNIGADPMRYIVEDINLILDR 508 Query: 2914746 GEFVTLLGESGCGKTTLLRALA-------------GLDQPDAGQIRAPERPSVVFQEHRL 2914606 + V ++GESG GK+T ++L+ GLD + +R V E+ Sbjct: 509 KDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR-IVYIDENPF 567 Query: 2914605 LPWATLWENVVLGHETTIGRVGATRALAEVG---------LSGREDDWPRNLSGGQAQRV 2914453 L T+ EN+ +G + +++ S + + NLS GQ QR+ Sbjct: 568 LFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRL 627 Query: 2914452 ALARGLVRDPALLLLDEPFAALDALTRIKMHGLVKELVARHHPGVLLVTHDVDEALTLAD 2914273 ALAR ++ P +L+LDE + +D L+ E + R ++L+TH+ D + + Sbjct: 628 ALARAILHQPQVLILDESLSNIDP----DNTKLIYETLHRMDCLIILITHN-DPSNFKYN 682 Query: 2914272 RILVMRSGRIAASFHPKN 2914219 + LV R+ RI S + +N Sbjct: 683 KKLVFRNNRIIESSYSEN 700 Score = 56.2 bits (134), Expect = 1e-05 Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 6/165 (3%) Frame = +2 Query: 2566421 LGSNGCGKSTTMKMLTGLLPASEGSAKLFGREVDPND-IDTRTRVGYMSQAFSLYGELTV 2566597 +G +G GKST K L+ L + S L G +++ D + R R+ Y+ + L+ + T+ Sbjct: 515 IGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLF-KGTI 573 Query: 2566598 QQNLVLHAQLF---HVPPQQIAARVDEMVSRFG--LGEVRDALPDSLPLGMRQRLSLAVA 2566762 ++NL + ++F + I ++ E + +L G +QRL+LA A Sbjct: 574 KENLCM-GEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARA 632 Query: 2566763 MVHKPELLILDEPTSGVDPVARDNFWQLMIELARRDRVTIFISTH 2566897 ++H+P++LILDE S +DP DN +L+ E R I + TH Sbjct: 633 ILHQPQVLILDESLSNIDP---DN-TKLIYETLHRMDCLIILITH 673 Score = 55.8 bits (133), Expect = 2e-05 Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 9/212 (4%) Frame = -2 Query: 2011333 SVKNIHKSFGD---HHVLKGISLDAHQGDVISILGASGSGKSTFLRCLNLLETPDDGSVA 2011163 ++K ++ + G ++++ I+L + D + I+G SG+GKSTF + L+ L D S+ Sbjct: 482 NIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIY 541 Query: 2011162 LAGEELKMKRRGDGRLQPSDRRQVDRVRSQLGMVFQNFNLWSHMTVLENLIEGPMRVQXX 2010983 L G ++ +R +R ++ + +N L+ T+ ENL G + Q Sbjct: 542 LNGLDI-------------NRYDHLSIRKRIVYIDENPFLFKG-TIKENLCMGEIFDQNE 587 Query: 2010982 XXXXXXXXXXXXXXXXXXXXKR---GHYPAHLSGGQQQRVAIARALAMHPKVMLFDEPTS 2010812 ++LS GQ+QR+A+ARA+ P+V++ DE S Sbjct: 588 IENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLS 647 Query: 2010811 ALDPE---LVGEVLRVMRSLAEEGRTMLVVTH 2010725 +DP+ L+ E L M L ++++TH Sbjct: 648 NIDPDNTKLIYETLHRMDCL------IILITH 673 Score = 55.8 bits (133), Expect = 2e-05 Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 6/202 (2%) Frame = +2 Query: 451943 VVHGIDLDIEDGEFVVLVGPSGCGKSTLMRMVAGLEEISGGDLMIGGARANGL--APQQR 452116 +V I+L ++ + V+++G SG GKST + ++ L ++ + + G N ++ Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 452117 NISMVFQSYALYPHLSVYENIAFGPRIRK---ESAASFKPRIEAAAKMLNLGGY-LDRLP 452284 I + ++ L+ ++ EN+ G + E+A E + Y L Sbjct: 558 RIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENG 616 Query: 452285 RALSGGQRQRVAMGRAVVREPSLFLFDEPLSNLDAKLRVQMRTEIKALHQRLKNTVIYVT 452464 LS GQ+QR+A+ RA++ +P + + DE LSN+D + + LH R+ +I +T Sbjct: 617 SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD---NTKLIYETLH-RMDCLIILIT 672 Query: 452465 HDQIEAMTMADRIVVMNAGRIE 452530 H+ ++V N IE Sbjct: 673 HNDPSNFKYNKKLVFRNNRIIE 694 Score = 54.7 bits (130), Expect = 4e-05 Identities = 54/227 (23%), Positives = 111/227 (48%), Gaps = 13/227 (5%) Frame = -1 Query: 1165403 VLRDVSLTVHKGETVCLLGPSGCGKSTLLRCVNWL-EIPDAGTVYVSNQRMGVREGSAIK 1165227 ++ D++L + + + V ++G SG GKST + ++ L ++PD ++Y++ + + +I Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDK-SIYLNGLDINRYDHLSI- 555 Query: 1165226 LRDAELARSRARIGMVFQHFALWPHLTVLQNVMEAPLYVLKRPRDEVRAEAVRLLERVG- 1165050 R RI + ++ L+ T+ +N+ ++ D+ E ++ + Sbjct: 556 ---------RKRIVYIDENPFLFKG-TIKENLCMGEIF------DQNEIENACIMSQCHE 599 Query: 1165049 --------LAGKMDAFPSRLSGGQKQRVGIARALAMNPDILLFDEPTSALDP---MLVGE 1164903 + K+ S LS GQKQR+ +ARA+ P +L+ DE S +DP L+ E Sbjct: 600 FICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYE 659 Query: 1164902 VLNVMRLLAQEGATMVIVTHEMEFARQVASRIVFMDAGQVIETAHPE 1164762 L+ M L ++++TH + ++VF + ++IE+++ E Sbjct: 660 TLHRMDCL------IILITHNDPSNFKYNKKLVFRN-NRIIESSYSE 699 Score = 54.3 bits (129), Expect = 5e-05 Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 9/217 (4%) Frame = +1 Query: 1518190 LDGISFKTHRREFVCVIGPSGCGKSTLIRILAGLERQTSGSVLLDGKPVQGP---GADRG 1518360 ++ I+ R++ V +IG SG GKST + L+ L + S+ L+G + + Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 1518361 MVFQGYTLFPWL-TVKKNVMFGL-----KMNGHATLHAEREALQWLDLVGLTKFANAYPH 1518522 +V+ F + T+K+N+ G ++ + E + LD K + + Sbjct: 559 IVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSN 618 Query: 1518523 QLSGGMKQRVAIARALANRPRILLMDEPFGALDAQTRAKMQTHLLDIWRNIDVTVLFITH 1518702 LS G KQR+A+ARA+ ++P++L++DE +D + L +D ++ ITH Sbjct: 619 -LSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL----HRMDCLIILITH 673 Query: 1518703 DLDEAIFLADRILVLKANPGEVQELIEVPVPRPRDYS 1518813 + D + F ++ LV + N +IE ++YS Sbjct: 674 N-DPSNFKYNKKLVFRNN-----RIIESSYSENKEYS 704 Score = 53.1 bits (126), Expect = 1e-04 Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 8/222 (3%) Frame = -3 Query: 1144614 SVDNLFLSYGDNP---ILKGVSFHLNPGEVVCLLGASGSGKTTLLRAVAGLEQPSSGRIE 1144444 ++ + L+ G +P I++ ++ L+ + V ++G SG+GK+T ++++ L + I Sbjct: 482 NIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIY 541 Query: 1144443 LDGKAFFDGAAHVDLPVEQRSLGLVFQSYALWPHRTVADNVGYGL-----KLRRVSPAEQ 1144279 L+G D + L + +R + + + T+ +N+ G ++ Q Sbjct: 542 LNG---LDINRYDHLSIRKRIVYIDENPFLF--KGTIKENLCMGEIFDQNEIENACIMSQ 596 Query: 1144278 KKRVQAALDQLGLGHLAARYPYQLSGGQQQRVAIARALVYNPPVILLDEPLSNLDAKLRE 1144099 LD+ + + LS GQ+QR+A+ARA+++ P V++LDE LSN+D Sbjct: 597 CHEFICNLDKQ-YSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNID----P 651 Query: 1144098 EARAWLRELIVSLGLSALCVTHDQTEAMAMSDRILLLRNGRI 1143973 + + E + + + +TH+ + + L+ RN RI Sbjct: 652 DNTKLIYETLHRMDCLIILITHNDPSNFKYNKK-LVFRNNRI 692 Score = 52.4 bits (124), Expect = 2e-04 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 10/160 (6%) Frame = +1 Query: 394159 HAVSGVSLEVAKGDALAIVGESGSGKSTVARMMVGLTAPTTGSICFRGDALNTMTRAQNA 394338 + V ++L + + D + I+GESG+GKST A+ + L SI G +N R + Sbjct: 497 YIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDIN---RYDHL 553 Query: 394339 TFRQRVQMVFQSTTNSLNPRKTIATTLAEAIGNDGVPVRQLLDMVRLPAFV--------- 394491 + R+R+ + + N + TI L D + M + F+ Sbjct: 554 SIRKRIVYIDE---NPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSY 610 Query: 394492 -LARYPHQLSGGQRQRVGIARALARRPELVVADEPTSALD 394608 L+ LS GQ+QR+ +ARA+ +P++++ DE S +D Sbjct: 611 KLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNID 650 Score = 52.4 bits (124), Expect = 2e-04 Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 3/177 (1%) Frame = +1 Query: 3146113 RVVLFGPSGAGKSLTLQAIAGLLRPDEGTITLHGNALFDSARGIDLKPQARRVAYLFQDF 3146292 +V++ G SG GKS ++++ L + + +I L+G D R L + +R+ Y+ ++ Sbjct: 511 KVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNG---LDINRYDHLSIR-KRIVYIDENP 566 Query: 3146293 ALFPHLNVRQNIGFGLQHGWLNPRARISHPQIDYWLDALELKSV--AGNHPAQLSGGQKQ 3146466 LF +++N+ G Q ++ L+ + + + LS GQKQ Sbjct: 567 FLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQ 625 Query: 3146467 RVALARALVAQPRLLLLDEPFSALDSAXXXXXXXXXXXXQTRLDIPMVLITH-DPDD 3146634 R+ALARA++ QP++L+LDE S +D R+D ++LITH DP + Sbjct: 626 RLALARAILHQPQVLILDESLSNIDPDNTKLIYETLH----RMDCLIILITHNDPSN 678 Score = 51.6 bits (122), Expect = 3e-04 Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 13/215 (6%) Frame = -2 Query: 2065591 RTVLDDLSLTIQRGELLTVLGRSGCGKTTLLRFIAGFIEADGLSGTLTVAGHDLT---HV 2065421 R +++D++L + R + + ++G SG GK+T + ++ + S + + G D+ H+ Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKS--IYLNGLDINRYDHL 553 Query: 2065420 PPHKRNLGLLFQSYALFPHLSVFENVAFGLRARRTPSKDIARRVA--------DALKLVQ 2065265 KR + + ++ LF ++ EN+ G + ++ D + Sbjct: 554 SIRKR-IVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYK 611 Query: 2065264 LGDAGHVMPAQLSGGMQQRVALARALVIEPDVLLLDEPLSALDANLRASVRSELKALHER 2065085 L + G + LS G +QR+ALARA++ +P VL+LDE LS +D + K ++E Sbjct: 612 LSENG----SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD-------NTKLIYET 660 Query: 2065084 LPNL--TIVCVTHDQDDALVLSDRTLLMREGRIAQ 2064986 L + I+ +TH+ D + ++ L+ R RI + Sbjct: 661 LHRMDCLIILITHN-DPSNFKYNKKLVFRNNRIIE 694 Score = 51.2 bits (121), Expect = 4e-04 Identities = 50/218 (22%), Positives = 109/218 (50%), Gaps = 13/218 (5%) Frame = -2 Query: 3250012 VVKQLDLDIYQGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGEIWLDGTLLNTVP--PHKR 3249839 +V+ ++L + + + + ++G SG+GK+T L+ I+L+G +N ++ Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 3249838 NIGMVFQNYALFPHLTVEQNVAYPLTVRKISAQERAHRTNNALKMVRMESFA----KRYP 3249671 I + +N LF T+++N L + +I Q + NA M + F K+Y Sbjct: 558 RIVYIDENPFLFKG-TIKEN----LCMGEIFDQ---NEIENACIMSQCHEFICNLDKQYS 609 Query: 3249670 -------AQLSGGQQQRIALARALVFEPKLVLMDEPLGALDKQLREHMQYELKSLHEKLG 3249512 + LS GQ+QR+ALARA++ +P+++++DE L +D ++ + ++LH ++ Sbjct: 610 YKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKLIYETLH-RMD 665 Query: 3249511 VTFVYVTHDQGEALTMSDRVAVFDKGIVQQLDTVDRLY 3249398 + +TH+ + ++ + I++ + ++ Y Sbjct: 666 CLIILITHNDPSNFKYNKKLVFRNNRIIESSYSENKEY 703 Score = 51.2 bits (121), Expect = 4e-04 Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 8/159 (5%) Frame = -3 Query: 1876752 RNETVAIMGRNGMGKTTLFKSLIGILPLKAGSVKLDGEEVSRDESFRRVAKGIAYVPQGR 1876573 R + V I+G +G GK+T KSL + + S+ L+G +++R + + K I Y+ + Sbjct: 508 RKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHL-SIRKRIVYIDENP 566 Query: 1876572 QIFATLSVEENI-------QTGLENSPTKRVPDEIYALFPVLYEMR-SRKXXXXXXXXXX 1876417 +F +++EN+ Q +EN+ E Y + S Sbjct: 567 FLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQ 625 Query: 1876416 XLAIARALVTEPKVLLLDEPTEGIQPSIIKDIARALNEI 1876300 LA+ARA++ +P+VL+LDE I P K I L+ + Sbjct: 626 RLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM 664 Score = 50.1 bits (118), Expect = 0.001 Identities = 27/81 (33%), Positives = 51/81 (62%) Frame = -3 Query: 1641549 LSGGQRQRVALARAMVFEPQLILMDEPLSALDKQLRETMQIELRRLHRRLGATIVYVTHD 1641370 LS GQ+QR+ALARA++ +PQ++++DE LS +D + ++ LH R+ I+ +TH+ Sbjct: 619 LSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKLIYETLH-RMDCLIILITHN 674 Query: 1641369 QREALTMSDRVAVLKNGRLVQ 1641307 + ++ V +N R+++ Sbjct: 675 DPSNFKYNKKL-VFRNNRIIE 694 Score = 49.7 bits (117), Expect = 0.001 Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 7/210 (3%) Frame = -3 Query: 1711137 VRDLRVSFGA---HHAVRGLSFDIAQGETLALVGESGCGKSATALSLMRLVPTPGRVTGS 1710967 ++ + ++ GA + V ++ + + + + ++GESG GKS A SL +L P + S Sbjct: 483 IKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDK---S 539 Query: 1710966 LRFDGRDLLDLSPREIRDIRGRQISMIFQEPMTSLNPVLSIGTQIVETLRQHESLSKAAA 1710787 + +G LD++ + IR R + + NP L GT I E L E + Sbjct: 540 IYLNG---LDINRYDHLSIRKRIVYI-------DENPFLFKGT-IKENLCMGEIFDQNEI 588 Query: 1710786 WKRAV--ELLELVQIPDPQ--RRIFDFPHELSGGQRQRVMIAMAVACRPRLLIADEPTTA 1710619 + + E + D Q ++ + LS GQ+QR+ +A A+ +P++LI DE + Sbjct: 589 ENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSN 648 Query: 1710618 LDVTIQAHILELLDGLRRELSMSLLLITHD 1710529 +D I E L + ++LITH+ Sbjct: 649 IDPDNTKLIYETL----HRMDCLIILITHN 674 Score = 49.3 bits (116), Expect = 0.002 Identities = 39/182 (21%), Positives = 90/182 (49%), Gaps = 11/182 (6%) Frame = -3 Query: 525714 LRDFSMSVARGEFVAVVGPTGCGKSTTLSMITGLLKPTTGEVRVMGAPVDGID-----PR 525550 + D ++ + R + V ++G +G GKST ++ L K + + G ++ D R Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 525549 IGFVFQADAVFPWRSVLDNVAAGPLYRGRS--KSAAYDEANEWLRRVGLDKFGKHYPHQ- 525379 I ++ + +F ++ +N+ G ++ + + +E++ LDK + + Sbjct: 559 IVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFI--CNLDKQYSYKLSEN 615 Query: 525378 ---LSGGMRKRVALAQTFINKPEILLMDEPFSALDMQTRTLMQDELLQLWGGAGSVVFVT 525208 LS G ++R+ALA+ +++P++L++DE S +D L+ + L ++ ++ +T Sbjct: 616 GSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM---DCLIILIT 672 Query: 525207 HD 525202 H+ Sbjct: 673 HN 674 Score = 48.9 bits (115), Expect = 0.002 Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 3/161 (1%) Frame = -2 Query: 831418 VDGVSFNVRRGETVGLVGESGCGKSTLARAIIGLAPVASGSVRWLGDETVLPGARRDTSR 831239 V+ ++ + R + V ++GESG GKST A+++ L V S+ G L R D Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNG----LDINRYDHLS 554 Query: 831238 LRRDVQMIFQDPLASLDPRMTIEQIVAEPLTTHGQDIARADVQRRVLTMLERVGLNAQH- 831062 +R+ + I ++P + TI++ + +I A + + + L+ Q+ Sbjct: 555 IRKRIVYIDENPFLF---KGTIKENLCMGEIFDQNEIENACIMSQCHEFI--CNLDKQYS 609 Query: 831061 --LRRYPHEFSGGQCQRVGIARALIGEPQLVICDEPVSALD 830945 L S GQ QR+ +ARA++ +PQ++I DE +S +D Sbjct: 610 YKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNID 650 Score = 48.5 bits (114), Expect = 0.003 Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 8/220 (3%) Frame = -1 Query: 2932997 ILDGVDLTVARGETVCVLGPSGSGKSTLLRCLNWLSPPDEGAVWIGDQRLGLRETPNGAT 2932818 I++ ++L + R + V ++G SG+GKST + L+ L + ++++ NG Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYL-----------NGLD 546 Query: 2932817 SPRPEREIRAQRSRIGMVFQSFNLWPHMTALENVMEGLLSVKRMNRLDATDLAVEALRQV 2932638 R + + R RI + ++ L+ T EN+ G + N ++ + + + Sbjct: 547 INRYDH--LSIRKRIVYIDENPFLFKG-TIKENLCMG--EIFDQNEIENACIMSQCHEFI 601 Query: 2932637 GLGGKHTSMP-----ANLSGGQQQRVGIARTLAMAPEVILFDEPTSALDPE---LVGEVL 2932482 K S +NLS GQ+QR+ +AR + P+V++ DE S +DP+ L+ E L Sbjct: 602 CNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL 661 Query: 2932481 AVMRGLAANATTMIVVTHEIGFARDVSDRVIFMDRGRIVE 2932362 M L +I++TH + +++F + RI+E Sbjct: 662 HRMDCL------IILITHNDPSNFKYNKKLVFRN-NRIIE 694 Score = 48.5 bits (114), Expect = 0.003 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 10/148 (6%) Frame = +2 Query: 2565623 LIGPDGVGKSSXXXXXXXXXXVQEGTVEVLGGDMRSRRHRALVCPRIAYMPQGLGKNLYP 2565802 +IG G GKS+ V + ++ + G D+ H + + RI Y+ + P Sbjct: 514 IIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLS-IRKRIVYIDEN------P 566 Query: 2565803 TL---TVEENLQFFARLFGHDAAER-------RRRIDSLTRSTGLKPFLARPAGKLSGGM 2565952 L T++ENL +F + E I +L + K L+ LS G Sbjct: 567 FLFKGTIKENL-CMGEIFDQNEIENACIMSQCHEFICNLDKQYSYK--LSENGSNLSTGQ 623 Query: 2565953 KQKLALCCALIHDPDLLILDEPTTGVDP 2566036 KQ+LAL A++H P +LILDE + +DP Sbjct: 624 KQRLALARAILHQPQVLILDESLSNIDP 651 Score = 47.0 bits (110), Expect = 0.008 Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 12/203 (5%) Frame = -1 Query: 2780066 VTLLGPSGSGKTTLLNVIAGMVNPSSGQIFVRGVDITKAPP-SARGLGMVFQNYALMPHM 2779890 V ++G SG+GK+T ++ + I++ G+DI + S R + + Sbjct: 512 VLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKG 571 Query: 2779889 TVFDNIAFPLRVRKMPKDEIARKVKDVLDMVRLPDIAQRKPKE-----------LSGGQQ 2779743 T+ +N+ M + ++++ M + + K+ LS GQ+ Sbjct: 572 TIKENLC-------MGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQK 624 Query: 2779742 QRVSLARCIVYNPALILLDEPLGALDKKLREQMQLEIRRLHAELGITMLNVTHDQDEALS 2779563 QR++LAR I++ P +++LDE L +D + +L LH + ++ +TH+ Sbjct: 625 QRLALARAILHQPQVLILDESLSNIDP---DNTKLIYETLH-RMDCLIILITHNDPSNFK 680 Query: 2779562 MSDRIVLMNEGRVEQIATPDELY 2779494 + ++V N +E + ++ Y Sbjct: 681 YNKKLVFRNNRIIESSYSENKEY 703 Score = 47.0 bits (110), Expect = 0.008 Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Frame = -2 Query: 980077 VIGDNGAGKSSLIKALSGATVPDEGEILLDGKPVRFRSPLDARAQGIETVYQELAVAPAM 979898 +IG++G GKS+ K+LS + I L+G + L R + VY Sbjct: 514 IIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR---IVY--------- 561 Query: 979897 SIAENLFLARELVKPGW-RGSIFRMIDKRRMLEEATAHM----KDLQIGIRSMRQAVETL 979733 I EN FL + +K G IF + + H D Q + + + L Sbjct: 562 -IDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYK-LSENGSNL 619 Query: 979732 SGGQRQGVAVARSAAFARHVVILDEPTAALGVKEGNMVLELIRRVRDRGLPVILISHNMP 979553 S GQ+Q +A+AR+ V+ILDE + + ++ E + R+ +ILI+HN P Sbjct: 620 STGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM---DCLIILITHNDP 676 Query: 979552 HVFE 979541 F+ Sbjct: 677 SNFK 680 Score = 46.6 bits (109), Expect = 0.011 Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 10/158 (6%) Frame = -2 Query: 1491700 VDAIDLRIAGGQYCCLLGPSGCGKTSTLRMIAGHESVTEGDILIAGRNVTRAEPAARGTA 1491521 V+ I+L + ++G SG GK++ + ++ V + I + G ++ R + + Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 1491520 MVF--QNYALFPHLSALDNVAFSLKMRGIAKDVRRKRAAGLLELVAMSAYAERK------ 1491365 +V+ +N LF + +L M I + A + + +++ Sbjct: 559 IVYIDENPFLFK-----GTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLS 613 Query: 1491364 --PAQLSGGQQQRVALARALLNQPGCLLLDEPLSALDP 1491257 + LS GQ+QR+ALARA+L+QP L+LDE LS +DP Sbjct: 614 ENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP 651 Score = 46.6 bits (109), Expect = 0.011 Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 1/186 (0%) Frame = -1 Query: 2808266 DVTLNIMPRTVHSVIGPNGAGKTTLFHVLTGTLPITEGKIVFDGHDVTHEPDHKRVRRGV 2808087 D+ L + + +IG +G GK+T L+ + + I +G D+ DH +R+ + Sbjct: 501 DINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRY-DHLSIRKRI 559 Query: 2808086 ARSFQVTSLFANLSVRENLRLAAQGVDAVRALNAWAPPHGALTHSDTVDSVLERLALQRF 2807907 + LF +++ENL + + D NA ++ L++ + Sbjct: 560 VYIDENPFLFKG-TIKENLCMG-EIFDQNEIENACI-----MSQCHEFICNLDKQYSYKL 612 Query: 2807906 SEVSAGALSHGQQRRLEVGMALAARPKAIFLDEPTSGMGIDDLDDMKQLIRGL-RDDYTV 2807730 SE + LS GQ++RL + A+ +P+ + LDE S + D D+ K + L R D + Sbjct: 613 SE-NGSNLSTGQKQRLALARAILHQPQVLILDESLSNI---DPDNTKLIYETLHRMDCLI 668 Query: 2807729 VLIEHN 2807712 +LI HN Sbjct: 669 ILITHN 674 Score = 46.6 bits (109), Expect = 0.011 Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 3/63 (4%) Frame = -2 Query: 2249755 ASLSGGQKQRVAIARALAMQPRVMLFDEPTSALDPE---LVGEVLQVMKLLASEGMTMVV 2249585 ++LS GQKQR+A+ARA+ QP+V++ DE S +DP+ L+ E L M L +++ Sbjct: 617 SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMDCL------IIL 670 Query: 2249584 VTH 2249576 +TH Sbjct: 671 ITH 673 Score = 46.2 bits (108), Expect = 0.014 Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 14/201 (6%) Frame = -1 Query: 2122313 IDLTIRRGETLFIVGENGCXXXXXXXXXXXLYSPSSGQLLLDGTPIPAERIDAYRQMFSA 2122134 I+L + R + + I+GE+G LY + L+G I + R+ Sbjct: 502 INLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVY 561 Query: 2122133 VFSDYYLFDDLVARDPEM--------------VARAQKWLEHLEIAHKVKVSDGVFSTID 2121996 + + +LF + + M +++ +++ +L+ + K+S+ + + Sbjct: 562 IDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE---NGSN 618 Query: 2121995 LSAGQRKRLALVHAMLEERPVMMFDEWAADQDPTFRRVFYNEFLPELKRQGKTLIVISHD 2121816 LS GQ++RLAL A+L + V++ DE ++ DP ++ Y L R +I+I+H+ Sbjct: 619 LSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYE----TLHRMDCLIILITHN 674 Query: 2121815 DRFFDTADRVIRLAGGKIVET 2121753 D ++ + +I+E+ Sbjct: 675 DPSNFKYNKKLVFRNNRIIES 695 Score = 45.4 bits (106), Expect = 0.025 Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%) Frame = -1 Query: 2124131 LIGHNGSGKSTLIKILARQQSASGGQILFEGKPLEQWPTRAFAQKLAYLPQHTPSAAGIL 2123952 +IG +G+GKST K L++ I G + ++ + +++ Y+ ++ G + Sbjct: 514 IIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTI 573 Query: 2123951 VRELVAFGRYPWRGALGRFTDADRAKVDEAMVLTDVTGFADRLV-----------DTLSG 2123805 L +G D + +++ A +++ F L LS Sbjct: 574 KENL----------CMGEIFDQN--EIENACIMSQCHEFICNLDKQYSYKLSENGSNLST 621 Query: 2123804 GERQRVWLAMLIAQDADYLLLDEPISALDVAHQVEVLSLVHRLSTERGIGIIVVLHDVNM 2123625 G++QR+ LA I L+LDE +S +D + + +HR+ II++ H+ Sbjct: 622 GQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMDCL----IILITHNDPS 677 Query: 2123624 AARYCDEIV 2123598 +Y ++V Sbjct: 678 NFKYNKKLV 686 Score = 45.1 bits (105), Expect = 0.032 Identities = 38/182 (20%), Positives = 83/182 (45%), Gaps = 21/182 (11%) Frame = -3 Query: 2637780 VLDNVDFTVRKGECVALVGPSGTGKTTLLRLLA-------------GLESVSGGRTEVTQ 2637640 ++++++ + + + V ++G SGTGK+T + L+ GL+ + + Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 2637639 NTSVVFQEPRLIQALRVWKNVLLDDAHKPDAKARARVALQ--------DVGLEDKLESWP 2637484 + + P L + + +N+ + + + A + Q D KL Sbjct: 558 RIVYIDENPFLFKGT-IKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENG 616 Query: 2637483 VSLSGGQAQRVAVARALYRSPELMLLDEPFSALDAFTRRSMQSLVLKLWAKYRFGLVIVT 2637304 +LS GQ QR+A+ARA+ P++++LDE S +D + L+ + + ++++T Sbjct: 617 SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTK----LIYETLHRMDCLIILIT 672 Query: 2637303 HD 2637298 H+ Sbjct: 673 HN 674 Score = 44.3 bits (103), Expect = 0.055 Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 1/181 (0%) Frame = -2 Query: 2892856 NPRRKRVNDVSFALRRGEILGVAGLVGAGRTELMQAIFGAYPGVSEATVVMEGKPLKIRA 2892677 +P R V D++ L R + + + G G G++ +++ Y V + ++ + G + R Sbjct: 493 DPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYK-VPDKSIYLNGLDIN-RY 550 Query: 2892676 PVDAIRAGIGMVPEDRKRHGIVPGLSVGHNITLAVLGRFASAGRIDSAAELDTIHTEMKR 2892497 +IR I + E+ P L G +G I++A + H + Sbjct: 551 DHLSIRKRIVYIDEN-------PFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICN 603 Query: 2892496 LSVRAAHPMLSIAS-LSGGNQQKAVLTRMLLTNPKVLILDEPTRGVDVGAKYEIYKLIFQ 2892320 L + ++ + S LS G +Q+ L R +L P+VLILDE +D IY+ + + Sbjct: 604 LDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHR 663 Query: 2892319 L 2892317 + Sbjct: 664 M 664 Score = 43.5 bits (101), Expect = 0.094 Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 5/157 (3%) Frame = +2 Query: 717908 HILFDVGLEVGRGEVVALMGRNGAGKSTTMKAVMGLLPRRQGEVNFRGQNIAALPPYRIA 718087 +I+ D+ L + R + V ++G +G GKST K++ L + G +I I Sbjct: 497 YIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI- 555 Query: 718088 RMGMGFVPEDRRVFADLTVMENLDTGR---QPPREGA--PQWTPEKLFRLFPNLGEMPQR 718252 R + ++ E+ +F T+ ENL G Q E A E + L Sbjct: 556 RKRIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 718253 PGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAP 718363 G +S G++Q L ++R ++ P +++LDE + P Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP 651 Score = 41.6 bits (96), Expect = 0.36 Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 1/220 (0%) Frame = +3 Query: 393273 VLHGLDLQVGRGEAVGLVGESGSGKXXXXXXXXXXXXXXXRISGGRIVLDGEDLGHASES 393452 ++ ++L + R + V ++GESG+GK ++ I L+G D+ Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGK----STFAKSLSKLYKVPDKSIYLNGLDINRYDHL 553 Query: 393453 RMRVLRGRRVSMIFQDPATALNPAFTIGAQLA-DVIRAHRPLRGRAIRDEVHSVLARVGF 393629 +R +R+ I ++P TI L I + I + H + + Sbjct: 554 SIR----KRIVYIDENPFLFKG---TIKENLCMGEIFDQNEIENACIMSQCHEFICNLD- 605 Query: 393630 KDPRTTERAYPHELSGGMKQRAMIAAAIVCEPALLLADEPTTALDVTVQAQIVELLRTLV 393809 K LS G KQR +A AI+ +P +L+ DE + +D I E L Sbjct: 606 KQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLH--- 662 Query: 393810 DEMDLGLVFITHNLDLVAELCSRAVVLKQGHVVEAGPVED 393929 MD ++ ITHN D ++ +V + ++E+ E+ Sbjct: 663 -RMDCLIILITHN-DPSNFKYNKKLVFRNNRIIESSYSEN 700 Score = 41.6 bits (96), Expect = 0.36 Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 4/196 (2%) Frame = +1 Query: 1501192 LLGENGAGKSTLVKGLVGYGVLDDGQIAADGREVHIHSPRDAQALGIGMVY--QHFTLAA 1501365 ++GE+G GKST K L + D I +G +++ + D ++ +VY ++ L Sbjct: 514 IIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRY---DHLSIRKRIVYIDENPFLFK 570 Query: 1501366 GLSVEENLLLARGQMPWKIDWKAERAALAAFMQRMP--FRLPLDAPVAGLAAGEKQKLEI 1501539 G +++ENL + +I+ + F+ + + L + L+ G+KQ+L + Sbjct: 571 G-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLAL 629 Query: 1501540 LKQLYLQQRFLILDEPTSVLTPQEADEVLGLMRDLTTRGELTVLMITHKFREVMAYADDV 1501719 + + Q + LILDE S + P L+ + R + +++ITH Y + Sbjct: 630 ARAILHQPQVLILDESLSNIDPDNTK----LIYETLHRMDCLIILITHNDPSNFKY-NKK 684 Query: 1501720 TVLRKGRQVGTSAVAN 1501767 V R R + +S N Sbjct: 685 LVFRNNRIIESSYSEN 700 >ref|YP_024539.1|putative nicotinamide phosphoribosyl transferase Length = 489 Score = 208 bits (530), Expect = 2e-51 Identities = 149/492 (30%), Positives = 237/492 (48%), Gaps = 40/492 (8%) Frame = +1 Query: 1297333 NPILNTDSYKASHYLQYPPEASAMFSYIESRGGRY----DRTLFFGLQMLIKEYLC---- 1297488 NP L D YK SH QYP ++S + R +Y D + FG+Q L+K+Y Sbjct: 3 NPTLMCDFYKLSHREQYPEGTEIVYSTLVPRSNKYYEHSDNIVVFGIQSLVKKYFIDMFN 62 Query: 1297489 -----RPVTPAMIGQAKAFFTAHGEPFNEAGWRHVVEQYG-GYLPVRIRAVPEGSVVPTH 1297650 RP + + G+ +A +H+ + + GYLP+ +RA+ EG+VV + Sbjct: 63 KEFFNRPKEEVINEYKRTVKFTLGQENPDA--KHLEQLHDLGYLPIDVRALKEGTVVHPN 120 Query: 1297651 NVLVTVECDDPQVFWLASYLETML-LRVWYPITVATQSWHLRKTIRGYLLKSSDDLAQLP 1297827 ++T+E FWL +YLET++ + W +T AT ++ +RK + Y +++ ++ + Sbjct: 121 TPVMTIENTHSDFFWLTNYLETIISTQTWQAMTSATLAYDMRKMLDKYAMETVGNIEAVD 180 Query: 1297828 FKLHDFGARXXXXXXXXXXXXXXHLVSFMGSDTVLGVVAANHYYN----ETMAAFSVPAA 1297995 F+ HDF R H +SF GSDTV V YYN + M S+PA Sbjct: 181 FQGHDFSMRGMSSLETAQLSSAGHAISFKGSDTVPVVDFLESYYNADVEKEMVVASIPAT 