BLASTX 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig22 (1,395,092 letters) Database: Phage.aa 14,420 sequences; 3,019,461 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_047360.1|ORF348; homologous to eryA gene product in L07626 338 8e-91 ref|NP_945090.1|gp59 332 3e-89 ref|NP_599056.1|bactoprenol glucosyltransferase 295 8e-78 ref|NP_720276.1|GtrB 291 7e-77 ref|YP_006358.1|GtrB 291 1e-76 ref|NP_059582.1|O-antigen conversion protein 291 1e-76 ref|NP_958575.1|putative protein 221 9e-56 ref|NP_818228.1|gp169 141 1e-31 ref|NP_817998.1|gp25 135 6e-30 ref|NP_817477.1|gp27 133 3e-29 ref|YP_164695.1|transposase 133 4e-29 ref|NP_945089.1|gp58 132 7e-29 ref|YP_195202.1|hypothetical protein 125 8e-27 ref|NP_818340.1|gp39 117 2e-24 ref|NP_817358.1|gp20 117 2e-24 ref|NP_817913.1|gp62 112 1e-22 ref|NP_075297.1|gp30 106 4e-21 ref|NP_958576.1|putative protein 100 2e-19 ref|NP_039614.1|gene IV product 92 1e-16 ref|NP_046572.1|ABC transporter 92 1e-16 ref|NP_835645.1|putative transposase 92 1e-16 ref|YP_195262.1|hypothetical protein 91 2e-16 ref|NP_758949.1|ORF58 91 3e-16 ref|NP_071814.1|unknown 89 9e-16 ref|NP_040579.1|G IV protein 89 1e-15 ref|NP_438138.1|hypothetical protein 88 1e-15 ref|NP_795574.1|hypothetical protein 88 1e-15 ref|NP_818300.1|gp250 88 1e-15 ref|YP_195155.1|hypothetical protein 87 3e-15 ref|NP_861745.1|RB69ORF055c hypothetical protein 84 2e-14 ref|NP_071813.1|unknown 82 8e-14 ref|NP_046960.1|unknown 81 2e-13 ref|NP_047359.1|maturation protein 80 3e-13 ref|NP_510894.1|phage assembly protein 78 2e-12 ref|NP_817650.1|gp61 77 5e-12 ref|NP_818239.1|gp188 75 1e-11 ref|NP_046877.1|putative non-heme haloperoxidase 74 3e-11 ref|NP_040655.1|unknown protein 73 5e-11 ref|NP_818403.1|gp105 70 6e-10 ref|NP_047372.1|putative maturation protein 68 2e-09 ref|YP_195210.1|virion structural protein 66 8e-09 ref|NP_061653.1|transposase 58 2e-06 ref|NP_795697.1|putative tail protein 57 5e-06 ref|YP_006601.1|Gp21 57 5e-06 ref|NP_040730.1|pre-neck appendage protein 57 5e-06 ref|NP_795486.1|hypothetical protein 56 6e-06 ref|NP_665964.1|putative plasmid partitioning protein Soj 55 2e-05 ref|YP_024984.1|adenylosuccinate synthetase 55 2e-05 ref|YP_052989.1|Hypothetical protein 55 2e-05 ref|NP_536385.1|conserved hypothetical protein 51 3e-04 ref|NP_945059.1|gp28 51 3e-04 ref|NP_695118.1|putative tail protein 50 6e-04 ref|YP_195201.1|hypothetical protein 49 0.001 ref|NP_958678.1|Bbp9 48 0.002 ref|NP_996571.1|hypothetical protein predicted by GeneMark 48 0.002 ref|NP_996619.1|hypothetical protein predicted by GeneMark 48 0.002 ref|YP_024938.1|gp18 47 0.005 ref|NP_463477.1|putative tape-measure protein 47 0.005 ref|NP_690646.1|pre-neck appendage protein 46 0.007 ref|NP_064745.1|gp7 45 0.019 ref|NP_958192.1|gene 16 protein 44 0.025 ref|NP_944360.1|gp51 44 0.032 ref|YP_024939.1|gp19 44 0.042 ref|YP_164732.1|orf97 43 0.055 ref|NP_803663.1|ORF097 43 0.072 ref|NP_690787.1|immunity repressor 43 0.072 ref|NP_996715.1|putative tape measure protein 43 0.072 ref|NP_944342.1|gp33 42 0.094 ref|NP_047971.2|gp26 42 0.094 ref|NP_511031.1|helicase 42 0.12 ref|NP_112719.1|ORF56 42 0.12 ref|NP_835609.1|hypothetical protein 42 0.12 ref|NP_112034.1|integrase 42 0.12 ref|NP_958267.1|hypothetical protein 42 0.16 ref|YP_024725.1|gp52 41 0.21 ref|NP_695070.1|putative tape-measure protein 41 0.21 ref|NP_818167.1|gp94 41 0.27 ref|YP_195258.1|hypothetical protein 41 0.27 ref|NP_996720.1|putative neck passage structure 41 0.27 ref|NP_818345.1|gp44 40 0.36 ref|NP_705672.2|gp49 40 0.36 ref|NP_958155.2|gp48 40 0.36 