240 Query: 1297996 EHSTITSWGRER---ETDAFRNMIAQFGKPGAIVSVVSDSYDLFAALRVWGTELKQAVLD 1298166 EHS + + G E + ++ M+ + P I S+VSD++D + + LK +++ Sbjct: 241 EHSVMCANGNYETMDEYETYKRMLTEI-YPTGIFSIVSDTWDFWGNMTKTLPRLKDIIME 299 Query: 1298167 SGGMLVIRPDSGDPRTIVLQ------------TMRALEASFGSAVNGKGRRVLN-NVRVI 1298307 G +VIRPDSGDP I+ + L +FG KG +VL+ +V +I Sbjct: 300 RNGKVVIRPDSGDPVKIICGDPDADTEYERKGAVEVLWDTFGGTETEKGYKVLDEHVGLI 359 Query: 1298308 QGDGVNPDSIEAILAALDQAGFAADNIVFGMGGALLQQINRDTQRFAMKCSAIRLGDEWH 1298487 GD +N + + I L + GFA+ N+V G+G Q RDT FA+K + ++ +E Sbjct: 360 YGDSINYERAQQICEGLKEKGFASINVVLGVGSFSYQFNTRDTHGFAIKATYAKIKNEEK 419 Query: 1298488 DVLKDPITDTAKRSMKGRLTLLVNRHTGEYRTTTLPVAWNAHMVEGDW-----EEALVTV 1298652 + K+P TD+ KRS KGR+ + + +W ++ W L V Sbjct: 420 LIYKNPKTDSGKRSHKGRVAVYKDG------------SWEDNLTLHQWLNKQNVNQLERV 467 Query: 1298653 FDSGKLLVDVSL 1298688 F+ GKL D SL Sbjct: 468 FEDGKLYRDQSL 479 >ref|NP_536395.1|ISBt3 transposase subunit protein Length = 284 Score = 172 bits (436), Expect = 1e-40 Identities = 96/270 (35%), Positives = 153/270 (56%), Gaps = 5/270 (1%) Frame = -1 Query: 688652 VSPSGYHXXXXXXXXXXXXXXRISNDALLV-HIKAVHAESKGEYGWPRVWKKLLAQGIRV 688476 ++PSGY R D LL IK V + YG P+VWK++ +GI V Sbjct: 3 IAPSGYRRHAAQLRDPSKRCARAKRDELLQPEIKRVWQANMQVYGVPKVWKQMNREGITV 62 Query: 688475 SKDRVQQLMKLHGIRAKTKRRFKVTTDSNHSLPVAPDLLQRDFSPARPDQVWTTDITYIW 688296 ++ V +LMKL G+R + + TT ++ + P D + R F RP+Q+W +D TY+ Sbjct: 63 ARCTVGRLMKLQGLRGAVRGKRVRTTITDVTAPRPLDRVNRQFKADRPNQLWVSDFTYVS 122 Query: 688295 TDEGWLFLTVILDLFSRQVVGWSMQPHMRTELVSDALRMAWFRRRP--EAGLIVHSDRGS 688122 T +GWL++ ++D+F+R++VGW + M T+ V DAL A + R+P + LI HSDRGS Sbjct: 123 TWQGWLYVAFVIDVFARRIVGWRVSSSMTTDFVLDALEQALYARQPGEDGTLIHHSDRGS 182 Query: 688121 QYCSRDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLKRARILGQR--FATRREAMDE 687948 QY S + + L G+ S+ RG+ +DNA E++ G L + ++ +R + TR Sbjct: 183 QYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETING-LYKTELIHRRAPWKTRESVELA 241 Query: 687947 VIDWLSFYNHSRLHSTLGYVSPMQFERDWY 687858 ++W+++YNH RL LGY+ P + E ++Y Sbjct: 242 TLEWVAWYNHHRLMEPLGYIPPAEAEANYY 271 Score = 172 bits (436), Expect = 1e-40 Identities = 96/270 (35%), Positives = 153/270 (56%), Gaps = 5/270 (1%) Frame = -2 Query: 125551 VSPSGYHXXXXXXXXXXXXXXRISNDALLV-HIKAVHAESKGEYGWPRVWKKLLAQGIRV 125375 ++PSGY R D LL IK V + YG P+VWK++ +GI V Sbjct: 3 IAPSGYRRHAAQLRDPSKRCARAKRDELLQPEIKRVWQANMQVYGVPKVWKQMNREGITV 62 Query: 125374 SKDRVQQLMKLHGIRAKTKRRFKVTTDSNHSLPVAPDLLQRDFSPARPDQVWTTDITYIW 125195 ++ V +LMKL G+R + + TT ++ + P D + R F RP+Q+W +D TY+ Sbjct: 63 ARCTVGRLMKLQGLRGAVRGKRVRTTITDVTAPRPLDRVNRQFKADRPNQLWVSDFTYVS 122 Query: 125194 TDEGWLFLTVILDLFSRQVVGWSMQPHMRTELVSDALRMAWFRRRP--EAGLIVHSDRGS 125021 T +GWL++ ++D+F+R++VGW + M T+ V DAL A + R+P + LI HSDRGS Sbjct: 123 TWQGWLYVAFVIDVFARRIVGWRVSSSMTTDFVLDALEQALYARQPGEDGTLIHHSDRGS 182 Query: 125020 QYCSRDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLKRARILGQR--FATRREAMDE 124847 QY S + + L G+ S+ RG+ +DNA E++ G L + ++ +R + TR Sbjct: 183 QYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETING-LYKTELIHRRAPWKTRESVELA 241 Query: 124846 VIDWLSFYNHSRLHSTLGYVSPMQFERDWY 124757 ++W+++YNH RL LGY+ P + E ++Y Sbjct: 242 TLEWVAWYNHHRLMEPLGYIPPAEAEANYY 271 >ref|NP_958672.1|Bbp2 Length = 163 Score = 168 bits (426), Expect = 2e-39 Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 2/159 (1%) Frame = -1 Query: 522236 NFDDAFKALIGNEGGYSFNPHDPGGETMWGVTARVARSQGYTGAMKDLPLDTAKQIAKQK 522057 +FD AF LIG+EGGYS NP DPGGETMWGVTA VAR+ GYTG M+D+P DTAK I + + Sbjct: 2 DFDTAFDRLIGHEGGYSNNPADPGGETMWGVTAAVARANGYTGPMRDMPRDTAKAIYRAR 61 Query: 522056 YWDPLHLDELDARVAFQIFDA--NYNGGLVVLWMQKASGAKEDGKFGPDTLDAVKSADPL 521883 YW P+ D L VAFQ+FDA N+ G W+Q A G +DG+ GP TL+A +P Sbjct: 62 YWTPVRGDMLPPAVAFQVFDAAVNHGTGQAAKWLQAAVGTAQDGQIGPLTLNAAAGMNPT 121 Query: 521882 KFVMRFAAYRLRYLRNLHAWPNFSRGWTDRMASNLLLGA 521766 + F + R+ + NL WP F +GW R+A NL A Sbjct: 122 MLALLFNSARMMFYTNLPTWPTFGKGWARRVAGNLKYAA 160 >ref|NP_996565.1|hypothetical protein predicted by GeneMark Length = 163 Score = 168 bits (426), Expect = 2e-39 Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 2/159 (1%) Frame = -1 Query: 522236 NFDDAFKALIGNEGGYSFNPHDPGGETMWGVTARVARSQGYTGAMKDLPLDTAKQIAKQK 522057 +FD AF LIG+EGGYS NP DPGGETMWGVTA VAR+ GYTG M+D+P DTAK I + + Sbjct: 2 DFDTAFDRLIGHEGGYSNNPADPGGETMWGVTAAVARANGYTGPMRDMPRDTAKAIYRAR 61 Query: 522056 YWDPLHLDELDARVAFQIFDA--NYNGGLVVLWMQKASGAKEDGKFGPDTLDAVKSADPL 521883 YW P+ D L VAFQ+FDA N+ G W+Q A G +DG+ GP TL+A +P Sbjct: 62 YWTPVRGDMLPPAVAFQVFDAAVNHGTGQAAKWLQAAVGTAQDGQIGPLTLNAAAGMNPT 121 Query: 521882 KFVMRFAAYRLRYLRNLHAWPNFSRGWTDRMASNLLLGA 521766 + F + R+ + NL WP F +GW R+A NL A Sbjct: 122 MLALLFNSARMMFYTNLPTWPTFGKGWARRVAGNLKYAA 160 >ref|NP_996613.1|hypothetical protein predicted by GeneMark Length = 163 Score = 168 bits (426), Expect = 2e-39 Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 2/159 (1%) Frame = -1 Query: 522236 NFDDAFKALIGNEGGYSFNPHDPGGETMWGVTARVARSQGYTGAMKDLPLDTAKQIAKQK 522057 +FD AF LIG+EGGYS NP DPGGETMWGVTA VAR+ GYTG M+D+P DTAK I + + Sbjct: 2 DFDTAFDRLIGHEGGYSNNPADPGGETMWGVTAAVARANGYTGPMRDMPRDTAKAIYRAR 61 Query: 522056 YWDPLHLDELDARVAFQIFDA--NYNGGLVVLWMQKASGAKEDGKFGPDTLDAVKSADPL 521883 YW P+ D L VAFQ+FDA N+ G W+Q A G +DG+ GP TL+A +P Sbjct: 62 YWTPVRGDMLPPAVAFQVFDAAVNHGTGQAAKWLQAAVGTAQDGQIGPLTLNAAAGMNPT 121 Query: 521882 KFVMRFAAYRLRYLRNLHAWPNFSRGWTDRMASNLLLGA 521766 + F + R+ + NL WP F +GW R+A NL A Sbjct: 122 MLALLFNSARMMFYTNLPTWPTFGKGWARRVAGNLKYAA 160 >ref|YP_006950.1|DNA polymerase Length = 855 Score = 164 bits (416), Expect = 3e-38 Identities = 151/589 (25%), Positives = 267/589 (45%), Gaps = 57/589 (9%) Frame = -2 Query: 3131284 SFDTETTSLDPMIAQIVGLSLSVEAGRAAYVPLAHRGPDAPVQLPRDEVLARLKPWLESA 3131105 +FD+ET++L ++G+S+S + + Y+ D ++ + L+ L+S Sbjct: 162 AFDSETSALYCRDGYLLGVSISHQEYQGVYID-----SDCLTEV----AVYYLQKILDSE 212 Query: 3131104 GHKKVGQHLKYDEQVLANY-GIEMRGIE-----HDTLLQSYVVESHR-THDMDSLALRHL 3130946 H V +LK+D + G+ HDT+LQ YV++ R TH + SLA+++ Sbjct: 213 NHTIVFHNLKFDMHFYKYHLGLTFDKAHKERRLHDTMLQHYVLDERRGTHGLKSLAMKYT 272 Query: 3130945 GVKTIKYEEVAGKG---------AGQIGFDXXXXXXXXXXXXXXXDITLRLHQVLYPQVA 3130793 + +E K +D D T+RLH P++ Sbjct: 273 DMGDYDFELDKFKDDYCKAHKIKKEDFTYDLIPFDIMWPYAAKDTDATIRLHNFFLPKIE 332 Query: 3130792 AEKTLQYVYHDIELPTSRVLRKMERTGVLIDSEKLRQQSSEIATRLIQLESEAYVLA--- 3130622 + L +Y+D+ +P L+++E GV I ++L++ ++ L + + Y Sbjct: 333 KNEKLCSLYYDVLMPGCVFLQRVEDRGVPISIDRLKEAQYQLTHNLNKAREKLYTYPEVK 392 Query: 3130621 ------GGEFNLGSPKQIGQIFFEKLEL-PVVKKTPSGAPSTDEEVLQKLAEDFPLPKIL 3130463 FN S KQ+ + F+ + L P K T +GA STD E L +LA P+ K L Sbjct: 393 QLEQDQNEAFNPNSVKQLRVLLFDYVGLTPTGKLTDTGADSTDAEALNELATQHPIAKTL 452 Query: 3130462 LEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLASNDP-NLQNIPVRTGEG 3130286 LE R L+KL STY +K+ ++A G + T + + + +GRL+S+ NLQ +P + Sbjct: 453 LEIRKLTKLISTYVEKILLSIDA-DGCIRTGFHEHMTTSGRLSSSGKLNLQQLP---RDE 508 Query: 3130285 RRIREAFIAPAGHKLVSADYSQIELRIMAHISGDESLLHSF-------SQGEDIHRATAA 3130127 I+ +AP G+++++ D + E+ A +SGD ++ F + D H A Sbjct: 509 SIIKGCVVAPPGYRVIAWDLTTAEVYYAAVLSGDRNMQQVFINMRNEPDKYPDFHSNIAH 568 Query: 3130126 EIFSV--TPLEVSN---DQRRVAKVINFGLIYGMSSFGLASNLG---------------- 3130010 +F + P +V R+ AK I FG++YG +A ++ Sbjct: 569 MVFKLQCEPRDVKKLFPALRQAAKAITFGILYGSGPAKVAHSVNEALLEQAAKTGEPFVE 628 Query: 3130009 ITRDAAKLYIDRYFARYPGVARYMDETRVSAKAKGYVETVFGRRLWLPEINGGNGPRRQA 3129830 T AK YI+ YF ++P + R++D+ K G++ + FGR+ L I+ + + Sbjct: 629 CTVADAKEYIETYFGQFPQLKRWIDKCHDQIKNHGFIYSHFGRKRRLHNIHSEDRGVQGE 688 Query: 3129829 AERAAINAPMQGTAADLIKLSMIAVQKWIEESKIGTRM--IMQVHDELI 3129689 R+ NA +Q ++D + L + I + M +M VHD ++ Sbjct: 689 EIRSGFNAIIQSASSDSLLLGAVDADNEIISLGLEQEMKIVMLVHDSVV 737 >ref|NP_859396.1|hypothetical protein Length = 296 Score = 162 bits (410), Expect = 1e-37 Identities = 98/280 (35%), Positives = 149/280 (53%), Gaps = 1/280 (0%) Frame = -1 Query: 688688 QWPVSLTCQVLGVSPSGY-HXXXXXXXXXXXXXXRISNDALLVHIKAVHAESKGEYGWPR 688512 Q+ V C L ++PS Y H +D L I+ V+ E+ YG + Sbjct: 11 QYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQVYGVRK 70 Query: 688511 VWKKLLAQGIRVSKDRVQQLMKLHGIRAKTKRRFKVTTDSNHSLPVAPDLLQRDFSPARP 688332 VW++LL +GIRV++ V +LM + G+ A R KV T + A D + R F RP Sbjct: 71 VWRQLLREGIRVARCTVARLMAVMGL-AGVLRGKKVRTTISRKAVAAGDRVNRQFVAERP 129 Query: 688331 DQVWTTDITYIWTDEGWLFLTVILDLFSRQVVGWSMQPHMRTELVSDALRMAWFRRRPEA 688152 DQ+W D TY+ T +G++++ I+D+F+ +VGW + M T V DAL A + RRP + Sbjct: 130 DQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRP-S 188 Query: 688151 GLIVHSDRGSQYCSRDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLKRARILGQRFA 687972 G I HSD+GSQY S + + LK G+ +S G+ +DNA ES+ G K I + + Sbjct: 189 GTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWK 248 Query: 687971 TRREAMDEVIDWLSFYNHSRLHSTLGYVSPMQFERDWYAA 687852 R E + W+ +YN+ RL LG+ P + E+ +YA+ Sbjct: 249 NRAEVELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYAS 288 Score = 162 bits (410), Expect = 1e-37 Identities = 98/280 (35%), Positives = 149/280 (53%), Gaps = 1/280 (0%) Frame = -2 Query: 125587 QWPVSLTCQVLGVSPSGY-HXXXXXXXXXXXXXXRISNDALLVHIKAVHAESKGEYGWPR 125411 Q+ V C L ++PS Y H +D L I+ V+ E+ YG + Sbjct: 11 QYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQVYGVRK 70 Query: 125410 VWKKLLAQGIRVSKDRVQQLMKLHGIRAKTKRRFKVTTDSNHSLPVAPDLLQRDFSPARP 125231 VW++LL +GIRV++ V +LM + G+ A R KV T + A D + R F RP Sbjct: 71 VWRQLLREGIRVARCTVARLMAVMGL-AGVLRGKKVRTTISRKAVAAGDRVNRQFVAERP 129 Query: 125230 DQVWTTDITYIWTDEGWLFLTVILDLFSRQVVGWSMQPHMRTELVSDALRMAWFRRRPEA 125051 DQ+W D TY+ T +G++++ I+D+F+ +VGW + M T V DAL A + RRP + Sbjct: 130 DQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRP-S 188 Query: 125050 GLIVHSDRGSQYCSRDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLKRARILGQRFA 124871 G I HSD+GSQY S + + LK G+ +S G+ +DNA ES+ G K I + + Sbjct: 189 GTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWK 248 Query: 124870 TRREAMDEVIDWLSFYNHSRLHSTLGYVSPMQFERDWYAA 124751 R E + W+ +YN+ RL LG+ P + E+ +YA+ Sbjct: 249 NRAEVELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYAS 288 >ref|NP_852498.1|DNA polymerase I Length = 802 Score = 161 bits (408), Expect = 2e-37 Identities = 176/669 (26%), Positives = 270/669 (40%), Gaps = 102/669 (15%) Frame = -2 Query: 3131266 TSLDPMIAQIVGLSLSVEAGRAAYVPLAHR-GPDAPVQLPRDEVLARLKPWLESAGHK-- 3131096 T LDP +I +SLS A + VP++H+ G + RDE + L+ K Sbjct: 128 TPLDPWKGEICTVSLSAAAHESRVVPISHKVGQVFEPSMDRDEARKLVLDLLDEYLFKNE 187 Query: 3131095 ---KVGQHLKYDEQVLANYGIEMRGIEHDTL------LQSYVVESHRTHDMDSL------ 3130961 K+ +L ++ + A YG + G D L LQ + + Sbjct: 188 KVLKIAVNLSFETKYAAKYGKYILGKVADPLIMWVRCLQIAAPQKINNPKKPTSGWGLKP 247 Query: 3130960 ALRHL-GVKTIKYEEVAGKGAGQIGFDXXXXXXXXXXXXXXXDITLRLHQVLYPQVAAE- 3130787 A +H+ GV + + K + H + Q+AA+ Sbjct: 248 ATKHIFGVTMNDFSALLKKYKVNFFDEIDASKGEGLLYSAEDSDYAVQHYEYWSQIAAQI 307 Query: 3130786 KTLQYVYHDIELPTSRVLRKMERTGVLIDSEKLRQQSSEI-------ATRLIQLESEAYV 3130628 + H IE+P +RV+ ME G+ D Q+ E A R+ Q+ E + Sbjct: 308 SRYEEWLHKIEMPFTRVIGLMEYWGMNWDPNLATQKKQEAEIMQEQAAERIKQIAKETFN 367 Query: 3130627 LAGGEFNLGSPKQIGQIFFEKLELPVVKKTPSGAPSTDEEVLQKLA-------------- 3130490 + G ++ + F+ L++P+ K +GA S D+E L +A Sbjct: 368 IDINTGKSGKTNEVKSLMFDYLKIPIAKYGKTGA-SLDQEALIDMAFMLENKLNDIDEEK 426 Query: 3130489 ----------------------------------EDFPLPKILLEHRGLSKLKSTYTDKL 3130412 E P + LE K YT L Sbjct: 427 YLGVSLPENWENIDPEKDPTLDKLERGAIRIAKREPHPYKEQALEVIDQLKKIQKYTTLL 486 Query: 3130411 P-------RMVNATTGRVHTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPA 3130253 + +N +GR+H Y+ TGRL S +PN QN+P + +IR F+ Sbjct: 487 SSHIIGREKYLNFMSGRIHAGYSPFTE-TGRLNSFNPNGQNVPRPDNDEFKIRNFFVPKP 545 Query: 3130252 GHKLVSADYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVA 3130073 G L D+S ELR+MA SGDE + F+ G D+HR TA+ + + E+ +R A Sbjct: 546 GKILFFIDFSGFELRLMAWKSGDEVMTELFNTGGDMHRRTASVMTGKSEAEIVKKERTDA 605 Query: 3130072 KVINFGLIYGMSSFGLASN------LGITRDAAKLYIDRYFARYPGVARYMDETRVSAKA 3129911 K NFG+ YG + L + T D ++ Y + Y + + A+ Sbjct: 606 KAGNFGISYGGTEHALQFTFKTKYMIRKTLDECAQIVNAVKTAYKRIPEYQRKIVLEARE 665 Query: 3129910 KGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESK 3129731 +GYV+T++G LP IN N R +AER A N P+QG+AAD++K VQ I ES Sbjct: 666 QGYVQTIYGYMRLLPGINSANRRDRGSAERQAANTPVQGSAADIMK----KVQNEIYES- 720 Query: 3129730 IGTR----------MIMQVHDELILEVPDAE--LSDVRKRLPELM--CGVADLKVPLVAE 3129593 IG + MI Q+HDE+I E+ D + V K++ ++M V VP+ AE Sbjct: 721 IGKQEGVLSHGSADMIAQIHDEIIFEIDDDPEIVVAVEKQIKQVMEQPPVPGFPVPIEAE 780 Query: 3129592 VGAGLNWEE 3129566 G W E Sbjct: 781 GSVGYRWGE 789 >ref|NP_958229.1|gene 55 protein Length = 306 Score = 155 bits (391), Expect = 2e-35 Identities = 94/283 (33%), Positives = 139/283 (49%), Gaps = 3/283 (1%) Frame = -1 Query: 688685 WPVSLTCQVLGVSPSGYHXXXXXXXXXXXXXXRISNDALLVHIKAVHAESKGEYGWPRVW 688506 +PV C V GV S Y + + L +H S G G + Sbjct: 26 YPVVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVL-----ELHGISHGSAGARSIA 80 Query: 688505 KKLLAQGIRVSKDRVQQLMKLHGIRA--KTKRRFKVTTDSNHSLPVAPDLLQRDFSPARP 688332 +G ++ + +LMK G+ + + R+K H P+ L+R F+ P Sbjct: 81 TMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYK---RGGHEHVAIPNYLERQFAVTEP 137 Query: 688331 DQVWTTDITYIWTDEGWLFLTVILDLFSRQVVGWSMQPHMRTELVSDALRMAWFRRRPEA 688152 +QVW D+TYIWT + W +L V+LDLF+R+ VGW+M + L AL MAW R Sbjct: 138 NQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPG 197 Query: 688151 GLIVHSDRGSQYCSRDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLKRARILGQRFA 687972 G++ HSD+GS Y SR F+ LL Y +R SMSRRGNCWDN+P E + SLK + + Sbjct: 198 GVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYV 257 Query: 687971 TRREAMDEVIDWL-SFYNHSRLHSTLGYVSPMQFERDWYAAQN 687846 + EA + D++ +Y+ R H G + P + E ++ N Sbjct: 258 SFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSN 300 Score = 155 bits (391), Expect = 2e-35 Identities = 94/283 (33%), Positives = 139/283 (49%), Gaps = 3/283 (1%) Frame = -2 Query: 125584 WPVSLTCQVLGVSPSGYHXXXXXXXXXXXXXXRISNDALLVHIKAVHAESKGEYGWPRVW 125405 +PV C V GV S Y + + L +H S G G + Sbjct: 26 YPVVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVL-----ELHGISHGSAGARSIA 80 Query: 125404 KKLLAQGIRVSKDRVQQLMKLHGIRA--KTKRRFKVTTDSNHSLPVAPDLLQRDFSPARP 125231 +G ++ + +LMK G+ + + R+K H P+ L+R F+ P Sbjct: 81 TMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYK---RGGHEHVAIPNYLERQFAVTEP 137 Query: 125230 DQVWTTDITYIWTDEGWLFLTVILDLFSRQVVGWSMQPHMRTELVSDALRMAWFRRRPEA 125051 +QVW D+TYIWT + W +L V+LDLF+R+ VGW+M + L AL MAW R Sbjct: 138 NQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPG 197 Query: 125050 GLIVHSDRGSQYCSRDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLKRARILGQRFA 124871 G++ HSD+GS Y SR F+ LL Y +R SMSRRGNCWDN+P E + SLK + + Sbjct: 198 GVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYV 257 Query: 124870 TRREAMDEVIDWL-SFYNHSRLHSTLGYVSPMQFERDWYAAQN 124745 + EA + D++ +Y+ R H G + P + E ++ N Sbjct: 258 SFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSN 300 >ref|YP_024516.1|putative DNA polymerase Length = 1072 Score = 149 bits (377), Expect = 9e-34 Identities = 85/322 (26%), Positives = 167/322 (51%), Gaps = 18/322 (5%) Frame = -2 Query: 3130477 LPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLASNDPNLQNIPVR 3130298 L ++L H + ++++T KL M+N +H ++++ T RL+S++PNLQN+P Sbjct: 692 LLELLKYHASMQTKRNSFTKKLLNMINKQKRTLHGSFSETGTETSRLSSSNPNLQNLPAH 751 Query: 3130297 TGEGRR------IREAFIAPAGHK-LVSADYSQIELRIMAHISGDESLLHSFSQGEDIHR 3130139 T + + I+ +F++ + L+ +DYS +E+RI+ + D +L SF GEDIH+ Sbjct: 752 TSDVNKFDYKHPIKRSFVSRFENGVLLGSDYSALEMRIIGLFTKDPDMLQSFLNGEDIHK 811 Query: 3130138 ATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARY 3129959 ATA+ +++ EV+ ++R+ K +NFGL +G S F A + A+ ++YF Sbjct: 812 ATASIVYNKPVEEVTKEERQATKAVNFGLAFGESPFSFAGKNNMEVSEAEEIFEKYFQTK 871 Query: 3129958 PGVARYMDETRVSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL 3129779 P V +D + GYV+T+ G R ++ + + R + N +QG+ + L Sbjct: 872 PSVKTSIDNVHEFVQQYGYVDTMHGHRRFIRSAQSTDKKIKNEGLRQSFNTIIQGSGSFL 931 Query: 3129778 IKLSMIAVQKWIEESKIGTRMIMQVHDELILEVPDAELSDVRKRLPELMCGV-------- 3129623 +S+ + +I+ + +++I VHD ++++ P E + K +M + Sbjct: 932 TNMSLTYLDDFIQSRNLKSKVIATVHDSILIDCPPEEAKIMAKVTIHIMENLPFDFLKAE 991 Query: 3129622 ---ADLKVPLVAEVGAGLNWEE 3129566 +++ P+ A++ GLN+ + Sbjct: 992 IDGKEVQYPIEADMEIGLNYND 1013 >ref|YP_025041.1|putative transposase B Length = 280 Score = 144 bits (363), Expect = 4e-32 Identities = 96/276 (34%), Positives = 145/276 (52%), Gaps = 10/276 (3%) Frame = -1 Query: 688667 CQVLGVSPSGYHXXXXXXXXXXXXXXRISNDA-LLVHIKAVHAESKGEYGWPRVWKKLLA 688491 C++LGVS + Y+ + DA L I + AE K YG ++ +L Sbjct: 2 CRILGVSRAQYYRYRSPKPSKRR-----AEDADLKQRILRIFAEFKQRYGVMKIHHELNL 56 Query: 688490 Q----GIRVSKDRVQQLMKLHGIRAKTKRRFKVTTDSNHSLPVAPDLLQRDFSPARPDQV 688323 + +R S R+ +LMK I + T ++K + S + P+LL++DFS +Q Sbjct: 57 ELQPLQLRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQK 116 Query: 688322 WTTDITYIWTDE-GWLFLTVILDLFSRQVVGWSMQPHMRTELVSDALRMAWFRRRPEAGL 688146 WT D+TYI T GW +L+ I+DL SR+++G+S M T+LV L A R L Sbjct: 117 WTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDL 176 Query: 688145 IVHSDRGSQYCSRDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLKRARI----LGQR 687978 I+H+D GSQY S D+ L +R S SR+G +DNAP ES SLK+ + + + Sbjct: 177 IIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFED 236 Query: 687977 FATRREAMDEVIDWLSFYNHSRLHSTLGYVSPMQFE 687870 + T + E + +FYN R+HS+LGY +P+Q E Sbjct: 237 YETAAAVLFEYVH--AFYNRKRIHSSLGYQTPLQVE 270 Score = 144 bits (363), Expect = 4e-32 Identities = 96/276 (34%), Positives = 145/276 (52%), Gaps = 10/276 (3%) Frame = -2 Query: 125566 CQVLGVSPSGYHXXXXXXXXXXXXXXRISNDA-LLVHIKAVHAESKGEYGWPRVWKKLLA 125390 C++LGVS + Y+ + DA L I + AE K YG ++ +L Sbjct: 2 CRILGVSRAQYYRYRSPKPSKRR-----AEDADLKQRILRIFAEFKQRYGVMKIHHELNL 56 Query: 125389 Q----GIRVSKDRVQQLMKLHGIRAKTKRRFKVTTDSNHSLPVAPDLLQRDFSPARPDQV 125222 + +R S R+ +LMK I + T ++K + S + P+LL++DFS +Q Sbjct: 57 ELQPLQLRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQK 116 Query: 125221 WTTDITYIWTDE-GWLFLTVILDLFSRQVVGWSMQPHMRTELVSDALRMAWFRRRPEAGL 125045 WT D+TYI T GW +L+ I+DL SR+++G+S M T+LV L A R L Sbjct: 117 WTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDL 176 Query: 125044 IVHSDRGSQYCSRDFQDLLKGYGMRSSMSRRGNCWDNAPTESLWGSLKRARI----LGQR 124877 I+H+D GSQY S D+ L +R S SR+G +DNAP ES SLK+ + + + Sbjct: 177 IIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFED 236 Query: 124876 FATRREAMDEVIDWLSFYNHSRLHSTLGYVSPMQFE 124769 + T + E + +FYN R+HS+LGY +P+Q E Sbjct: 237 YETAAAVLFEYVH--AFYNRKRIHSSLGYQTPLQVE 270 >ref|NP_817633.1|gp44 Length = 604 Score = 139 bits (351), Expect = 1e-30 Identities = 109/402 (27%), Positives = 190/402 (47%), Gaps = 1/402 (0%) Frame = -2 Query: 3130834 ITLRLHQVLYPQVAAEKTLQYVYHDIELPTSRVLRKMERTGVLIDSEKLRQQSSEIATRL 3130655 + RL Q L P V A Y E + + MER G L+D E + S ++ + Sbjct: 198 LAARLLQKLIPLVPAVSQDLVPY---EHKLAEICSYMERRGFLLDVEYSEKLSEDMLRKQ 254 Query: 3130654 IQLESEAYVLAGGEFNLGSPKQIGQIFFEKLELPVVKKTPSGAPSTDEEVLQKLA-EDFP 3130478 S+A +L G E N+ SP Q+ + + + + ++T +G P D+ +L +L E P Sbjct: 255 DYWASKADILYGLE-NVNSPIQVAEALMRR-GVKIKERTETGQPKVDKVLLDRLIKEGDP 312 Query: 3130477 LPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLASNDPNLQNIPVR 3130298 L + + E + K + T+ K ++ R H N A T R++ Q +P Sbjct: 313 LAEAITEAKKWGKWEKTWVRKFLDSRDSKD-RCHANINPLQARTARMSITGIPAQTLP-- 369 Query: 3130297 TGEGRRIREAFIAPAGHKLVSADYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIF 3130118 +G+ +R F+A G + S DY ELR++A +SGD +++ +F G D+H TA + Sbjct: 370 SGDWL-VRRCFLADEGQLMASVDYQAQELRVLAALSGDRTMIQAFKDGADLHLMTARAAW 428 Query: 3130117 SVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYM 3129938 + + +R+ AK +NFG +YG + +A G+ +AAK +D + YPGV R Sbjct: 429 PDREITKDSPERKYAKTVNFGRVYGGGAKTVAEQTGLDMEAAKQVVDGFDRAYPGVQRLS 488 Query: 3129937 DETRVSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIA 3129758 + + A G++ T GRRL P + +A+N +Q T+ D+ ++I Sbjct: 489 AKLQREASQNGHIVTPKGRRL----------PVDPSRAYSALNYLIQSTSRDVTGEALIR 538 Query: 3129757 VQKWIEESKIGTRMIMQVHDELILEVPDAELSDVRKRLPELM 3129632 + E+ + + +HDE++ VP+ + + + LM Sbjct: 539 ----LHEAGFTKYLRLPIHDEILASVPEDKAQWGAQEIARLM 576 >ref|NP_061653.1|transposase Length = 328 Score = 138 bits (347), Expect = 3e-30 Identities = 103/314 (32%), Positives = 148/314 (47%), Gaps = 3/314 (0%) Frame = -1 Query: 50930 ERLIIASLHLQGSSIRAMARILGRSPATVSRELTRNSSPAGYGSVPXXXXXXXXXXXXXR 50751 ER I L + S+R++AR L RS +T+SRE++RN+ Y + R Sbjct: 23 ERARIEVLRQENYSLRSIARKLKRSVSTISREISRNNLNQSYQAETAQKNYETKRKLCGR 82 Query: 50750 PTELCLQSVCWRIVLTLLEWKWLPQQISGTLKLMYPTDPTRQVSHETIYTAIYAQPRGEL 50571 PT + I+ L+ W P+QI G L Q+ +TIY I + + Sbjct: 83 PTRFTPE--LGNIIKYYLKCHWSPEQIVGRLL-------QNQICFKTIYRWINSNM---I 130 Query: 50570 RRQLIACPRHGHSTRMPR-TRGTDRRGQIPDMVSIHVRPPEIEDRLLPGHSEGDFIKGAG 50394 +LI+C R + P+ TRG G+ I RP EI+ R GH E D I + Sbjct: 131 NFELISCLRQKGKRQKPKETRGKFNIGR-----PISQRPKEIKKRNTFGHWEADTIVSSR 185 Query: 50393 NQSS--VGVLVERTSRLVLLAKMEDXXXXXXXXXXXAKLNSIAEPLRQSFTYDQGKEMSR 50220 +S + ER SR M D + + + ++ T D+GKE S Sbjct: 186 GKSKGCIATFAERKSRYYYCVLMPDRSSNSMETAINNLIKHLPKGAVKTITVDRGKEFSC 245 Query: 50219 HQEFTAATGVKVYFCDPHSPWQRGTCENTNGLLRQYLPKGTDLSVYRQDELDAIADSLNS 50040 +Q + VYF DP+S WQRGT ENTNGLLR++ PK TDL+ Q++L+ DS+N Sbjct: 246 YQNIENQFNINVYFADPYSAWQRGTNENTNGLLREFFPKKTDLAKVNQEQLNYALDSINY 305 Query: 50039 RPRATHAFHSPFEV 49998 RPR + P+EV Sbjct: 306 RPRKCLNWKFPYEV 319 >ref|NP_945089.1|gp58 Length = 297 Score = 127 bits (319), Expect = 5e-27 Identities = 88/293 (30%), Positives = 134/293 (45%), Gaps = 3/293 (1%) Frame = +2 Query: 1723412 LPPMQALTMFEXXXXXXXXXXXXXELGSTQPAVSQRVVQLEEALGTPLFERGHRGVTLTE 1723591 LPP+Q L F+ EL Q AVS++VV+LE LGT LF R + + LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 1723592 DGLRLFEAVRHALDTIRLATTEIRARRTPQTLTLSTDFGFATYWLMPRLSQFKALMPDVD 1723771 G + + V L AT + +TP +LT++ G AT +L R+++F A P+V Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 1723772 VKIITSQNVFDPSHDQADIAIAFGDEHADWSARGALKLFPERVTPVCSPAFVAARPSXXX 1723951 V+I+ + VF+ + + DI + + + G + E V C+P F+A R Sbjct: 126 VRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGT-AIVAEDVHAYCAPTFLAGR---RV 181 Query: 1723952 XXXXXXXXXXXXXXTQPARWLSWADWF-XXXXXXXXXXHRGITFNSFTLVAHAAIMGQGV 1724128 Q +W+ W DWF R I+ NS+ ++ A+ G G Sbjct: 182 PPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGA 241 Query: 1724129 ALGWAPLVDELLATGQLVELFDPPVVTERGYMLV--TQRTATPAVNAFRQWLL 1724281 LGW ++ L+ +G+LV D Y ++ R TPAV FR+WLL Sbjct: 242 ILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 114 bits (285), Expect = 4e-23 Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 13/296 (4%) Frame = -1 Query: 513914 MRPYLPLNALRAFESSARHLSFTRAALELNVTQAAVSQQVRTLEERLGTALFKRLPRGLA 513735 ++P PL L F+++ARH +FTRAA ELNV Q AVS+QV LE LGT LF R + L Sbjct: 3 IQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALH 62 Query: 513734 MTDEGL----ALRPVLTDAFDRIEAVLKQFEGGHFHEVLTVGVVGTFAVGWLMPRLKSFR 513567 +T G + +L D + V+K+ LT+ A +L R+ F Sbjct: 63 LTRAGQQYADRVHAILADCVEATALVMKE----QTPHSLTIACASGTATLFLADRIAEFS 118 Query: 513566 DAHPFVELRLLTNNNLVDLATEGLDFAIRF-GDGTWPGSLASRLLDAPLALLCTPE-IAA 513393 HP V +R+L + +L D + + D PG + ++ + C P +A Sbjct: 119 AEHPEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAG 178 Query: 513392 RLSKPEDLANETLL-RSYRADDWMSW-----FAAAGIPPRPIRGPVFDSSRLMVEAAMQG 513231 R P+DL TLL + WM W I RP R +S ++++ A+ G Sbjct: 179 RRVPPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHG 238 Query: 513230 AGIALAPALMFDHEINTGRLVRPFEVEV-HAGSYWLTWLKGKPMTPAMLLFNQWII 513066 G L M + +G+LV + G+Y + W + TPA+ +F +W++ Sbjct: 239 HGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 112 bits (280), Expect = 2e-22 Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 5/284 (1%) Frame = -3 Query: 1049502 FFEAAGRHQSFKLAAAELNVTPSAISHGIVGLEQALGVELFVREPRGISLTASGADYLSY 1049323 FF+AA RH +F AA ELNV A+S +V LE LG LFVR+ + + LT +G Y Sbjct: 14 FFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADR 73 Query: 1049322 VSEAFSLIAIGTQRLPNHRADRPIALSCAPTFASRWLLPRLAGFRARWPNVNVSVDTSHR 1049143 V + T + + + ++CA A+ +L R+A F A P V+V + Sbjct: 74 VHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVREG 133 Query: 1049142 QVGFPVDGFDFAIRLSR-APVAGTAWTRLFGERFVPVCSPAYLETLRDGHGNADLRRATL 1048966 FD + R P G A T + E C+P +L R DL ATL Sbjct: 134 VFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRR--VPPQDLMEATL 191 Query: 1048965 IHVNAASEDWQAWLD----ATGIEGFDTTGGLRVDTIQLAFEAAGMGLGVALGRRPLVDP 1048798 + W W D G GF + ++ + + A G G LG + ++ P Sbjct: 192 LVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILGWKHMITP 251 Query: 1048797 DLDRGALVEADPATIASTTAYWLVSAENGDRRPELADFKRWLVS 1048666 ++ G LV A A + AY ++ + P + F+ WL++ Sbjct: 252 LVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLLT 295 Score = 111 bits (277), Expect = 4e-22 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 8/293 (2%) Frame = +3 Query: 3066810 IPNMGALLAFEAAARHESFTHAARELFLTESAVSRQINTLESNLGVRLFVRVKQRVMLTR 3066989 +P + L+ F+AAARH +FT AA EL + + AVS+Q+ LE+ LG LFVR + + LTR Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 3066990 AGKVYSAQVRRSLEQLDRDTLSIIAHGSGGGYLELAVLPTFASQWLIPRLAAFNAQYPDV 3067169 AG+ Y+ +V L T ++ + L +A A+ +L R+A F+A++P+V Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHS-LTIACASGTATLFLADRIAEFSAEHPEV 124 Query: 3067170 RVNMGVRTGTFPFAETHFEAAIHYGKPT-WPGTSADFLFSEEVVPVCAASLLKRPVQSAA 3067346 V + VR G F F+ ++Y + PG + + +E+V CA + L Sbjct: 125 SVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVPPQ 184 Query: 3067347 DLLDYPLVHSTTRPD---GWAAWF----ANMGIDDNRTMQGVRYELHTMXXXXXXXXXXX 3067505 DL++ L+ + + GW WF +G RT+ Y + Sbjct: 185 DLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILG 244 Query: 3067506 XXVPRFFVDAQLEQLGLVIPLDAPVVADSAYYLVYPTELSHGKPLASFREWLL 3067664 + + +E LV+ DA AY +++P + + FREWLL Sbjct: 245 W---KHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 103 bits (258), Expect = 6e-20 Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 5/294 (1%) Frame = +3 Query: 2361051 LPSLNALRAFESAARNQSMTRAAEELCVTHSAISRHVAKLEDYLNAKLFERGHQQVVLTK 2361230 LP L L F++AAR+ + TRAAEEL V A+S+ V KLE +L LF R + + LT+ Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 2361231 RGAAYASRLQVLFDQIQDVTAEYFYARPDNASLRIGVLSTFAMRFLIPRLARFKKLYPEI 2361410 G YA R+ + + TA + + SL I S A FL R+A F +PE+ Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPH-SLTIACASGTATLFLADRIAEFSAEHPEV 124 Query: 2361411 TLQVESAHEHVSPRDEEVDVAIWF-GNGDWPGLVSEHLFHEELVPVGSPTLLAGHELGNP 2361587 ++++ + E D+ +++ + PG+ + E++ +PT LAG + P Sbjct: 125 SVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRV-PP 183 Query: 2361588 DDLESFLLLHAAARHDDWQRWLS----ATGATRVDGYKGLKLEYSGLAYQGAVDGLGLAM 2361755 DL LL A + W W G + + + Q A+ G G + Sbjct: 184 QDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAIL 243 Query: 2361756 AQTLFVQEDLANRRLVAALPQRVKTGRSYYLVHNEMKSEQPVILRFSEWLKDEV 2361917 + + + +LV A G +Y ++ + + P + F EWL V Sbjct: 244 GWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLLTHV 297 Score = 98.6 bits (244), Expect = 2e-18 Identities = 81/299 (27%), Positives = 122/299 (40%), Gaps = 8/299 (2%) Frame = -1 Query: 1849685 LPPLNALQIFETVARHRSFTRAADHLCLTQGAVSRQIIALEDYYKFPLFKRHAKXXXXXX 1849506 LPPL L F+ ARH +FTRAA+ L + QGAVS+Q++ LE + LF R AK Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 1849505 XXXXXXXAVKESFARIEEISLRLTRQRTDLALKVPTC---VMRWMLPKIMRFQAEYPELH 1849335 V A E + + +++T +L + ++ +I F AE+PE+ Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 1849334 VQITTTWQHDVDFQLEPFDAAIIY-GSSPGADVQAVPLFEERLTPVCAPDLLKDKPLAEL 1849158 V+I + + FD + Y P + + E + CAP L + + Sbjct: 126 VRILVR-EGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVPP- 183 Query: 1849157 ADLARHTLLHPTRDHRDWKMW----LARVTEMGAANAPVIDAEHGPSFDTLDMATNAALQ 1848990 DL TLL R W W V E+G A I A P + AL Sbjct: 184 QDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYP------VLLQLALH 237 Query: 1848989 GFGVAISDLALIDEDVAAKRLVRPFDTVLKTGWRYYFVYPDSVAHQQKLNLFRDWIAAH 1848813 G G + +I V + +LV D G Y ++P + +FR+W+ H Sbjct: 238 GHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLLTH 296 Score = 91.7 bits (226), Expect = 3e-16 Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 5/290 (1%) Frame = +3 Query: 1642086 LPSANALFVFEAAARCGNFTRAAQELYVSQPAVSRMLSRMEDHLGVRLFERVRGGIELTE 1642265 LP L F+AAAR GNFTRAA+EL V+Q AVS+ + ++E LG LF R + LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 1642266 NGRILYRKISEGFNGIESAIREIEARATGVESVTLSVSTAFTTHWLMPRMSRLNQAFPNV 1642445 G+ ++ A + T S+T++ ++ T +L R++ + P V Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQT-PHSLTIACASGTATLFLADRIAEFSAEHPEV 124 Query: 1642446 DLRFQLISGRIGGPLVDVDLGMRFLRE-DEIGENSVLVMPETLLPVCNRRYHEAAATEAG 1642622 +R + G + D+G+ ++R+ G ++ E + C + Sbjct: 125 SVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVPPQ 184 Query: 1642623 RKHGDTVIVMDDGER---GWHDXXXXXXXXXXXXXS-MLNFNDYAIVVQAALLGQGVALG 1642790 T++V ++ +R GW D + ++ N Y +++Q AL G G LG Sbjct: 185 DLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILG 244 Query: 1642791 WLNVVSHWXXXXXXXXXXXXXIVTNRRCCLVWPENRPLRPVAADVRDWIL 1642940 W ++++ ++WP +R P R+W+L Sbjct: 245 WKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 84.3 bits (207), Expect = 5e-14 Identities = 73/291 (25%), Positives = 117/291 (40%), Gaps = 4/291 (1%) Frame = -3 Query: 1108662 LPPLAALKAFESAARHRSFTKAAQELFVTQSAISRHVRHLEQLFGIPLFYRDHRAVTLTP 1108483 LPPL L F++AARH +FT+AA+EL V Q A+S+ V LE G LF RD +A+ LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 1108482 EGEAYMYEVVEAFSRIDLATRRLKVSGRQNILNLQAYSTFAMYWLIPRLGKFQQINPEID 1108303 G+ Y V + AT + + L + S A +L R+ +F +PE+ Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 1108302 VRLTASTAPLDFDHTDIHASIRTVNGPLEDDLRGDKLFDYRLIAVGAPAALSSQPPLREP 1108123 VR+ + + + + + + G + + A AP L+ + P Sbjct: 126 VRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRV--PP 183 Query: 1108122 GDLKSAMLLHSMARPEDWGVWLN----AVGANDVPLERGLRFESSAMVYXXXXXXXXXXX 1107955 DL A LL + + W W + VG R + S ++ Sbjct: 184 QDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAIL 243 Query: 1107954 XQSFLIQEELQKGFLTKVFPYEVPSERTYYLLSSPRHVGDVALELFRKWLL 1107802 +I ++ G L Y ++ A+ +FR+WLL Sbjct: 244 GWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 75.1 bits (183), Expect = 3e-11 Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 10/297 (3%) Frame = -3 Query: 2654811 LRQLQIFVVASRYTSFARAAEELHLTQPAVSMQIHQLEEAVGLRLFERIARKLALTEAGE 2654632 L+ L F A+R+ +F RAAEEL++ Q AVS Q+ +LE +G LF R A+ L LT AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 2654631 MLSHHASRILGEIKDAEDAMTSLKQADSGSIAVGIVS-SATYFAPKLLAMYSHLYPKVDV 2654455 + IL + +A + +K+ S+ + S +AT F +A +S +P+V V Sbjct: 69 QYADRVHAILADCVEATALV--MKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 2654454 HFSVGNRDALLRLLQDNAIDLAIMGRXXXXXXXXXXXLAWHPQVVIAPLDHPLC-----G 2654290 V R+ + L NA + I ++A H C Sbjct: 127 RILV--REGVFNL---NAAEFDI----GVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLA 177 Query: 2654289 ARRFDLQELRGDTFLLREPGSGTRMAAEEMFRQHL----FTPAKVVTLGSNETIKQAVMA 2654122 RR Q+L T L+ E M + FR + F PA+ ++ S + Q + Sbjct: 178 GRRVPPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALH 237 Query: 2654121 GMGVSXXXXXXXXXXLRTKEIALLDVNGTPIERTWQVVHLRAKQLSPTCSAFRQFLL 2653951 G G + + ++ L +QV+ ++ +P + FR++LL Sbjct: 238 GHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 74.7 bits (182), Expect = 4e-11 Identities = 43/141 (30%), Positives = 69/141 (48%) Frame = -1 Query: 2979959 IPPLKAIVAFESVARTKSVNRAADELGLTPSAVSHQIANLESMVGRPLFTRLGRGLVLTP 2979780 +PPL+ +V F++ AR + RAA+EL + AVS Q+ LE+ +G LF R + L LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 2979779 TGQQYLSDVTGSLADLSRATERASSQSGMEILRIHSSPSFGLMWLLPRLASFQEANGDIQ 2979600 GQQY V LAD AT + L I + ++L R+A F + ++ Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 2979599 LNLACSYEDVSFTSGYYDVDV 2979537 + + + + +D+ V Sbjct: 126 VRILVREGVFNLNAAEFDIGV 146 Score = 72.4 bits (176), Expect = 2e-10 Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 3/288 (1%) Frame = +2 Query: 2142455 LAIFAVVARERSFTRAAARLGMSQPALSRAMRQLEERLGIRLLARTTRSVSATEAGEHLL 2142634 L F AR +FTRAA L ++Q A+S+ + +LE LG L R +++ T AG+ Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 2142635 RVVAPRFEEIDTELALLSQFRDKPAGRLRITAGEHPAVTILQPALAKILPDHPDIRVEVI 2142814 V + AL+ +++ L I A L +A+ +HP++ V ++ Sbjct: 72 DRVHAILADCVEATALV--MKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Query: 2142815 VDYGLTDIVAEGYDAGVRLGEQIAKDMIAVRIGPEVRMAVVGSPDYFARHPRPRTPRDLI 2142994 V G+ ++ A +D GV + IA + +P + A P P+DL+ Sbjct: 130 VREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP--PQDLM 187 Query: 2142995 RHNCIAI--RLPTYGGIFPWEFEKKGEELKVRVEGQLVFNNIAMRLDAALRGLGLTYMPE 2143168 + + + G W F E+ R + N+ + L AL G G + Sbjct: 188 EATLLVAEEQQRQWMGWRDW-FRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILGWK 246 Query: 2143169 DLVKAHVREGVLVRVLSDWCPPIPG-YHLYYPSRRQSSPAFTVLRDAL 2143309 ++ V G LV + SD G Y + +P+ R+ +PA T+ R+ L Sbjct: 247 HMITPLVESGKLV-LASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 72.0 bits (175), Expect = 2e-10 Identities = 72/293 (24%), Positives = 115/293 (39%), Gaps = 6/293 (2%) Frame = -2 Query: 934210 LQAMQVFTRVVDTNSFTRAAETLDLPRASVTTIIQNLEAFLGTRLMHRTTRRLSLTPDGA 934031 LQ + F +FTRAAE L++ + +V+ + LE FLGT L R + L LT G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 934030 AYYERCVRILADVEETEASFQSGNKKPHGKLRIDMPGSIGRLLVIPSLSEFHTRYPDIDL 933851 Y +R ILAD E A + PH L I L + ++EF +P++ + Sbjct: 69 QYADRVHAILADCVEATALVMK-EQTPH-SLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 933850 QLGLTDRPVDLLQEGVDCVVRV------GALQDSSLVARRIGLFEGVTCAAPDYIERAGM 933689 ++ + + +L D V + +++VA + + CA R Sbjct: 127 RILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAY----CAPTFLAGRRVP 182 Query: 933688 PSSLEDLENHKAVNYFSSRTGRTLDWAFMVDGKEIEVKMKGIVSVNDADAYVTCGLEGFG 933509 P L + A G DW F + EI + +S N + L G G Sbjct: 183 PQDLMEATLLVAEEQQRQWMG-WRDW-FRLTVGEIGFRPARTISANSYPVLLQLALHGHG 240 Query: 933508 LIQPALFMVLPHLRSGQXXXXXXXXXXXXXPISAVYPHSRHLSPKVRVFVDWI 933350 I M+ P + SG+ ++P R +P V +F +W+ Sbjct: 241 AILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 68.6 bits (166), Expect = 3e-09 Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 6/265 (2%) Frame = +3 Query: 1614321 MNALPSPDLGDLRVFCEVARKXXXXXXXXXXXXXXXXXXKRINVLETTLGTRLLHRSTRR 1614500 M P P L L F AR K++ LET LGT L R + Sbjct: 1 MKIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKA 60 Query: 1614501 VAITEAGERVYTWAEKILDDVDQLVEDVSTTRRIPGGKLRISSSFGFGRRFVAPALARFS 1614680 + +T AG++ IL D + V + L I+ + G F+A +A FS Sbjct: 61 LHLTRAGQQYADRVHAILADCVEATALVMKEQT--PHSLTIACASGTATLFLADRIAEFS 118 Query: 1614681 GRYPQLSVRLDLFDRLVDVAGEGFDLDVRIGDEIAPHLIARR--LASNHRVLCASPGYLE 1614854 +P++SVR+ + + + ++ FD+ V ++ P IA +A + CA P +L Sbjct: 119 AEHPEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCA-PTFLA 177 Query: 1614855 RHGAPRQLADLSSHACLAIKERDHPFGLW----RLTVRGETASIKVTGPLSTNHGEVAVE 1615022 P Q DL L +E+ + W RLTV GE + +S N V ++ Sbjct: 178 GRRVPPQ--DLMEATLLVAEEQQRQWMGWRDWFRLTV-GE-IGFRPARTISANSYPVLLQ 233 Query: 1615023 WALAGRGIVLRSMWDVRPLLESGQL 1615097 AL G G +L + PL+ESG+L Sbjct: 234 LALHGHGAILGWKHMITPLVESGKL 258 Score = 65.9 bits (159), Expect = 2e-08 Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 6/276 (2%) Frame = +2 Query: 1776650 ELGLSTAAVSKHLAQMESRAGVSLVNRTTRRMSLTPEGELYLTRARRILNDMDDLAQLLG 1776829 EL ++ AVSK + ++E+ G +L R + + LT G+ Y R IL D + L+ Sbjct: 30 ELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILADCVEATALVM 89 Query: 1776830 GSQAAPKGLLRVNATLGFGRSHVAPLISTFVRRFPEVDVQLQLSVDPPPFSDDAFDVCVR 1777009 Q L + G +A I+ F PEV V++ + + FD+ V Sbjct: 90 KEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSVRILVREGVFNLNAAEFDIGVY 147 Query: 1777010 F--GEPPDARVIARRVASNRRLLCASPRYLAQRRTPRSPAELAQHNCIGIRQGGDGYGLW 1777183 + PP VA + CA P +LA RR P P +L + + + + W Sbjct: 148 YIRDVPPPGIAGTAIVAEDVHAYCA-PTFLAGRRVP--PQDLMEATLLVAEEQQRQWMGW 204 Query: 1777184 R----LTSGRGAAEKTETVRVRGNLTTNDGEIAVKWALDGHGILMRAEWDIADYLADGRL 1777351 R LT G T+ + N + ++ AL GHG ++ + I + G+L Sbjct: 205 RDWFRLTVGEIGFRPARTI------SANSYPVLLQLALHGHGAILGWKHMITPLVESGKL 258 Query: 1777352 VHILPDYRTPGADIYAVYPQQLQMTARVKAFVDMLI 1777459 V + + G ++P + T V F + L+ Sbjct: 259 VLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 65.5 bits (158), Expect = 2e-08 Identities = 36/115 (31%), Positives = 61/115 (53%) Frame = -2 Query: 2025037 FVAVVETGSFTKASATVHRSQAAVSMQIKRLETMLGTTLFARNTRNLSLTRPGNTLLEYA 2024858 F A G+FT+A+ ++ +Q AVS Q+ +LET LGTTLF R+ + L LTR G + Sbjct: 15 FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRV 74 Query: 2024857 RRVLALHEEAWSAIVRPEVTGRVVLGAPDDYVSSLLSPVLRRFSNLYPHVEIEIV 2024693 +LA EA + +++ + + + + L+ + FS +P V + I+ Sbjct: 75 HAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Score = 63.9 bits (154), Expect = 7e-08 Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 3/290 (1%) Frame = +1 Query: 879517 LTAFVAIAHQRSFSAAARTLGVSPSALSHAMRGLEARLDVRLFNRTTRSVALTEAGEQLL 879696 L F A A +F+ AA L V+ A+S + LE L LF R +++ LT AG+Q Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 879697 RRVGPAIADLEDAVNEAASARNRPXXXXXXXXXXXXXXPLVQHVLPGFLATYPDIHVEFV 879876 RV +AD +A A + + + + F A +P++ V + Sbjct: 72 DRVHAILADCVEAT--ALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Query: 879877 VDTRLVDIVADGFDAGIRVLQDVPRDMIATRFGPDMRFIAVASPDYVARNGKPKAPHDLA 880056 V + ++ A FD G+ ++DVP IA A +P ++A G+ P DL Sbjct: 130 VREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLA--GRRVPPQDLM 187 Query: 880057 RHRCIRFRFESGALYRWDLEYRGKGASVDVDGPMTL--GNLNLMVEAALAGIGIAWVSDQ 880230 + + W +R + T+ + ++++ AL G G Sbjct: 188 EATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILGWKH 247 Query: 880231 LAAEYLASGRLVQLLAEWSPSFPGLC-LYYPANRHPPTALRLFAQSVREW 880377 + + SG+LV L ++ SF G + +PA+R A+ +F REW Sbjct: 248 MITPLVESGKLV-LASDAHASFGGAYQVIWPADRRDTPAVTMF----REW 292 Score = 62.4 bits (150), Expect = 2e-07 Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 19/229 (8%) Frame = -2 Query: 2480362 LQQLKVFVAVARERSFTRAAREFDLTQSAVSRCVRELEEAVELKLFDRTTRQVELTHAGA 2480183 LQ L F A AR +FTRAA E ++ Q AVS+ V +LE + LF R + + LT AG Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 2480182 SLERRIGRLL----DEIELTLREERAAYDGHTGVVVLASNPVLSSGWVAQGLARCAAAFP 2480015 R+ +L + L ++E+ H+ + AS ++ ++A +A +A P Sbjct: 69 QYADRVHAILADCVEATALVMKEQTP----HSLTIACASG--TATLFLADRIAEFSAEHP 122 Query: 2480014 ELIVSVRDQPQGGVLASVEQGEVDFGVVSLAE---------PLAGDLLHAQVVFTTPLHA 2479862 E VSVR + GV ++ E D GV + + + + +HA T Sbjct: 123 E--VSVRILVREGVF-NLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGR 179 Query: 2479861 VMPPAHPLARHAAVA------WSALHEWALVTLNADAGMRPALELAFNS 2479733 +PP + VA W +W +T+ + G RPA ++ NS Sbjct: 180 RVPPQDLMEATLLVAEEQQRQWMGWRDWFRLTV-GEIGFRPARTISANS 227 Score = 62.4 bits (150), Expect = 2e-07 Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 3/242 (1%) Frame = +1 Query: 2219260 GSLIAAARKLGLSPSAVTQRLQQLERKLGAQLVNRTARRLQFTEEGTLLCERGAELVQQF 2219439 G+ AA +L ++ AV++++ +LE LG L R A+ L T G +R ++ Sbjct: 22 GNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILA-- 79 Query: 2219440 DALFEDLQMRRGGLVGTLKINAPLGFGRRHLAPAIAAFQQQNPDIDIALTLSDRPLTETT 2219619 D + + + +L I G LA IA F ++P++ + + + + Sbjct: 80 DCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVREGVFNLNA 139 Query: 2219620 DRFDI-VVHIGELPVSNLVGYTIAPNARFVCAAPALIRRTGVPGSPDELSKLPCIVLREN 2219796 FDI V +I ++P + G I AP + VP P +L + +V E Sbjct: 140 AEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP--PQDLMEATLLVAEEQ 197 Query: 2219797 NEDVSLWQ--FSKGRTRRSVRVSAHLSCNDGDVIRQWACEGRGVILRSEWDVADDLAKGK 2219970 W+ F R + +S N V+ Q A G G IL + + + GK Sbjct: 198 QRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILGWKHMITPLVESGK 257 Query: 2219971 LI 2219976 L+ Sbjct: 258 LV 259 Score = 62.0 bits (149), Expect = 3e-07 Identities = 76/296 (25%), Positives = 120/296 (40%), Gaps = 9/296 (3%) Frame = +3 Query: 2482179 LRQLKVFETVARHLSFSRAAEELHLTQPAVSTQVRQLEEHAGLPLFEQLGKKIYLTPAGT 2482358 L+ L F+ ARH +F+RAAEEL++ Q AVS QV +LE G LF + K ++LT AG Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 2482359 EMLHYSRAIIQQFHEVDEAMSQLKGVSGGKLNVAVIS-AGDYFFPRLLAEFTRRYSGVVL 2482535 + AI+ V+ +K + L +A S F +AEF+ + V + Sbjct: 69 QYADRVHAILADC--VEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 2482536 NLAVHNREELLHQLATNQTDLAVM----VRPPHETDATNEPFAPHPYVIVAAPTHPLAHK 2482703 + V E + L + D+ V V PP H Y APT LA + Sbjct: 127 RILV---REGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAY---CAPTF-LAGR 179 Query: 2482704 RNIRIGQLASEAFIVRERGSDTWNSMEEGFAGRLANLKI----AMEIKSTETIKQAVIAG 2482871 R + L +V E W + F + + + S + Q + G Sbjct: 180 R-VPPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHG 238 Query: 2482872 MGIAFLSAHTISLELQLGHLVVLDVESFPVMLNWYVVHRKNKRLPPVAVAFKRFLM 2483039 G H I+ ++ G LV+ + V+ ++R P F+ +L+ Sbjct: 239 HGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 62.0 bits (149), Expect = 3e-07 Identities = 40/127 (31%), Positives = 64/127 (50%) Frame = -1 Query: 2624486 GGFSKAAQRLGVATSSVTRLMDSLEASLGTALLTRTPRKVSLTDAGIAYVEQVAKVLDDL 2624307 G F++AA+ L VA +V++ + LE LGT L R + + LT AG Y ++V +L D Sbjct: 22 GNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILADC 81 Query: 2624306 AEADESVFDSGASPVGALRISVPSTYSRLCLAPHLAAFLCENPRVFLDVVVADHFADLAL 2624127 EA V +L I+ S + L LA +A F E+P V + ++V + +L Sbjct: 82 VEATALVMKE--QTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVREGVFNLNA 139 Query: 2624126 DRIDVAI 2624106 D+ + Sbjct: 140 AEFDIGV 146 Score = 61.2 bits (147), Expect = 4e-07 Identities = 39/121 (32%), Positives = 64/121 (52%) Frame = +3 Query: 743763 LDVMTMIVAVADTGNISRAAEVVHRSQSAVSMQIKTLETALGKPLFVRKPRSVIPTQDGE 743942 L + A A GN +RAAE ++ +Q AVS Q+ LET LG LFVR +++ T+ G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 743943 VLLTYARRMLALRDEAWAAVVRPDVTGRVSIGVPDDYASSLLPPILKKFSASYPKVEIQV 744122 +LA EA A V++ ++I A+ L + +FSA +P+V +++ Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRI 128 Query: 744123 V 744125 + Sbjct: 129 L 129 Score = 60.8 bits (146), Expect = 6e-07 Identities = 44/150 (29%), Positives = 71/150 (47%) Frame = +2 Query: 1005758 LRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEESLGVLLFERGSRPLNLSDTGR 1005937 L+ L +F A A NFTRAAE L++AQ +S+Q+ +LE LG LF R ++ L+L+ G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1005938 FFYSHAVQLLAQTAELESMTRRVGKIERSLSVGFVGSTLYGMLPKIIRRFRDENSAVELS 1006117 + +LA E ++ + + SL++ T L I F E+ V + Sbjct: 69 QYADRVHAILADCVEATALVMK-EQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV- 126 Query: 1006118 LHELSTMDQIKALKEGRIDVGFGRIRHEDP 1006207 + + + L D+G IR P Sbjct: 127 --RILVREGVFNLNAAEFDIGVYYIRDVPP 154 Score = 59.7 bits (143), Expect = 1e-06 Identities = 31/73 (42%), Positives = 46/73 (63%) Frame = +1 Query: 2372428 LRYFLAVAEHLHFTDAATYLGIAQPPLSQQILKLEREIGTRLFIRHPRRVELTEAGRLFR 2372607 L +F A A H +FT AA L +AQ +S+Q++KLE +GT LF+R + + LT AG+ + Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 2372608 ERAQRIVEDAREA 2372646 +R I+ D EA Sbjct: 72 DRVHAILADCVEA 84 Score = 57.4 bits (137), Expect = 6e-06 Identities = 27/70 (38%), Positives = 40/70 (57%) Frame = -1 Query: 220388 FTAVAEHGSIRAASRALGIAQSGITQQLQNLESMLGATLFTRTNRGIALTALGQRLLQRA 220209 F A A HG+ A+ L +AQ +++Q+ LE+ LG TLF R + + LT GQ+ R Sbjct: 15 FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRV 74 Query: 220208 GAIIGECERA 220179 AI+ +C A Sbjct: 75 HAILADCVEA 84 Score = 56.2 bits (134), Expect = 1e-05 Identities = 44/149 (29%), Positives = 74/149 (49%) Frame = +3 Query: 386520 LRQMRYFVAAAQSGQFSMAATAEHVSQSAITNAVLALEETLGTRLFERLPQGVTLTPDGH 386699 L+ + +F AAA+ G F+ AA +V+Q A++ V+ LE LGT LF R + + LT G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 386700 DFLNHARHILDSVRDAVYKAPFRSHDLKGTVRIAASYTVLGYFLPELMARFRATYPDIVI 386879 + + IL +A A ++ IA + FL + +A F A +P++ + Sbjct: 69 QYADRVHAILADCVEAT--ALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 386880 DLLDLDRESIEQAVLAGNVDLGVVLLSNV 386966 + L RE + + A D+GV + +V Sbjct: 127 RI--LVREGVFN-LNAAEFDIGVYYIRDV 152 Score = 55.5 bits (132), Expect = 2e-05 Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 4/200 (2%) Frame = +1 Query: 2539201 LRALQCFVIL---AEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLSLTE 2539371 L LQC V A NF+RAAE L++AQ A+S+Q+ LE LGT L R + L LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 2539372 AGHYLCSEARQILGTLEQMTVVAQEIGIGRRGWLSIGFTRSSMYSVLPPALKAFHEAFPQ 2539551 AG IL + T + + L+I + L + F P+ Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPE 123 Query: 2539552 VELKLFEMLTEEQTDALRDMRIHIGIGR-QPLAVEGCTSYPLLSEPVMAALEPGHPLAAH 2539728 V +++ L E L IG+ + + G +++E V A P A Sbjct: 124 VSVRI---LVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAP--TFLAG 178 Query: 2539729 KKVRIADLADTPLILYPKHQ 2539788 ++V DL + L++ + Q Sbjct: 179 RRVPPQDLMEATLLVAEEQQ 198 Score = 54.3 bits (129), Expect = 5e-05 Identities = 31/72 (43%), Positives = 43/72 (59%) Frame = +1 Query: 2875462 LRHLRYFLAVAEEGQFTRAAERLAMQQPPLSQQIRALEEEIGFELFVRMPRGVTLTPAGQ 2875641 L+ L +F A A G FTRAAE L + Q +S+Q+ LE +G LFVR + + LT AGQ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 2875642 AFAEDAQRLLQD 2875677 +A+ +L D Sbjct: 69 QYADRVHAILAD 80 Score = 53.5 bits (127), Expect = 9e-05 Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 3/161 (1%) Frame = +2 Query: 258413 LRYFVTLAETRHFGRAAARLNLSQPPLSRQLAALEASVGVTLVERSPRSVTLTAAGERFY 258592 L +F A +F RAA LN++Q +S+Q+ LE +G TL R +++ LT AG+++ Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 258593 ADAKAILTAVEQAVSNAQAAAQGEAGKLAIGFTMCAAYSVVPGYARVFGAAFPEVALNL- 258769 AIL +A A + L I A + F A PEV++ + Sbjct: 72 DRVHAILADCVEA--TALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Query: 258770 -REVVSNDLAEQVLAGHIDAAIMF-PNVPDKGLATRTIVSE 258886 RE V N + A D + + +VP G+A IV+E Sbjct: 130 VREGVFN-----LNAAEFDIGVYYIRDVPPPGIAGTAIVAE 165 Score = 50.8 bits (120), Expect = 6e-04 Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 4/117 (3%) Frame = -2 Query: 2093467 LAFHDS----GTLVAAAARVHLSQAAVSVQMKMLEEELGVTLFERTRRSLRLTAAGEQLV 2093300 L F D+ G AA ++++Q AVS Q+ LE LG TLF R ++L LT AG+Q Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 2093299 PLAIQLLAQYERMRGLGSTRSVAGMLSLGIITTQLTGRFSELLVRLKDSHPQLDVRV 2093129 +LA L L++ + T ++ + HP++ VR+ Sbjct: 72 DRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRI 128 Score = 50.1 bits (118), Expect = 0.001 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 3/151 (1%) Frame = +2 Query: 2276444 KIDQSIMLSELKTFIAVSQYGTFSGAGARIGLTQSAVSAQMQRLEEELGFALFDRTGRSA 2276623 KI L L F A +++G F+ A + + Q AVS Q+ +LE LG LF R ++ Sbjct: 2 KIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKAL 61 Query: 2276624 TLNDAGRETLALAEEMMTLYARLSERGAVAAES---GMLRVGAIASAQVSFLADALARFR 2276794 L AG++ A+ + + A E A+ + L + + FLAD +A F Sbjct: 62 HLTRAGQQ---YADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFS 118 Query: 2276795 DDRPGWRIRVVPGVSLGLLGQVDSGELDLAV 2276887 + P +R++ V G+ +++ E D+ V Sbjct: 119 AEHPEVSVRIL--VREGVF-NLNAAEFDIGV 146 Score = 48.9 bits (115), Expect = 0.002 Identities = 29/105 (27%), Positives = 51/105 (48%) Frame = -2 Query: 2950726 SRAASRIGRTQSALSQQMKRLEEIVEQPLFQRTGRGVVLTNPGERLLIHAQRILRLHDEA 2950547 +RAA + Q A+S+Q+ +LE + LF R + + LT G++ IL EA Sbjct: 25 TRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILADCVEA 84 Query: 2950546 MADLSGKGLSGTIRFGCPDDYAAVFLPHLLRQFSSQHPHALVEVV 2950412 A + + ++ C A +FL + +FS++HP V ++ Sbjct: 85 TALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Score = 47.0 bits (110), Expect = 0.008 Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 1/126 (0%) Frame = +2 Query: 2775068 LKQLKVFLGVANTSSFTKTAQSVHLSQAALSAIIRELETQLSCRLLERTTRTVSLTEAGR 2775247 L+ L F A +FT+ A+ ++++Q A+S + +LET L L R + + LT AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 2775248 VFYPTAMKIV-ETLEKSVIELNELGRQKQSSLLLGCTPMIAASLMPPVLVRFSRMYPDSQ 2775424 + I+ + +E + + + E Q SL + C A + + FS +P+ Sbjct: 69 QYADRVHAILADCVEATALVMKE---QTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 2775425 IELVDR 2775442 + ++ R Sbjct: 126 VRILVR 131 Score = 46.6 bits (109), Expect = 0.011 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 7/148 (4%) Frame = -1 Query: 307499 IRALRYFVETVQLGSFTQAAAAVFVTQSTISKMVRQLEDEVGQPLLIRDGRQVQLTDVGR 307320 ++ L +F + G+FT+AA + V Q +SK V +LE +G L +RD + + LT G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 307319 VVYER-------GLQALSVIRELQTEVADVAQLGRGQLTVGMPPMGNLFFPAAVRAFQQR 307161 +R ++A +++ + QT + G T LF + F Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHSLTIACASGTAT--------LFLADRIAEFSAE 