ref|NP_892070.1|tail fiber protein 40 0.36 ref|NP_542529.1|hypothetical conserved protein COG330 40 0.47 ref|NP_835695.1|hypothetical protein 40 0.47 >ref|NP_047360.1|ORF348; homologous to eryA gene product in L07626 Length = 348 Score = 338 bits (866), Expect = 8e-91 Identities = 171/341 (50%), Positives = 232/341 (68%), Gaps = 4/341 (1%) Frame = +3 Query: 328743 WRNGGETPWLKDAPVHPLQHALKDMERAYKNXXXXXXXXXXXXXXGQ---RDSFRYPDPT 328913 W+ E +L+DA LQ LKD+ A+K + RDS R+ + Sbjct: 2 WKKMPEYIFLQDAYTDNLQQKLKDLHTAWKRCFDKKLAAKAPVWKRKNEGRDSIRFVNFE 61 Query: 328914 QFKLDQPNGRIFLPK-LGWMRLRLSRPVLGELRNATVSFNAGKWCVSIQTEREVEQPVPH 329090 ++ + N R+ LP LGW++ R S+ V G+++NAT+S AG+W +S Q E E +P Sbjct: 62 KYCCLE-NRRVKLPSGLGWVKFRQSQRVNGKIKNATISQLAGQWYISFQVEIETAEPNHT 120 Query: 329091 ATSVIGIDVGIARFATMSDGTFIAPLNSFRKHEARLRRCQRAMSRKVKFSNSWKKAKARV 329270 +T+++G+D G+A+ AT+SDGT P+NSF+K++ +L R QR +SRKVKFSN+W+K K ++ Sbjct: 121 STTIVGLDAGVAKLATLSDGTVFEPVNSFQKNQKKLARLQRQLSRKVKFSNNWQKQKRKI 180 Query: 329271 QRIHARIGNARRDYLHKATTTISKNHAMACIEDLQVRNMSRSAAGSIDAPGKNVRAKSGL 329450 Q +H+RI N RRDYLHK TTT+SKNHAM IEDL+V NMS+SAAG++ PG+NVRAKSGL Sbjct: 181 QCLHSRIANIRRDYLHKVTTTVSKNHAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGL 240 Query: 329451 NKAILDQGWCEFRRQLEYKLAWNGGWLVAVPPANTSRTCPACGYVSADNRTTQEKFACVE 329630 N++ILDQGW E RRQLEYK W GG ++AVPPA TS+ C CG+ + +NR +Q +F C Sbjct: 241 NRSILDQGWYEMRRQLEYKQLWRGGQVLAVPPAYTSQRCACCGHTAKENRLSQSQFRCQV 300 Query: 329631 CSYEENADVVGALNILARGHRVAACGEPVKSSRSMKQEPAA 329753 C Y NADV GA NILA GH V ACG ++S R +KQEP A Sbjct: 301 CGYTANADVNGARNILAAGHAVLACGGTMQSDRPLKQEPDA 341 >ref|NP_945090.1|gp59 Length = 429 Score = 332 bits (852), Expect = 3e-89 Identities = 173/426 (40%), Positives = 256/426 (60%), Gaps = 7/426 (1%) Frame = -3 Query: 1019484 MTRNTHAATPAPH----NPWREICAASIGNALEFYDLLIYGYFAIVIGQLFFPTHDAATS 1019317 M +T+A AP R + A +GN E++D + Y +F+++I +LFFP+ D S Sbjct: 1 MQTSTYAREAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLS 60 Query: 1019316 LLLSVGTFGISFVTRPLGSIVLGSYADRAGRKASLTMSIGLMMLGTAMIAFAPTYAQIGI 1019137 LLLSV T G+ F RP+G IV+G AD+ GR+A+LT++I LM GTAMI FAPTY G+ Sbjct: 61 LLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGL 120 Query: 1019136 ASPLLIIVARMLQGFSTGGEFGAATAFMVEQADAKRRGFFASWQMSTQXXXXXXXXXXXX 1018957 +PL+I+VAR+LQGFS GGE G ATA++ E+ A+R G++ SW ++ Sbjct: 121 GAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAV 180 Query: 1018956 XXXXXXTTDQLHAWGWRVAFSVGLLIGPVGLYIRRNIDE---PADFRRLGEKGRAKSPLR 1018786 Q+ +WGWR+ F +GL +GPVG+YIR +++ PAD RLGE +P+ Sbjct: 181 FIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFPAD-ERLGE----CAPVV 235 Query: 1018785 DVFARDRANLLLGAGVVATATAFNYVHKLYMPTYAVKQLHIPATSSYLGAVVTGAMLMVA 1018606 +V L+G G+V T +YV Y+PTYA K L +P+++ ++ +V ++++ Sbjct: 236 EVVRSFSREALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFV 295 Query: 1018605 APVVGHLSDRFGRIRVMLIALILVGVTTWPLFVMLNRYPTVETLLAVQALVGXXXXXXXX 1018426 P++GHLSD FGR + AL++ V +PLF MLN P ++TLL Q + G Sbjct: 296 TPLIGHLSDLFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEG 355 Query: 1018425 XXXXXXADIFPTSTRGTGLALSYNFSVTLFGGFAPLIVTWLIDATHNKLAPSFYVMATAV 1018246 +D+FP TG+++SYN +V FGGF+ I+TW I THN LAP+FYV+A A+ Sbjct: 356 PILAALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAI 415 Query: 1018245 LGITSV 1018228 + + SV Sbjct: 416 VSLISV 421 Score = 247 bits (630), Expect = 2e-63 Identities = 147/439 (33%), Positives = 222/439 (50%), Gaps = 5/439 (1%) Frame = -2 Query: 1187683 METSPMQDAATPLVDAPPAPRRRSAQTRTIIATSAGNALEMFDFTVFSYFAALIGKTFFP 1187504 M+TS A P + R +IA GN E FDF +S+F+ +I K FFP Sbjct: 1 