120 Query: 307160 YPKLELRLAEHGGQLLEQKVIAGELEVG 307077 +P++ +R+ G + A E ++G Sbjct: 121 HPEVSVRILVREGVF---NLNAAEFDIG 145 Score = 46.6 bits (109), Expect = 0.011 Identities = 31/104 (29%), Positives = 46/104 (44%) Frame = -2 Query: 2944393 GSFSAAARRLKLGQPAVSKSIAQLEEHLGARLLLRSTRGLTPTDAGQRFYEHARRAIDEA 2944214 G+F+ AA L + Q AVSK + +LE LG L +R + L T AGQ++ + + A Sbjct: 22 GNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAIL--A 79 Query: 2944213 DQAEQAVREXXXXXXXXXRIGAAVTFARLHVLPALKTFLDQHPK 2944082 D E I A A L + + F +HP+ Sbjct: 80 DCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPE 123 Score = 46.2 bits (108), Expect = 0.014 Identities = 34/123 (27%), Positives = 55/123 (44%) Frame = +2 Query: 3327035 LRQLRYFVKVVECGNVTRAGEALHIAQPAISQQMRNLETDLGMQLLERSVHGVAPTAAGQ 3327214 L+ L +F GN TRA E L++AQ A+S+Q+ LET LG L R + T AGQ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 3327215 TLYRHAVELLRQADGTRELLRQDAELPQGKVSVAMPSSTARMVAIPLARTIRDRYPGIAL 3327394 +L L+ + E +++A S TA + +P +++ Sbjct: 69 QYADRVHAILADCVEATALVMK--EQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 3327395 ELI 3327403 ++ Sbjct: 127 RIL 129 Score = 45.8 bits (107), Expect = 0.019 Identities = 32/76 (42%), Positives = 38/76 (50%), Gaps = 7/76 (9%) Frame = -1 Query: 3070148 LQC---FLAVAQFGSVQRAAGSLSITQPAVSKTVAELEAILGVKLFERGRHGAVPTREGQ 3069978 LQC F A A+ G+ RAA L++ Q AVSK V +LE LG LF R TR GQ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 3069977 LFMPHASA----CVSA 3069942 + A CV A Sbjct: 69 QYADRVHAILADCVEA 84 Score = 45.1 bits (105), Expect = 0.032 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = +2 Query: 580601 GSFALAAERMNLTRSAVGKVIVRLEKRLGVRLLNRTTRSQSLTEDGQVYYDR 580756 G+F AAE +N+ + AV K +V+LE LG L R ++ LT GQ Y DR Sbjct: 22 GNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADR 73 Score = 43.9 bits (102), Expect = 0.072 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 2/171 (1%) Frame = -3 Query: 1306899 IKIMRQLELRHIRAFVRVAKQLHFSRAAEELGITAPSLTKLIQEAERLLGVRLFHRTKRS 1306720 +KI L+ + F A+ +F+RAAEEL + +++K + + E LG LF R ++ Sbjct: 1 MKIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKA 60 Query: 1306719 VTLSAAGSAYLAEALVALDHLARGEERAVLAERGELGQIEXXXXXXXXXXXVLQRDVGGF 1306540 + L+ AG Y A+ + A+ LA E L + + L + F Sbjct: 61 LHLTRAGQQY-ADRVHAI--LADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEF 117 Query: 1306539 RGTHPGVDISI--REVPMDNVAAMLRDGLLDAAYVRPPMPLADGIQAATVH 1306393 HP V + I RE + AA G+ V PP I A VH Sbjct: 118 SAEHPEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVH 168 Score = 42.7 bits (99), Expect = 0.16 Identities = 35/146 (23%), Positives = 61/146 (41%) Frame = +3 Query: 2733813 LMELRQLRYFIKVAEHGSMGRAAADLGVVTSALSQQISRLEGELAARLLTRTATGVTPTD 2733992 L L+ L +F A HG+ RAA +L V A+S+Q+ +LE L L R A + T Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 2733993 AGIAFLRQAQXXXXXXXXXXXXXXXXXXTGHVSVGMAATTASVLAMPFLRAMRERYPDVR 2734172 AG + + +++ A+ TA++ + +P+V Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 2734173 VHLVEALSGHLSSMLNSRRLDLAVLF 2734250 V ++ G + LN+ D+ V + Sbjct: 126 VRIL-VREGVFN--LNAAEFDIGVYY 148 Score = 41.6 bits (96), Expect = 0.36 Identities = 32/115 (27%), Positives = 49/115 (42%) Frame = +2 Query: 1376087 AIADSGKLVAAAERVHLSQSALSHQIRDIEAHYEVSLFERTRQGLRFTAAGERLLALGRE 1376266 A A G AAE ++++Q A+S Q+ +E +LF R + L T AG++ R Sbjct: 17 AAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQY--ADRV 74 Query: 1376267 TIAAVSAAERDLVRLKGDTRGELRIVLECHTCFDWLMPVMDEFRRRWPEVEVDLV 1376431 E + +K T L I T +L + EF PEV V ++ Sbjct: 75 HAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Score = 41.2 bits (95), Expect = 0.46 Identities = 58/275 (21%), Positives = 96/275 (34%), Gaps = 2/275 (0%) Frame = +1 Query: 1929847 SFTRAAESLNIPRATATTIVQNXXXXXXXXXXXXXXXXXSVTPEGAAYYERCAQILADID 1930026 +FTRAAE LN+ + + V +T G Y +R ILAD Sbjct: 23 NFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILADC- 81 Query: 1930027 EMEASIRHATDNLTGRLRIEMPGAVASTIVLPALDDFHTRYPNLDLAIGISNRTVDLISE 1930206 +EA+ + L I A+ + + +F +P + + I + +L + Sbjct: 82 -VEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVREGVFNLNAA 140 Query: 1930207 AIDCSI-QLGELPDSNLVARQLGTLE-HVTCASPAYLARYGTPTDLDDLRGHVAVNCMSP 1930380 D + + ++P + + + H CA R P DL + VA Sbjct: 141 EFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVPPQDLMEATLLVAEEQQRQ 200 Query: 1930381 HNGREVDFDFEVDGDAQNVKVKGFVKVSDEQAYLTCGLQGLGLIQPARIAAQPYLDSGLL 1930560 G F V G+ + + + L L G G I + P ++SG L Sbjct: 201 WMGWRDWFRLTV-GEI-GFRPARTISANSYPVLLQLALHGHGAILGWKHMITPLVESGKL 258 Query: 1930561 REVLPQWKPVPMPVSVAYVKNRRVSPRVRAFVDWL 1930665 V + +RR +P V F +WL Sbjct: 259 VLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 >ref|NP_835691.1|similar to DNA helicase Length = 670 Score = 124 bits (312), Expect = 3e-26 Identities = 126/493 (25%), Positives = 228/493 (46%), Gaps = 21/493 (4%) Frame = -1 Query: 1830716 VPVPRGLKAELRTYQQQGLNWMQFLREQDLAGVLADDMGLGKTVQTLAHILAEKEAGRLD 1830537 VP P G + +Q+ G++++ + ++ ++AD+MG GKT+Q+ A ++ R+ Sbjct: 97 VPAPTGY--DYFPFQKAGVHFVTEVFKEYPGALIADEMGTGKTIQS-AGVINVMNPDRV- 152 Query: 1830536 RPALIVVPTTLVHNWREEARRFAP-ELRVLVLNGPQRKERFEQIGQHELILTTYALLWRD 1830360 L+V P +L +NW E +R+ E ++V+NG + + + + + Y +L R Sbjct: 153 ---LVVCPASLKYNWERELKRWVVHEKEIIVVNGNEVDFSLK----NTIYIINYDILHRI 205 Query: 1830359 QKVLAEHDYHLLILDEAQYVKNATTKAAQAIRGL------RARHRLCLTGTPLENHLGEL 1830198 + ++ Y L+I+DE Y+KN TK + ++ + + L LTGTP+ N EL Sbjct: 206 SE--EDYAYDLVIVDECHYIKNPKTKRSGFVKSIVKSSIEQGGKVLFLTGTPIVNRPIEL 263 Query: 1830197 WSQFDFLLPGFLGSQKDFTKRWRNPI------EKNGDGVRRALLARRIRPFMLRRRKDEV 1830036 + + P G+ + KR+ N + G L + M+RR K +V Sbjct: 264 YPILEMAAPKVFGNFWGYAKRYCNAYYNGYGWDFRGASNLEELQGKLRSTIMIRRLKKDV 323 Query: 1830035 ARELPAKTTILCSVDLEGAQRDLYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQ 1829856 +ELP K+ + V L A +E + A Q L +++I VL ++ Sbjct: 324 LKELPPKSRKIVPVKL---------NKMFAEEEIFKLAEDLQNL-KNYISVLREFERVGV 373 Query: 1829855 VCCDPRLVRMLKAAGDAHETHD-RTDRVEKGAR--AMRSAKL--DLLLSMLPELIEEGRR 1829691 D + +A + E +RV + R A+ A D ++S++ E EE Sbjct: 374 ESAD-----LAEAMAEFDEKMKVMFERVAEMRRFYAIHKAPFAADYIVSLVKE--EEVDG 426 Query: 1829690 VLLFSQFTGMLSXXXXXXXXXXIPYVILTGD--TADRVTPVERFQQGEVPLFLISLKAGG 1829517 +++F+ + I Y +TG+ R VE FQ G+V + L S+ A G Sbjct: 427 LVVFAHHHDVFEIIQKVLEAKGITYARITGEENVVQRQKAVEDFQSGKVDVVLCSILAAG 486 Query: 1829516 VGLNLTAADTVIHYDPWWNPAAENQATDRAHRLGQD-KPVFVYKLIAAGSIEEKIVELQE 1829340 VG+ LT A T + + W P QA DR HR+GQ+ + V ++ ++A +++E + Sbjct: 487 VGITLTRAKTAVFVELDWVPGNILQAEDRLHRIGQEAECVDIHYIVARHTLDENFADYLT 546 Query: 1829339 QKAGLADSILSED 1829301 +K + + L+ + Sbjct: 547 RKIEIIEKALNHE 559 >ref|NP_899369.1|GTP cyclohydrolase I Length = 222 Score = 124 bits (312), Expect = 3e-26 Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 1/167 (0%) Frame = -2 Query: 695965 GDDPAREGLIDTPARVVRSY-EEFYAGYQVDPREILARTFSEVDGYDEMIVLKDIRFESY 695789 G D + + L+DTP R + E +G D ++++ YD+M+ K I S Sbjct: 54 GLDLSDDSLVDTPKRWAKMMVNELMSGLSPDMFPKCTAVDNKMN-YDQMVCEKGITVLSQ 112 Query: 695788 CEHHMVPIIGRAHVAYLPEHRVVGISKLARLVDAFAKRLQIQEKMTVQIADTLNEVLQPA 695609 CEHH+V I G A VAY+P+++V+G+SK+ R+V+ FA+R QIQE++TVQIA+ L +L+ Sbjct: 113 CEHHIVTIDGFATVAYIPKNKVLGLSKMNRIVEYFARRPQIQERLTVQIAEALKFILETE 172 Query: 695608 GVGVILEAAHQCMSTRGVHKAGVTMVTSRMLGTFRTDPSTRREFLSI 695468 V V+++A H C+ RGV + VTS + G FR +P R EF+S+ Sbjct: 173 DVAVLIDAKHYCVKARGVEDNNSSTVTSHLSGAFRNEPEARAEFMSL 219 >ref|NP_075308.1|gp41 Length = 608 Score = 124 bits (311), Expect = 4e-26 Identities = 99/376 (26%), Positives = 176/376 (46%), Gaps = 5/376 (1%) Frame = -2 Query: 3130744 SRVLRKMERTGVLIDSEKLRQQSSEIATRLIQLESEAYVL----AGGEFNLGSPKQIGQI 3130577 + V+ +ERTG L+D + + S+++ + SE Y A G ++ S +++ Sbjct: 225 AEVMSYVERTGFLLDVDYSEKLSADMLRK-----SEHYTAVARYAYGVDSVNSTEKLAD- 278 Query: 3130576 FFEKLELPVVKKTPSGAPSTDEEVLQKLAEDF-PLPKILLEHRGLSKLKSTYTDKLPRMV 3130400 E+ + + +T +G + E+L+ LAE+ L K +E + + T+ Sbjct: 279 GLERTGVKIKGRTATGKRQVNAELLEALAEEGNALAKAAIEAKKWGSWEKTWVRNFIERR 338 Query: 3130399 NATTGRVHTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPAGHKLVSADYSQ 3130220 +A RVH A T R+++N+P+ QN+P +R F+A G +VS DY Sbjct: 339 DAND-RVHPGINPLQARTARMSTNNPSAQNLPAGDW---MVRRCFLADPGQLMVSVDYQA 394 Query: 3130219 IELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGM 3130040 ELR++A ++ D +++ +F D+H+ TA + S R+V K++NF ++G Sbjct: 395 QELRVLAALANDRTMIQAFKDNADLHQITA---------DASGVDRKVGKMVNFAYVFGS 445 Query: 3130039 SSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETRVSAKAKGYVETVFGRRLWLPEI 3129860 +A+ GIT AK I + YP V + A GYV T GRRL + Sbjct: 446 GPSTIAAQAGITFPEAKRVIAGFEQSYPEVTALSKSLQREAANLGYVITPTGRRLPVDPD 505 Query: 3129859 NGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESKIGTRMIMQVHDELILEV 3129680 G AA+N +Q T+ D+ +++ + E+ + + + +HDE++ V Sbjct: 506 RG----------YAALNYMVQSTSRDVTASAVLR----LHEAGMTPMIRLVIHDEVLASV 551 Query: 3129679 PDAELSDVRKRLPELM 3129632 P+AE K + +M Sbjct: 552 PEAEAEATAKEIGRIM 567 >ref|YP_024986.1|DNA polymerase I Length = 633 Score = 122 bits (307), Expect = 1e-25 Identities = 164/663 (24%), Positives = 274/663 (41%), Gaps = 72/663 (10%) Frame = -2 Query: 3131335 WEQFDAWLGKINAA--ELTSFDTETTSLDPMIAQIVGLSLSVEAGRAAYVPLAHRGPDAP 3131162 WE+ +G I+ E ++DTE T L + ++ G S++ G++ Y + + PDA Sbjct: 5 WERTGRRMGFIDLTKYEAWAYDTECTGLKYKVDKVFGFSVATPDGQSGYFDIREQ-PDA- 62 Query: 3131161 VQLPRDEVLARLKPWL-ESAGHKK---VGQHLKYDEQVLANYGIEM-------RGI---- 3131027 VQ WL E A K V + +D ++ + GI++ GI Sbjct: 63 VQ------------WLVEQADSYKGTIVCHNASFDYRMSLHSGIKLPLSQIDDTGIRACC 110 Query: 3131026 --EHDTLLQSYVVESHRTHDMDSLALRHLGVKTIKYEEVAGKGAGQIGFDXXXXXXXXXX 3130853 EH++ + + + +D LA +++G + KY E+ + A G Sbjct: 111 INEHESTIFPWTRGKAGDYSLDYLAKKYVGAQ--KYAEIYDELAAMFGGKATRKTQMPNL 168 Query: 3130852 XXXXXDITLRLHQVLYPQVAAEKTLQYVYHDIELPTSRVLRKM--------------ERT 3130715 + + Y AE TL+ EL R L K+ E Sbjct: 169 YRAPSGLVRK-----YACPDAELTLELWLEQQELIAKRGLEKIVAFERKVMPTLIRAEAR 223 Query: 3130714 GVLIDSEKLRQQSSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFEKLEL------- 3130556 GV +D Q ++ + + +++ + LAG EFN SPKQ+ ++F K E Sbjct: 224 GVRVDLNYAEQAILKMDGVVRENQAKMFQLAGREFNPNSPKQVREVFGAKEERGVWTSRD 283 Query: 3130555 -PVVKKTPSGAPSTDEEVLQKLAEDFPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRV 3130379 V+++T +G P D + L+ + + PL +LE R K K T+ K + ++ GRV Sbjct: 284 GTVLERTATGNPCLDADALRAMKD--PLAAAVLELRSNIKTKDTFLAK-HVVEHSVGGRV 340 Query: 3130378 HTNYAQAVAV-----TGRLASNDPNLQNIPVRTGE-GRRIREAFIAPAGHKLVSADYSQI 3130217 + N Q TGRL+ P LQ IP R I+ AF+ G + +D + Sbjct: 341 YPNINQMKGEDGGTGTGRLSYTGPALQQIPSRNKRIAAIIKPAFLPEEGQLWLDSDMASF 400 Query: 3130216 ELRIMAHI--SGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYG 3130043 E+RI AH+ + + ++ ++++ ++ P S + AK +N G+I+ Sbjct: 401 EVRIFAHLVAAYNPAIARAYAENPELDLHQWVGDLMGIPRNASYSGQANAKQMNLGMIFN 460 Query: 3130042 MSSFGLASNLGITRD-------------------AAKLYIDRYFARYPGVARYMDETRVS 3129920 +A +LG+ + AK I Y + GV + Sbjct: 461 RGDGAVADSLGMPWEWCEFTDKKGDLIRYKKAGPEAKAVIAAYHTQIQGVKTLATRAQKI 520 Query: 3129919 AKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIE 3129740 A+ +G+++T GRRL P NG + A I Q TAAD K + W+ Sbjct: 521 AEERGWIQTAHGRRLRFP-----NGYKSYKASGILI----QATAADENK------ENWLR 565 Query: 3129739 -ESKIGT--RMIMQVHDELILEVPDAELSDVRKRLPELMCGVADLKVPLVAEV-GAGLNW 3129572 E +G+ MI+ HD + V D + +R+ + + L+VPL+ E G G NW Sbjct: 566 IEDALGSDGSMILNTHDSYSMSV-DENWKPIWERVKKAV-ERQTLRVPLLLEFDGVGKNW 623 Query: 3129571 EEA 3129563 EA Sbjct: 624 AEA 626 >ref|YP_024429.1|DNA polymerase I Length = 633 Score = 122 bits (306), Expect = 2e-25 Identities = 163/663 (24%), Positives = 274/663 (41%), Gaps = 72/663 (10%) Frame = -2 Query: 3131335 WEQFDAWLGKINAA--ELTSFDTETTSLDPMIAQIVGLSLSVEAGRAAYVPLAHRGPDAP 3131162 WE+ +G I+ E ++DTE T L + ++ G S++ G++ Y + + PDA Sbjct: 5 WERTGRRMGFIDLTKYEAWAYDTECTGLKYKVDKVFGFSVATPDGQSGYFDIREQ-PDA- 62 Query: 3131161 VQLPRDEVLARLKPWL-ESAGHKK---VGQHLKYDEQVLANYGIEM-------RGI---- 3131027 VQ WL E A K V + +D ++ + GI++ GI Sbjct: 63 VQ------------WLVEQADSYKGTIVCHNASFDYRMSLHSGIKLPLSQIDDTGIRACC 110 Query: 3131026 --EHDTLLQSYVVESHRTHDMDSLALRHLGVKTIKYEEVAGKGAGQIGFDXXXXXXXXXX 3130853 EH++ + + + +D LA +++G + KY E+ + A G Sbjct: 111 INEHESTIFPWTRGKAGDYSLDYLAKKYVGAQ--KYAEIYDELAAMFGGKATRKTQMPNL 168 Query: 3130852 XXXXXDITLRLHQVLYPQVAAEKTLQYVYHDIELPTSRVLRKM--------------ERT 3130715 + + Y AE TL+ EL R L K+ E Sbjct: 169 YRAPSGLVRK-----YACPDAELTLELWLEQQELIAKRGLEKIVAFERKVMPTLIRAEAR 223 Query: 3130714 GVLIDSEKLRQQSSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFEKLEL------- 3130556 GV +D Q ++ + + +++ + LAG EFN SPKQ+ ++F K E Sbjct: 224 GVRVDLNYAEQAILKMDGVVRENQAKMFQLAGREFNPNSPKQVREVFGAKEERGVWTSRD 283 Query: 3130555 -PVVKKTPSGAPSTDEEVLQKLAEDFPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRV 3130379 ++++T +G P D + L+ + + PL +LE R K K T+ K + ++ GRV Sbjct: 284 GTILERTATGNPCLDADALRAMKD--PLAAAVLELRSNIKTKDTFLAK-HVVEHSVGGRV 340 Query: 3130378 HTNYAQAVAV-----TGRLASNDPNLQNIPVRTGE-GRRIREAFIAPAGHKLVSADYSQI 3130217 + N Q TGRL+ P LQ IP R I+ AF+ G + +D + Sbjct: 341 YPNINQMKGEDGGTGTGRLSYTGPALQQIPSRNKRIAAIIKPAFLPEEGQLWLDSDMASF 400 Query: 3130216 ELRIMAHI--SGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYG 3130043 E+RI AH+ + + ++ ++++ ++ P S + AK +N G+I+ Sbjct: 401 EVRIFAHLVAAYNPAIARAYAENPELDLHQWVGDLMGIPRNASYSGQANAKQMNLGMIFN 460 Query: 3130042 MSSFGLASNLGITRD-------------------AAKLYIDRYFARYPGVARYMDETRVS 3129920 +A +LG+ + AK I Y + GV + Sbjct: 461 RGDGAVADSLGMPWEWCEFTDKKGDLIRYKKAGPEAKAVIAAYHTQIQGVKTLATRAQKI 520 Query: 3129919 AKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIE 3129740 A+ +G+++T GRRL P NG + A I Q TAAD K + W+ Sbjct: 521 AEERGWIQTAHGRRLRFP-----NGYKSYKASGILI----QATAADENK------ENWLR 565 Query: 3129739 -ESKIGT--RMIMQVHDELILEVPDAELSDVRKRLPELMCGVADLKVPLVAEV-GAGLNW 3129572 E +G+ MI+ HD + V D + +R+ + + L+VPL+ E G G NW Sbjct: 566 IEDALGSDGSMILNTHDSYSMSV-DENWKPIWERVKKAV-ERQTLRVPLLLEFDGVGKNW 623 Query: 3129571 EEA 3129563 EA Sbjct: 624 AEA 626 >ref|NP_945019.1|unknown Length = 593 Score = 122 bits (305), Expect = 2e-25 Identities = 95/326 (29%), Positives = 143/326 (43%), Gaps = 33/326 (10%) Frame = +1 Query: 1297342 LNTDSYKASHYLQYPPEASAMFSYIESRGGRY-------DRTLFFGLQMLIKEYLCRPVT 1297500 LN D+YK+SH QYP + + R ++ D + FG+Q +K+YL Sbjct: 12 LNADAYKSSHIYQYPDATQYLMLNLTPRSDKWFNSPLAIDGVVAFGIQRFVKDYLIDHWN 71 Query: 1297501 PAMIGQAK------AFFTAHGEPFNEAGWRHVVEQYG--GYLPVRIRAVPEGSVVPTHNV 1297656 + K +G +A R E GYLPV + AV EG+VVP Sbjct: 72 ATFFERDKKEAVDEILEVMNGVLGKDAIGREHWEALHDLGYLPVEVYAVEEGTVVPMRVP 131 Query: 1297657 LVTVECDDPQVFWLASYLE-TMLLRVWYPITVATQSWHLRKTIRGYLLKSSDDLAQLPFK 1297833 ++ + W+A YLE +W T+AT + H ++ + + + D+ LP++ Sbjct: 132 MIVFQNTVSGFHWVAGYLEDAFSAEIWKACTIATIALHYKRICKKWADLTCDNDLHLPYQ 191 Query: 1297834 LHDFGARXXXXXXXXXXXXXXHLVSFMGSDTVLGVVAANHYYNETM----AAFSVPAAEH 1298001 HDF R HL SF G+D+ V A Y + SVPA EH Sbjct: 192 CHDFAMRGMSGFTDDAFNAVGHLTSFKGTDSFPAVYTAKRIYGQAYPISDIGSSVPATEH 251 Query: 1298002 STI---TSW--GRE--RETDAFRNMIAQFGK------PGAIVSVVSDSYDLFAALRVWGT 1298142 S + +W G E E F+ + F + P I S+VSD+Y+ + + Sbjct: 252 SVMCANIAWEGGNELVEEERRFKGELQTFRRFLTETYPTGIASIVSDTYNFWRTVSEILP 311 Query: 1298143 ELKQAVLDSGGMLVIRPDSGDPRTIV 1298220 L++ +++ G LVIRPDSGDP IV Sbjct: 312 ALRKEIMERDGRLVIRPDSGDPVHIV 337 Score = 65.9 bits (159), Expect = 2e-08 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 2/133 (1%) Frame = +1 Query: 1298146 LKQAVLDSGGMLVIRPDSGDPRTIVLQTMRALEASFGSAVNGKGRRVLN-NVRVIQGDGV 1298322 LK A + +V RP + I + L FG +N KG +VL+ ++ +I GD + Sbjct: 407 LKNAYMVGSANVVTRPVAEIDGAI-----KTLYNIFGGTINSKGFKVLDEHIGLIYGDSI 461 Query: 1298323 NPDSIEAILAALDQAGFAADNIVFGMGGALLQQINRDTQRFAMKCSAIRLGDEWHDVLKD 1298502 + IL L + GFA+ N+VFG+G Q + RDT FA+K + +G + + KD Sbjct: 462 TLERANEILKRLYEMGFASSNVVFGVGSYTYQYMTRDTFAFAVKATLASIGGKEIMLAKD 521 Query: 1298503 PITDT-AKRSMKG 1298538 P TD+ K+S G Sbjct: 522 PKTDSGVKKSAFG 534 >ref|NP_046860.1|DNA polymerase Length = 607 Score = 117 bits (292), Expect = 7e-24 Identities = 93/377 (24%), Positives = 169/377 (44%), Gaps = 6/377 (1%) Frame = -2 Query: 3130744 SRVLRKMERTGVLIDSEKLRQQSSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIF--F 3130571 S + ++R G L+D E S ++A + + + + E+ + + F Sbjct: 226 SEICSYIDRRGFLLDVE----YSQQLADKWLGEQQVWEAVLLNEYGIEKVNATEDVAEAF 281 Query: 3130570 EKLELPVVKKTPSGAPSTDE----EVLQKLAEDFPLPKILLEHRGLSKLKSTYTDKLPRM 3130403 E+L T SG D+ +++ E L +++ E + L K ++++ Sbjct: 282 EELGHKFTAFTDSGKRKVDKGFYADMIAAGGEKAHLAEMVQEAKKLGKWRTSWVQTFLD- 340 Query: 3130402 VNATTGRVHTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPAGHKLVSADYS 3130223 + R HT A T R++ Q +P +R F+A GH + S DY Sbjct: 341 TRDSEDRCHTFVNPLQARTSRMSITGIPAQTLPASDWT---VRRCFLADPGHVMASIDYQ 397 Query: 3130222 QIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYG 3130043 ELR++A +SGD +++ +F G D+H TA F + + +R+ AK +NFG +YG Sbjct: 398 AQELRVLAALSGDRTMIQAFKDGADLHLMTARAAFG-DHITKDDPERKYAKTVNFGRVYG 456 Query: 3130042 MSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETRVSAKAKGYVETVFGRRLWLPE 3129863 + +A GI+ + AK +D + YPGV RY + AK GY+ GRRL Sbjct: 457 GGANTVAEQTGISIETAKQVVDGFDKAYPGVTRYSRKLANEAKRNGYIINPMGRRL---- 512 Query: 3129862 INGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESKIGTRMIMQVHDELILE 3129683 P ++ +A+N +Q T+ D+ ++I + E+ + + +HDE++ Sbjct: 513 ------PVDRSRTYSALNYQIQSTSRDVTCKALIR----LHEAGFTPYLRLPIHDEIVAS 562 Query: 3129682 VPDAELSDVRKRLPELM 3129632 +P + + + + LM Sbjct: 563 LPAEKANWGAREIARLM 579 >ref|NP_039708.1|predicted 66.2Kd protein Length = 595 Score = 116 bits (290), Expect = 1e-23 Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 1/372 (0%) Frame = -2 Query: 3130744 SRVLRKMERTGVLIDSEKLRQQSSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFEK 3130565 S + ++R G L+D E R + + E+ A+ G E + S + + + E+ Sbjct: 225 SEICSYIDRQGFLLDVEYSRSLAEKWLADQEVWEAIAFTEYGVE-KVNSTEDLAE-GLEE 282 Query: 3130564 LELPVVKKTPSGAPSTDEEVLQKLAEDF-PLPKILLEHRGLSKLKSTYTDKLPRMVNATT 3130388 + + + +T +G + +L KL ED L I E + L K + T+ K + Sbjct: 283 MGVKITGRTETGKRQVNAALLDKLVEDGNELAAIAQEAKKLGKWRKTWVQKFID-TRDSE 341 Query: 3130387 GRVHTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPAGHKLVSADYSQIELR 3130208 R HT A T R++ Q +P +R FIA G + S DY ELR Sbjct: 342 DRCHTFINPLQARTSRMSITGIPAQTLP---SSDWIVRRCFIAEPGDVMASVDYQAQELR 398 Query: 3130207 IMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFG 3130028 ++A +SGD +++ +F G D+H+ TA + + R+V K NF +YG + Sbjct: 399 VLAALSGDRNMIEAFENGADLHQMTA---------DAAQVPRKVGKTANFQKVYGGGAKA 449 Query: 3130027 LASNLGITRDAAKLYIDRYFARYPGVARYMDETRVSAKAKGYVETVFGRRLWLPEINGGN 3129848 LA +GI+ AK + + A YPGV R + + A GY+ GRRL Sbjct: 450 LAEAVGISIPVAKRVHEAFSATYPGVERLSKKLAMEAGRNGYIVNAMGRRL--------- 500 Query: 3129847 GPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESKIGTRMIMQVHDELILEVPDAE 3129668 P + +A+N +Q ++ D+ ++I + E+ + + +HDE++ +P +E Sbjct: 501 -PVDSSRTYSALNYMIQSSSRDVTCRALIR----LHEAGYTPYLRLPIHDEIVASLPASE 555 Query: 3129667 LSDVRKRLPELM 3129632 + LM Sbjct: 556 AERAAAHIGHLM 567 >ref|NP_046584.1|putative transglycosylase Length = 2285 Score = 114 bits (285), Expect = 4e-23 Identities = 71/153 (46%), Positives = 90/153 (58%), Gaps = 8/153 (5%) Frame = +2 Query: 3242591 IQSGGLALNDVVRQTSASVASRVMA-------LSPIINEAARVADVDSALLMAVIDVESG 3242749 I+SG + +V T++S + S IN AA +VD AL+ AVI ESG Sbjct: 1390 IKSGNITQYGIVTSTTSSGGTPSSTGGSYSGKYSSYINSAASKYNVDPALIAAVIQQESG 1449 Query: 3242750 GNPQAVSPKGATGLMQLMPDTGARHGASDLFDPRQNVAAGARYLKALMRQFGG-LPLALA 3242926 N +A S GA GLMQLMP T G ++ +DP QNV G +YL + +FGG + ALA Sbjct: 1450 FNAKARSGVGAMGLMQLMPATAKSLGVNNAYDPYQNVMGGTKYLAQQLEKFGGNVEKALA 1509 Query: 3242927 AYNAGEGAVQKYGGQIPPYAETLNYVPKVIARY 3243025 AYNAG G V KYGG IPP+ ET NYV K++A Y Sbjct: 1510 AYNAGPGNVIKYGG-IPPFKETQNYVKKIMANY 1541 Score = 68.2 bits (165), Expect = 4e-09 Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Frame = -1 Query: 2312432 RLSFHPGLDLVARTGTPILAAAGGRVVFAGEKSGYGNAVEIDHGNGLMTRYGHASRLV-V 2312256 R S H G D A+ GT I + G+V AG GN V I +G + +Y H V Sbjct: 1576 RSSPHKGTDFAAKAGTAIKSLQSGKVQIAGYSKTAGNWVVIKQDDGTVAKYMHMLNTPSV 1635 Query: 2312255 HVGDLVLPRQYIADVGSTGRSTGPHLHFEVLVNGAPVNPVAYL 2312127 G V Q I VGSTG STG HLH ++ NG ++P Y+ Sbjct: 1636 KAGQSVKAGQTIGKVGSTGNSTGNHLHLQIEQNGKTIDPEKYM 1678 Score = 52.0 bits (123), Expect = 3e-04 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%) Frame = -2 Query: 2420686 GIVIGGRPGDPVKAAATGRVVYAGSGIEAYGPLIIIKHDDSLITAYGQN-STLLVKEGDA 2420510 G + G +K+ +G+V AG A G ++IK DD + Y +T VK G + Sbjct: 1582 GTDFAAKAGTAIKSLQSGKVQIAGYSKTA-GNWVVIKQDDGTVAKYMHMLNTPSVKAGQS 1640 Query: 2420509 VAQGQTIGEVGMDSRGVAS-IQFEVRQNGQPVDPLAWLPKSG 2420387 V GQTIG+VG + + ++ QNG+ +DP ++ G Sbjct: 1641 VKAGQTIGKVGSTGNSTGNHLHLQIEQNGKTIDPEKYMQGIG 1682 Score = 49.7 bits (117), Expect = 0.001 Identities = 29/78 (37%), Positives = 45/78 (57%) Frame = +1 Query: 29320 ADRHAISPILLLAVMAVESSFDRYAVSVAGARGLMQILPAAHPQLIAGAADLTDPAINVR 29499 A ++ + P L+ AV+ ES F+ A S GA GLMQ++PA L G + DP NV Sbjct: 1430 ASKYNVDPALIAAVIQQESGFNAKARSGVGAMGLMQLMPATAKSL--GVNNAYDPYQNVM 1487 Query: 29500 IGSTILRRYLDQSGGDLD 29553 G+ L + L++ GG+++ Sbjct: 1488 GGTKYLAQQLEKFGGNVE 1505 Score = 49.3 bits (116), Expect = 0.002 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 2/116 (1%) Frame = -2 Query: 1863151 GSVVEGFQPGETRGIEISGKPGDPVRAAAGGKVMYAGTGLNSYGSLIIVQHNKDFLTAYS 1862972 G G + +G + + K G +++ GKV AG + G+ ++++ + + Y Sbjct: 1569 GQQESGLRSSPHKGTDFAAKAGTAIKSLQSGKVQIAGYSKTA-GNWVVIKQDDGTVAKYM 1627 Query: 1862971 HNRKL-LVKTGDIVVQGQQIAEMGDENNSRVS-LGFELRRDGKPIDPMPYLPQGRG 1862810 H VK G V GQ I ++G NS + L ++ ++GK IDP Y+ QG G Sbjct: 1628 HMLNTPSVKAGQSVKAGQTIGKVGSTGNSTGNHLHLQIEQNGKTIDPEKYM-QGIG 1682 Score = 44.7 bits (104), Expect = 0.042 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%) Frame = -3 Query: 1828401 SGSTKGIVMGGHAGETVRAAAGGRVVYSGGRIAAYGKLVIIKHDAHLLTAYGNN-RALLV 1828225 S KG AG +++ G+V +G A G V+IK D + Y + V Sbjct: 1577 SSPHKGTDFAAKAGTAIKSLQSGKVQIAGYSKTA-GNWVVIKQDDGTVAKYMHMLNTPSV 1635 Query: 1828224 KEGTSVKAGDPIAEMGTDDKGEAS-LRFEVRVDGKPVDPLRYL 1828099 K G SVKAG I ++G+ + L ++ +GK +DP +Y+ Sbjct: 1636 KAGQSVKAGQTIGKVGSTGNSTGNHLHLQIEQNGKTIDPEKYM 1678 >ref|NP_612995.1|hypothetical protein Length = 153 Score = 106 bits (264), Expect = 1e-20 Identities = 56/123 (45%), Positives = 81/123 (65%), Gaps = 4/123 (3%) Frame = +2 Query: 107354 MRTIGIRVAPKRVTFVVYDASESEILNVEEITVPKAMDTPEQLKFVRGTILDVIREYGVT 107533 MR +G+R APK +FVVY +ES + V+ I +P +DTPE+LK+VR ILD++ Y V Sbjct: 1 MRILGVRAAPKVTSFVVYCTNESALKCVDVIKIPSTLDTPEKLKYVRNNILDILNLYNVE 60 Query: 107534 RAGIRVSEAVAQNPSIERIELEGVIQEAFASSDVEGYFCGRIANIAARLGMARAQ----L 107701 A IRV+E+ + N SI+R+ +E VIQEAF+SSDV Y+ R + + + L + + L Sbjct: 61 LAAIRVTESNSDNLSIDRLYIEAVIQEAFSSSDVRKYYTIRKSGMKSSLNLTEIEYKEIL 120 Query: 107702 KSH 107710 KSH Sbjct: 121 KSH 123 >ref|NP_049483.1|hypothetical protein Length = 153 Score = 106 bits (264), Expect = 1e-20 Identities = 56/123 (45%), Positives = 81/123 (65%), Gaps = 4/123 (3%) Frame = +2 Query: 107354 MRTIGIRVAPKRVTFVVYDASESEILNVEEITVPKAMDTPEQLKFVRGTILDVIREYGVT 107533 MR +G+R APK +FVVY +ES + V+ I +P +DTPE+LK+VR ILD++ Y V Sbjct: 1 MRILGVRAAPKVTSFVVYCTNESALKCVDVIKIPSTLDTPEKLKYVRNNILDILNLYNVE 60 Query: 107534 RAGIRVSEAVAQNPSIERIELEGVIQEAFASSDVEGYFCGRIANIAARLGMARAQ----L 107701 A IRV+E+ + N SI+R+ +E VIQEAF+SSDV Y+ R + + + L + + L Sbjct: 61 LAAIRVTESNSDNLSIDRLYIEAVIQEAFSSSDVRKYYTIRKSGMKSSLNLTEIEYKEIL 120 Query: 107702 KSH 107710 KSH Sbjct: 121 KSH 123 >ref|NP_817767.1|gp6 Length = 191 Score = 104 bits (259), Expect = 4e-20 Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%) Frame = -2 Query: 695932 TPARVVRSYEEFYAGYQVDPREILARTFSEVDGYDEMIVLKDIRFESYCEHHMVPIIGRA 695753 TP R +++ + +GY+ DP + L TFS D + ++L ++ +S C HH++P G A Sbjct: 29 TPLRSAKAWSDILSGYREDPADHLEVTFSAPDDPGQ-VILAGVQLQSMCAHHLLPFTGMA 87 Query: 695752 HVAYLPE--HRVVGISKLARLVDAFAKRLQIQEKMTVQIADTLNEVLQPAGVGVILEAAH 695579 VAY P RVVG+SKL+R+V +A+RLQ+QE++ D + L+PAG V++ A+H Sbjct: 88 TVAYRPSPGDRVVGLSKLSRVVQGYARRLQVQERIGADTVDAIMARLRPAGAVVLITASH 147 Query: 695578 QCMSTRGV---HKAGVTMVTSRML 695516 CM RG H A T+ + ++ Sbjct: 148 DCMRLRGAQEPHSATTTIASKGLV 171 >ref|YP_164694.1|orf59 Length = 988 Score = 103 bits (257), Expect = 8e-20 Identities = 76/266 (28%), Positives = 133/266 (50%), Gaps = 8/266 (3%) Frame = -2 Query: 3130429 TYTDKLPRMVNATTGRVHTNYAQAVAVTGRLASNDP-NLQNIPVRTGEGRRIREAFIAPA 3130253 ++ DKLP V V ++ V T RL+S+ N QN RT ++ + Sbjct: 600 SFIDKLPE-VRDKDDFVKPSFNPYVTETSRLSSSGAFNAQNQTRRTDNPNDFNYSYGVKS 658 Query: 3130252 GHK-------LVSADYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVS 3130094 ++ L++ DYS +E+ MA +S D ++ + +DIH+ A+ F V EV+ Sbjct: 659 MYRSRFKGGILLNMDYSALEIYTMAMLSKDRNMTQALLDHKDIHKHNASLGFHVPYDEVT 718 Query: 3130093 NDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETRVSAK 3129914 + R AK ++FG+ Y M LA +LG+ A+ D A P V + M +++ A Sbjct: 719 KNLRTSAKKVSFGIPYSMGIKTLAKDLGVDEKEAQRIYDAILATMPQVKQAMADSQEFAA 778 Query: 3129913 AKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEES 3129734 Y ET+ G R L ++ R A+R A N +QG+ ++++ L +I+V + + Sbjct: 779 RYKYAETLNGFRRDLSNVDSILKDVRAKAKRQAFNTEIQGSGSNIVNLGLISVHEQFCKR 838 Query: 3129733 KIGTRMIMQVHDELILEVPDAELSDV 3129656 + +++I VHD ++L+V EL++V Sbjct: 839 NLKSKIIATVHDSILLDVYPPELAEV 864 >ref|YP_006556.1|Ppp Length = 230 Score = 103 bits (256), Expect = 1e-19 Identities = 73/196 (37%), Positives = 100/196 (51%), Gaps = 7/196 (3%) Frame = -2 Query: 3152950 FVVGDLHGCVDALRYLLRVITFDPARDRLFSVGDLVDRGEHSELALALLDKPWFFAVLGN 3152771 +VVGDLHGC L L + FDPA+D L SVGDL+DRG + L LL PWF AV+GN Sbjct: 24 WVVGDLHGCYTRLMSELHRVDFDPAQDLLISVGDLIDRGTENVECLELLQMPWFRAVMGN 83 Query: 3152770 HED-MLCAVA-DGRVRRQWWYGIGGLWAAQLSDER---LQHYAEVLRGLPLARVVGSGKE 3152606 HE ML A++ DG V W GG W L ++ + E+++ LP + +G+E Sbjct: 84 HERLMLDALSPDGNVNN--WLMNGGQWFFMLDTDQEILARALVELVKRLPYIIELNTGQE 141 Query: 3152605 RFNVLHAEFFGTDAELDAGNFSAETRQQLLWGRELALGNGDP--QRQRGLSLTYCGHTPM 3152432 + HA++ D E G ++W RE + D G GHTP+ Sbjct: 142 TIVIAHADY--PDNEYQFG--KEVPLFNVVWARERISDSMDDIGGEISGADRFIFGHTPV 197 Query: 3152431 RDIKQVGSQVFIDTGA 3152384 + K +Q +IDTGA Sbjct: 198 KSPKTFWNQQYIDTGA 213 >ref|YP_024677.1|gp04 Length = 90 Score = 102 bits (254), Expect = 2e-19 Identities = 51/89 (57%), Positives = 66/89 (74%) Frame = +1 Query: 1053517 MNKQELIDAVAAATGESKAATGQTIDAIVEAVTKAVVGGDTVQLVGFGSFSTGARAARVG 1053696 MNK +LI+ VAA TG +K +G ++A++E +TK++ GDTV L GFG FS GARAAR G Sbjct: 1 MNKSDLINHVAAETGMTKTDSGFALEAVLEGITKSLRKGDTVTLTGFGVFSVGARAARTG 60 Query: 1053697 RNPSTGAEIQIAAAKTVKFTAGKAFKEAV 1053783 RNP+TG EI+I A+K KF AGK K+AV Sbjct: 61 RNPATGEEIKIPASKAPKFKAGKGLKDAV 89 >ref|NP_039714.1|predicted 76.3Kd protein Length = 682 Score = 101 bits (251), Expect = 4e-19 Identities = 145/520 (27%), Positives = 195/520 (37%), Gaps = 59/520 (11%) Frame = +2 Query: 1872164 EEGLPGIYVALLQAAETMRRGGGVGY----NFSAIRPKGARVHTTSSSASGPCSY----- 1872316 E+ G AL+ +T R G V Y + S IRP+GA++ T ASGP + Sbjct: 171 EDSREGWAAALVDLIDTHYRPGTVHYQRVYDVSRIRPQGAKLKTFGGVASGPLPFAVMLQ 230 Query: 1872317 -------------------MDVFDASCRTVESAGSRRGAQMAVLDCNHPDLLEFIEAKHS 1872439 M+V A + V + G RR A+M+++ + + +FI K S Sbjct: 231 KVANIFSEYAGITLDGIAAMEVDHAIAQCVVAGGVRRSARMSMMHWDDYQIDKFINIKAS 290 Query: 1872440 KGRWNNFNVSVGVTDEFMRAVEEDQPWQLVHRAEPSPAQRAADDVRQREDGLWVYSERPA 1872619 G N+SV V DEF R +E V R E P Q+ A V L SE Sbjct: 291 TGEHWTTNISVEVDDEFWRLAKEGYGSFAVAR-EDMPKQKRAHRV------LKALSEGAV 343 Query: 1872620 REIWDRIMRSTYDVAEPGIVFISRMNEDNNLRAVETIRATNPCGEQPLPAYGCCNLGPLN 1872799 R EPG+ S N R V TNPCGE L + CNLG +N Sbjct: 344 RN------------GEPGMWDSSLSNVGEPNRVV----CTNPCGEITLEPWEPCNLGHIN 387 Query: 1872800 LTRFVIDPFAQIKGRKPSFDWDGLAKRTRTQVRFL-----DNVLDVTLWPLPQQYEESRA 1872964 L FV D+ L + R RFL V D P+ E Sbjct: 388 LAAFVTP--------AGKTDYLDLIRAHRLMTRFLIRATFSEVAD------PKSREVLDR 433 Query: 1872965 KRRIGVGFTGLGDTLVMLGLRYNSQEGRDFAVGIAQLMRDEAYRASVELARERGAFPLFD 1873144 RRIGVG G+ L + G RY+ G Q +R+ A A V+ ER A L Sbjct: 434 NRRIGVGHLGVASYLALTGSRYSEAPGDK---RFTQFLREMA--AEVDSEAERFAHDL-- 486 Query: 1873145 AARYLETGTFASRLPEDIKQAIRRDGIRNSHLLSIAPTGTVSLAFADNASNGIEPAFSWT 1873324 R+P +K+ +IAPTGTV A S GI P FS Sbjct: 487 ------------RIPVPVKKR------------TIAPTGTV--AKMPGVSEGIHPIFSRY 520 Query: 1873325 YTR---------MKVMADGSRESFDVE----------------DYAYRLYRELGGDVNRL 1873429 + R M + + E +++E D + ELG D Sbjct: 521 FIRRVRFNLNSDMAELRRLAAEGYEIEKDLFAPNTEVVSIPTKDTLVQAVEELGWD---- 576 Query: 1873430 PDYFVSALEMSARDHLDMMAAVQP-YVDTSISKTVNVPAD 1873546 + SA E++ L A Q + D ++S T NV D Sbjct: 577 EEIVESADELTLHQLLAFQALYQMCWADNAVSFTANVHPD 616 >ref|YP_024510.1|putative ribonucleotide reductase large subunit Length = 704 Score = 99.8 bits (247), Expect = 1e-18 Identities = 123/572 (21%), Positives = 229/572 (40%), Gaps = 65/572 (11%) Frame = +2 Query: 1872089 AGTGIAATLINCFVQPVGDAIQGVD--EEGLPGIYVALLQAAETMRRGGGVGYNFSAIRP 1872262 +G L +C++ V D+I+ ++ E+ + A GGGV + + IRP Sbjct: 159 SGQANRGELSSCYLFVVDDSIESLNFVEDSV----------ANASSNGGGVAIDLTRIRP 208 Query: 1872263 KGARVHTTSSSASGPCSYMDVFDASCRTVESAGSRRGAQMAVLDCNHPDLLEFIEAKHSK 1872442 KGA V +S+ G ++ + + G R+G+ L+ H D+L+ + +K Sbjct: 209 KGAPVRNRPNSSKGVIAFAKAIEHKVSIYDQGGVRQGSGAVYLNIFHNDILDLLSSKKIN 268 Query: 1872443 G----RWNNFNVSVGVTDEFMRAVEEDQPWQLVHRAEPSPAQ-RAADDVRQREDGLWVYS 1872607 R + ++ V + ++FM V+E +P+ + + + D++ E W Sbjct: 269 ASESVRLDKLSIGVTIPNKFMELVKEGKPFYTFDTYDINKMYGKYLDELNIDE---WYDK 325 Query: 1872608 ----------ERPAREIWDRIMRSTYDVAEPGIVFISRMNEDNNLRAVETIRATNPCGE- 1872754 + ARE+ I ++ + P + +I N+++ L+ + ++ +N C E Sbjct: 326 LLNNDSIGKVKHDAREVMTDIAKTQLESGYPYVFYIDNANDNHPLKNLGKVKMSNLCTEI 385 Query: 1872755 ------QPLPAYG-----------CCNLGPLNLTRFVIDPFAQIKGRKPSFDWDGLAKRT 1872883 + Y C LG LNL V KG L + Sbjct: 386 SQLQEVSEIYPYSYSNQNVINRDVVCTLGSLNLVNVVE------KGL--------LNESV 431 Query: 1872884 RTQVRFLDNVLDVTLWP-LPQQYEESRAKRRIGVGFTGLGDTLVMLGLRYNSQEGRDFAV 1873060 R L V D+ P LP + + R IG+G L L + Y S+E D Sbjct: 432 DIGTRALTKVTDIMDLPYLPSVQKANDDIRAIGLGSMNLHGLLAKNMISYGSREALDLVN 491 Query: 1873061 GIAQLMRDEAYRASVELARERGA-FPLFDAARYLETGTFASRLPE--------------- 1873192 + + ++ + S+ +A+E G F F+ + Y F + E Sbjct: 492 SLYSAINFQSIKTSMLMAKETGKPFKGFEKSDYATGEYFVRYIRESNQPKTDKAKKVLDK 551 Query: 1873193 ----------DIKQAIRRDGIRNSHLLSIAPTGTVSLAFADNASNGIEPAFSWTYTRMKV 1873342 ++ +A++ G+ N + + APT ++S + NA++ I P S Sbjct: 552 VYIPTQDDWDELAKAVKVHGLYNGYRKAEAPTQSIS--YVQNATSSIMPVPS-------- 601 Query: 1873343 MADGSRESFDVEDYAYRLYRELGGDVNRLPDYFV---SALEMSARDHLDMMAAVQPYVDT 1873513 A +R+ D+E Y Y ++ + +F +A ++ + ++ A VQ + D Sbjct: 602 -AIENRQYGDMETYYPMPY------LSPITQFFYEGETAYKIDNKRIINTSAVVQKHTDQ 654 Query: 1873514 SISKTVNVPADYPFEAFESLYLDAWKNGLKGL 1873609 ++S + V ++ P SLY AW+ GLK L Sbjct: 655 AVSTILYVESEIPTNKLVSLYYYAWEQGLKSL 686 >ref|NP_817639.1|gp50 Length = 672 Score = 99.4 bits (246), Expect = 1e-18 Identities = 125/509 (24%), Positives = 197/509 (38%), Gaps = 41/509 (8%) Frame = +2 Query: 1872239 YNFSAIRPKGARVHTTSSSASGP--------------------------CSYMDVFDASC 1872340 Y+ S +R GA++ T +ASGP + M++ A Sbjct: 196 YDVSRVRQFGAKLKTFGGTASGPLPLARMLIDVCEILSEIATEGGQLTGIAAMEIDHAIA 255 Query: 1872341 RTVESAGSRRGAQMAVLDCNHPDLLEFIEAKHSKGRWNNFNVSVGVTDEFMRAVEEDQPW 1872520 + V + G RR A+M+++ P + EF+ K G N+S+ V DEF AVEE W Sbjct: 256 QCVVAGGVRRSARMSMMHWKDPQVYEFLRIKQDTGSHWTTNISLEVDDEFWVAVEEG--W 313 Query: 1872521 QLVHRAEPSPAQRAADDVRQREDGLWVYSERPAREIWDRIMRSTYDVAEPGI--VFISRM 1872694 A P + R RE+ + ++ + EPG +S + Sbjct: 314 -----AGP--------------------NNRILRELTEGMVAN----GEPGFWNSSLSNV 344 Query: 1872695 NEDNNLRAVETIRATNPCGEQPLPAYGCCNLGPLNLTRFVIDPFAQIKGRKPSFDWDGLA 1872874 E N + TNPCGE L + CNLG +NL FA G S+D GL Sbjct: 345 GEPNE------VVCTNPCGEITLEPWEPCNLGHVNLA-----AFAHGNG---SYDITGLY 390 Query: 1872875 KRTRTQVRFLDNVLDVTLWPL--PQQYEESRAKRRIGVGFTGLGDTLVMLGLRYNSQEGR 1873048 + R RFL + T P+ P+ E RRIGVG G+ L + G +Y+ Sbjct: 391 RAHRLVTRFL---MRATFSPVADPKSREVLDRNRRIGVGHLGVASFLALCGWKYSEARTN 447 Query: 1873049 DFAVGIAQLMRDEAYRASVELARERGAFPLFDAARYLETGTFASRLPEDIKQAIRRDGIR 1873228 + + + + +E A+ + A + R+P +K+ Sbjct: 448 EEFKWLLRSLAEEVDHAATQFAHQ-------------------LRIPVPVKKR------- 481 Query: 1873229 NSHLLSIAPTGTVSLAFADNASNGIEPAFSWTYTR-----------MKVMADGSRESFDV 1873375 ++APTGT+ A S GI P FS + R +++AD R+ ++V Sbjct: 482 -----TVAPTGTI--AKMPGVSEGIHPIFSRYFIRRVRLSMSDPDQTRMLADYGRQGYEV 534 Query: 1873376 EDYAYRLYRELGGDVNRLPDYFVSALEMSARDHLDMMAAVQPYVDTSISKTVNVPADYPF 1873555 ED LY + G V+ +P E+ D + V+ D S+++ + Sbjct: 535 ED---DLYAKFTGVVS-IPTQDTLVAEVIEHYGQDSESLVESAADLSLNELL-------- 582 Query: 1873556 EAFESLYLDAWKNGLKGLATYRPNETLGA 1873642 F++LY W + ET A Sbjct: 583 -GFQALYQTIWADNAVSFTANVDPETYNA 610 >ref|NP_040641.1|Nin protein Length = 221 Score = 99.4 bits (246), Expect = 1e-18 Identities = 73/208 (35%), Positives = 100/208 (48%), Gaps = 8/208 (3%) Frame = -2 Query: 3152950 FVVGDLHGCVDALRYLLRVITFDPARDRLFSVGDLVDRGEHSELALALLDKPWFFAVLGN 3152771 +VVGDLHGC L L I FD +D L SVGDLVDRG + L L+ PWF AV GN Sbjct: 16 WVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITFPWFRAVRGN 75 Query: 3152770 HEDMLCAVADGRVRRQWWYGIGGLWAAQLSDER------LQHYAEVLRGLPLARVVGSGK 3152609 HE M+ R W GG W L ++ L H A+ LPL + S Sbjct: 76 HEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKAD---ELPLIIELVSKD 132 Query: 3152608 ERFNVLHAEFFGTDAELDAGNFSAETRQQLLWGRELALG--NGDPQRQRGLSLTYCGHTP 3152435 +++ + HA++ + E QQ++W RE NG + +G GHTP Sbjct: 133 KKYVICHADYPFDEYEFG----KPVDHQQVIWNRERISNSQNGIVKEIKGADTFIFGHTP 188 Query: 3152434 MRDIKQVGSQVFIDTGAFGPGGKLTIVE 3152351 + +Q++IDTGA G LT+++ Sbjct: 189 AVKPLKFANQMYIDTGAVF-CGNLTLIQ 215 >ref|NP_047956.2|gp11 Length = 617 Score = 99.0 bits (245), Expect = 2e-18 Identities = 112/441 (25%), Positives = 189/441 (42%), Gaps = 24/441 (5%) Frame = -2 Query: 3130831 TLRLHQVL---YPQVAAEKTLQYVYHDIELPTSRVLRKMERTGVLIDSEKLRQQSSEIAT 3130661 T RL+ L + +++ TL H+I + + M+R G+ +D E + + Sbjct: 197 TARLNPCLDAEHARLSIRPTLLEYEHEI----AYMCAYMQRAGLALDLEYV-----DTLR 247 Query: 3130660 RLIQLESEAYVLAGGEFNLGSPKQIGQIFFEKLEL--PVVKKTPSGAPSTDEEVLQKLA- 3130490 R+++ E E ++ A + + S Q+ L + + ++T GA D+ VL LA Sbjct: 248 RMLREEEEKHLYAAAMWGVDSVNSGAQVAEALLAMGETLTQRTDGGALKVDKAVLLPLAD 307 Query: 3130489 -----------EDFPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTG 3130343 E PL + +L + K +TY D+ + GR+H N A TG Sbjct: 308 LDRDWERIGAREPNPLAEAVLRAKRAGKWVTTYADRFANN-HDPHGRIHPNINTLQARTG 366 Query: 3130342 RLASN-DPNLQNIPVRTGEGRRIREAFIAPA-GHKLVSADYSQIELRIMAHISGDESLLH 3130169 R++ N D Q +P IR A + A H + S D+ IE+R++A ++ + + Sbjct: 367 RMSINGDFAAQTLP---SSDWMIRRAIVGDAPDHIMGSVDFQAIEMRVLAALADVKRMKD 423 Query: 3130168 SFSQGE---DIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRD 3129998 F G DIH TA I LE + R+V K FG +YG +A G T Sbjct: 424 GFVNGGSDFDIHMYTAQLIKG---LEATKRDRKVFKGAGFGKVYGGGVATIARQTGATEA 480 Query: 3129997 AAKLYIDRYFARYPGVARYMDETRVSAKAKGYVE-TVFGRRLWLPEINGGNGPRRQAAER 3129821 + Y +P + R + A+ G V +V GRRL P + Sbjct: 481 EIARAVAEYDRVFPEIKRASSRWQREARGTGLVTVSVTGRRL----------PLDRNRTY 530 Query: 3129820 AAINAPMQGTAADLIKLSMIAVQKWIEESKIGTRMIMQVHDELILEVPDAELSDVRKRLP 3129641 A +N Q A D++ +M+ ++ ++ + M + +HDE++ P A+ D+ + Sbjct: 531 AVVNYQCQSAARDVLGQAMLNMR----DAGLLDYMKLPIHDEIVFSAPKADAKDIAREFE 586 Query: 3129640 ELMCGVADL-KVPLVAEVGAG 3129581 + C DL VP+VA+ G Sbjct: 587 K--CMTMDLFGVPVVADADLG 605 >ref|NP_958232.1|gene 58 protein Length = 223 Score = 98.2 bits (243), Expect = 3e-18 Identities = 72/214 (33%), Positives = 100/214 (46%), Gaps = 6/214 (2%) Frame = -2 Query: 3152950 FVVGDLHGCVDALRYLLRVITFDPARDRLFSVGDLVDRGEHSELALALLDKPWFFAVLGN 3152771 +VVGDLHGC L L I FD +D L SVGDLVDRG + L L+ PWF AV GN Sbjct: 16 WVVGDLHGCYTNLMKKLETIGFDTKKDLLISVGDLVDRGTENVECLELITFPWFRAVRGN 75 Query: 3152770 HEDMLCAVADGRVRRQWWYGIGGLWAAQLSDER---LQHYAEVLRGLPLARVVGSGKERF 3152600 HE M+ R W GG W L ++ + A LPL + S +++ Sbjct: 76 HEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKAGELPLIIELVSKGKKY 135 Query: 3152599 NVLHAEFFGTDAELDAGNFSAET-RQQLLWGRELALGNGD--PQRQRGLSLTYCGHTPMR 3152429 + HA++ D F QQ++W RE + D + +G GHTP Sbjct: 136 VICHADY-----PCDKYEFGKPVDHQQVIWNRERISNSQDGIVKEIKGADTFIFGHTPAV 190 Query: 3152428 DIKQVGSQVFIDTGAFGPGGKLTIVEPLALRRWS 3152327 + +Q++IDTGA G LT+++ W+ Sbjct: 191 KPLKFSNQMYIDTGAVF-CGNLTLIQVQGEGAWA 223 >ref|NP_076796.1|Orf17 Length = 168 Score = 95.5 bits (236), Expect = 2e-17 Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 1/171 (0%) Frame = -3 Query: 949578 VRQLGPDDRDDYFQLRLRGLRAHPDSFGQSYEEALAKGASQHDAILEGSRAAEGDFLLGA 949399 +R + D Y +LRL L+A +SFG +YE + + I+E F +G Sbjct: 3 IRLIDKSDWSSYQKLRLNALKAASESFGSTYEREVKFSEQE---IIERISPNSSKFFMGI 59 Query: 949398 YASAGTPLIGVVGLLRIPNDKQRHKAAMVGMYVAPEAAGRGVGRALLNELLARASR-VDG 949222 + G LIG+V + +K RHK + GM++ + +G+ + LL+ L+ + Sbjct: 60 FD--GKELIGMVSFHKEIGEKDRHKGDIYGMFIHGDYQNKGLAKLLLSTLINKVKEEYPD 117 Query: 949221 LRQIQLLVGSRNEAARKLYESLGFRKYGCEIGALNVNGVFHDADLMALFIK 949069 L QI+L V S N +A KLY LGF KYG EI AL + D DLM LF+K Sbjct: 118 LEQIRLSVVSNNISAVKLYGHLGFEKYGVEINALKTGDKYFDEDLMVLFLK 168 >ref|YP_195262.1|hypothetical protein Length = 231 Score = 95.1 bits (235), Expect = 3e-17 Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 3/197 (1%) Frame = +3 Query: 236895 NVLNAEQLRIVRERLDTAGDAWVDGRATAGYQGA---PVKRNQQIAEHTPIARELGDVIL 237065 ++L +++R + E+ D A A DG + + +K +++I +T R D+I Sbjct: 6 DLLTQDEVRRINEQYDKA--ALKDGTVKINLENSVEKQLKNSKEIDGNTSHYRYCLDLIQ 63 Query: 237066 ASIERNPLFISSVLPNQVYPPLFNRYEGGMQFGSHVDGAVRVLPNGVKLRTDVSVTLFIS 237245 ++ RN LF ++ + ++ PP+ Y G + HVD ++++ LRTD S+TLF+S Sbjct: 64 KAMRRNALFKTTYILGEITPPIMVEYAEGCYYIPHVD-SIQIQ----NLRTDHSMTLFLS 118 Query: 237246 DPADYDGGELVIEDTYGVQQVKLPAGDMIVYPATSLHQVTPVTRGVRVASFFWVQSLVRS 237425 +P +Y+GGELVI + K AG +I+YP LH+V P+T G R S W S++ Sbjct: 119 EPDEYEGGELVIGIGDVAKSFKEKAGTVIMYPTGMLHEVRPITSGKRRVSVMWATSIIDD 178 Query: 237426 DTQRAMLFDMDTAIQRL 237476 R L + ++++ Sbjct: 179 TFMRHELINFGMGLKKI 195 Score = 94.0 bits (232), Expect = 6e-17 Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 3/201 (1%) Frame = -3 Query: 872385 MLHLQGVLSKQQVAQCREVLDAAQWIDGNVTSGEQSA---QAKRNQQLPEGSAAARAVGD 872215 M++ +L++ +V + E D A DG V +++ Q K ++++ ++ R D Sbjct: 1 MIYKFDLLTQDEVRRINEQYDKAALKDGTVKINLENSVEKQLKNSKEIDGNTSHYRYCLD 60 Query: 872214 AIQDALGRNPRFFSAALPLKVFPPLFNRYAGGDGFATHVDNAIRQLRGTDFRIRSDLSAT 872035 IQ A+ RN F + + ++ PP+ YA G + HVD+ Q +R+D S T Sbjct: 61 LIQKAMRRNALFKTTYILGEITPPIMVEYAEGCYYIPHVDSIQIQ------NLRTDHSMT 114 Query: 872034 LFLAEPDTYEGGELCIEDTYGVHRARLPAGDMVLYPASSLHHVSPVTRGVRVASFFWIQS 871855 LFL+EPD YEGGEL I + AG +++YP LH V P+T G R S W S Sbjct: 115 LFLSEPDEYEGGELVIGIGDVAKSFKEKAGTVIMYPTGMLHEVRPITSGKRRVSVMWATS 174 Query: 871854 MVRDDGERATLFQLDNDVQRL 871792 ++ D R L ++++ Sbjct: 175 IIDDTFMRHELINFGMGLKKI 195 >ref|NP_818603.1|gp65 Length = 653 Score = 94.7 bits (234), Expect = 4e-17 Identities = 123/508 (24%), Positives = 210/508 (41%), Gaps = 77/508 (15%) Frame = -1 Query: 1830620 VLADDMGLGKTVQTLAHILAEKEAGRLDRPALIVVPTTLVH-NWREE-ARRFAPELRVLV 1830447 V+AD GLGKT+Q +A +L + G + L+V P T V W +E AR P V V Sbjct: 145 VIADQPGLGKTLQVIAALLEMQTRGAI----LVVAPKTAVEVTWPDEIARWIGPNENVFV 200 Query: 1830446 LNGP----QRKER------FEQIGQHELILT------------TYALLWRDQKV------ 1830351 +N +RK R + G+ +LT Y RD+K Sbjct: 201 INSEAKPDERKARVLRAKALAEQGERVWVLTGSSYIRIKAEFDDYGNYLRDEKKQKIVRA 260 Query: 1830350 -------LAEHDYHLLILDEAQYVKNATTK-----AAQ-----AIRGLRARHRLCLTGTP 1830222 L + +I+DE+Q V +T +AQ A+ + R+ ++GTP Sbjct: 261 VGHTVADLFRMSFSAVIVDESQEVLACSTGNKKKWSAQRTGMGALDIVPGAPRIAISGTP 320 Query: 1830221 LENHLGELWSQFDFLLPGFLGSQKDFTKRWRNPIE---------KNGDGVR-RALLARRI 1830072 +W ++L P S + +R ++ + GD +R + Sbjct: 321 FRGKTENIWGTLNWLAPKKYTSYWKWVRRHYGVVDNWDSGEAHMEKGDTIRDEKRFFSEL 380 Query: 1830071 RPFMLRRRKDEVARE----------------LPAKTTILCSVDLEGAQRDLYETVRTAMQ 1829940 RP ++RR E+ R+ K+ + + L Q+ Y+ + ++ Sbjct: 381 RPILIRRTHAELRRQGFITGEKLYGGTPLDPNDPKSPVAVWLPLTPKQQKQYDQI---LK 437 Query: 1829939 EKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRMLKAAGDAHETHDRTDRVEKGAR 1829760 + V S G + ++V +L ++ VR+ + AG A + + Sbjct: 438 DAVITLESLAG-EKDEVVVNGSLAEM---------VRLKQVAGSALGLDVKPE------- 480 Query: 1829759 AMRSAKLDLLLSMLPELIEEGRRVLLFSQFTGMLSXXXXXXXXXXIPYVILTGDT--ADR 1829586 + S K++ + + L E I G + ++ SQFT L I + + TG T ++R Sbjct: 481 -LPSNKIEWIKNFLSERISAGTKTVVASQFTQFLELLSRECDKAGIRHYLYTGKTVGSER 539 Query: 1829585 VTPVERFQQ--GEVPLFLISLKAGGVGLNLTAADTVIHYDPWWNPAAENQATDRAHRLGQ 1829412 FQ GE+ + L++ K+GG+ L L AAD V+ D W P + Q +RA+ + Sbjct: 540 ARIKHEFQSESGEM-VVLLNTKSGGLSLTLDAADDVVVCDQTWIPDDQEQVENRAYGRER 598 Query: 1829411 DKPVFVYKLIAAGSIEEKIVELQEQKAG 1829328 D V ++ L + G+I+E I L Q+ G Sbjct: 599 DHNVNIWNLCSLGTIDEDIAVLNLQREG 626 >ref|NP_203418.1|DNA adenine methylase Mox Length = 258 Score = 94.4 bits (233), Expect = 5e-17 Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 9/234 (3%) Frame = -1 Query: 3187163 SIDLILCDPPYGLGKDYGNDSDMRTGDDFLSWTRGWLELAIPKLKPSGSLYIFCTWQ-YA 3186987 S+D I+ DPPYG T ++ W GW L P LK +GS++ F +++ + Sbjct: 30 SVDAIVTDPPYG-----------ETALEWDRWPVGWPGLVRPLLKRTGSMWCFGSFRMWW 78 Query: 3186986 PEIFSFLKTKLTMINEIIWDRRVPSMGGTVRRFTSVHDNIGFF----AVSKDYFFDLDPV 3186819 + F+ + +++W R+ G RF VH+ F A +D F + PV Sbjct: 79 DKRDEFVSGGWVVAEDVVW-RKQNGSGFATDRFRRVHEQPVHFYRADAAWRDVFHQV-PV 136 Query: 3186818 RIPYDAATKKARSRKLFEGS----KWLEVGYNPKDVWSVSRLHRQHAERVAHPTQKPLEI 3186651 + A T R++ G+ K+ P+ + SV + H V + TQKP+ + Sbjct: 137 TMDAKARTVTRRAQPPHLGAIGAHKYTSEDGGPRLMTSVLEVRNCHGFAV-NETQKPVAL 195 Query: 3186650 VERMVLASCPKGGRVLDPFMGSGTTAVACARQQREFVGYEINESYCAIARERVS 3186489 VE +V +CP GG V D F GSG+TA+AC R F+G +I E+ C A +S Sbjct: 196 VEPLVRNACPPGGLVADFFAGSGSTALACLATGRRFIGCDIREAQCEAAARELS 249 >ref|NP_795678.1|putative helicase Length = 440 Score = 92.8 bits (229), Expect = 1e-16 Identities = 113/478 (23%), Positives = 202/478 (42%), Gaps = 19/478 (3%) Frame = -1 Query: 1830686 LRTYQQQGLNWMQFLREQDLAGVLADDMGLGKTVQTLAHILAEKEAGRLDRPALIVVPTT 1830507 L YQ+ W+ E G+L D MGLGKT+ TL+ I + D LIV P Sbjct: 3 LHEYQEYAKTWIV---EHPYCGLLLD-MGLGKTLTTLSAIDEIQNIFSEDHKILIVAPKK 58 Query: 1830506 LVHN-WREEARRFAPELRVLVLNGPQRKERFEQIGQHE--LILTTYALLWRDQKVLAEHD 1830336 + W E ++ + + G + K R E + ++ + W + + Sbjct: 59 VAEETWPTEIGKWHFDFTYSKVLGSEGK-RIEALETEADIYLINRENVTWLVEYYKTKWP 117 Query: 1830335 YHLLILDEAQYVKNATTKAAQAIRGLRAR-HRLC-LTGTPLENHLGELWSQFDFLLPG-- 1830168 + +++DE K++ +K +A+R +R + RL LTGTP N L +LW Q + G Sbjct: 118 FTFVVIDELSSFKSSKSKRFRALRKVRPKVQRLVGLTGTPAPNSLIDLWPQIYLMDRGAR 177 Query: 1830167 FLGSQKDFTKRWRNPIEKNG---------DGVRRALLARRIRPFMLRRRKDEVARELPAK 1830015 SQ F ++ P ++NG DG + + + + KD + +LP + Sbjct: 178 LETSQTRFKDKYFVPDKRNGLIIYSWALRDGAEAEIYNKIEDICVSMKAKDYL--KLPPR 235 Query: 1830014 TTILCSVDLEG--AQRDLYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQVCCDP 1829841 T + SV L A + L + + K +A ++ LA Sbjct: 236 TNNVVSVKLSNMKAYKQLEADLVLEFKNKEISAANSAVLAN------------------- 276 Query: 1829840 RLVRMLKAAGDAHETHDRTDRVEKGARAMRSAKLDLLLSMLPELIEEGRRVLLFSQFTGM 1829661 ++L+ A A D K A+ KLD L +++ E +G+ +L+F Q+ Sbjct: 277 ---KLLQMANGAIYDDD------KATVAIHDDKLDALENVVEE--SQGQPILVFYQYQHD 325 Query: 1829660 LSXXXXXXXXXXIPYVILTGDTADRVTPVERFQQGEVPLFLISLKAGGVGLNLT-AADTV 1829484 L A+ +T V+++ G++P+ L ++ G GLNL + Sbjct: 326 LERLKKRFPQ------------AEELTSVDKWNSGKIPILLCHPQSAGHGLNLQKGGHII 373 Query: 1829483 IHYDPWWNPAAENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSIL 1829310 + + W+ QA R R GQ +PV V+ ++A +++EK++ + + K +++L Sbjct: 374 VWFGLTWSLEYYQQANARLDRQGQTEPVIVHHIVAENTVDEKVLRILQGKEKNQNALL 431 >ref|NP_542554.1|putative DNA-dependent DNA polymerase Length = 854 Score = 90.5 bits (223), Expect = 7e-16 Identities = 122/587 (20%), Positives = 224/587 (38%), Gaps = 47/587 (8%) Frame = -1 Query: 1022462 GELKPATGYRPPLKLVSLDIETSAHAELYSIALEGCGQRQVYMLGPPNGNAGALDFD--- 1022292 GE P G L +V+ D T + + G G+R + L D Sbjct: 154 GEGFPEYGQARILSIVAHDNYTDEYVGFIDLDGHGLGERFPDADLDAVSHPSDLGLDKLS 213 Query: 1022291 -LEYCETRAQLLEKLNAWLERHDPDAIIGWNLVQFDLR-VLQQHAEQYRIPLRLGRGGAV 1022118 L + ++L + ++ D D ++GWN FD V+++ E+ RL R G Sbjct: 214 KLNFEPDERKMLTEFAKYVNEKDSDLVVGWNSNGFDTPFVIERMKERGVNADRLSRTGNT 273 Query: 1022117 MEWREHGLKQNHFFAGAAGRLIIDGIEALRSATWSFPSFSLEHVARSVLGEGKSIDNPYQ 1021938 Q GR D ++A + ++ S SL++ A+ L + K I++ + Sbjct: 274 YTGYGGPTIQ--------GRTCYDLMDAWKDTKFTKVSGSLDNAAQMELEDAK-IEHTDK 324 Query: 1021937 RMDEIQRRFDEDKPALAQYNLKDCELVTRIFAKTDLLPFLLERASVTGLPADRSGGSVAA 1021758 E+ + E+ YN KD L + ++L F GL +++ + Sbjct: 325 GFYEL---YSENTQKFLNYNTKDVSLTVGVNDAANVLAFKKALRDTIGLDFEQTTANNEF 381 Query: 1021757 FTHLYMPRMHRQGYVAPNLGDVAGAAS-PGGFVMDSRPGLYDSVLVLDYKSLYPSIIRTF 1021581 + ++H +GY P G +V + GL ++V+ +D SLYP+ + Sbjct: 382 IEMMIRRKLHTEGYAGPTANPPEETEKYDGAYVFPAFNGLKENVVGIDLASLYPNTLWML 441 Query: 1021580 LIDPAGLVEGMLNPADDQSVPGFLG--------ARFSRTRHC-----------------L 1021476 P V+ + D + L A+ + + L Sbjct: 442 NASPETKVDPLYVEEHDDGLYAVLEEGGDLVPVAKAANDVYFRLDYDGVFRELVDEALRL 501 Query: 1021475 PSIVGQVWQGRETAKRENNKPLSQ--ALKIIMNAFYGVLGSTGCRFFDPRLASSITMRGH 1021302 G++ + + E +K + K I+N+ YGVLG +D +A+++T+ G Sbjct: 502 KEHAGEMKKDDSLSAEEKSKWAEEYSVRKTIVNSIYGVLGWARFFLYDDDIAAAVTLTGQ 561 Query: 1021301 EIMHATRELIQGEGY-EVIYGDTDSTFVWLRHAHGEEDASRIGHALVEHINAWWRQNLRE 1021125 ++ T + + E V YGDTDS ++ + + + A+ + +N +L Sbjct: 562 AVIKRTAKYVDEESIANVAYGDTDSNYIEFDSSMNQRECLEAADAITDKLNNEVYVDLAA 621 Query: 1021124 RFGLDS---ALELQFERHYRRFFMPTVRGAEEGSKKRYAGLTV----------LPDGRED 1020984 +G+ + +++ E + FFM G KK YA V L DG+ Sbjct: 622 EYGMPTDPCRFDIEIEMYASHFFM-------SGQKKFYAYTKVWDEGMDYDATLKDGKGK 674 Query: 1020983 IVYKGLETVRTDWTPLAQQFQQELYRRIFTRQPYQDYVRDYVRDTLE 1020843 + G + + L ++ Q+E I R D +R +R+ E Sbjct: 675 LSISGYPCKKANTAQLTKEVQRETLETI-VRGGESDDIRRIIREGAE 720 >ref|YP_195155.1|hypothetical protein Length = 372 Score = 90.5 bits (223), Expect = 7e-16 Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 3/195 (1%) Frame = -2 Query: 1424356 LVPRLNRAYLFSDRFNDIVEDIVENR--RVMLIGHTGAGKTSLIEQVAARSRHGVLRSNM 1424183 L+P+ ++ Y+ F+D+ + I N V + G +G GKT +EQ A + ++R N+ Sbjct: 89 LIPQKDKNYVAFGNFSDVKKIIQSNLFYPVFITGLSGNGKTFSVEQACAVLKRELIRVNI 148 Query: 1424182 NGQTTVGDFVGFWTVKGGETIWVDGVLPTAMREGLWLIVDEIDFAEPSILAALTAVLEPH 1424003 +T D +G + + GET+W +G + A+ G L++DE+D A IL L ++LE Sbjct: 149 TIETDEDDLIGGFRLLNGETVWHNGPVVEALERGAILLLDEVDLASNKIL-CLQSILE-- 205 Query: 1424002 GRLVLKEKGNEIVAPHPDFRLFATANAVGAMSQFRHLYQGANLMNEAFLDRWRV-YLLDY 1423826 G+ + +K V P F + ATAN G S + G N++NEAFL+R+ + + +Y Sbjct: 206 GKGIFLKKTGRYVEPAAGFNIIATANTKGKGSDDGR-FIGTNVLNEAFLERFALTFEQEY 264 Query: 1423825 LTPAEEADVLMATLA 1423781 + E +L A Sbjct: 265 PSTKVETTILKKAAA 279 Score = 83.2 bits (204), Expect = 1e-13 Identities = 66/250 (26%), Positives = 115/250 (46%) Frame = +1 Query: 748633 VMVQGLHGTGKSTHIEQVAARLNWPCVRVNLDGHISRLDLVGKDAIIVRDDLQVTEFQEG 748812 V + GL G GK+ +EQ A L +RVN+ DL+G ++ + T + G Sbjct: 118 VFITGLSGNGKTFSVEQACAVLKRELIRVNITIETDEDDLIGGFRLLNGE----TVWHNG 173 Query: 748813 IVPWALQRPMALIFDEYDAGRPDVMFVIQRILERDGKFTLLDQNRVIHPHPYFRLFATTN 748992 V AL+R L+ DE D ++ +Q ILE G F L R + P F + AT N Sbjct: 174 PVVEALERGAILLLDEVDLASNKIL-CLQSILEGKGIF-LKKTGRYVEPAAGFNIIATAN 231 Query: 748993 TVGLGNLNGMYHGTQLLNHAQMDRWNVVATLNYLPRAEEAGIVLARVPQLADEAGRALLE 749172 T G G+ +G + GT +LN A ++R+ + Y P + +L + E Sbjct: 232 TKGKGSDDGRFIGTNVLNEAFLERFALTFEQEY-PSTKVETTILKKAAADIQVTDDEFCE 290 Query: 749173 SMISVAELTRKGFAAGDLSTLMSPRTVIDWAENCQIFRDPGMAFRLTFVNKCDEAERPIV 749352 ++ + A++ RK F G + ++S R ++ I+ + A ++ +N+ D+ + Sbjct: 291 NLANWADIIRKTFKDGGIDEVISTRRLVHIIRAYSIWNNRLKAIKVC-LNRFDDETKQSF 349 Query: 749353 AEYFQRCFDR 749382 E + + D+ Sbjct: 350 LELYDKIDDK 359 >ref|NP_076827.1|Csp Length = 66 Score = 89.0 bits (219), Expect = 2e-15 Identities = 43/67 (64%), Positives = 51/67 (76%) Frame = +2 Query: 3273164 MATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEVQGSGFKSLQENQKVTFEVKQGPKGKQ 3273343 MA GTVKWFN KGFGFIT ++G +DLFAHFS +Q GFKSL E QKV F+V++G +G Q Sbjct: 1 MANGTVKWFNADKGFGFITSEEG-KDLFAHFSAIQSDGFKSLDEGQKVEFDVEEGQRGLQ 59 Query: 3273344 AANIQPA 3273364 A NI A Sbjct: 60 AVNITKA 66 Score = 85.5 bits (210), Expect = 2e-14 Identities = 41/64 (64%), Positives = 48/64 (75%) Frame = +3 Query: 3073467 MDTGTVKWFNDSKGFGFITPDKGGDDLFAHFSEISGDGFKTLAENQKVSFETKQGPKGLQ 3073646 M GTVKWFN KGFGFIT ++G DLFAHFS I DGFK+L E QKV F+ ++G +GLQ Sbjct: 1 MANGTVKWFNADKGFGFITSEEG-KDLFAHFSAIQSDGFKSLDEGQKVEFDVEEGQRGLQ 59 Query: 3073647 AANI 3073658 A NI Sbjct: 60 AVNI 63 >ref|NP_758949.1|ORF58 Length = 210 Score = 88.2 bits (217), Expect = 3e-15 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 2/174 (1%) Frame = -1 Query: 3358286 AEIIAVTQQKGGVGKSTIAMHLGAAFHEKGKRVLVVDADGQNTLIHWASASSDGDTGIPF 3358107 A++IA+ QKGG GK+TI+ ++ + H G +VL+VD D Q + W+ + +G +P Sbjct: 20 AKLIAILNQKGGAGKTTISTNVASQLHADGHKVLLVDLDPQGSATDWSEQAEEGSEAVP- 