MQTSTYAREAAPSASS-------DTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFP 53 Query: 1187503 VDSGAGPLLLAMATFGVGFVMRPLGGVLIGNYADRAGRRAALTLTIQLMIAGTALIALTP 1187324 LLL+++T GVGF MRP+GG++IG AD+ GRRAALT+TI LM AGTA+I P Sbjct: 54 STDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAP 113 Query: 1187323 SYAHIGVVAPVLVVIGRLLQGLSAGGEIGASTTFLMESGPLSGRGFMVSWQMISQXXXXX 1187144 +Y G+ AP+++V+ RLLQG SAGGE+G +T +L E P G+ SW S Sbjct: 114 TYKDAGLGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAII 173 Query: 1187143 XXXXXXXXXXXXXXXXXLESWGWRXXXXXXXXXXXXXFYIRRHLDETHVPTHDADG--SA 1186970 +ESWGWR YIR L++ P + G + Sbjct: 174 LASVLAVFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFPADERLGECAP 233 Query: 1186969 VREVFTRYLGRVVLGTLMIIGGTSTLYIFVFYMPAYAVRTLHLPMATSLLAG-CASGLAM 1186793 V EV + ++G +++ T Y+ +FY+P YA + L LP +T +A + + + Sbjct: 234 VVEVVRSFSREALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVL 293 Query: 1186792 IVAALVSGLWIIDRLPRRKPMIAVTWLLSLACVYPAFRLLIAAPSVGLMVAIVTVVMAFA 1186613 V L+ L L R+ +A L+++ YP F +L AAP + ++ V Sbjct: 294 FVTPLIGHL---SDLFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVI 350 Query: 1186612 TAGSSAFLLLIMEAFPPRVRATALATIYSFGVTIFGGFAQFNVTWLLHRTGDPMSPAWYV 1186433 + L + + FP V +T ++ Y+ V FGGF+ +TW + T + ++PA+YV Sbjct: 351 ASYEGPILAALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYV 410 Query: 1186432 LACGAVSMI--ALWRFRER 1186382 +A VS+I +LW+ R + Sbjct: 411 IAAAIVSLISVSLWQPRRK 429 Score = 222 bits (566), Expect = 5e-56 Identities = 124/410 (30%), Positives = 207/410 (50%), Gaps = 1/410 (0%) Frame = +3 Query: 799629 KRAVGAMAFGNAMEWFDFGVYSYIAVTLGKVFFPSSSPSXXXXXXXXXXXXXXXVRPLGG 799808 +RAV A+ GN EWFDF YS+ +V + K+FFPS+ + +RP+GG Sbjct: 20 RRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGG 79 Query: 799809 MVFGPLGDRIGRQRVLAATMIMMAVGTFAIGLIPSYASIGIMAPVLLLVARLVQGFSTGG 799988 +V G + D++GR+ L T+ +M GT IG P+Y G+ AP++++VARL+QGFS GG Sbjct: 80 IVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGG 139 Query: 799989 EYGGAATFIAEFSTDRRRGFMGSFLEFGTLIGYXXXXXXXXXXXXXXSQEALLSWGWRVP 800168 E GGA ++ E R G+ S+++ ++ + SWGWR+P Sbjct: 140 EMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIP 199 Query: 800169 FFIAGPLGLVGLYVRLKLEETPAFKKXXXXXXXXXXXXPKQRFAALLVEQWRPLLQCVGL 800348 F + LG VG+Y+R +L + P F + F+ R L GL Sbjct: 200 FLLGLGLGPVGIYIRSRLND-PGFPADERLGECAPVVEVVRSFS-------REALVGFGL 251 Query: 800349 VLIFNVTDYMALSYLPSYLSATLHFRESHGLFXXXXXXXXXXPMTLYAGHLSDKVGRKPV 800528 V+ + V Y+ L Y+P+Y S L S G +T GHLSD GR+ Sbjct: 252 VVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWF 311 Query: 800529 MMAGCVGLLVLAVPAL-MLIRTGGMLPVFGGMLIYGVLLSTFTGVMPSALPALFPTRIRY 800705 + + +V A P ML G+ + +++G++++++ G + +AL +FP + Sbjct: 312 LAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLS 371 Query: 800706 GALAIGFNVSVSLFGGTTPLVTAWLVDRTGDLMMPAYYLMGASFIGIVSV 800855 ++I +N++V FGG + + W + T + + PA+Y++ A+ + ++SV Sbjct: 372 TGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLISV 421 Score = 177 bits (450), Expect = 1e-42 Identities = 115/403 (28%), Positives = 183/403 (45%), Gaps = 3/403 (0%) Frame = +2 Query: 486794 KIIFAGSVGNVVEWFDWSVYTAFAIYFSKQFFPADNEXXXXXXXXXXXXXGFGMRPLGGW 486973 + + A VGN EWFD+ Y+ F++ +K FFP+ ++ GF MRP+GG Sbjct: 21 RAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGI 80 Query: 486974 VIGAFSDRFGRRNALTLTVMMMAGSSLLISILPTYASIGWLAPALMTVLRMIQGLSVGGE 487153 VIG +D+ GRR ALT+T+ +M + +I PTY G AP ++ V R++QG S GGE Sbjct: 81 VIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGE 140 Query: 487154 YGAATTFLTESAPPHRRGFYGXXXXXXXXXXXXXXXXXXXXMTHWMPRAELEAWGWRVPF 487333 G AT +L E P R G+Y + + ++E+WGWR+PF Sbjct: 141 MGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPF 200 Query: 487334 FIGGCGSLIGFWMRRNVGETEAFENLRRKGEIEARSLRWTWTHHRDALLRLVGISVLGAF 487513 +G +G ++R + + F R GE A + + R+AL+ G+ V Sbjct: 201 LLGLGLGPVGIYIRSRLND-PGFPADERLGEC-APVVEVVRSFSREALVGF-GLVVFWTV 257 Query: 487514 SFYLFISFMPVYAIRHAGAHPEDXXXXXXXXXXXXMLAQPLFGALSDRLGRRPQLIVFXX 487693 Y+ + ++P YA + + PL G LSD GRR L Sbjct: 258 CSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGALL 317 Query: 487694 XXXXXXXPV--VTSIGPDFRSMLLVECFGLLTYGLYSSIAPAVMAELFSTEVRGIGIGTA 487867 P+ + + P +++L+ + L Y A ++++F V GI + Sbjct: 318 VAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISIS 377 Query: 487868 YNIVVALLGGTTPYLMTW-LQSQHREGWFLGYVCVGAAISLIT 487993 YN+ V GG + ++TW + + H YV A +SLI+ Sbjct: 378 YNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLIS 420 Score = 164 bits (416), Expect = 1e-38 Identities = 120/393 (30%), Positives = 181/393 (46%), Gaps = 4/393 (1%) Frame = +1 Query: 447790 RRAVIASTIGTTIEWYDFFLYSTVTGLVFAKLYFPQSHPLVGTLQAFLIYAVGFVARPVG 447969 RRAVIA +G EW+DF YS + ++ AKL+FP + + L + VGF RP+G Sbjct: 20 RRAVIAVIVGNGFEWFDFISYSFFS-VIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIG 78 Query: 447970 AAIFGHYGDRIGRKATLIVTLLLMGLATFAVAFVPTYATIGIWGAVILTVLRFIQXXXXX 448149 + G D++GR+A L VT+ LM T + F PTY G+ +++ V R +Q Sbjct: 79 GIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAG 138 Query: 448150 XXXXXXXLMSMEWARTNAHRGFVASWPQFGVPAGLFLAN-LAVLAMSWFSGSAFLTWGWR 448326 E H G+ SW Q + + LA+ LAV + +WGWR Sbjct: 139 GEMGGATAYLRERVPAERH-GYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWR 197 Query: 448327 VPFFLSIVLVAIGLYIRLNILETPIFAKLLAERRIEKTPMLEVLRKQPRDIVLSAFARMA 448506 +PF L + L +G+YIR + L P F ER E P++EV+R R+ ++ + Sbjct: 198 IPFLLGLGLGPVGIYIR-SRLNDPGFP--ADERLGECAPVVEVVRSFSREALVGFGLVVF 254 Query: 448507 EQAPFYIYTAFVFTYGITALGVTREXXXXXXXXXXXXEFFTIPLFGHVSDLIGRRRMYMI 448686 Y+ ++ TY L + F PL GH+SDL G RR ++ Sbjct: 255 WTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFG-RRWFLA 313 Query: 448687 GAAAVG-VFGFVYFAMVDSRN--PVWIFAAIVLSLVPHSMMYGPQAALIAESFTGRLRYS 448857 GA V V + FAM+++ + +V LV S GP A +++ F + + Sbjct: 314 GALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIAS-YEGPILAALSDMFPDGVLST 372 Query: 448858 GASMGYQLASVIAGGPAPLIATALFAYYHSGYA 448956 G S+ Y LA + GG + I T A H+ A Sbjct: 373 GISISYNLAVITFGGFSAAIITWAIATTHNNLA 405 >ref|NP_599056.1|bactoprenol glucosyltransferase Length = 307 Score = 295 bits (754), Expect = 8e-78 Identities = 156/305 (51%), Positives = 200/305 (65%) Frame = +2 Query: 581744 ISLVVPFYNEGEAVEHFFDVVIPLMTSIDAIRFEIVCVNDGSRDDTLERLIRISTGERRV 581923 ISLVVP +NE EA+ F+ V + EIV +NDGS+D T + ++ + V Sbjct: 3 ISLVVPVFNEEEAIPVFYKTVREFQ-ELKPYEVEIVFINDGSKDATESIINALAVSDPLV 61 Query: 581924 RVIDLTRNFGKEAALTAGLDEALGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAKRS 582103 + TRNFGKE AL AGLD A GDAVIP+D DLQDP +IP +IE W+ GA++V AKRS Sbjct: 62 VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRS 121 Query: 582104 NRACDSFAKRTAAAIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFMKGLF 582283 +R+ D KR A +Y++HN +S K+ ENVGDFRLM R+VV ++ LPER+ FMKG+ Sbjct: 122 DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL 181 Query: 582284 AWVGYRTVIVEYQRDARSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIAALAF 582463 +WVG +T +VEY R R AG SKF+GWKLWN ALEGITSFST PLR WTYIG+ +A+++F Sbjct: 182 SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF 241 Query: 582464 LYGAFIIFRTLLFGNPVLGYASLISVTLFXXXXXXXXXXXXXXXXXXXXDESKQRPVYLI 582643 LYGA++I TL+FGNPV GY SL+ LF ESK RP Y+I Sbjct: 242 LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYIESKHRPKYII 301 Query: 582644 RRRYQ 582658 + Q Sbjct: 302 KNEKQ 306 >ref|NP_720276.1|GtrB Length = 325 Score = 291 bits (746), Expect = 7e-77 Identities = 152/307 (49%), Positives = 200/307 (65%) Frame = +2 Query: 581732 YTPLISLVVPFYNEGEAVEHFFDVVIPLMTSIDAIRFEIVCVNDGSRDDTLERLIRISTG 581911 Y ISLVVP +NE + + F+ V + EIV +NDGS+D T + +I+ Sbjct: 14 YKMKISLVVPVFNEEDTIPIFYKTVREF-NELKEYEIEIVFINDGSKDATESIINKIAAS 72 Query: 581912 ERRVRVIDLTRNFGKEAALTAGLDEALGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVA 582091 + V + TRNFGKE AL AGLD A GDAVIP+D DLQDP +IP +IE W+ GA++V Sbjct: 73 DPLVIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVL 132 Query: 582092 AKRSNRACDSFAKRTAAAIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFM 582271 AKRS+R+ D KR A +Y++HN +S+ K+ ENVGDFRLM R VV ++ +PER+ FM Sbjct: 133 AKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFM 192 Query: 582272 KGLFAWVGYRTVIVEYQRDARSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIA 582451 KG+ +WVG +T +V+Y R R AG SKF+GWKLWN ALEGITSFST PLR WTYIG+ IA Sbjct: 193 KGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIA 252 Query: 582452 ALAFLYGAFIIFRTLLFGNPVLGYASLISVTLFXXXXXXXXXXXXXXXXXXXXDESKQRP 582631 ++FLYGA++I L+FGN V GY SL+ LF E+KQRP Sbjct: 253 GMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQRP 312 Query: 582632 VYLIRRR 582652 Y+++R+ Sbjct: 313 KYILKRK 319 >ref|YP_006358.1|GtrB Length = 310 Score = 291 bits (744), Expect = 1e-76 Identities = 151/303 (49%), Positives = 199/303 (65%) Frame = +2 Query: 581744 ISLVVPFYNEGEAVEHFFDVVIPLMTSIDAIRFEIVCVNDGSRDDTLERLIRISTGERRV 581923 ISLVVP +NE + + F+ V + EIV +NDGS+D T + +I+ + V Sbjct: 3 ISLVVPVFNEEDTIPIFYKTVREF-NELKEYEIEIVFINDGSKDATESIINKIAASDPLV 61 Query: 581924 RVIDLTRNFGKEAALTAGLDEALGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAKRS 582103 + TRNFGKE AL AGLD A GDAVIP+D DLQDP +IP +IE W+ GA++V AKRS Sbjct: 62 IPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRS 121 Query: 582104 NRACDSFAKRTAAAIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFMKGLF 582283 +R+ D KR A +Y++HN +S+ K+ ENVGDFRLM R VV ++ +PER+ FMKG+ Sbjct: 122 DRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGVL 181 Query: 582284 AWVGYRTVIVEYQRDARSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIAALAF 582463 +WVG +T +V+Y R R AG SKF+GWKLWN ALEGITSFST PLR WTYIG+ IA ++F Sbjct: 182 SWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSF 241 Query: 582464 LYGAFIIFRTLLFGNPVLGYASLISVTLFXXXXXXXXXXXXXXXXXXXXDESKQRPVYLI 582643 LYGA++I L+FGN V GY SL+ LF E+KQRP Y++ Sbjct: 242 LYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQRPKYIL 301 Query: 582644 RRR 582652 +R+ Sbjct: 302 KRK 304 >ref|NP_059582.1|O-antigen conversion protein Length = 310 Score = 291 bits (744), Expect = 1e-76 Identities = 151/303 (49%), Positives = 199/303 (65%) Frame = +2 Query: 581744 ISLVVPFYNEGEAVEHFFDVVIPLMTSIDAIRFEIVCVNDGSRDDTLERLIRISTGERRV 581923 ISLVVP +NE + + F+ V + EIV +NDGS+D T + +I+ + V Sbjct: 3 ISLVVPVFNEEDTIPIFYKTVREF-NELKEYEIEIVFINDGSKDATESIINKIAASDPLV 61 Query: 581924 RVIDLTRNFGKEAALTAGLDEALGDAVIPLDADLQDPPSLIPVMIEHWRDGAEVVAAKRS 582103 + TRNFGKE AL AGLD A GDAVIP+D DLQDP +IP +IE W+ GA++V AKRS Sbjct: 62 IPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRS 121 Query: 582104 NRACDSFAKRTAAAIYYRVHNLLSDVKLPENVGDFRLMDRKVVNALRNLPERHRFMKGLF 582283 +R+ D KR A +Y++HN +S+ K+ ENVGDFRLM R VV ++ +PER+ FMKG+ Sbjct: 122 DRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGVL 181 Query: 582284 AWVGYRTVIVEYQRDARSAGHSKFSGWKLWNFALEGITSFSTVPLRSWTYIGVGIAALAF 582463 +WVG +T +V+Y R R AG SKF+GWKLWN ALEGITSFST