78 Query: 3358106 PVVNLSEAGSQIHREIKKFVADYDIIV-VDCPPSITEKXXXXXXXXXXXXVIPTSSSPAD 3357930 + G +I K + Y+ +V VD P + + +IPT SP D Sbjct: 79 ----VIRMGKTCTCDIHKVASGYEYLVSVDGAPQVAD-LAATAVRAADMVLIPTQPSPYD 133 Query: 3357929 YWSSIGLVKLVQQAQLMNEDL-RAVFLLNKTEEKRMLTRELKRALEELGFPLLK 3357771 WS+ LV++V+ Q + + + +A F++++ ++ L E+K AL+ P+LK Sbjct: 134 CWSAAELVEIVKARQEVTDGIPKAAFIISRAIKRTKLEAEIKEALDYYELPILK 187 Score = 43.5 bits (101), Expect = 0.094 Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 4/158 (2%) Frame = -2 Query: 3186040 TEAFARAAKEAGVDG--VLVVDYPPEECANFAEQMRSAGID--PIFLLAPTSTDERIAEV 3185873 T A + DG VL+VD P+ A + G + P+ + T T ++ Sbjct: 35 TTISTNVASQLHADGHKVLLVDLDPQGSATDWSEQAEEGSEAVPVIRMGKTCT----CDI 90 Query: 3185872 GKIASGYVYYVSLKGVTGAANLDVXXXXXXXXXXXSRVPLPVGVGFGIRDAQTARAVAEV 3185693 K+ASGY Y VS+ G A+L P P + +A EV Sbjct: 91 HKVASGYEYLVSVDGAPQVADLAATAVRAADMVLIPTQPSPYDCWSAAELVEIVKARQEV 150 Query: 3185692 SDAVVIGSRIVQLLEQAAPESAAATLTRFIAEVREALD 3185579 +D + + I+ S A T+ AE++EALD Sbjct: 151 TDGIPKAAFII---------SRAIKRTKLEAEIKEALD 179 >ref|NP_049845.1|NrdA aerobic NDP reductase, large subunit Length = 754 Score = 88.2 bits (217), Expect = 3e-15 Identities = 128/567 (22%), Positives = 223/567 (39%), Gaps = 48/567 (8%) Frame = +2 Query: 1872119 NCFVQPVGDAIQGVDEEGLPGIYVALLQAAETMRRGGGVGYNFSAIRPKGARVHTTSSSA 1872298 +C V GD+++ +++ A E + + G+G N IR +G+++ Sbjct: 221 SCVVIEAGDSLKSINK--------ASASIVEYISKRAGIGINVGMIRAEGSKIGMGEVRH 272 Query: 1872299 SGPCSYMDVFDASCRTVESAGSRRGAQMAVLDCNHPDLLEFIEAKHSKG----RWNNFNV 1872466 +G + F + ++ G R GA A H ++ + K++KG R + + Sbjct: 273 TGVIPFWKHFQTAVKSCSQGGIRGGAATAYYPIWHLEVENLLVLKNNKGVEENRIRHMDY 332 Query: 1872467 SVGVTDEFMRAVEEDQPWQLVHRAEPSPAQRAA---DDVRQREDGLWVYSERP------- 1872616 V + D M ++ L E + D R RE L+ +E+ Sbjct: 333 GVQLNDLMMERFGKNDYITLFSPHEMGGELYYSYFKDQDRFRE--LYEAAEKDPNIRKKR 390 Query: 1872617 --AREIWDRIMRSTYDVAEPGIVFISRMNEDNN-LRAVETIRATNPCGEQPLPAYGC--- 1872778 ARE+++ +M A + FI N +R IR +N C E +P Sbjct: 391 IKARELFELLMTERSGTARIYVQFIDNTNNYTPFIREKAPIRQSNLCCEIAIPTNDVNSP 450 Query: 1872779 -CNLGPLNLTRFVIDPFAQIKGRKPSFDW---DGLAKRTRTQVRFLDNVLDVTLWPLPQQ 1872946 +G L+ FV+D +FDW D + + QVR LDN+LD +P+P+ Sbjct: 451 DAEIGLCTLSAFVLD----------NFDWQDQDKINELAEVQVRALDNLLDYQGYPVPEA 500 Query: 1872947 YEESRAKRRIGVGFTGLGDTLVMLGLRYNSQEGRDFAVGIAQLMRDEAYRASVELARERG 1873126 E+++ +R +GVG T L Y ++ D + + ++ +AS++LA+E+G Sbjct: 501 -EKAKKRRNLGVGVTNYAAWLASNFASY--EDANDLTHELFERLQYGLIKASIKLAKEKG 557 Query: 1873127 AFPLFDAARYLETGTFASRLPEDIKQ-----------AIRRD----GIRNSHLLSIAPTG 1873261 + R+ + I Q A+R D GIRNS L ++ P Sbjct: 558 PSEYYSDTRWSRGELPIDWYNKKIDQIAAPKYVCDWSALREDLKLFGIRNSTLSALMPCE 617 Query: 1873262 TVSLAFADNASNGIEPAFSWTYTRMKVMADGS--------RESFDVEDYAYRLYRELGGD 1873417 + S N++NG EP +K +GS + D+ DY ++L ++ G+ Sbjct: 618 SSSQ--VSNSTNGYEPPRG--PVSVKESKEGSFNQVVPNIEHNIDLYDYTWKLAKK--GN 671 Query: 1873418 VNRLPDYFVSALEMSARDHLDMMAAVQPYVDTSISKTVNVPADYPFEAFESLYLDAWKNG 1873597 L + + A+ Y D I VP + + LY W G Sbjct: 672 KPYLTQVAIML------KWVCQSASANTYYDPQIFPKGKVPMSIMID--DMLY--GWYYG 721 Query: 1873598 LKGLATYRPNETLGA-VLSVSPPQADD 1873675 +K + + G + P+ADD Sbjct: 722 IKNFYYHNTRDGSGTDDYEIETPKADD 748 >ref|NP_064753.1|RP DNA pol Length = 580 Score = 87.8 bits (216), Expect = 4e-15 Identities = 106/423 (25%), Positives = 167/423 (39%), Gaps = 23/423 (5%) Frame = -2 Query: 3130759 IELPTSRVLRKMERTGVLIDSEKLRQQSSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQ 3130580 I +P V+ K ++ G + ++ L ++ + +A EFNLGSP Q+ + Sbjct: 196 IAVPVKEVIIKRKKDGSIYSNQLLEG---------CNVQGDYTKIAWEEFNLGSPAQVNK 246 Query: 3130579 IFFEKLELPVVKKTPSGAPSTDEEVLQKLAEDFPLPKILLEHRGLSKLKSTYTD-KLPR- 3130406 P VK + E L + + P +GL K T KL + Sbjct: 247 RLDRLGWKPTVKTKSGNSYKICPENLATIPDTAPEAV-----KGLKAWKVLETRWKLAQE 301 Query: 3130405 --MVNATTGRVHTNYAQAVAVTGRLASNDPNLQNIP-VRTGE-----------GRRIREA 3130268 + TGRVH AVT R A PN+ NIP V G+ G R+A Sbjct: 302 WLQKSQETGRVHGRVILTGAVTHRAAHQGPNMANIPSVPHGKDGILWKMEGMYGAECRQA 361 Query: 3130267 FIAPAGHKLVSADYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSND 3130088 F P G LV D + I+LR++AH D G DIH F+ L Sbjct: 362 FKVPEGKLLVGTDAAGIQLRVLAHYMNDPIYTEQVIDG-DIH------TFNKEALGRYCK 414 Query: 3130087 QRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETRVSAKAK 3129908 R AK + + G + +AS LG A + ++ P + + + A + Sbjct: 415 DRPTAKTFIYAFLLGAGTGMIASILGCNNRQANEAMANFYEAIPSLKKLKSQAS-QAASM 473 Query: 3129907 GYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESKI 3129728 G+++ + GR L R ++ A++ +QG +++L+ + Q+ ++ I Sbjct: 474 GWMKGLDGRVL------------RIGSDHLALSVYLQGGETVIMRLANVFWQRQAKKEGI 521 Query: 3129727 GTRMIMQVHDELILEVPDAELSDVRKRLPELMC-GVAD------LKVPLVAEVGAGLNWE 3129569 + VHDE EV + D +RL E+ + D L P+ E G NW Sbjct: 522 NFKQCAWVHDEWQTEVDE----DQAQRLGEIQVQAIKDAGTFFKLNCPMDGEAKIGKNWL 577 Query: 3129568 EAH 3129560 E H Sbjct: 578 ETH 580 >ref|NP_695158.1|minor capsid protein Length = 1608 Score = 86.7 bits (213), Expect = 1e-14 Identities = 53/118 (44%), Positives = 64/118 (54%), Gaps = 3/118 (2%) Frame = -1 Query: 2312474 FGSPFGNRIDPFTHRLSFHPGLDLVARTGTPILAAAGGRVVFAGEKSGYGNAVEID-HGN 2312298 FGSPF FH G+D A GTPI A GG VV AG SG+GN V I G Sbjct: 1239 FGSPFKESSGYGPRAGGFHKGIDFAAPLGTPIPAQYGGTVVQAGPASGFGNWVVIKPSGA 1298 Query: 2312297 GLMTRYGHASRLVVHVGDLVLPRQYIADVGSTGRSTGPHLHFEVL--VNGAPVNPVAY 2312130 + T YGH R+ V G V Q IA VGS G+S+GPH+H+E+ + G NP+ Y Sbjct: 1299 SVDTIYGHMKRMKVKTGQHVKAGQIIAWVGSEGQSSGPHVHYELRAGLGGKSYNPMTY 1356 Score = 50.8 bits (120), Expect = 6e-04 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%) Frame = -2 Query: 1863124 GETRGIEISGKPGDPVRAAAGGKVMYAGTGLNSYGSLIIVQHNKDFL-TAYSHNRKLLVK 1862948 G +GI+ + G P+ A GG V+ AG + +G+ ++++ + + T Y H +++ VK Sbjct: 1255 GFHKGIDFAAPLGTPIPAQYGGTVVQAGPA-SGFGNWVVIKPSGASVDTIYGHMKRMKVK 1313 Query: 1862947 TGDIVVQGQQIAEMGDE-NNSRVSLGFELRR--DGKPIDPMPY 1862828 TG V GQ IA +G E +S + +ELR GK +PM Y Sbjct: 1314 TGQHVKAGQIIAWVGSEGQSSGPHVHYELRAGLGGKSYNPMTY 1356 Score = 47.4 bits (111), Expect = 0.006 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%) Frame = -3 Query: 1828398 GSTKGIVMGGHAGETVRAAAGGRVVYSGGRIAAYGKLVIIKHD-AHLLTAYGNNRALLVK 1828222 G KGI G + A GG VV +G + +G V+IK A + T YG+ + + VK Sbjct: 1255 GFHKGIDFAAPLGTPIPAQYGGTVVQAGPA-SGFGNWVVIKPSGASVDTIYGHMKRMKVK 1313 Query: 1828221 EGTSVKAGDPIAEMGTDDKGEA-SLRFEVR--VDGKPVDPLRY 1828102 G VKAG IA +G++ + + +E+R + GK +P+ Y Sbjct: 1314 TGQHVKAGQIIAWVGSEGQSSGPHVHYELRAGLGGKSYNPMTY 1356 >ref|NP_943839.1|gp61 Length = 619 Score = 86.3 bits (212), Expect = 1e-14 Identities = 117/473 (24%), Positives = 197/473 (41%), Gaps = 26/473 (5%) Frame = -2 Query: 3130972 MDSLALRHLGVKTIKYE-EVAGKGAG----QIGFDXXXXXXXXXXXXXXXDI--TLRLHQ 3130814 + +LA+R+LG+ K E A K AG Q G++ D TL L Sbjct: 159 LTALAIRYLGLSEFKGGMERAFKAAGYKTQQAGYEGMDIDSPIYRQGAMADTVATLALEP 218 Query: 3130813 VLYPQVAAEKTLQYVYH----------DIELPTSRVLRKM----ERTGVLIDSEKLRQQS 3130676 V+ + A E TL + + + L T ++ +M G+ +D E L + Sbjct: 219 VMRRR-AIEWTLDHPFEVYGATSVAEAEAILDTQEIVHRMMLWRSALGINVDREYLDRYL 277 Query: 3130675 SEIATR--LIQLESEAYVLAGGEFNLGSPKQIGQIFFEKLELPVV-KKTPSGAPSTDEEV 3130505 +++A + + A+ L GG G ++ Q + ELP +TP GA + Sbjct: 278 NQVADEQAIYTADLAAHGLDGGT---GKGAKLVQYLADLGELPQPWPRTPKGALRATKAD 334 Query: 3130504 LQKLAEDFPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQ-AVAVTGRLASN 3130328 L+ LAE PL K L + K Y K+ A TGR H A + TGR++ Sbjct: 335 LEYLAEINPLAKAQLSLANIEKTLG-YLTKVSTQA-AVTGRCHPQVATLGASATGRMSYG 392 Query: 3130327 DPNLQNIPVRTGEGRRIREAFIAPAGHKLVSADYSQIELRIMAHISGDESLLHSFSQGED 3130148 P LQ P + + G L S D+SQIE MA+++ D L ++ GED Sbjct: 393 SPELQQFP-------KDARPILCDDGDGLTSIDWSQIEPVTMANMARDIDFLAAYEAGED 445 Query: 3130147 IHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYF 3129968 ++ + + R +KV+ +YG LA+ +G T ++ + F Sbjct: 446 LYGPI---------MLAAGIDRPTSKVVLLSSMYGSGIAKLAALIGHTEESTAQIKRQMF 496 Query: 3129967 ARYPGVARYMDETRVSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTA 3129788 A A++M + A G V T GR L P + A+N +QG+A Sbjct: 497 AAMKRSAKWMVKVEEVAAQFGRVITAGGRIL----------PVDEGGIFKAVNYTVQGSA 546 Query: 3129787 ADLIKLSMIAVQKWIEESKIGTRMIMQVHDELILEVP-DAELSDVRKRLPELM 3129632 D++ +++ + + + + + +HDE+++ P AE+ ++ PE + Sbjct: 547 YDVLANTIVEMYR----RGMTDELYLAMHDEVVVSTPVAAEVQEIMSTPPEFL 595 >ref|NP_612844.1|Gp15 protein Length = 983 Score = 85.5 bits (210), Expect = 2e-14 Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 1/94 (1%) Frame = -1 Query: 2312420 HPGLDLVARTGTPILAAAGGRVVFAGE-KSGYGNAVEIDHGNGLMTRYGHASRLVVHVGD 2312244 H G+D GTP+ + G V+ E + YG + +DHG GL+T Y H S L+V+ GD Sbjct: 878 HDGIDFGTPIGTPVRVSKDGVVIKRRELTTSYGKYLFVDHGGGLITIYAHNSELLVNEGD 937 Query: 2312243 LVLPRQYIADVGSTGRSTGPHLHFEVLVNGAPVN 2312142 V Q IA G+TG STGPHLH+E+ VNG P N Sbjct: 938 RVKRGQIIAKTGNTGNSTGPHLHWELRVNGIPQN 971 Score = 65.5 bits (158), Expect = 2e-08 Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 5/134 (3%) Frame = -2 Query: 1863199 QTARHASGVSLAWPAGGSVVEGFQP----GETRGIEISGKPGDPVRAAAGGKVMYAGTGL 1863032 +T + G P G++ F G+ GI+ G PVR + G V+ Sbjct: 847 KTVNNDYGTGWVIPTTGTITATFPTYPSGGKHDGIDFGTPIGTPVRVSKDGVVIKRRELT 906 Query: 1863031 NSYGSLIIVQHNKDFLTAYSHNRKLLVKTGDIVVQGQQIAEMGDENNSR-VSLGFELRRD 1862855 SYG + V H +T Y+HN +LLV GD V +GQ IA+ G+ NS L +ELR + Sbjct: 907 TSYGKYLFVDHGGGLITIYAHNSELLVNEGDRVKRGQIIAKTGNTGNSTGPHLHWELRVN 966 Query: 1862854 GKPIDPMPYLPQGR 1862813 G P + P L G+ Sbjct: 967 GIPQNVAPSLRVGQ 980 Score = 62.0 bits (149), Expect = 3e-07 Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Frame = -2 Query: 2420734 PLRGPVLKAF----APGKSNGIVIGGRPGDPVKAAATGRVVYAGSGIEAYGPLIIIKHDD 2420567 P G + F + GK +GI G G PV+ + G V+ +YG + + H Sbjct: 860 PTTGTITATFPTYPSGGKHDGIDFGTPIGTPVRVSKDGVVIKRRELTTSYGKYLFVDHGG 919 Query: 2420566 SLITAYGQNSTLLVKEGDAVAQGQTIGEVGMDSRGVA-SIQFEVRQNGQP 2420420 LIT Y NS LLV EGD V +GQ I + G + +E+R NG P Sbjct: 920 GLITIYAHNSELLVNEGDRVKRGQIIAKTGNTGNSTGPHLHWELRVNGIP 969 Score = 57.8 bits (138), Expect = 5e-06 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Frame = -3 Query: 1828434 PAGGAVSERFVS----GSTKGIVMGGHAGETVRAAAGGRVVYSGGRIAAYGKLVIIKHDA 1828267 P G ++ F + G GI G G VR + G V+ +YGK + + H Sbjct: 860 PTTGTITATFPTYPSGGKHDGIDFGTPIGTPVRVSKDGVVIKRRELTTSYGKYLFVDHGG 919 Query: 1828266 HLLTAYGNNRALLVKEGTSVKAGDPIAEMG-TDDKGEASLRFEVRVDGKP 1828120 L+T Y +N LLV EG VK G IA+ G T + L +E+RV+G P Sbjct: 920 GLITIYAHNSELLVNEGDRVKRGQIIAKTGNTGNSTGPHLHWELRVNGIP 969 >ref|NP_813726.1|gp11 Length = 624 Score = 85.5 bits (210), Expect = 2e-14 Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 28/422 (6%) Frame = -2 Query: 3130762 DIELPTSRVLRKMERTGVLIDSEKLRQQSSEIATRLIQLESEAYVLAGGEFNLGSPKQIG 3130583 D E + + M+R G+++D E + + R+++ E + Y + + S Sbjct: 219 DYEHEIAYMCAYMQRAGLVLDLEYV-----DTLRRMLREEEDKYATIAASWGVESVNSGA 273 Query: 3130582 QIFFEKLEL--PVVKKTPSGAPSTDEEVLQKLA------------EDFPLPKILLEHRGL 3130445 Q+ L + + + T GA ++VL LA E PL + +L + Sbjct: 274 QVSEALLAMGETLTETTDGGALKVSKKVLLPLADLDRDWERIGAREPNPLAEAVLRAKRA 333 Query: 3130444 SKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLA-SNDPNLQNIPVRTGEGRRIREA 3130268 K S+Y DK + GR+H A TGR++ S D Q +P IR A Sbjct: 334 GKWVSSYADKFAEN-HDPLGRIHPTINTLQARTGRMSISGDFAAQTLP---SSDWMIRRA 389 Query: 3130267 FIAPAGHKLV-SADYSQIELRIMAHISGDESLLHSF----------SQGEDIHRATAAEI 3130121 + +V S D+ IE+R++A ++G + F G DIH TA I Sbjct: 390 VLGDKPDHIVGSVDFQAIEMRVLAALAGVRRMTEGFLDPDPDPSVYPDGFDIHMYTARLI 449 Query: 3130120 FSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARY 3129941 P D R+V K FG +YG ++ G + Y +P + R Sbjct: 450 KG--PNATKRD-RKVFKGAGFGKVYGGGIKTISRQTGAPEHEIARAVAEYDRVFPEIKRA 506 Query: 3129940 MDETRVSAKAKGYVE-TVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSM 3129764 + + A+A+G V T GR L P + A +N Q TA D++ +M Sbjct: 507 SSKWQREARARGCVTVTPTGRIL----------PLDRNRMYAVVNYKCQSTARDVLGQAM 556 Query: 3129763 IAVQKWIEESKIGTRMIMQVHDELILEVPDAELSDVRKRLPELMCGVADL-KVPLVAEVG 3129587 I ++ ++ + M + +HDE++ P ++ D+ + C DL VP+VAE Sbjct: 557 INMR----DAGLLEYMKLPIHDEIVFSAPKSDAQDIAREFER--CMTMDLFGVPVVAEAD 610 Query: 3129586 AG 3129581 G Sbjct: 611 LG 612 >ref|NP_817817.1|gp56 Length = 609 Score = 83.2 bits (204), Expect = 1e-13 Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 4/308 (1%) Frame = -2 Query: 3130543 KTPSGAPSTDEEVLQKLAEDFPLPKILLEHRGLSKLKST--YTDKLPRMVNATTGRVHTN 3130370 +TP GAPS +E L+ L D P + R L++ Y +K+ R A TGR H Sbjct: 312 RTPKGAPSAAKEHLETL--DHP---VAAAQRALAQSDKVLGYLEKVSRQA-AVTGRCHPQ 365 Query: 3130369 YA-QAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPAGHKLVSADYSQIELRIMAHI 3130193 A + TGR++ P LQ P + I G L S D++QIE MA + Sbjct: 366 VAILGASATGRMSYGSPELQQFP-------KDARPIIVDDGQGLTSVDWAQIEPVTMALM 418 Query: 3130192 SGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNL 3130013 +GD L F + + A+++ + R +AKVI +YG + +A + Sbjct: 419 AGDREFLAPFFEND-------ADLYEPI-MRACGIDRPMAKVILLATMYGQGARSMARRI 470 Query: 3130012 GITRDAAKLYIDRYFARYPGVARYMDETRVSAKAKGYVETVFGRRLWLPEINGGNGPRRQ 3129833 G T ++A + A P +M + A G + T GR L P Q Sbjct: 471 GHTEESAAQIRRQMLAAMPASRDFMAKVESIAITHGRIVTGGGRIL----------PVDQ 520 Query: 3129832 AAERAAINAPMQGTAADLIKLSMIAVQKWIEESKIGTRMIMQVHDELILEVP-DAELSDV 3129656 A+N QG+A D++ +++ ++E+ + + + +HDEL+++ AE+ + Sbjct: 521 QGSYRAVNYICQGSAYDVLAHTIVR----LDEAGLSGHVQLAMHDELVVDTDVAAEVEHI 576 Query: 3129655 RKRLPELM 3129632 PE + Sbjct: 577 MMTPPEFL 584 >ref|NP_640280.1|DNA polymerase Length = 661 Score = 82.8 bits (203), Expect = 1e-13 Identities = 85/373 (22%), Positives = 157/373 (42%), Gaps = 13/373 (3%) Frame = -2 Query: 3130744 SRVLRKMERTGVLIDSEKLRQQSSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFEK 3130565 S VL +E GV +D E++ ++ + R+ ++E++ + G N S Q+ + ++ Sbjct: 211 SPVLADIELNGVHLDKERVCEEHDIASRRMAEVEADLMDMIDGR-NPRSVPQMQEFIYDV 269 Query: 3130564 LELPVVKKTPSGAPSTDEEVLQKLAEDFPLPKILLEHRGLSKLKSTYTDKLPRMVNATTG 3130385 L+ +KK T EEVLQ A L + ++L + + L T Sbjct: 270 LKFKPLKKRGVEWRPTGEEVLQFEARTKKQQAFLDLKKEFAQLNADLSKNLDYFYGVVTE 329 Query: 3130384 R----VHTNYAQAVAVTGRLASND--------PNLQNIPVRTGEGRRIREAFIAPAGHKL 3130241 R + + QA VT RL+S+ P ++I ++ + R + Sbjct: 330 REDCLFYAQFNQAQTVTHRLSSSGIKTKFEMYPKAKSIQLQNSPRKYKRLYSARNPDWYV 389 Query: 3130240 VSADYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVIN 3130061 + D +QIE R+ +I D + G D+HR TA+ + EV+ DQR AK Sbjct: 390 IEMDGAQIEFRVAGYIGQDTRICQDIVDGVDVHRFTASVLNHCDEEEVTKDQRTDAKPDT 449 Query: 3130060 FGLIYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETRVSAKAKGYVETVFGR 3129881 F +YG +G D Y + + +Y + + + + + G Sbjct: 450 FKPLYG-GQYG--------TDDQMAYYEAFRNKYQDITQAQQDWLMKVLRNKEITHPTGI 500 Query: 3129880 RLWLPEINGGNGPRRQAAERAAINAPMQGTA-ADLIKLSMIAVQKWIEESKIGTRMIMQV 3129704 + P + + Q + N P+Q A A++I ++++A+ ++ K+ + ++ V Sbjct: 501 TFYYPNASMSSSGYCQDFP-SVCNYPVQNLATAEIIPIALVAIWHVMKAMKLQSFLVNTV 559 Query: 3129703 HDELILEVPDAEL 3129665 HD +I E P EL Sbjct: 560 HDSVISESPRDEL 572 >ref|YP_195168.1|DNA polymerase gp43 Length = 830 Score = 82.4 bits (202), Expect = 2e-13 Identities = 106/470 (22%), Positives = 192/470 (40%), Gaps = 68/470 (14%) Frame = -1 Query: 1022426 LKLVSLDIETSAH----------AELYSIALEGCGQRQVYMLGPPNGNAGALDFDLEYCE 1022277 +++ +LDIET+A E+ I+L+ ++ + G + D D + Sbjct: 106 IRVFTLDIETAAENGFPDIETADQEILLISLKDSKTNRITVFGRYAFDNKHKDVDYMHFG 165 Query: 1022276 TRAQLLEK-LNAWLERHDPDAIIGWNLVQFDLRVLQQHAEQYRIPLRLGRGGAVM--EWR 1022106 T +L L+ W + PD I GWN+ FD+ + + E+ +G A + W+ Sbjct: 166 TEVGMLNAFLHFWTSNY-PDVITGWNVQLFDMTYISRRIERV-----IGEKEAKLLSPWK 219 Query: 1022105 E--------HGLKQNHFFAGAAGRLIIDGIEALRSATWSFP-SFSLEHVARSVLGEGKSI 1021953 G KQ + +G +D +E + T++ S+ L+H+A LG K Sbjct: 220 STLAREIYIKGRKQIAY--DISGVATLDYLELYKKFTYTNQESYRLDHIASVELGTKKLD 277 Query: 1021952 DNPYQRMDEIQRRFDEDKPALAQYNLKDCELVTRIFAKTDLLPFLLERASVTGLPADRSG 1021773 + Y E + +D +YN+ D LV ++ K LL A + + Sbjct: 278 HSEYDTFKEF---YTKDWQKFVEYNIIDVRLVDQLDDKMKLLELAFTMAYDAKVNYEDVF 334 Query: 1021772 GSVAAF-THLYMPRMHRQGYVAPNLGDVAGAASPGGFVMDSRPGLYDSVLVLDYKSLYPS 1021596 V + ++Y+ + + + P A G +V + +PG YD V+ D SLYP Sbjct: 335 SQVRMWDNYIYIELLKNKIAIPPKKEARKDAKYAGAYVKEPKPGFYDWVVSFDLNSLYPH 394 Query: 1021595 IIRTFLIDPAGL---------VEGMLNP------ADDQSVPGFLGARFSRTRHCLPSIVG 1021461 +I + + P L V+ +LN D QS+ + + LP ++ Sbjct: 395 LIMQYNLSPETLLSHRHPTANVDRLLNKELDLSNLDGQSLAANGTFYDNSKQGFLPKMMQ 454 Query: 1021460 QVWQGRETAKR---------ENN------------KPLSQALKIIMNAFYGVLGSTGCRF 1021344 +++ R K E N + A KI +N+ YG +G+ R+ Sbjct: 455 KMYDERVVYKNKMLAAKQKYEENPTIELKKEIARCNNIQMAKKISLNSAYGAIGNEHFRY 514 Query: 1021343 FDPRLASSITMRG--------HEIMHATRELIQGEGYE-VIYGDTDSTFV 1021221 F +A +IT+ G +++ +L++ +G + VI DTDS ++ Sbjct: 515 FRLEIAEAITLSGQLSIRWIENKMNEYLNKLLKTDGEDYVIASDTDSIYL 564 >ref|NP_046877.1|putative non-heme haloperoxidase Length = 278 Score = 82.0 bits (201), Expect = 2e-13 Identities = 78/250 (31%), Positives = 108/250 (43%), Gaps = 8/250 (3%) Frame = -3 Query: 1990044 TIKTKDGTEIFYKDWGKGRPVVFSHGWPLTADAWDAQMLFLGSKGFRVIAHDRRGHGRSQ 1989865 TI DG + G G P+VF HG ++A A++ + L GFRVIA D HGRS Sbjct: 5 TIVLADGFRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSG 64 Query: 1989864 QPWDGNDMDTYADDLAALIEHLDLKDATLVGHSTGGGEVAHYIGRHGTQRVAKAVLIGAV 1989685 G+ ++ ++ LD+ A GHS GGG V RH RVA AVL+ A Sbjct: 65 SLPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARH-PHRVAAAVLLDAA 123 Query: 1989684 PPLMLKTGSNPGGTPLEVFDGIRK---GVEDDRSQFFKDLALPFYGYNRPGAKVSQGVID 1989514 G F +K V D ++ + L G K+S Sbjct: 124 AGQEHHDNIKVGHYATLAFRAAKKLGEAVTDIVGDGYEAMHL-----RDTGEKLS----- 173 Query: 1989513 SFWVQGMAGSIKGLYDCIKQFS--EVDYTEDLKKI---DVPTLVLHGDDDQIVPIDAAGR 1989349 ++ + S+ GL F+ + D T L + VPT VLHG DQIVP +A Sbjct: 174 --FLGMLRDSVSGLRFVRAAFALMKADTTPLLHAMYRHGVPTAVLHGLHDQIVPYEAG-- 229 Query: 1989348 LTTKIVKNAT 1989319 L+T + NA+ Sbjct: 230 LSTAKITNAS 239 Score = 76.3 bits (186), Expect = 1e-11 Identities = 73/242 (30%), Positives = 102/242 (42%), Gaps = 6/242 (2%) Frame = -3 Query: 2613678 ITTKDGTQIYYKDWGTGQPITFSHGWPLDADAWDAQMLFLAERGYRVIAHDRRGHGRSSQ 2613499 I DG ++ GTG P+ F HG + A A++ + LAE G+RVIA D HGRS Sbjct: 6 IVLADGFRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGS 65 Query: 2613498 PWNGNEMDTYXXXXXXXXXXXXLTNIVMVGHSTGGGEVVRYIGRHGTKRVARAVLIAAVP 2613319 G+ ++ + + GHS GGG VV RH RVA AVL+ A Sbjct: 66 LPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARH-PHRVAAAVLLDAAA 124 Query: 2613318 PIMLKTGANPGGLPISAFDGIREGVRNNRSQFFKDLAVPFYGFNRPDAKVSQGTIDSFWQ 2613139 G AF ++ + D+ Y +A + T + Sbjct: 125 GQEHHDNIKVGHYATLAFRAAKK-----LGEAVTDIVGDGY-----EAMHLRDTGEKLSF 174 Query: 2613138 IGML-GSIKGLYDCVKAFS-----ETDFNEDLKKVTVPALVLQGDADQIVPLDDSGKLSA 2612977 +GML S+ GL AF+ T + + VP VL G DQIVP ++G +A Sbjct: 175 LGMLRDSVSGLRFVRAAFALMKADTTPLLHAMYRHGVPTAVLHGLHDQIVPY-EAGLSTA 233 Query: 2612976 KI 2612971 KI Sbjct: 234 KI 235 Score = 61.6 bits (148), Expect = 3e-07 Identities = 64/241 (26%), Positives = 94/241 (39%), Gaps = 12/241 (4%) Frame = +1 Query: 700363 YRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKH-FRVLRYDTRGHGHSEAPKGPYT 700539 +R+ G +V + L + + L++H FRV+ D HG S + +T Sbjct: 12 FRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHT 71 Query: 700540 IEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAA------- 700698 +E +T L +D L I RA F G SMGG V +AARH R+ L + AA Sbjct: 72 VEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAAGQEHHDN 131 Query: 700699 -RIGSPEVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGY 700875 ++G RA K E + + D E+ L M+RD + Sbjct: 132 IKVGHYATLAFRAAKKLGEAVTDIVGDGYEAMHLRDTGEKLS-FLGMLRD---SVSGLRF 187 Query: 700876 ASNCEAIDAADLRPEAPGI---KVPALVISGTHDLAATPAQGRELAQAIAGARYVELDAS 701046 A+ AD P + VP V+ G HD G A+ I A + +D Sbjct: 188 VRAAFALMKADTTPLLHAMYRHGVPTAVLHGLHDQIVPYEAGLSTAK-ITNASFYGVDGF 246 Query: 701047 H 701049 H Sbjct: 247 H 247 Score = 57.8 bits (138), Expect = 5e-06 Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 1/116 (0%) Frame = +3 Query: 2975313 VIRSNGTRIHVTQQGSGELALVFLHYYGGSSRTWDAVAGELSDR-YRIIATDHRGWGDSE 2975489 ++ ++G R+ V+ G+G LVFLH S++ ++ + L++ +R+IA D G S Sbjct: 6 IVLADGFRVGVSTVGTGA-PLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSG 64 Query: 2975490 APADGYRIADLAADAEGVIEALGLRRYVLVGHSMGGKVAQLIASRRPRGLEGLVLV 2975657 + G+ + D+ ++ L + R + GHSMGG + IA+R P + VL+ Sbjct: 65 SLPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLL 120 Score = 57.4 bits (137), Expect = 6e-06 Identities = 38/118 (32%), Positives = 56/118 (47%) Frame = -1 Query: 39368 LLLLHGITSDASNWLSTMPALAQRGWRVIAPDQLGFGQSSKPSVPVRPRTLSDMVAPLLD 39189 L+ LHG++ A + + LA+ G+RVIA D G+S ++ + LD Sbjct: 25 LVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHTVEDMTRVTLKTLD 84 Query: 39188 ALGLEMVSIVGQSMGGHVAGLFAAQYPERVEALVLVNAGYGLALPEVKDPRDLGHAVT 39015 L + G SMGG + AA++P RV A VL++A G E D +GH T Sbjct: 85 ELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAAG---QEHHDNIKVGHYAT 139 Score = 52.8 bits (125), Expect = 2e-04 Identities = 52/224 (23%), Positives = 81/224 (36%), Gaps = 25/224 (11%) Frame = -2 Query: 587785 EGYVEHEGARIWYASYGAGVPVILLHGGLGHSGNWGYQLPALLGAGRRVVVVDSRGHGRS 587606 E V +G R+ ++ G G P++ LHG + + L L G RV+ +D+ HGRS Sbjct: 4 ETIVLADGFRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRS 63 Query: 587605 TRDARPYRYELMASDVLAVMDTLQLERAALVGWSDGACVAMVLGITAAERVAGVFFF--- 587435 + E M L +D L + RA G S G + + + RVA Sbjct: 64 GSLPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAA 123 Query: 587434 -------GCNMDPSGTKTFAPTPTVERCF---------SRHAKDYAQ----LSATPDDFE 587315 + T F + + H +D + L D Sbjct: 124 AGQEHHDNIKVGHYATLAFRAAKKLGEAVTDIVGDGYEAMHLRDTGEKLSFLGMLRDSVS 183 Query: 587314 A--FVGAVSTMMKTEPNYCADDLARVRVPVAIVHSEHDEFIEPE 587189 FV A +MK + + R VP A++H HD+ + E Sbjct: 184 GLRFVRAAFALMKADTTPLLHAMYRHGVPTAVLHGLHDQIVPYE 227 Score = 51.2 bits (121), Expect = 4e-04 Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 1/112 (0%) Frame = +1 Query: 187318 VDGAGSGALPLVLLHGIGSGAASWVQQFEMLGATR-RVLAWDAPGYGXXXXXXXXXXXXX 187494 V G+GA PLV LHG+ A ++ + L RV+A DA +G Sbjct: 16 VSTVGTGA-PLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHTVED 74 Query: 187495 XXXXXLKEWLDALGIERCVLLGHSLGAIIAGAFAVTHAQRVAGLLLLSPAGG 187650 LK LD L I R + GHS+G + A H RVA +LL A G Sbjct: 75 MTRVTLKT-LDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAAG 125 Score = 50.1 bits (118), Expect = 0.001 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 1/126 (0%) Frame = +2 Query: 336959 GTPAVLIHGFGGDLNNWLFNHADLAAHR-TVWALDLPGHGESGKAVETGGAEELADSVIA 337135 G P V +HG + LA H V ALD HG SG E++ + Sbjct: 22 GAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHTVEDMTRVTLK 81 Query: 337136 FMDDRGIGNAHLIGHSMGALVAMTVAERAPERVASLSLIAGAGLGDEINGEYIGGFTEGS 337315 +D+ I A GHSMG + + +A R P RVA+ L+ A + + +G + + Sbjct: 82 TLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAAGQEHHDNIKVGHYATLA 141 Query: 337316 NRNALK 337333 R A K Sbjct: 142 FRAAKK 147 Score = 49.7 bits (117), Expect = 0.001 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 2/134 (1%) Frame = -1 Query: 2157122 MQVEKYVSADGLELRYTIQGAGPYVTLVHGIGADHSSW-DVIAQALEPFFTVVRPDLRGH 2156946 M+ E V ADG + + G G + +HG+ ++ +++ + E F V+ D H Sbjct: 1 MKHETIVLADGFRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANH 60 Query: 2156945 GQSSRM-TRCSLDDFVSDIDRLLDAVKIDKTHLVGFSLGGLISQKYAIEHAQRLNRLVLI 2156769 G+S + T +++D + LD + I + G S+GG + + A H R+ VL+ Sbjct: 61 GRSGSLPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLL 120 Query: 2156768 SSVAERTDQERERV 2156727 + A + + +V Sbjct: 121 DAAAGQEHHDNIKV 134 Score = 48.9 bits (115), Expect = 0.002 Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 9/205 (4%) Frame = -2 Query: 648616 GAPTVILSHGLAADLSMWAPQLDMLSR-SFSVLCYDIRGHGGTSATPGDYSLALLADDVI 648440 GAP V L HGL+ + L L+ F V+ D HG + + P +++ + + Sbjct: 22 GAPLVFL-HGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHTVEDMTRVTL 80 Query: 648439 ALMDSLGIASAHYVGLSLGGMIGQQLGAWHGERLASLTLCATTSNAP-----KASWDARV 648275 +D L I A + G S+GG + ++ A H R+A+ L + K A + Sbjct: 81 KTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAAGQEHHDNIKVGHYATL 140 Query: 648274 HEARARGIAPLVEATVDRWVTPAFKREQPELMEQMRRMVLGTSLDGYAGSAAAIRDMELA 648095 A+ + V V R+ E + + + S + +A A+ + Sbjct: 141 AFRAAKKLGEAVTDIVGDGYEAMHLRDTGEKLSFLGMLRDSVSGLRFVRAAFALMKADTT 200 Query: 648094 PVLG---RIGVPTLVIAGEADTSTP 648029 P+L R GVPT V+ G D P Sbjct: 201 PLLHAMYRHGVPTAVLHGLHDQIVP 225 Score = 48.5 bits (114), Expect = 0.003 Identities = 65/238 (27%), Positives = 92/238 (38%), Gaps = 9/238 (3%) Frame = -2 Query: 2548975 GQGAETVVMLHGSGPGASGWANFNRNVEPLVAAGYRVILLDCLGWSKSDPVVCDGSRSEL 2548796 G GA +V LHG A + + L G+RVI LD +S + + ++ Sbjct: 20 GTGAP-LVFLHGLSVSAKAYEEM---LTRLAEHGFRVIALDAANHGRSGSLPTGHTVEDM 75 Query: 2548795 NARSLKGLLDALDIERVHIIGNSMGGHSAVAFALANPQRVGKLVLMXXXXXGPSQFVPMP 2548616 +LK LD LDI R G+SMGG V A +P RV VL+ Sbjct: 76 TRVTLK-TLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAAGQEHH----- 129 Query: 2548615 TEGIKLLQGLYREPTIDNLKRMMNVFV------FDASALTDDLMQARLDNMLARRDHLEN 2548454 + IK+ G Y K++ ++A L D + ML RD + Sbjct: 130 -DNIKV--GHYATLAFRAAKKLGEAVTDIVGDGYEAMHLRDTGEKLSFLGML--RDSVSG 184 Query: 2548453 FVKSLAANPKQFNDFGPRLGEI---AAPTLVIWGRDDRFVPMDVGLRLVAGMQNAEMH 2548289 AA D P L + PT V+ G D+ VP + GL A + NA + Sbjct: 185 LRFVRAAFALMKADTTPLLHAMYRHGVPTAVLHGLHDQIVPYEAGLS-TAKITNASFY 241 Score = 43.5 bits (101), Expect = 0.094 Identities = 51/215 (23%), Positives = 80/215 (37%), Gaps = 16/215 (7%) Frame = +1 Query: 1235446 IELRSGLHMPYVEAGEGELLLFVHGSLCDYRYWQPQLTGLSKH-YRCVAVSLTHYWPAAD 1235622 I L G + G G L+F+HG + ++ LT L++H +R +A+ ++ + Sbjct: 6 IVLADGFRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGS 65 Query: 1235623 TDPGLPFSWSEHADEVAEFIERFGAGPAHVVGHSRGGCVAFHFARRHAQHVRTLTLADP- 1235799 G + + + ++ A GHS GG + A RH V L D Sbjct: 66 LPTG--HTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAA 123 Query: 1235800 -----------GGPLQIAGRPPASLPETVNALRS---KAAQLIESGEVEAGLQLFVDSVS 1235937 G +A R L E V + +A L ++GE + L + DSVS Sbjct: 124 AGQEHHDNIKVGHYATLAFRAAKKLGEAVTDIVGDGYEAMHLRDTGEKLSFLGMLRDSVS 183 Query: 1235938 RPGFWAMSTPGFRRMATDNAHTLARQFRDPLPAYV 1236042 F F M D L +R +P V Sbjct: 184 GLRF---VRAAFALMKADTTPLLHAMYRHGVPTAV 215 Score = 43.5 bits (101), Expect = 0.094 Identities = 29/73 (39%), Positives = 36/73 (49%) Frame = +2 Query: 2366810 HDFRVIALDQRNAGQSTGPLADGNPWDQYAADHLGLLDHLGIERCHVMGCCIGASYALNL 2366989 H FRVIALD N G+S G L G+ + L LD L I R G +G + + Sbjct: 48 HGFRVIALDAANHGRS-GSLPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEI 106 Query: 2366990 ARLAPSRVASLVL 2367028 A P RVA+ VL Sbjct: 107 AARHPHRVAAAVL 119 Score = 41.2 bits (95), Expect = 0.46 Identities = 29/101 (28%), Positives = 42/101 (41%) Frame = +1 Query: 2767468 GYVKVGNGPRKVLAMSGWFGSAEDWQPLVPSLDTDEFTYVFFDYRGYGRSRERDGAFTFE 2767647 G VG G V + G SA+ ++ ++ L F + D +GRS T E Sbjct: 15 GVSTVGTGAPLVF-LHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHTVE 73 Query: 2767648 EAAQDVLALADHLDWDRFSLIGHSMGGVAIQRVLLAAPARI 2767770 + + L D LD R GHSMGG + + P R+ Sbjct: 74 DMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRV 114 >ref|YP_164275.1|DNA adenine methyltransferase Length = 284 Score = 81.3 bits (199), Expect = 4e-13 Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 6/182 (3%) Frame = -3 Query: 2170188 PIIPWIGGKRRLADVLIPRFPSHSCYVEVFAGAAALFFMRPPAEVEVLNDVNDELINLYR 2170009 PI+ + GGK LA +I H Y+E F GAA++ + + EV ND++ +++NL+R Sbjct: 6 PILRYHGGKWLLAPWIIQHLAPHHTYIEPFGGAASVLLRKARSYAEVYNDLDGDVVNLFR 65 Query: 2170008 VVQHHLEEFVRQFKWALSSREVFRWLSETPPHTLTDIQRAARFYYLQQNCFG-GRVEGRT 2169832 V + EE + +RE F + T ++RA R FG G Sbjct: 66 VARDRGEELRQALALTPFAREEF---EASYAETTDPLERARRMVVRSFQGFGSAAASGER 122 Query: 2169831 FGTATTS-----PPGLNLLRIEETLSAAHLRLSGAYIEKLDWQTCMARYDRPHMCFYLDP 2169667 G +TS P L+ + L++ RL G IE D M +DRP Y+DP Sbjct: 123 TGFRSTSARSGTAPALDWRNYPDALASITERLQGVVIENRDALVLMEHHDRPSTLHYVDP 182 Query: 2169666 PY 2169661 PY Sbjct: 183 PY 184 >ref|NP_858986.1|DNA polymerase lacking N-terminal exonuclease domain Length = 794 Score = 80.9 bits (198), Expect = 5e-13 Identities = 87/345 (25%), Positives = 140/345 (40%), Gaps = 62/345 (17%) Frame = -2 Query: 3130531 GAPSTDEEVLQKLAEDFPLPKILLEHRGLSKLKS---TY-------TDKLPRMVN--ATT 3130388 G T EEV Q LA P+ + ++ +++ TY T + M++ + Sbjct: 379 GQYKTGEEVTQALASWEDAPEFVQQYAAQARITKDLGTYYYTVDPETGETKGMLSLVGSD 438 Query: 3130387 GRVHTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIA--PAGHKLVSADYSQIE 3130214 G VH VTGRL+S PNLQN+P G+ ++ F++ P G +V +D++ +E Sbjct: 439 GIVHHQLQMVNTVTGRLSSALPNLQNLP--KGDKSEVKTLFVSRFPGGF-IVQSDFTALE 495 Query: 3130213 LRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVT--------------PLEVSNDQRRV 3130076 + + ++SGD +L+ G D+H A+ V+ V N +R Sbjct: 496 IYVQGNLSGDIALIADLRAGLDMHCKRLAQKEGVSYDYVFERAKDKKHIEYIVWNSKRSK 555 Query: 3130075 AKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETRVSAK------ 3129914 AK +F YG + +A+ G+T D K I YPG+ Y T + Sbjct: 556 AKGFSFQRAYGAGAAAIAAATGMTVDEVKEMIRIEDEMYPGIPEYNKRTMKELERNLIPS 615 Query: 3129913 ----------------AKGYVETVFGRRL---------WLPEINGGNGPRRQAAERAAIN 3129809 K Y T G+R WL E G + + N Sbjct: 616 KMYIASSYEAGVSLNLGKSYFRTPDGKRYTMYQTQAPKWLWE---REGVQLTFSSTTTKN 672 Query: 3129808 APMQGTAADLIKLSM-IAVQKWIEESKIGTR--MIMQVHDELILE 3129683 P+QGT + +K +M + VQ+W G R ++ VHD ++ Sbjct: 673 YPVQGTGGEWMKAAMALIVQQWYARGNFGGRSLIVNTVHDAAYID 717 >ref|NP_899330.1|DNA polymerase Length = 850 Score = 80.5 bits (197), Expect = 7e-13 Identities = 126/567 (22%), Positives = 219/567 (38%), Gaps = 90/567 (15%) Frame = -1 Query: 1022282 CETRAQLLEK-LNAWLERHDPDAIIGWNLVQFDLRVLQQHAEQY---RIPLRLGRGGAV- 1022118 C T +LL K L W E+ P + GWN+ FD+ + + ++ L G V Sbjct: 171 CATEKELLVKYLQFWREK-TPAIVTGWNIESFDMPYIVNRYKNLFGEKVMNSLSPWGKVQ 229 Query: 1022117 MEWREHGLKQNHFFAGAAGRLIIDGIEALRSATW-SFPSFSLEHVARSVLGEGKSIDNPY 1021941 + + Q G +D ++ + T+ + PS+ L+++ L E K + Sbjct: 230 VSTTVNDYGQEICKVNILGVSELDYLQLYKKFTYVTRPSYRLDYIGEVELDEKKV---EF 286 Query: 1021940 QRMDEIQRRFDEDKPALAQYNLKDCELVTRIFAKTDLLPFLLERASVTGLPADRSGGSVA 1021761 ++ + ++ +++D Y ++D LV R+ K L+ + A G+ G++ Sbjct: 287 EQANYLEF-YEQDYQNFIDYQIQDVNLVKRLDEKLQLMLLTISLAYYAGINYQTVLGTIK 345 Query: 1021760 AFTHLYMPRMHRQGYVAPNLGDVAGAASPGGFVMDSRPGLYDSVLVLDYKSLYPSIIRTF 1021581 + + + + V P + G G FV + G + + D SLYPSIIR Sbjct: 346 PWDAIIFNSLKAEKKVVPMMRSHEGGRFMGAFVKAPQVGYHRGIGSFDLTSLYPSIIREC 405 Query: 1021580 LIDPAGLV-----EGMLNPADDQSVPGFL------------GARFSR-TRHCLPSIVGQV 1021455 I P +V EG L D+ V G + G ++ + R +P + +V Sbjct: 406 NISPETIVGQLDYEGSLEDRIDKIVEGLITFPADELSNSANGMQYRKDVRGVIPVEIEKV 465 Query: 1021454 WQGRETAKRENNKPLSQAL------------------------------------KIIMN 1021383 + R+ K++ + QA+ KI++N Sbjct: 466 FFQRKANKKKAFEYEQQAIDIQKQMDEQGETPELRAAYEEAKHQAKIYDVQQMARKILIN 525 Query: 1021382 AFYGVLGSTGCRFFDPRLASSITMRGH-EIMHATREL---------IQGEGYEVIYGDTD 1021233 + YG LG+ RF+D R A ++T G I R++ + Y VIYGDTD Sbjct: 526 SLYGALGNEYFRFYDLRNAEAVTAYGQLAIKWVARDVNIWLNKVCKTTDKDY-VIYGDTD 584 Query: 1021232 STFV---------WLRHAHGEEDASRIGHAL----VEHINAWWRQNLRERFGLDSALELQ 1021092 S +V + G++ + + IN + AL Sbjct: 585 SIYVNFDPLLELTGINKLEGDDYTDKFAKVCETVETKVINPSY-----------EALHKY 633 Query: 1021091 FERHYRRFFMPTVRGAEEG---SKKRYAGLTVLPDG--REDIVYKGLETVRTDWTPLAQQ 1020927 + R+ FM A G +KKRYA +G + + G+ET R+ PL Q+ Sbjct: 634 MNTYERQMFMDREVLARTGFFIAKKRYALDVQDNEGIRKPKLKIMGIETQRSSTPPLCQK 693 Query: 1020926 FQQELYRRIFT--RQPYQDYVRDYVRD 1020852 +E R I Q++V+ Y ++ Sbjct: 694 GLKEAIRLILQEGEAKLQEFVKGYEKE 720 >ref|NP_112710.1|ORF47 Length = 918 Score = 80.1 bits (196), Expect = 9e-13 Identities = 48/105 (45%), Positives = 57/105 (54%), Gaps = 3/105 (2%) Frame = -1 Query: 2312468 SPFGNRIDPFTHRLSFHPGLDLV-ARTGTPILAAAGGRVVFAGEK--SGYGNAVEIDHGN 2312298 S G R P T FH +DLV TPILA+ G+VV AG YGN I H + Sbjct: 794 SEMGWRTSPITGAQEFHNAMDLVNGNPTTPILASGDGQVVQAGSNYYDWYGNYTVIKHAD 853 Query: 2312297 GLMTRYGHASRLVVHVGDLVLPRQYIADVGSTGRSTGPHLHFEVL 2312163 GL T Y H SR+ V VG V Q I +G+TG TGPHLHF+ + Sbjct: 854 GLYTGYAHQSRIDVSVGQNVKKGQQIGLMGATGPVTGPHLHFQFM 898 Score = 52.0 bits (123), Expect = 3e-04 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -2 Query: 2420680 VIGGRPGDPVKAAATGRVVYAGSGI-EAYGPLIIIKHDDSLITAYGQNSTLLVKEGDAVA 2420504 ++ G P P+ A+ G+VV AGS + YG +IKH D L T Y S + V G V Sbjct: 815 LVNGNPTTPILASGDGQVVQAGSNYYDWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVK 874 Query: 2420503 QGQTIGEVG 2420477 +GQ IG +G Sbjct: 875 KGQQIGLMG 883 Score = 48.1 bits (113), Expect = 0.004 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = -2 Query: 1863103 ISGKPGDPVRAAAGGKVMYAGTGLNS-YGSLIIVQHNKDFLTAYSHNRKLLVKTGDIVVQ 1862927 ++G P P+ A+ G+V+ AG+ YG+ +++H T Y+H ++ V G V + Sbjct: 816 VNGNPTTPILASGDGQVVQAGSNYYDWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVKK 875 Query: 1862926 GQQIAEMG 1862903 GQQI MG Sbjct: 876 GQQIGLMG 883 >ref|NP_076626.1|endopeptidase Length = 894 Score = 80.1 bits (196), Expect = 9e-13 Identities = 48/105 (45%), Positives = 57/105 (54%), Gaps = 3/105 (2%) Frame = -1 Query: 2312468 SPFGNRIDPFTHRLSFHPGLDLV-ARTGTPILAAAGGRVVFAGEK--SGYGNAVEIDHGN 2312298 S G R P T FH +DLV TPILA+ G+VV AG YGN I H + Sbjct: 770 SEMGWRTSPITGAQEFHNAMDLVNGNPTTPILASGDGQVVQAGSNYYDWYGNYTVIKHAD 829 Query: 2312297 GLMTRYGHASRLVVHVGDLVLPRQYIADVGSTGRSTGPHLHFEVL 2312163 GL T Y H SR+ V VG V Q I +G+TG TGPHLHF+ + Sbjct: 830 GLYTGYAHQSRIDVSVGQNVKKGQQIGLMGATGPVTGPHLHFQFM 874 Score = 52.0 bits (123), Expect = 3e-04 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -2 Query: 2420680 VIGGRPGDPVKAAATGRVVYAGSGI-EAYGPLIIIKHDDSLITAYGQNSTLLVKEGDAVA 2420504 ++ G P P+ A+ G+VV AGS + YG +IKH D L T Y S + V G V Sbjct: 791 LVNGNPTTPILASGDGQVVQAGSNYYDWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVK 850 Query: 2420503 QGQTIGEVG 2420477 +GQ IG +G Sbjct: 851 KGQQIGLMG 859 Score = 48.1 bits (113), Expect = 0.004 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = -2 Query: 1863103 ISGKPGDPVRAAAGGKVMYAGTGLNS-YGSLIIVQHNKDFLTAYSHNRKLLVKTGDIVVQ 1862927 ++G P P+ A+ G+V+ AG+ YG+ +++H T Y+H ++ V G V + Sbjct: 792 VNGNPTTPILASGDGQVVQAGSNYYDWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVKK 851 Query: 1862926 GQQIAEMG 1862903 GQQI MG Sbjct: 852 GQQIGLMG 859 >ref|NP_108727.1|minor structural protein 3 Length = 906 Score = 79.7 bits (195), Expect = 1e-12 Identities = 48/105 (45%), Positives = 58/105 (55%), Gaps = 3/105 (2%) Frame = -1 Query: 2312468 SPFGNRIDPFTHRLSFHPGLDLV-ARTGTPILAAAGGRVVFAGEK--SGYGNAVEIDHGN 2312298 S G R P T FH +DLV TPILA+ G+VV AG + YGN I H + Sbjct: 782 SEMGWRTSPITGAQEFHNAMDLVNGNPTTPILASNDGQVVQAGSNYYNWYGNYTVIKHAD 841 Query: 2312297 GLMTRYGHASRLVVHVGDLVLPRQYIADVGSTGRSTGPHLHFEVL 2312163 GL T Y H SR+ V VG V Q I +G+TG TGPHLHF+ + Sbjct: 842 GLYTGYAHQSRIDVSVGQNVKKGQQIGLMGATGPVTGPHLHFQFM 886 Score = 50.4 bits (119), Expect = 8e-04 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = -2 Query: 2420680 VIGGRPGDPVKAAATGRVVYAGSGI-EAYGPLIIIKHDDSLITAYGQNSTLLVKEGDAVA 2420504 ++ G P P+ A+ G+VV AGS YG +IKH D L T Y S + V G V Sbjct: 803 LVNGNPTTPILASNDGQVVQAGSNYYNWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVK 862 Query: 2420503 QGQTIGEVG 2420477 +GQ IG +G Sbjct: 863 KGQQIGLMG 871 Score = 49.3 bits (116), Expect = 0.002 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Frame = -2 Query: 1863103 ISGKPGDPVRAAAGGKVMYAGTGL-NSYGSLIIVQHNKDFLTAYSHNRKLLVKTGDIVVQ 1862927 ++G P P+ A+ G+V+ AG+ N YG+ +++H T Y+H ++ V G V + Sbjct: 804 VNGNPTTPILASNDGQVVQAGSNYYNWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVKK 863 Query: 1862926 GQQIAEMG 1862903 GQQI MG Sbjct: 864 GQQIGLMG 871 >ref|YP_024841.1|Pas55 Length = 1415 Score = 79.7 bits (195), Expect = 1e-12 Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 10/338 (2%) Frame = -2 Query: 3130543 KTP-SGAPSTDEEVLQKLAEDFP-LPKILLEHRGLSKL---KSTYTDKLPRMVNATTGRV 3130379 +TP SG T E ++ LA ++ LPK+ + + ++ +S Y + M + GRV Sbjct: 1106 RTPNSGQFDTSGEHMKHLAREYHHLPKVREIAKHVFRIVGARSVYQTLMDNM--SPDGRV 1163 Query: 3130378 HTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAP-AGHKLVSADYSQIELRIM 3130202 H A TGR + P L + R G R + A + P G L+SAD SQ+++R + Sbjct: 1164 HPKIGFDQA-TGRWSVTRPGLTVLGKRGG--RHVERAVLLPDPGEVLMSADLSQVDMRAV 1220 Query: 3130201 AHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLA 3130022 A +S D + + + +D H A E+F D+R AK I G YG ++ Sbjct: 1221 AGLSQDLAYIEMLKK-DDPHAEIAKELFGTA------DRREEAKAIGHGWNYGRGIKAIS 1273 Query: 3130021 SNLGITRDAAKLYIDRYFARYPGVARYMDETRVSAKAKGYVETVFGRRLWLPEINGGNGP 3129842 I + + R+ + + E R A+A ++ FGR + Sbjct: 1274 EGQEIEPALVRRFDASMRERFGRLVEWQTEVRAVAEAGQLLDNGFGRLM----------- 1322 Query: 3129841 RRQAAERAAINAPM---QGTAADLIKLSMIAVQKWIEESKIGTRMIMQVHDELILEVPDA 3129671 R +RA P QG A D++ ++ + + +I + Q+HDE++ VP A Sbjct: 1323 -RADPQRAHTQGPALMGQGAARDIMMTGLLRLDR-----RILPMLRAQIHDEIVFSVPVA 1376 Query: 3129670 ELSDVRKRLPELMCGVADLKVPLVAEVG-AGLNWEEAH 3129560 E +V + + E + VP++A+V G +W + Sbjct: 1377 EAEEVGRAVVEAL-SFEWRGVPILADVSKTGTDWSRCY 1413 >ref|NP_663686.1|structural protein Length = 908 Score = 79.3 bits (194), Expect = 2e-12 Identities = 48/105 (45%), Positives = 57/105 (54%), Gaps = 3/105 (2%) Frame = -1 Query: 2312468 SPFGNRIDPFTHRLSFHPGLDLV-ARTGTPILAAAGGRVVFAGEK--SGYGNAVEIDHGN 2312298 S G R P T FH +DLV TPILA+ G+VV AG YGN I H + Sbjct: 784 SEMGWRTSPITGAQEFHNAMDLVNGNPTTPILASNDGQVVQAGSNYYDWYGNYTVIKHAD 843 Query: 2312297 GLMTRYGHASRLVVHVGDLVLPRQYIADVGSTGRSTGPHLHFEVL 2312163 GL T Y H SR+ V VG V Q I +G+TG TGPHLHF+ + Sbjct: 844 GLYTGYAHQSRIDVSVGQNVKKGQQIGLMGATGPVTGPHLHFQFM 888 Score = 51.2 bits (121), Expect = 4e-04 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -2 Query: 2420680 VIGGRPGDPVKAAATGRVVYAGSGI-EAYGPLIIIKHDDSLITAYGQNSTLLVKEGDAVA 2420504 ++ G P P+ A+ G+VV AGS + YG +IKH D L T Y S + V G V Sbjct: 805 LVNGNPTTPILASNDGQVVQAGSNYYDWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVK 864 Query: 2420503 QGQTIGEVG 2420477 +GQ IG +G Sbjct: 865 KGQQIGLMG 873 Score = 47.4 bits (111), Expect = 0.006 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = -2 Query: 1863103 ISGKPGDPVRAAAGGKVMYAGTGLNS-YGSLIIVQHNKDFLTAYSHNRKLLVKTGDIVVQ 1862927 ++G P P+ A+ G+V+ AG+ YG+ +++H T Y+H ++ V G V + Sbjct: 806 VNGNPTTPILASNDGQVVQAGSNYYDWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVKK 865 Query: 1862926 GQQIAEMG 1862903 GQQI MG Sbjct: 866 GQQIGLMG 873 >ref|NP_943827.1|gp49 Length = 429 Score = 77.8 bits (190), Expect = 4e-12 Identities = 49/111 (44%), Positives = 60/111 (54%), Gaps = 10/111 (9%) Frame = -1 Query: 2312426 SFHPGLDLVARTGTPILAAAGGRVVFAGEKSGYGNAVEIDH---GNGLMTRYGH---ASR 2312265 S H GLD A+ GTPI AA GG V + G G+G + IDH G T YGH A Sbjct: 18 SQHRGLDFAAKDGTPIYAAQGGTVAYIGRADGFGQWIVIDHPAADGGGTTVYGHMWDAFA 77 Query: 2312264 LVVHVGDLVLPRQYIADVGSTGRSTGPHLHFE----VLVNGAPVNPVAYLA 2312124 + G V Q IA VG+ G+STGPHLHFE V G+ ++P +LA Sbjct: 78 TGLRQGQRVEAGQLIAYVGTNGQSTGPHLHFEVHPTVWRQGSQIDPKPWLA 128 Score = 50.1 bits (118), Expect = 0.001 Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 14/122 (11%) Frame = -2 Query: 1863136 GFQP---GETRGIEISGKPGDPVRAAAGGKVMYAGTGLNSYGSLIIVQH---NKDFLTAY 1862975 GF P + RG++ + K G P+ AA GG V Y G + +G I++ H + T Y Sbjct: 11 GFGPRWGSQHRGLDFAAKDGTPIYAAQGGTVAYIGRA-DGFGQWIVIDHPAADGGGTTVY 69 Query: 1862974 SHNRKLL---VKTGDIVVQGQQIAEMGDENNSR-VSLGFELR----RDGKPIDPMPYLPQ 1862819 H ++ G V GQ IA +G S L FE+ R G IDP P+L Sbjct: 70 GHMWDAFATGLRQGQRVEAGQLIAYVGTNGQSTGPHLHFEVHPTVWRQGSQIDPKPWLAN 129 Query: 1862818 GR 1862813 R Sbjct: 130 AR 131 Score = 42.7 bits (99), Expect = 0.16 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 11/107 (10%) Frame = -2 Query: 2420686 GIVIGGRPGDPVKAAATGRVVYAGSGIEAYGPLIIIKH---DDSLITAYGQNSTLL---V 2420525 G+ + G P+ AA G V Y G + +G I+I H D T YG + Sbjct: 22 GLDFAAKDGTPIYAAQGGTVAYIGRA-DGFGQWIVIDHPAADGGGTTVYGHMWDAFATGL 80 Query: 2420524 KEGDAVAQGQTIGEVGMDSRGVA-SIQFEVR----QNGQPVDPLAWL 2420399 ++G V GQ I VG + + + FEV + G +DP WL Sbjct: 81 RQGQRVEAGQLIAYVGTNGQSTGPHLHFEVHPTVWRQGSQIDPKPWL 127 >ref|NP_523322.1|gene 5B protein Length = 372 Score = 77.0 bits (188), Expect = 8e-12 Identities = 91/358 (25%), Positives = 148/358 (41%), Gaps = 29/358 (8%) Frame = -2 Query: 3130546 KKTPSGAPSTDEEVLQKLAEDFPLPK----ILLEHRGLSKL--KSTYTDKLPRMVNATTG 3130385 K T GAP D+EVL+ + D P + ++ E+ + K +S DK A G Sbjct: 23 KFTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDG 82 Query: 3130384 RVHTNYAQAVAVTGRLASNDPNLQNIP-VRTGEGRRIREAFIAP------AGHKLVSA-- 3130232 ++H + AVTGR PNL IP VR+ G + R AF A G V A Sbjct: 83 KIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGI 142 Query: 3130231 DYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGL 3130052 D S +ELR +AH + F GE H +I + + R AK +G Sbjct: 143 DASGLELRCLAH------FMARFDNGEYAHEILNGDIHTKNQMAAELPTRDNAKTFIYGF 196 Query: 3130051 IYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETR----VSAKAKGYVETVFG 3129884 +YG + +G ++ K ++ P +A + + S++ + V Sbjct: 197 LYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKW 256 Query: 3129883 RRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESKI------GT 3129722 +R W+ ++G R + AA+N +Q A + KL +I ++ + E + Sbjct: 257 KRRWIKGLDGRKVHVR--SPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDF 314 Query: 3129721 RMIMQVHDELILEVPDAELS-DVRKRLPELMCGVAD---LKVPLVAEVGAGLNWEEAH 3129560 + +HDE+ + E++ V + E M V + + L E G NW+E H Sbjct: 315 AYMAWIHDEIQVACRTEEIAKTVIEVAQEAMRWVGEHWNFRCLLDTEGKMGANWKECH 372 >ref|NP_523320.1|DNA polymerase Length = 704 Score = 77.0 bits (188), Expect = 8e-12 Identities = 91/358 (25%), Positives = 148/358 (41%), Gaps = 29/358 (8%) Frame = -2 Query: 3130546 KKTPSGAPSTDEEVLQKLAEDFPLPK----ILLEHRGLSKL--KSTYTDKLPRMVNATTG 3130385 K T GAP D+EVL+ + D P + ++ E+ + K +S DK A G Sbjct: 355 KFTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDG 414 Query: 3130384 RVHTNYAQAVAVTGRLASNDPNLQNIP-VRTGEGRRIREAFIAP------AGHKLVSA-- 3130232 ++H + AVTGR PNL IP VR+ G + R AF A G V A Sbjct: 415 KIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGI 474 Query: 3130231 DYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGL 3130052 D S +ELR +AH + F GE H +I + + R AK +G Sbjct: 475 DASGLELRCLAH------FMARFDNGEYAHEILNGDIHTKNQMAAELPTRDNAKTFIYGF 528 Query: 3130051 IYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETR----VSAKAKGYVETVFG 3129884 +YG + +G ++ K ++ P +A + + S++ + V Sbjct: 529 LYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKW 588 Query: 3129883 RRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESKI------GT 3129722 +R W+ ++G R + AA+N +Q A + KL +I ++ + E + Sbjct: 589 KRRWIKGLDGRKVHVR--SPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDF 646 Query: 3129721 RMIMQVHDELILEVPDAELS-DVRKRLPELMCGVAD---LKVPLVAEVGAGLNWEEAH 3129560 + +HDE+ + E++ V + E M V + + L E G NW+E H Sbjct: 647 AYMAWIHDEIQVACRTEEIAKTVIEVAQEAMRWVGEHWNFRCLLDTEGKMGANWKECH 704 >ref|NP_046614.1|histone-like prokaryotic DNA-binding protein family Length = 92 Score = 77.0 bits (188), Expect = 8e-12 Identities = 40/91 (43%), Positives = 53/91 (58%) Frame = +1 Query: 1053517 MNKQELIDAVAAATGESKAATGQTIDAIVEAVTKAVVGGDTVQLVGFGSFSTGARAARVG 1053696 MNK ELI VA G SK +++ + + +++A+ G+ V + GFG+F RAAR G Sbjct: 1 MNKTELIAKVAEKQGVSKKEGAPSVEKVFDTISEALKSGEKVSIPGFGTFEVRERAARKG 60 Query: 1053697 RNPSTGAEIQIAAAKTVKFTAGKAFKEAVNA 1053789 RNP TG EI I A K F KA K+AV A Sbjct: 61 RNPQTGEEIDIPATKAPAFKPAKALKDAVKA 91 >ref|NP_040655.1|unknown protein Length = 430 Score = 76.6 bits (187), Expect = 1e-11 Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 1/178 (0%) Frame = +3 Query: 3236415 AVEN-GDAYVLAAPELNTKSGGTASFLAGGQVPIPQSGALGTTSIEYKDYGIKLSIVPVV 3236591 A+EN G+ V++ P L T +AS L G ++P QS G TS+ +K + L + PV+ Sbjct: 251 AMENEGNGRVVSRPTLLTLDRQSASVLRGTELPYQQSAGDGATSVAFKHAALSLEVKPVI 310 Query: 3236592 DANNIISAHLTTEISQIDPSVTYAGMPGFLTRNTSSDISMRAGETLAISGLVSADAANDS 3236771 +N I + + S G+P T + I + G+T+ + G+ S S Sbjct: 311 SPDNSIVIEVLVSRDSPNFSNAIDGVPPIDTNRLVTTIRVPHGQTVVLGGVYSTINQQGS 370 Query: 3236772 NGMPFLSQVPIIGQLFRSDRFRAKKSDLVIFVTPVISDPELSPNTDLLARADKLDENF 3236945 + + +S++P IG+LF+ ++ +L+IF+TP I E+ P L DE+F Sbjct: 371 SRVSGISRIPGIGRLFKKKEHVTEQYELLIFLTPRILGLEVEPEKQSLV----FDESF 424 >ref|NP_046865.1|putative ribonucleotide reductase Length = 693 Score = 76.3 bits (186), Expect = 1e-11 Identities = 104/428 (24%), Positives = 157/428 (36%), Gaps = 4/428 (0%) Frame = +2 Query: 1872317 MDVFDASCRTVESAGSRRGAQMAVLDCNHPDLLEFIEAKHSKGRWNNFNVSVGVTDEFMR 1872496 M++ A + V + G RR A+MA++ + F K G N+SV V D F Sbjct: 261 MEIDHAIAQCVVAGGVRRSARMAMMHWADWQVETFTNIKQDSGSHWTTNISVEVDDAF-- 318 Query: 1872497 AVEEDQPWQLVHRAEPSPAQRAADDVRQREDGLWVYSERPAREIWDRIMRSTYDVAEPGI 1872676 W L A+ D + R A + + EPG+ Sbjct: 319 -------WSL--------AKAPVDPLNPRST--------KAHRVLKALSEGAVRNGEPGM 355 Query: 1872677 --VFISRMNEDNNLRAVETIRATNPCGEQPLPAYGCCNLGPLNLTRFVIDPFAQIKGRKP 1872850 +S + E N + TNPCGE L + CNLG +NL FV D Sbjct: 356 WDSSLSNVGEPNE------VVCTNPCGEITLEPWEPCNLGHINLAAFVTD--------AG 401 Query: 1872851 SFDWDGLAKRTRTQVRFLDNVLDVTLWPLPQQYEESRAKRRIGVGFTGLGDTLVMLGLRY 1873030 D+ L + R RFL + P+ E RRIGVG G+ L + G RY Sbjct: 402 KTDYIDLIRAHRLMTRFLIRATFSAVAD-PKSREVLDRNRRIGVGHLGVASYLALTGRRY 460 Query: 1873031 NSQEGRDFAVGIAQLMRDEAYRASVELARERGAFPLFDAARYLETGTFASRLPEDIKQAI 1873210 + G + M E RA+ E + E R+P +K+ Sbjct: 461 SQAPGDKRFTAFLREMAAEVDRAAEEFSHE-------------------LRIPVPVKKR- 500 Query: 1873211 RRDGIRNSHLLSIAPTGTVSLAFADNASNGIEPAFS-WTYTRMKVMADGSRESFDVEDYA 1873387 ++APTGT+ A S GI P FS + R++ + + YA Sbjct: 501 -----------TVAPTGTI--AKMPGVSEGIHPIFSRYFIRRIRFSVLDNDQFLTASQYA 547 Query: 1873388 YRLYRELGGDVNRLPDYFVSALEMSARDHLDMMAAVQPYVDT-SISKTVNVPADYPFEAF 1873564 Y ++ + +V +E+ +D L A + D I ++ N + AF Sbjct: 548 ADGYHVEKDQYDKSGNTWV--VEIPTKDTLVEAVAARFGRDAEDIVESANELTLHQLLAF 605 Query: 1873565 ESLYLDAW 1873588 ++LY W Sbjct: 606 QALYQTCW 613 >ref|NP_599080.1|unknown Length = 350 Score = 75.5 bits (184), Expect = 2e-11 Identities = 37/96 (38%), Positives = 56/96 (58%) Frame = -1 Query: 3187217 IQLLNRDFLSDVANIPDGSIDLILCDPPYGLGKDYGNDSDMRTGDDFLSWTRGWLELAIP 3187038 + L+N D L + ++PD SIDLI+ DPPY K G D+ + +D+L W L Sbjct: 10 VDLINADCLHFIQSLPDDSIDLIVTDPPYFKVKPNGWDNQWKGDEDYLKWLDHCLAQFWR 69 Query: 3187037 KLKPSGSLYIFCTWQYAPEIFSFLKTKLTMINEIIW 3186930 LKP+GSLY+FC + A +I ++ + ++N IIW Sbjct: 70 VLKPAGSLYLFCGHRLASDIEIMMRERFNVLNHIIW 105 >ref|NP_041982.1|DNA polymerase Length = 704 Score = 75.5 bits (184), Expect = 2e-11 Identities = 92/358 (25%), Positives = 146/358 (40%), Gaps = 29/358 (8%) Frame = -2 Query: 3130546 KKTPSGAPSTDEEVLQKLAEDFPLPK----ILLEHRGLSKL--KSTYTDKLPRMVNATTG 3130385 K T GAP D+EVL+ + D P + ++ E+ + K +S DK A G Sbjct: 355 KYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDG 414 Query: 3130384 RVHTNYAQAVAVTGRLASNDPNLQNIP-VRTGEGRRIREAFIAP------AGHKLVSA-- 3130232 ++H + AVTGR PNL IP VR+ G + R AF A G V A Sbjct: 415 KIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGI 474 Query: 3130231 DYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGL 3130052 D S +ELR +AH + F GE H +I + + R AK +G Sbjct: 475 DASGLELRCLAH------FMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGF 528 Query: 3130051 IYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETR----VSAKAKGYVETVFG 3129884 +YG + +G ++ K ++ P +A + + S++ + V Sbjct: 529 LYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKW 588 Query: 3129883 RRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESKI------GT 3129722 +R W+ ++G R + AA+N +Q A + KL +I ++ + E + Sbjct: 589 KRRWIKGLDGRKVHVR--SPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDF 646 Query: 3129721 RMIMQVHDELILEVPDAELSD-VRKRLPELMCGVAD---LKVPLVAEVGAGLNWEEAH 3129560 + VHDE+ + E++ V + E M V D + L E G NW H Sbjct: 647 AYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH 704 >ref|NP_817650.1|gp61 Length = 274 Score = 75.1 bits (183), Expect = 3e-11 Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 2/234 (0%) Frame = -3 Query: 1990044 TIKTKDGTEIFYKDWGKGRPVVFSHGWPLTADAWDAQMLFLGSKGFRVIAHDRRGHGRSQ 1989865 TI DG + G G P+VF HG ++A A++ ++ L +GF V A D HGR+ Sbjct: 7 TIVLDDGFRVGVSQVGTGVPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTD 66 Query: 1989864 QPWDGNDMDTYADDLAALIEHLDLKDATLVGHSTGGGEVAHYIGRHGTQRVAKAVLIGAV 1989685 G+ ++ ++ L + A VGHS GGG VA R+ +RV A+L+ A Sbjct: 67 SLPFGHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPRY-PERVLAAILLDAA 125 Query: 1989684 PPLMLKTGSNPGGTPLEVFDGIRKGVEDDRSQFFKDLALPFYGYNRPGAKVSQGVIDSFW 1989505 K PL + V D ++ + L G ++Q + SF Sbjct: 126 AG---KEHHANLKDPLRATQRLSGAVVDVLGDTYQAIKL---RSATEGLGLAQTLRSSF- 178 Query: 1989504 VQGMAG--SIKGLYDCIKQFSEVDYTEDLKKIDVPTLVLHGDDDQIVPIDAAGR 1989349 AG ++ Y +K +E + +K +DV T V+HG DQIVP AAG+ Sbjct: 179 ----AGFRFVRAAYALLKADTE-PLLKAMKALDVQTAVIHGLSDQIVPF-AAGK 226 Score = 68.2 bits (165), Expect = 4e-09 Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 