PLR WTYIG+ IA ++F Sbjct: 182 SWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSF 241 Query: 582464 LYGAFIIFRTLLFGNPVLGYASLISVTLFXXXXXXXXXXXXXXXXXXXXDESKQRPVYLI 582643 LYGA++I L+FGN V GY SL+ LF E+KQRP Y++ Sbjct: 242 LYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQRPKYIL 301 Query: 582644 RRR 582652 +R+ Sbjct: 302 KRK 304 >ref|NP_958575.1|putative protein Length = 351 Score = 221 bits (564), Expect = 9e-56 Identities = 126/337 (37%), Positives = 187/337 (55%), Gaps = 6/337 (1%) Frame = +2 Query: 1275005 KFKNISLGDPFFDSLKSDYDEFGEWFLKK--SEHQAYTFRNKAGLLDGFLYLKQEDGPVL 1275178 KFK+++L DPFFDSL+ DY+ F +WF +K S+ AY G+L FLYLKQE Sbjct: 11 KFKDLNLEDPFFDSLRDDYEGFNDWFERKALSDSDAYVLFKSDGMLQAFLYLKQERDEDT 70 Query: 1275179 DSTPPLPGARRLKIGTFKINPHGTRLGERFIKRAFDVAVHARVDAIYVTIFAKHKALVDL 1275358 +P LP +LK+GTFK+ H T LG+RF+ + D YVT + K L L Sbjct: 71 TISPSLPQCNKLKVGTFKVEAHKTSLGQRFMNIIVQALIRYHFDLTYVTFYPKQVQLKTL 130 Query: 1275359 FFRYGFLQKAIKQTANGQELVLERRLDLVFKDVVL-DYPRI-PIGTGRHFVLSLYPQWHS 1275532 F +YGF + +K N +E+ + DL K+ D+PRI F+L +YP++H+ Sbjct: 131 FKKYGFEKWGMK---NNEEVYYK---DLKVKNSTFKDFPRINEKRLVNKFLLGIYPKYHT 184 Query: 1275533 RLLPDSLLRTESSSILQDISHTNSIHKIYLAAMSGVEQLRRGDTLLIYRTAE--GGSAYY 1275706 L PDS L E + +DIS +NSI K YL M + + D + IYRT + SA+Y Sbjct: 185 ELFPDSKLCNEKDFVRKDISFSNSIIKCYLGGMEEMSNFKPNDLIAIYRTKDNWANSAFY 244 Query: 1275707 TSVVTSLCVVEELTNVKNFATVEQFLAYCAPYSIFSELELRNFYKSRRYPWVIRFTYNLA 1275886 SV+TS+C V + N+ +F F Y +IFSE EL+ FY+++RYP++++ YN Sbjct: 245 NSVITSVCTVIDTRNINDFTDFSSFKRYVGKETIFSEQELKRFYETKRYPYIVKMLYNFP 304 Query: 1275887 LSRRPNRKALVEQVGMNPGMYWGFFQISTLQLKHILQ 1275997 L++R L ++ + YWG +++ Q IL+ Sbjct: 305 LNKRITNGELRTKLNIVLD-YWGCAELNNNQFNAILK 340 >ref|NP_818228.1|gp169 Length = 358 Score = 141 bits (355), Expect = 1e-31 Identities = 96/322 (29%), Positives = 152/322 (47%), Gaps = 6/322 (1%) Frame = +2 Query: 550103 LADTLTPGAVVYVQSPQGNWLESFGTAVRGTNTPIPTNAHFRVGSVTKTWTGTVILQLVQ 550282 +A T PG ++ + P G++ + G + P+ +A FR SVTKT T IL+ V Sbjct: 20 MAVTKQPGMMLKITGPAGDYELTRGLRTVAPDKPMSFDAKFRAASVTKTLTAMAILREVD 79 Query: 550283 EGRLSLGDSVSKFVANVPNGDTITIEQLLTMRSGLYNYSTNLAFNQTLDAQPDMVWTTSE 550462 +G++SL D V K+VA +PNG +T++Q+L MRSGL Y T++ T A P W T Sbjct: 80 KGKISLDDVVDKYVAQIPNGRQLTVKQVLMMRSGLAEYQTDIIIALTFLAFP--TWPTFS 137 Query: 550463 LLGIAEG---QPVYFPPGTDFRYSNTNTILLGLIIEQLTGMSA-ADAMNARLFAPLGLAN 550630 G + F PG + Y +N LL LI+E++ G + L PLG+ + Sbjct: 138 PEGAMQAVRRNKAVFKPGAQYMYCGSNYHLLALILEKVNGGKGWKRILMDDLVKPLGMTS 197 Query: 550631 TMLPPQQDTSLPAPAPQGYQWGTNAETTDSDALSPQRQADAKSGVLQPTNVTSVNTSWAW 550810 T P ++P P +GY G + +++ VN ++ Sbjct: 198 TSFP--DGATIPQPEVKGYTTGVFKKWSENG---------------------KVNANFHG 234 Query: 550811 TAGSGISTVTELAAYVQRMVGGGYLNADLQ--AQRLASCTPVDPTDPMSASYCLGLAKFG 550984 AG ++T+ ++ + M G +L + + L S P P + Y +GL FG Sbjct: 235 PAGGMVTTMGDMHKWATAMRDGVFLKPETRQLQHSLFSSVPWTDEGPTAFGYGMGLLSFG 294 Query: 550985 TFYGHTGEIPGFNTFMGYDPVT 551050 ++GH G IPG+ T Y+PV+ Sbjct: 295 KWFGHDGWIPGYGTVAMYEPVS 316 Score = 45.4 bits (106), Expect = 0.011 Identities = 69/340 (20%), Positives = 112/340 (32%), Gaps = 19/340 (5%) Frame = -2 Query: 935839 PGMAIGIVADGKPYVFDYGVMSTQTGKPVNGDTLFEIGSVSKTLTATLAADAQEGGELSL 935660 PGM + I Y G+ + KP++ D F SV+KTLTA + G++SL Sbjct: 26 PGMMLKITGPAGDYELTRGLRTVAPDKPMSFDAKFRAASVTKTLTAMAILREVDKGKISL 85 Query: 935659 ADPAGKYLPAV-QGKPFGVVTLLNLGTHTPGGMPLQVPDSI-------------RDDAGL 935522 D KY+ + G+ V +L + + G+ D I G Sbjct: 86 DDVVDKYVAQIPNGRQLTVKQVLMMRS----GLAEYQTDIIIALTFLAFPTWPTFSPEGA 141 Query: 935521 IRYLDAWRPAYAPGTYRTYSNVAIGMLGWLTAKAM-HKDFAVLMEQRLFPALGMTRTYI- 935348 ++ + + + PG Y +L + K K + ++ L LGMT T Sbjct: 142 MQAVRRNKAVFKPGAQYMYCGSNYHLLALILEKVNGGKGWKRILMDDLVKPLGMTSTSFP 201 Query: 935347 ---NVPEARQADYAQGYTQDGKPIRMTGGMLWQPAYGVRTTAADLLRFVQANMGLIETAP 935177 +P+ Y G + PA G+ TT D+ ++ A + P Sbjct: 202 DGATIPQPEVKGYTTGVFKKWSENGKVNANFHGPAGGMVTTMGDMHKWATAMRDGVFLKP 261 Query: 935176 RLQRALERTHTGYFRAGPLTQDLIWEQYPYPVALPTLIEGNSMKMLRNGVVATAIKPPLA 934997 ++ Q ++ P+ PT G M +L G Sbjct: 262 ETRQ---------------LQHSLFSSVPWTDEGPTAF-GYGMGLLSFG----------- 294 Query: 934996 PSADTWINKTGSTNGFSTYVAFVPAKRIAIVMLANRSYPN 934877 W G G+ T + P + N PN Sbjct: 295 ----KWFGHDGWIPGYGTVAMYEPVSGAVFTGVENMKTPN 330 >ref|NP_817998.1|gp25 Length = 941 Score = 135 bits (341), Expect = 6e-30 Identities = 100/369 (27%), Positives = 158/369 (42%), Gaps = 20/369 (5%) Frame = +2 Query: 550088 QIDAL----LADTLTPGAVVYVQSPQGNWLESFGTAVRGTNTPIPTNAHFRVGSVTKTWT 550255 QID + +AD PG +Y+ SP G +L+++G + G P+ + HFR+GS TK +T Sbjct: 79 QIDQIVAQGMADGAGPGVGLYITSPHGQYLQTYGISTAGV--PLTPDMHFRIGSATKPFT 136 Query: 550256 GTVILQLVQEGRLSLGDSVSKF------VANVPNGDTITIEQLLTMRSGLYNYSTNLAFN 550417 T +L +Q+G LSL D++ +F ++++ D I I L+ MRSG++N +L+F Sbjct: 137 ATAVLMAIQDGLLSLEDTIDQFDTPEFKLSDIDQADKIKIRHLMMMRSGVFNEQRDLSFM 196 Query: 550418 QTLDAQPDMVWTTSELLGIAEGQPVYFPPGTDFRYSNTNTILLGLIIEQLTGMSAADAMN 550597 P + S I PGT F Y N N ++ L++ + G D + Sbjct: 197 LNFALMPKSELSDSAWFRILTSHKSVREPGTGFEYVNANWFIISLVLRAVRGRHIRDIIT 256 Query: 550598 ARLFAPLGLANTMLPPQQDTSLPAPAPQGYQWGTNAETTDSDALSPQRQADAKSGVLQPT 550777 + PLGL T P +PAP G+ TT++ P Sbjct: 257 EDIITPLGLTETSWP--ATAKMPAPYAVGHDGLLGGITTETHPTYPH------------- 301 Query: 550778 NVTSVNTSWAWTAGSGISTVTELAAYVQRMVGGGYLNADLQAQRLASCTPV---DPTDPM 550948 AGS +ST+T+L +V M L ++ R + P+ P P Sbjct: 302 -----------CAGSLVSTLTDLHKWVGHMRDATLLTPEMAELRDSMFCPIPSGSPYAPP 350 Query: 550949 SASYCLGLAKFGTFYGHTGEIPGFNTFMGYDPVTKTTIVTWSNTAAAPDGRAPAN----- 551113 Y L +G + GH G G+ Y + + IV + N+ +A Sbjct: 351 EYGYGLAWYDYGDWKGHAGSWVGYECSPMYHKESGSIIVCYENSQSAGKNGVGVQTFSQI 410 Query: 551114 --EIARIIM 551134 EIAR+I+ Sbjct: 411 FPEIARLIL 419 Score = 43.1 bits (100), Expect = 0.055 Identities = 48/207 (23%), Positives = 78/207 (37%), Gaps = 15/207 (7%) Frame = -2 Query: 935881 VTRYIAPLMKQYAIPGMAIGIVADGKPYVFDYGVMSTQTGKPVNGDTLFEIGSVSKTLTA 935702 + + +A M A PG+ + I + Y+ YG+ + G P+ D F IGS +K TA Sbjct: 80 IDQIVAQGMADGAGPGVGLYITSPHGQYLQTYGISTA--GVPLTPDMHFRIGSATKPFTA 137 Query: 935701 TLAADAQEGGELSLAD-------PAGKYLPAVQGKPFGVVTLLNLGTHTPGGMP------ 935561 T A + G LSL D P K Q + L+ + + Sbjct: 138 TAVLMAIQDGLLSLEDTIDQFDTPEFKLSDIDQADKIKIRHLMMMRSGVFNEQRDLSFML 197 Query: 935560 --LQVPDSIRDDAGLIRYLDAWRPAYAPGTYRTYSNVAIGMLGWLTAKAMHKDFAVLMEQ 935387 +P S D+ R L + + PGT Y N ++ + + ++ + Sbjct: 198 NFALMPKSELSDSAWFRILTSHKSVREPGTGFEYVNANWFIISLVLRAVRGRHIRDIITE 257 Query: 935386 RLFPALGMTRTYINVPEARQADYAQGY 935306 + LG+T T A YA G+ Sbjct: 258 DIITPLGLTETSWPATAKMPAPYAVGH 284 >ref|NP_817477.1|gp27 Length = 946 Score = 133 bits (335), Expect = 3e-29 Identities = 102/392 (26%), Positives = 169/392 (43%), Gaps = 24/392 (6%) Frame = +2 Query: 549977 GMVAVAPAVMIGLAVSACGGDSSPTS----NTPAFANAARPQ-------IDALLADTLT- 550120 G A P + V A G +S P +T F P ID ++A+ + Sbjct: 31 GRSAGTPYRIYTTNVDAAGWESEPGPVKEVSTKEFVPTEGPMPSDLTSVIDEIVAEGMAT 90 Query: 550121 ---PGAVVYVQSPQGNWLESFGTAVRGTNTPIPTNAHFRVGSVTKTWTGTVILQLVQEGR 550291 PG +YV SPQG +L+++G + G P+ + HFR+GS TK +T T +L +Q+G Sbjct: 91 GAGPGVGLYVTSPQGYYLKTYGISTTGV--PLTPDMHFRIGSATKPFTATAVLMAIQDGL 148 Query: 550292 LSLGDSVSKF------VANVPNGDTITIEQLLTMRSGLYNYSTNLAFNQTLDAQPDMVWT 550453 +SL D++ +F ++++ + I I L+ MRSG++N +L F P ++ Sbjct: 149 ISLEDTIDQFDTPEFKLSDIDRANEIKIRHLMMMRSGVFNEQRDLTFMLNFALFPKSGFS 