2/241 (0%) Frame = -1 Query: 39413 GQTISYLELGDGPRTLLLLHGITSDASNWLSTMPALAQRGWRVIAPDQLGFGQSSKPSVP 39234 G + ++G G L+ LHG+T A + + LAQRG+ V A D + G++ Sbjct: 13 GFRVGVSQVGTGV-PLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDSLPFG 71 Query: 39233 VRPRTLSDMVAPLLDALGLEMVSIVGQSMGGHVAGLFAAQYPERVEALVLVNAGYGLA-L 39057 ++ + LDALG++ VG SMGG + A +YPERV A +L++A G Sbjct: 72 HTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDAAAGKEHH 131 Query: 39056 PEVKDPRDLGHAVTPGGLWALNPATRDDSRRLLEMVFHDQGL-VTEELIDGFYADRLGKG 38880 +KDP ++ + L D+ + +++ +GL + + L F R + Sbjct: 132 ANLKDPLRATQRLSGAVVDVLG-----DTYQAIKLRSATEGLGLAQTLRSSFAGFRFVRA 186 Query: 38879 DGAVIRSISESWARREDTLESAFTGLERRPVLVIQARQDKVAPYHLGRAIHEGIAGSRFV 38700 A++++ +E + L+ VI D++ P+ G++ E G+ + Sbjct: 187 AYALLKADTEPLLKAMKALDV--------QTAVIHGLSDQIVPFAAGKSAAEASGGALYA 238 Query: 38699 V 38697 V Sbjct: 239 V 239 Score = 62.8 bits (151), Expect = 1e-07 Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 10/221 (4%) Frame = +3 Query: 2975307 KMVIRSNGTRIHVTQQGSGELALVFLHYYGGSSRTWDAVAGELSDR-YRIIATDHRGWGD 2975483 K ++ +G R+ V+Q G+G + LVFLH S+ ++ + EL+ R + + A D G Sbjct: 6 KTIVLDDGFRVGVSQVGTG-VPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGR 64 Query: 2975484 SEAPADGYRIADLAADAEGVIEALGLRRYVLVGHSMGGKVAQLIASRRPRGLEGLVLV-- 2975657 +++ G+ + ++ ++ALG+ + V VGHSMGG + IA R P + +L+ Sbjct: 65 TDSLPFGHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDA 124 Query: 2975658 APSPPSPMLLSDEQRAT--LTGAYQTRESVEFVIDHVLTAKPLDAARR----ERVIEDSL 2975819 A L D RAT L+GA V V+ A L +A + + S Sbjct: 125 AAGKEHHANLKDPLRATQRLSGA------VVDVLGDTYQAIKLRSATEGLGLAQTLRSSF 178 Query: 2975820 RGAPQAKAGWPNV-AMREDISAATASIDAPTIVISGELDQV 2975939 G +A + + A E + A ++D T VI G DQ+ Sbjct: 179 AGFRFVRAAYALLKADTEPLLKAMKALDVQTAVIHGLSDQI 219 Score = 60.1 bits (144), Expect = 1e-06 Identities = 38/118 (32%), Positives = 57/118 (48%) Frame = -3 Query: 2613678 ITTKDGTQIYYKDWGTGQPITFSHGWPLDADAWDAQMLFLAERGYRVIAHDRRGHGRSSQ 2613499 I DG ++ GTG P+ F HG + A A++ ++ LA+RG+ V A D HGR+ Sbjct: 8 IVLDDGFRVGVSQVGTGVPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDS 67 Query: 2613498 PWNGNEMDTYXXXXXXXXXXXXLTNIVMVGHSTGGGEVVRYIGRHGTKRVARAVLIAA 2613325 G+ ++ + V VGHS GGG V R+ +RV A+L+ A Sbjct: 68 LPFGHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPRY-PERVLAAILLDA 124 Score = 47.4 bits (111), Expect = 0.006 Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 7/258 (2%) Frame = -2 Query: 648616 GAPTVILSHGLAADLSMWAPQL-DMLSRSFSVLCYDIRGHGGTSATPGDYSLALLADDVI 648440 G P V L HGL + L ++ R F+V D HG T + P +++ + + Sbjct: 24 GVPLVFL-HGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDSLPFGHTVEEMTRVTL 82 Query: 648439 ALMDSLGIASAHYVGLSLGGMIGQQLGAWHGER-LASLTLCATTSNAPKASWDARVHEAR 648263 +D+LGI A +VG S+GG + ++ + ER LA++ L A A+ + A Sbjct: 83 RALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDAAAGKEHHANLKDPL-RAT 141 Query: 648262 ARGIAPLVEATVDRWVTPAFK--REQPELMEQMRRMVLGTSLDGYAGSAAAIRDMELAPV 648089 R +V+ D + + E L + +R G + +A A+ + P+ Sbjct: 142 QRLSGAVVDVLGDTYQAIKLRSATEGLGLAQTLRSSFAGFR---FVRAAYALLKADTEPL 198 Query: 648088 L---GRIGVPTLVIAGEADTSTPLPILEHIADSIPAATLLTVPEAAHMPTMERPELCNPA 647918 L + V T VI G +D P + A++ A L E H + PEL Sbjct: 199 LKAMKALDVQTAVIHGLSDQIVPFAAGKSAAEASGGA--LYAVEGFHSWMLADPELAAEV 256 Query: 647917 LERFLLAHSSDQ*PLSSG 647864 + LL + L +G Sbjct: 257 IVFALLGFYPQRYLLGAG 274 Score = 46.2 bits (108), Expect = 0.014 Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 1/112 (0%) Frame = +1 Query: 187318 VDGAGSGALPLVLLHGIGSGAASWVQQF-EMLGATRRVLAWDAPGYGXXXXXXXXXXXXX 187494 V G+G +PLV LHG+ A ++ + E+ V A DA +G Sbjct: 18 VSQVGTG-VPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDSLPFGHTVEE 76 Query: 187495 XXXXXLKEWLDALGIERCVLLGHSLGAIIAGAFAVTHAQRVAGLLLLSPAGG 187650 L+ LDALGI++ V +GHS+G + A + +RV +LL A G Sbjct: 77 MTRVTLRA-LDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDAAAG 127 Score = 46.2 bits (108), Expect = 0.014 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 4/189 (2%) Frame = +1 Query: 700474 FRVLRYDTRGHGHSEAPKGPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAAR 700653 F V D HG +++ +T+E++T L +D L I +A F G SMGG +A R Sbjct: 52 FAVTALDAVNHGRTDSLPFGHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPR 111 Query: 700654 HADRIERVALCNTAA-RIGSPEVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVVL 700830 + +R+ L + AA + + P R G A+ D VL + A + L Sbjct: 112 YPERVLAAILLDAAAGKEHHANLKDPLRATQRLSG--AVVD-VLGDTYQAIKLRSATEGL 168 Query: 700831 AMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIK---VPALVISGTHDLAATPAQGREL 701001 + + + + A+ AD P +K V VI G D A G+ Sbjct: 169 GLAQTLRSSFAGFRFVRAAYALLKADTEPLLKAMKALDVQTAVIHGLSDQIVPFAAGKSA 228 Query: 701002 AQAIAGARY 701028 A+A GA Y Sbjct: 229 AEASGGALY 237 Score = 45.4 bits (106), Expect = 0.025 Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 2/104 (1%) Frame = +2 Query: 336959 GTPAVLIHGFGGDLNNWLFNHADLAAHR-TVWALDLPGHGESGKAVETGGAEELADSVIA 337135 G P V +HG + +LA V ALD HG + EE+ + Sbjct: 24 GVPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDSLPFGHTVEEMTRVTLR 83 Query: 337136 FMDDRGIGNAHLIGHSMGALVAMTVAERAPERV-ASLSLIAGAG 337264 +D GI A +GHSMG + +A R PERV A++ L A AG Sbjct: 84 ALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDAAAG 127 Score = 45.1 bits (105), Expect = 0.032 Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 21/233 (9%) Frame = -2 Query: 587767 EGARIWYASYGAGVPVILLHGGLGHSGNWGYQLPALLGAGRRVVVVDSRGHGRSTRDARP 587588 +G R+ + G GVP++ LHG + + L L G V +D+ HGR+ D+ P Sbjct: 12 DGFRVGVSQVGTGVPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRT--DSLP 69 Query: 587587 YRY--ELMASDVLAVMDTLQLERAALVGWSDGACVAMVLGITAAERV---------AGVF 587441 + + E M L +D L +++A VG S G + + ERV AG Sbjct: 70 FGHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDAAAGKE 129 Query: 587440 FFGCNMDP-------SGTKTFAPTPTVERCFSRHAKDYAQLSATPDDFEA---FVGAVST 587291 DP SG T + R A + L+ T A FV A Sbjct: 130 HHANLKDPLRATQRLSGAVVDVLGDTYQAIKLRSATEGLGLAQTLRSSFAGFRFVRAAYA 189 Query: 587290 MMKTEPNYCADDLARVRVPVAIVHSEHDEFIEPEHADYLARTIPGAELILLSG 587132 ++K + + + V A++H D+ + P A A G L + G Sbjct: 190 LLKADTEPLLKAMKALDVQTAVIHGLSDQIV-PFAAGKSAAEASGGALYAVEG 241 >ref|YP_195185.1|ribonucleotide reductase A subunit Length = 776 Score = 75.1 bits (183), Expect = 3e-11 Identities = 90/425 (21%), Positives = 174/425 (40%), Gaps = 43/425 (10%) Frame = +2 Query: 1872164 EEGLPGIYVALLQAAETMRRGGGVGYNFSAIRPKGARVHTTSSSASGPCSYMDVFDASCR 1872343 ++ L I+ + + + + + G+G N IR +++ +G ++ F+A+ R Sbjct: 239 DDTLDSIFTSDMAIGKYVAQRAGIGINAGRIRGVNSKIRGGEVKHTGVIPFLKKFEATVR 298 Query: 1872344 TVESAGSRRGAQMAVLDCNHPDLLEFIEAKHSKGRWNN----FNVSVGVTDEFM-RAVEE 1872508 G R G+ H ++ + I K++KG +N + S+ ++ F R + Sbjct: 299 CCTQNGIRGGSATVHFPIWHQEIEDIIVLKNNKGTEDNRVRKLDYSIQISKLFYERFISN 358 Query: 1872509 DQPWQLVHRAEPSPAQRAADDVRQREDGLWVYSERP---------AREIWDRIMRSTYDV 1872661 + P D R D L+V ER A+E++ +++ + Sbjct: 359 GEISLFSPHDVPGLYDAFGTD---RFDELYVGYERDTSVPRKTIGAQELFLDLLK---ER 412 Query: 1872662 AEPGIVFISRMNEDNNLRAV-ETIRATNPCGEQPLPAYGCCNLGPLNLTRFVIDPFAQIK 1872838 AE G V++ ++ N+ + + + +N C E LP DP QI Sbjct: 413 AETGRVYVMNIDHCNSHSSFKDKVNMSNLCQEITLPT----------------DPLHQID 456 Query: 1872839 GRKPSF-------------DWDGLAKRTRTQVRFLDNVLDVTLWPLPQQYEESRAKRRIG 1872979 G + D L + VR L+ ++D +P+ ++ +R +G Sbjct: 457 GNGEIALCILSAINAGKLKNLDELEELCDLAVRGLEELIDYQNYPVKAAEVSTKNRRSLG 516 Query: 1872980 VGFTGLGDTLVMLGLRYNSQEGRDFAVGIAQLMRDEAYRASVELARERGAFPLFDAARY- 1873156 +G+ GL L G++Y+ + + + + ++S E+A+E+GA FD +Y Sbjct: 517 IGYIGLAHYLAKQGVKYDDPQAWQLVHELTESFQFYLLKSSNEIAKEKGACGYFDRTKYS 576 Query: 1873157 ---LETGTFASRLP-----------EDIKQAIRRDGIRNSHLLSIAPTGTVSLAFADNAS 1873294 L T+ S + E ++ IR G+R+S L + P+ + S+ N + Sbjct: 577 DGILPIDTYKSDVDEIVPNKLNHDWETLRSEIRTFGLRHSTLSAQMPSESSSV--VSNET 634 Query: 1873295 NGIEP 1873309 NGIEP Sbjct: 635 NGIEP 639 >ref|NP_543076.1|putative DNA methylase Length = 352 Score = 75.1 bits (183), Expect = 3e-11 Identities = 36/95 (37%), Positives = 55/95 (57%) Frame = -1 Query: 3187214 QLLNRDFLSDVANIPDGSIDLILCDPPYGLGKDYGNDSDMRTGDDFLSWTRGWLELAIPK 3187035 +L+N D L + +P+ S+DLI+ DPPY K G D+ + DD+L W L Sbjct: 11 ELINADCLEFIQTLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWLDQCLAQFWRV 70 Query: 3187034 LKPSGSLYIFCTWQYAPEIFSFLKTKLTMINEIIW 3186930 LKP+GSLY+FC + A +I ++ + ++N IIW Sbjct: 71 LKPAGSLYLFCGHRLASDIEIMMRERFNVLNHIIW 105 >ref|NP_536388.1|hypothetical protein Length = 213 Score = 74.7 bits (182), Expect = 4e-11 Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 7/112 (6%) Frame = +1 Query: 2459032 MRLPPFEPPTLAELRAWWRTRDEQAIQRLILEIQRQRLTLLELRNLIDCGVQQARAADRT 2459211 M LPPF PP L E+ WW +QRLILE+Q QRLTL ELR+ I ++ARA D + Sbjct: 1 MILPPFNPPKLPEMTEWWTRCTYADVQRLILEVQHQRLTLWELRSCIADASRRARAIDPS 60 Query: 2459212 LVERGEPLMTLRIRIAQEVLRVGDIDDTRQMS-------RAQQERLAVRTES 2459346 L+E G PL L + +E+ R R+ RA++E + R ES Sbjct: 61 LLEYGAPLRRLGYIVEKEIDRAAPFARMREPVAPFSDEWRAREELKSKRWES 112 >ref|NP_945062.1|gp31 Length = 213 Score = 74.7 bits (182), Expect = 4e-11 Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 7/112 (6%) Frame = +1 Query: 2459032 MRLPPFEPPTLAELRAWWRTRDEQAIQRLILEIQRQRLTLLELRNLIDCGVQQARAADRT 2459211 M LPPF PP L E+ WW +QRLILE+Q QRLTL ELR+ I ++ARA D + Sbjct: 1 MILPPFNPPKLPEMTEWWTRCTYADVQRLILEVQHQRLTLWELRSCIADASRRARAIDPS 60 Query: 2459212 LVERGEPLMTLRIRIAQEVLRVGDIDDTRQMS-------RAQQERLAVRTES 2459346 L+E G PL L + +E+ R R+ RA++E + R ES Sbjct: 61 LLEYGAPLRRLGYIVEKEIDRAAPFARMREPVAPFSDEWRAREELKSKRWES 112 >ref|NP_891805.1|aerobic NDP reductase large subunit Length = 747 Score = 74.3 bits (181), Expect = 5e-11 Identities = 111/523 (21%), Positives = 202/523 (38%), Gaps = 46/523 (8%) Frame = +2 Query: 1872119 NCFVQPVGDAIQGVDEEGLPGIYVALLQAAETMRRGGGVGYNFSAIRPKGARVHTTSSSA 1872298 +C V D++QG++E I + + + G+G N IR +G+++ Sbjct: 220 SCVVIESDDSLQGINETANAII--------KYISKRAGIGINAGMIRAEGSKIGHGEVRH 271 Query: 1872299 SGPCSYMDVFDASCRTVESAGSRRGAQMAVLDCNHPDLLEFIEAKHSKG----------- 1872445 +G + F + ++ G R GA H + I K++KG Sbjct: 272 TGVIPFWKHFQTAVKSCSQGGIRGGAATLYYPMWHLEFESLIVLKNNKGVEDNRIRHLDY 331 Query: 1872446 --RWNNFNVSVGVTDEFMRAVEEDQP----WQLVHRAEPSPAQRAADDVRQREDGLWVYS 1872607 + NN V + +++ D W L R E Q + +D + Sbjct: 332 GVQINNLMVERFLKRDYITLFSPDVAGGLLWDLYFRDEEGFRQLYE---KLEKDPSVRKT 388 Query: 1872608 ERPAREIWDRIMRSTYDVAEPGIVFISRMNEDNN-LRAVETIRATNPCGEQPLPA----- 1872769 A +++ + ++ F MN +R V I+ +N C E LP Sbjct: 389 RVKAEDLFLAVAIERFNTGRIYPTFTDNMNNHGAFIRNVAPIKQSNLCCEIALPTKPMGR 448 Query: 1872770 ----YGCCNLGPLNLTRFVIDPFAQIKGRKPSFDWDGLAKRTRTQVRFLDNVLDVTLWPL 1872937 C L L F I+ +++ + VR LDN+LD +P+ Sbjct: 449 DDSEISLCTLAAYVLGNFDIENMEEVE------------RIAMVMVRALDNLLDYQDYPV 496 Query: 1872938 PQQYEESRAKRRIGVGFTGLGDTLVMLGLRYNSQEGRDFAVGIAQLMRDEAYRASVELAR 1873117 Q ++ +R +GVG T L Y ++ +F + ++ +ASV+LA+ Sbjct: 497 EQALT-AKKRRSLGVGVTNFASYLADNFFTY--EDANEFTHKTFERLQYALIKASVQLAK 553 Query: 1873118 ERGAFPLFDAARY----LETGTFASRLP-----------EDIKQAIRRDGIRNSHLLSIA 1873252 E+GA L RY L + + E++++ +++ GIRNS L ++ Sbjct: 554 EKGACELMHETRYGRGELPIDWYKKTVDELVDPVYEMDWEELRKDLKKYGIRNSTLSALM 613 Query: 1873253 PTGTVSLAFADNASNGIEPAFSWTYTRMKVMADGSRESFDVEDYAYRLYRELGGDVNR-- 1873426 P + S N++NGIEP R V GS+E + ++ +V Sbjct: 614 PCESSSQ--VSNSTNGIEP------PRGIVSVKGSKEG---------QFNQVIPNVENNA 656 Query: 1873427 -LPDYFVSALEMSARDHLDMMAAVQPYVDTSISKTVNV-PADY 1873549 + D + ++ + +L + A +Q +VD +IS + P+ Y Sbjct: 657 DVIDLLWTLIKKGNKPYLTLAAIMQKFVDQAISSNTSYDPSTY 699 >ref|NP_848283.1|DNA polymerase Length = 704 Score = 73.9 bits (180), Expect = 6e-11 Identities = 91/358 (25%), Positives = 145/358 (40%), Gaps = 29/358 (8%) Frame = -2 Query: 3130546 KKTPSGAPSTDEEVLQKLAEDFPLPK----ILLEHRGLSKL--KSTYTDKLPRMVNATTG 3130385 K T GAP D+EVL+ + D P + ++ E+ + K +S DK A G Sbjct: 355 KYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDG 414 Query: 3130384 RVHTNYAQAVAVTGRLASNDPNLQNIP-VRTGEGRRIREAFIAP------AGHKLVSA-- 3130232 ++H + AVTGR PNL IP VR+ G + R AF A G V A Sbjct: 415 KIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDEITGKPWVQAGI 474 Query: 3130231 DYSQIELRIMAHISGDESLLHSFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGL 3130052 D S +ELR +AH + F GE H +I + + R AK +G Sbjct: 475 DASGLELRCLAH------FMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGF 528 Query: 3130051 IYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDETR----VSAKAKGYVETVFG 3129884 +YG + +G ++ K ++ P +A + + S++ + V Sbjct: 529 LYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKW 588 Query: 3129883 RRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEESKI------GT 3129722 +R W+ ++G R + +A+N +Q A + KL +I ++ + E + Sbjct: 589 KRRWIKGLDGRKVHVR--SPHSALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDF 646 Query: 3129721 RMIMQVHDELILEVPDAELSD-VRKRLPELMCGVAD---LKVPLVAEVGAGLNWEEAH 3129560 + VHDE+ + E++ V E M V D + L E G NW H Sbjct: 647 AYMAWVHDEIQVGCRTEEIAQVVIDTAQEAMRWVGDHWNFRCLLDTEGKMGPNWAVCH 704 >ref|YP_195210.1|virion structural protein Length = 1177 Score = 73.6 bits (179), Expect = 8e-11 Identities = 202/964 (20%), Positives = 342/964 (35%), Gaps = 150/964 (15%) Frame = +2 Query: 158348 LTGTHIGVGGYAISANGDVTSTGSI--QSGNTLSINAGGNINVANTQSNGDTTLVAGANA 158521 + G ++ + G I+ +GDV G +G+ + G++ + QS D +N Sbjct: 20 IAGDNLDLTGNGIALDGDVGLEGQSLHSNGSVVEWRFAGDVFLTGIQSVSDKIF---SNC 76 Query: 158522 TTGDTQSGGALSVTAQGKDGTGDITLNGTSVITGATTLVAAQDTNINGQTSSGTLQATAQ 158701 T++ ALS IT+NGTS+ G + A +T + GT Sbjct: 77 NISGTEN--ALSNIGNDSLENSSITINGTSIPLGGSVTTADTNTTYSFAAVDGTTDVRKT 134 Query: 158702 -RNVNVNAAVQTSGDLALSA-TNGNLTTSAN---VNSAGNLALNSXXXXXXXXXXXXXXX 158866 R + + T D+ L A TN +LT + N ++S+ Sbjct: 135 IRLTSGGSGTSTDQDVTLVAGTNVSLTRAGNDIQISSSFTDTDTITTLRSAVGGNATSGD 194 Query: 158867 VTLTAGQGASVTGSLASGMTLTASTPGAFSVTGSLLVGTNATIGSGSLDVPGVLIVQNNG 159046 +++ AG G++ G+T+T + ++T L GT +G LI + Sbjct: 195 ISI-AGSGSTTVSQSVDGLTITIDSTDTDTIT-RLRGGTGENFLAGDF----TLIAGDEV 248 Query: 159047 TVTAQG-DITGSG-----SMAFGQNGTLTSGQDVNVTGKLLANGLQVSAANSVTLNGVQA 159208 T++ G DIT + + G G+ SG DV TG Q +++T++ + Sbjct: 249 TLSQTGRDITINSVDTITRLKGGATGSFKSG-DVTFTGSGATTVSQSQDGSTITIDSIDT 307 Query: 159209 GGAFTVTAN--GASGNGDVTFNGNXXXXXXXXXXXXXXXXXNGTLAGGAQVALTGQGNVT 159382 + + G +GDVTF G +G V + G T Sbjct: 308 NTITRIRGSNGGTLTSGDVTFLG----------------------SGVTTVEQSPDGR-T 344 Query: 159383 VAAAGTVQSV-------GNALLTANTGSVNSTGTVNSAGTLVAQAAQNVSLTGATSVTGD 159541 + + T Q G L+ + S+ + +N T+V + N LT + Sbjct: 345 ITISSTDQDTTYDAALSGGLFLSGTSFSLKNNENINDQ-TIVKWDSSNFQLTNSIITDDG 403 Query: 159542 TTLTAGSD-VTTGGTFAGQGNGTITAGQDV------NLGGTNGFTKDVTVTAGNNV---- 159688 +T+T G D + TG T + A ++ NL G+NG + T G + Sbjct: 404 STVTIGGDLLVTGTTTTINTQNLVVADNNIELRRGENLTGSNGGIQLNRTTDGTGLVTSF 463 Query: 159689 -----------------NVPGALQGN-------NVTLNAG--NSATLGNVQANSALXXXX 159790 +VP L + N TL++ N +LG A S Sbjct: 464 NAMQWFESGGYWRTWDGSVPHRLVTDDEIQTLTNKTLDSPTLNFPSLGAATATSINGLSF 523 Query: 159791 XXXXXXXXXXXXXXXXXSVTSQTGSTLNAGGSVSVAAT--GTLG-TSATMSVXXXXXXXX 159961 S T +T +++V + GT+ TS T++V Sbjct: 524 GSTVSASLSVGNSKAISFNNSVTFNTAQNDSTITVQLSNGGTVAYTSNTLAVFASTTSNQ 583 Query: 159962 XXXIVS----------NGNMNLANTAGSLTSSGTIESGTDLNIN---AAQSIDLGXXXXX 160102 ++S N N + A++ + +S+ ++ + NIN AA +I +G Sbjct: 584 LRGVISDSTGVGKAVFNQNPSFADSITTSSSTFSVFNTGVTNINAFGAATTITMG----- 638 Query: 160103 XXXXXXXXXXQNITMNGSIVSQGNGTLNAGGTIGG-VGALAFGNAATLTSGRDTDLTGSL 160279 ++G+ + + ++ TIG G + N AT + D L GS Sbjct: 639 -------------AISGTTTIRNSLQVDGSATIGNESGDIITVNGATNFNNEDLTLRGS- 684 Query: 160280 RGATIQTGAGGSGTFADVQAG--------------------STIALTASNDVNL------ 160381 I+ G GG+ + + G S + T SN+ + Sbjct: 685 SDNPIKIGRGGNAIATNTRVGYRALESNTTGANNTAFGYESSFVLNTGSNNTSFGYQALR 744 Query: 160382 -----TGTLAGGSTVALTAGQDVNVSG----TLQSSSDTNLTAL---YGSVGVTGSVN-- 160519 G +A GS ++ + V G TL S +DTN Y +TGS N Sbjct: 745 SSGIGEGNVAFGSQSCISVTEGVGNVGVGTLTLSSVTDTNYNVCIGHYAGAALTGSGNVL 804 Query: 160520 --------------------SNGALNVLAGTDINLGG--------TTTVALDTTLQSARD 160615 N L + +GT + + G V + LQ + D Sbjct: 805 IGPASTEDSLSATYAPPAPTGNNQLVIASGTGVWIRGDNGFNVVMPNNVTIQKNLQISGD 864 Query: 160616 VNVTGSLSGQGNGFVT---AGRNIGGAGSLAFAQSAVLNA---AGAISQGGLIQGQNVQV 160777 + V G+ + + VT +G ++ F +A LN+ + + GLI G VQV Sbjct: 865 LTVNGTTTTVNSRVVTIDDKAIELGAVATINFVGNATLNSNVISNLPTTAGLIVGMEVQV 924 Query: 160778 SAVG 160789 VG Sbjct: 925 LNVG 928 Score = 58.9 bits (141), Expect = 2e-06 Identities = 119/504 (23%), Positives = 182/504 (36%), Gaps = 46/504 (9%) Frame = +2 Query: 158351 TGTHIGVGGYAISANGDVTSTGSIQSGNTLSINAGGNINVANTQSN-----GDTTLVAGA 158515 +G I V G N D+T GS S N + I GGN NT+ +TT GA Sbjct: 662 SGDIITVNGATNFNNEDLTLRGS--SDNPIKIGRGGNAIATNTRVGYRALESNTT---GA 716 Query: 158516 NATTGDTQSGGALSV----TAQGKDGTGDITLNGTSVITGATTLVAAQDTNINGQTSSGT 158683 N T +S L+ T+ G + +V G+ + ++ T G GT Sbjct: 717 NNTAFGYESSFVLNTGSNNTSFGYQALRSSGIGEGNVAFGSQSCISV--TEGVGNVGVGT 774 Query: 158684 LQATAQRNVNVNAAVQTSGDLALSATNGNLTTSANVNSAGNLALNSXXXXXXXXXXXXXX 158863 L ++ + N N + G A +A LT S NV +S Sbjct: 775 LTLSSVTDTNYNVCI---GHYAGAA----LTGSGNVLIGPASTEDSLSATYAPPAPTGNN 827 Query: 158864 XVTLTAGQGASVTGSLASGMTLTASTPGAFSVTGSLLVGTNATIGSGSLDVPGVLIVQNN 159043 + + +G G + G + + P ++ +L + SG L V G N+ Sbjct: 828 QLVIASGTGVWIRGDNGFNVVM----PNNVTIQKNLQI-------SGDLTVNGTTTTVNS 876 Query: 159044 GTVTAQGDITGSGSMA---FGQNGTLTSGQDVNV-TGKLLANGLQVSAAN---------- 159181 VT G++A F N TL S N+ T L G++V N Sbjct: 877 RVVTIDDKAIELGAVATINFVGNATLNSNVISNLPTTAGLIVGMEVQVLNVGITLPPGTI 936 Query: 159182 -------SVTLNGVQAGGAFTVTANGASGNGDVTFNG----------NXXXXXXXXXXXX 159310 + LNG G T A G D T NG Sbjct: 937 ITSIGTDQIVLNGNIGGSGGTNVTFTAIGPSDTTANGGGIIVRGSTNKTILYDNDGILPF 996 Query: 159311 XXXXXNGTLAGGAQVALTGQGNVTVAAAGTVQSVGNALLTA--NTGSVNSTGTVNSAGTL 159484 N + G ++ ++ G+ SV N+ LT+ S++ TG VN G + Sbjct: 997 WKISDNVDIPSGKVFSINESSVLSATTLGS--SVVNSSLTSVGTLQSLSVTGNVNLKGRI 1054 Query: 159485 VAQAAQNVSLTGATSVTGDTTLTAGSDVTTGGTFAGQGNGTITAGQDVNLGGTNGFTKDV 159664 + N +T T V+ + ++A + T GT A I NLG TNG + + Sbjct: 1055 TEKVVNNF-VTSITPVSNELEVSAANGNTIIGTLAA---SAINTWNFTNLGLTNGSSITL 1110 Query: 159665 T-VTAGNNVNVPG---ALQGNNVT 159724 T + GN + G ++GN++T Sbjct: 1111 TLIVDGNATAIYGDACKVEGNSIT 1134 Score = 55.1 bits (131), Expect = 3e-05 Identities = 82/353 (23%), Positives = 136/353 (38%), Gaps = 4/353 (1%) Frame = +3 Query: 152310 IVNQVTSSNPSLIEGQ-ISVTGSRANVILANPNGITVNGGSFVNTGHVA--LTTGQVSFD 152480 IVN+ + LI G + +TG+ +A + + G S + G V G V Sbjct: 8 IVNETSRRIEELIAGDNLDLTGNG----IALDGDVGLEGQSLHSNGSVVEWRFAGDVFLT 63 Query: 152481 DLQ-IAPGIFQRNVVLNTTGGAIVIGPQGLSSALVDLDLIAKTIQINGPVANTFTSATAI 152657 +Q ++ IF + T IG L ++ + ++ +I + G V T+ T Sbjct: 64 GIQSVSDKIFSNCNISGTENALSNIGNDSLENSSITIN--GTSIPLGGSVTTADTNTTYS 121 Query: 152658 TRAVAGTSAVTLNTGLSPSDNANDWLTLQTGQPLATANSFALDITAAGSVTSGRVEIIVT 152837 AV GT+ V L+ + T Q + + +T AG+ T Sbjct: 122 FAAVDGTTDVRKTIRLTSGGSGTS-----TDQDVTLVAGTNVSLTRAGNDIQISSSFTDT 176 Query: 152838 DKGPGVRSAGPLDASLGDFTLSSNGSVQISNTTVTANGNINFQVQDGISLTDTRVTSGTA 153017 D +RSA +A+ GD +++ +GS +S + + + + T TR+ GT Sbjct: 177 DTITTLRSAVGGNATSGDISIAGSGSTTVSQSV----DGLTITIDSTDTDTITRLRGGTG 232 Query: 153018 TLDASGAITLTGSSILTNGGATLSANGITLTPDSAQTGSTLASATAGVVLDSTADITNLG 153197 +G TL + TLS G +T +S T + L G + D+T G Sbjct: 233 ENFLAGDFTL-----IAGDEVTLSQTGRDITINSVDTITRLKGGATGSF--KSGDVTFTG 285 Query: 153198 SLIQGQAATSGDAQSLGAVTLDASGNILNQSLPGTPLGILFGVKGDVVVSAGG 153356 S A T +Q +T+D+ + G+ G L GDV G Sbjct: 286 S----GATTVSQSQDGSTITIDSIDTNTITRIRGSNGGTL--TSGDVTFLGSG 332 Score = 52.4 bits (124), Expect = 2e-04 Identities = 124/557 (22%), Positives = 201/557 (36%), Gaps = 83/557 (14%) Frame = +2 Query: 158339 NVSLTGTHIGVGGYAISANGDVTSTGSIQSGNTLS-INAGGNINVAN----TQSNGDTTL 158503 N LT + I G ++ GD+ TG+ + NT + + A NI + T SNG L Sbjct: 391 NFQLTNSIITDDGSTVTIGGDLLVTGTTTTINTQNLVVADNNIELRRGENLTGSNGGIQL 450 Query: 158504 VAGANATTGDT------------QSGGALSVTAQGKDGTGDITLNGTSVITGAT------ 158629 N TT T +SGG T G +T + +T T Sbjct: 451 ----NRTTDGTGLVTSFNAMQWFESGGYWR-TWDGSVPHRLVTDDEIQTLTNKTLDSPTL 505 Query: 158630 ---TLVAAQDTNINGQTSSGTLQATAQRNVNVNAAVQTSGDLALSATNGNLTTSANVNSA 158800 +L AA T+ING + T+ A+ +V + A+ + + + + T + +++ Sbjct: 506 NFPSLGAATATSINGLSFGSTVSASL--SVGNSKAISFNNSVTFNTAQNDSTITVQLSNG 563 Query: 158801 GNLAL--NSXXXXXXXXXXXXXXXVTLTAGQGASVTG---SLASGMTLTAST-------- 158941 G +A N+ ++ + G G +V S A +T ++ST Sbjct: 564 GTVAYTSNTLAVFASTTSNQLRGVISDSTGVGKAVFNQNPSFADSITTSSSTFSVFNTGV 623 Query: 158942 -----------------PGAFSVTGSLLVGTNATIGSGSLDVPGVLIVQN--NGTVTAQG 159064 G ++ SL V +ATIG+ S D+ V N N +T +G Sbjct: 624 TNINAFGAATTITMGAISGTTTIRNSLQVDGSATIGNESGDIITVNGATNFNNEDLTLRG 683 Query: 159065 DITGSGSMAFGQNGTLTSGQ------DVNVTGKLLANGLQVSAANSVTLNGVQAGGAFTV 159226 + G N T+ + + N TG AN +S LN +F Sbjct: 684 SSDNPIKIGRGGNAIATNTRVGYRALESNTTG---ANNTAFGYESSFVLNTGSNNTSFGY 740 Query: 159227 TANGASGNGD------------VTFNGNXXXXXXXXXXXXXXXXXNGTLAGGAQVALTGQ 159370 A +SG G+ VT N + A ALTG Sbjct: 741 QALRSSGIGEGNVAFGSQSCISVTEGVGNVGVGTLTLSSVTDTNYNVCIGHYAGAALTGS 800 Query: 159371 GNVTVAAAGTVQSVGNALLTANTGSVNSTGTVNSAGTLVAQAAQNVSLTGATSVTGDTTL 159550 GNV + A T S+ +A + N+ + S + + ++ +VT L Sbjct: 801 GNVLIGPASTEDSL-SATYAPPAPTGNNQLVIASGTGVWIRGDNGFNVVMPNNVTIQKNL 859 Query: 159551 TAGSDVTTGGTFAGQGNGTITA-GQDVNLG--GTNGFTKDVTVTAGNNVNVP---GALQG 159712 D+T GT + +T + + LG T F + T+ + N+P G + G Sbjct: 860 QISGDLTVNGTTTTVNSRVVTIDDKAIELGAVATINFVGNATLNSNVISNLPTTAGLIVG 919 Query: 159713 NNV-TLNAGNSATLGNV 159760 V LN G + G + Sbjct: 920 MEVQVLNVGITLPPGTI 936 Score = 48.9 bits (115), Expect = 0.002 Identities = 138/624 (22%), Positives = 232/624 (37%), Gaps = 63/624 (10%) Frame = -1 Query: 2493629 STTGTRISVAGTGGNRVIGGLTAGAVGAASSEAIN-GAQLYANXXXXXXXXXXGSTVNAD 2493453 +TT + +V GT R LT+G G ++ + + A + S+ Sbjct: 117 NTTYSFAAVDGTTDVRKTIRLTSGGSGTSTDQDVTLVAGTNVSLTRAGNDIQISSSFTDT 176 Query: 2493452 GSLKRPAYSIGGS-TYSDVGSALAAAVTTSVQAGANSVQYDSAAHDIITLGNGAAPVRLT 2493276 ++ ++GG+ T D+ A + + T S ++ DS D IT RL Sbjct: 177 DTITTLRSAVGGNATSGDISIAGSGSTTVSQSVDGLTITIDSTDTDTIT--------RLR 228 Query: 2493275 NVRAANLAADSTDAVNGQQ--LFATNQAVAQN------------TGSITNLDQRVTDNTT 2493138 N A + G + L T + + N TGS + D VT + Sbjct: 229 GGTGENFLAGDFTLIAGDEVTLSQTGRDITINSVDTITRLKGGATGSFKSGD--VTFTGS 286 Query: 2493137 NISSLDQRVTDNTTNISHLDQRTTT----------IEGDVTNITNQITNGEIGLVQQDQA 2492988 +++ Q +T I +D T T GDVT + + +T V+Q Sbjct: 287 GATTVSQSQDGSTITIDSIDTNTITRIRGSNGGTLTSGDVTFLGSGVTT-----VEQSPD 341 Query: 2492987 SRNLTVAKGTDGARVDFTGTGGARELTGIAAGTTDASAVN---LAQFKPMVAALGGGAQI 2492817 R +T++ D +GG L+G + + +N + ++ L I Sbjct: 342 GRTITISSTDQDTTYDAALSGGLF-LSGTSFSLKNNENINDQTIVKWDSSNFQLTNSI-I 399 Query: 2492816 NADGSLT--GPSYHMQGGTQTTVGDALGSLDNGLSTLQ-QNM--ENGGIGMV-TQDPVSR 2492655 DGS G + G T T L DN + + +N+ NGGI + T D Sbjct: 400 TDDGSTVTIGGDLLVTGTTTTINTQNLVVADNNIELRRGENLTGSNGGIQLNRTTDGTGL 459 Query: 2492654 VISVGAT----TNGNLINMAGTAGNRVVTGVAPGAVSSTSSDA--VNGSQLHAQAASTAV 2492493 V S A + G G+ +R+VT +++ + D+ +N L A A++ Sbjct: 460 VTSFNAMQWFESGGYWRTWDGSVPHRLVTDDEIQTLTNKTLDSPTLNFPSLGAATATSIN 519 Query: 2492492 ALGGGATVNAD---GSMTAPSYSXXXXXXXXXGSAITNLD----GRVTRNSSDIAGLQTT 2492334 L G+TV+A G+ A S++ + + G V S+ +A +T Sbjct: 520 GLSFGSTVSASLSVGNSKAISFNNSVTFNTAQNDSTITVQLSNGGTVAYTSNTLAVFAST 579 Query: 2492333 IGN-LNGAVANAV-------QYDGSAHDRITLGGTAANAPKVQLTNLKDANLSATST-DA 2492181 N L G ++++ + S D IT + + +TN+ + T T A Sbjct: 580 TSNQLRGVISDSTGVGKAVFNQNPSFADSITTSSSTFSVFNTGVTNINAFGAATTITMGA 639 Query: 2492180 VTGAQLWNTNQDVSTLNQLVQTVRNN-QTTGTPYVSVNSSG-----NAAQAIGNGSVAIG 2492019 ++G T+RN+ Q G+ + N SG N A N + + Sbjct: 640 ISGTT----------------TIRNSLQVDGSATIG-NESGDIITVNGATNFNNEDLTLR 682 Query: 2492018 GGAKASAPNSVAIGEGSVADVTNT 2491947 G S+ N + IG G A TNT Sbjct: 683 G----SSDNPIKIGRGGNAIATNT 702 Score = 43.5 bits (101), Expect = 0.094 Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 3/174 (1%) Frame = +2 Query: 157466 NITAPNAAGISLNQYQSFNIDPVGL-ILNNSLMSGTSLTGGNVQANPNLSGRTASVIVNQ 157642 N+ P+ S+N+ + +G ++N+SL S +L +V N NL GR +VN Sbjct: 1002 NVDIPSGKVFSINESSVLSATTLGSSVVNSSLTSVGTLQSLSVTGNVNLKGRITEKVVNN 1061 Query: 157643 VTSTGTAYASLLNGPLEVFGAPATVIIVNPNGIATQGTGFTNTIGVTLSTGTPQFLTGVG 157822 ++ T ++ LEV A II A FTN +G+T + L V Sbjct: 1062 FVTSITP----VSNELEVSAANGNTIIGTLAASAINTWNFTN-LGLTNGSSITLTLI-VD 1115 Query: 157823 GTPTSF--DSAQAIGYNVTGGHIQIEGNAGVNGPGSGIEGTVGTIDLIAETIGV 157