208 Query: 550454 TSELLGIAEGQPVYFPPGTDFRYSNTNTILLGLIIEQLTGMSAADAMNARLFAPLGLANT 550633 + + + PGT+F Y N N L+ LI++ + G + + PLGL T Sbjct: 209 DQSWFNVLKSHKLVRDPGTEFEYVNGNWFLISLILKAVRGKHIRQILYDDIINPLGLTET 268 Query: 550634 MLPPQQDTSLPAPAPQGYQWGTNAETTDSDALSPQRQADAKSGVLQPTNVTSVNTSWAWT 550813 P ++PAP G+ TT++ + +W Sbjct: 269 SWP--ATAAMPAPYAVGHDGLLGGITTET------------------------HPTWPHC 302 Query: 550814 AGSGISTVTELAAYVQRMVGGGYLNADLQAQRLASCTPV---DPTDPMSASYCLGLAKFG 550984 AGS +ST+T+L + M L +++ R + P+ P P Y L +G Sbjct: 303 AGSIVSTLTDLHKWCGHMRDATLLTPEMEQLRDSMFCPIPSGSPFAPPEYGYGLAWYDYG 362 Query: 550985 TFYGHTGEIPGFNTFMGYDPVTKTTIVTWSNT 551080 + GH G G+ Y + T IV + N+ Sbjct: 363 DWKGHAGSWVGYECSPMYHKESGTIIVCYENS 394 Score = 45.1 bits (105), Expect = 0.015 Identities = 54/213 (25%), Positives = 76/213 (35%), Gaps = 4/213 (1%) Frame = +2 Query: 1258307 GGGASYDPSTGQMTGPTFSIAGGKQTNLSDAINALNQGWNVTTG-GNTSGASVTAVQPGS 1258483 GGG+ ++G G G + + + ++VT G G + GA V G Sbjct: 743 GGGSGRRSNSGYRYGGGGGGGGAYVNRIFVPVELMGSTYSVTRGSGGSGGAKVLTSGDG- 801 Query: 1258484 TVTFNGGKNIALAQNGADITIATSDTPTFTSVGIDNGGPTLSGSGLNMAGKKITNVATGD 1258663 GG N GA + + S T G +GG S SG G T V Sbjct: 802 ----RGGAN-----GGASVFSSGSVVITANGGGHGSGGTNSSSSGTRGLGGTATAVGITG 852 Query: 1258664 VSSSSKDAVNGSQLYQTNQTVSTLGNNAASVIGGGASYDPSTGQMTGPTFSIAGGKQTN- 1258840 V++S NG GN +S GG+ D + G GGK++N Sbjct: 853 VTASLLSGANG-------------GNGGSSPTSGGSKTDGAGAGGRG-----GGGKKSND 894 Query: 1258841 --LSDAINALNQGWNVTTGGNTSGASVTAVQPG 1258933 + N + G GG +SG S T G Sbjct: 895 KTFNGGNNGTSDGPAGNGGGGSSGGSGTGTDAG 927 Score = 42.7 bits (99), Expect = 0.072 Identities = 27/86 (31%), Positives = 42/86 (48%) Frame = -2 Query: 935896 DLHDTVTRYIAPLMKQYAIPGMAIGIVADGKPYVFDYGVMSTQTGKPVNGDTLFEIGSVS 935717 DL + +A M A PG+ + + + Y+ YG+ +T G P+ D F IGS + Sbjct: 75 DLTSVIDEIVAEGMATGAGPGVGLYVTSPQGYYLKTYGISTT--GVPLTPDMHFRIGSAT 132 Query: 935716 KTLTATLAADAQEGGELSLADPAGKY 935639 K TAT A + G +SL D ++ Sbjct: 133 KPFTATAVLMAIQDGLISLEDTIDQF 158 >ref|YP_164695.1|transposase Length = 387 Score = 133 bits (334), Expect = 4e-29 Identities = 106/400 (26%), Positives = 182/400 (45%), Gaps = 27/400 (6%) Frame = +3 Query: 328569 LQAFKFELMPNGEQQRDMRRFAGSCRFVYNKALALQKGNYE--AGGKFIGYVAMAKHLTE 328742 ++ K L P+ QQ + + G+ RFV+N+ LA+ K Y+ KF+ M L + Sbjct: 2 IKGVKIRLYPSKHQQNQLLQMFGNDRFVWNQMLAMAKARYKNNPSSKFVNEYGMNYLLKQ 61 Query: 328743 WRNGGETPWLKDAPVHPLQHALKDMERAYKNXXXXXXXXXXXXXXGQRDSFRYPDPTQFK 328922 + E +LK++ LQ + ++ +A+K Y + K Sbjct: 62 LKQ--EYSFLKESDSSSLQVSNHNLAQAFKTLFKHQGGYPRFKSRHSAKQ-SYTGKSTCK 118 Query: 328923 LDQPNGRIFLPKLGWMRLRLSRPVLG-ELRNATVSFN-AGKWCVSIQTEREVEQPVPHAT 329096 + R+ LPKLG +R + + G +++ T+ G++ +S+ E +P+ Sbjct: 119 IVAKR-RVKLPKLGSIRTSKTNILNGCKIKRYTLILEPTGRYYLSLTVEDNSIKPLEKTG 177 Query: 329097 SVIGIDVGIARFATMSDGTFIAPLNSFRKH--EARLRRCQRAMSRK-------------- 329228 +V+G+D+G+A A SDG SF+ + ++R Q S++ Sbjct: 178 AVVGVDLGVADLAITSDGK---KYESFKPTYLDKQVRSWQSKFSKRKYIATTEVRQWNHN 234 Query: 329229 -------VKFSNSWKKAKARVQRIHARIGNARRDYLHKATTTISKNHAMACIEDLQVRNM 329387 V+ ++W++AK A+I N R+DYLHK TT + + + + +EDL+ +N+ Sbjct: 235 HNDYKMLVEDYHNWQRAKRIKACYQAKIANKRKDYLHKITTELVEKYDVIAMEDLRTKNL 294 Query: 329388 SRSAAGSIDAPGKNVRAKSGLNKAILDQGWCEFRRQLEYKLAWNGGWLVAVPPANTSRTC 329567 ++ L K+I +Q W EFR LEYK W G L+ V P TS+ C Sbjct: 295 LKN---------------HHLAKSISNQSWREFRTILEYKCKWYGKQLIVVKPNYTSQIC 339 Query: 329568 PACGYVSADNRTTQEKFACVECSYEENADVVGALNILARG 329687 +CGY S ++ C +C + DV A+NIL +G Sbjct: 340 SSCGYHSGKKPLEIREWTCYKCGTHHDRDVNAAVNILNKG 379 >ref|NP_945089.1|gp58 Length = 297 Score = 132 bits (332), Expect = 7e-29 Identities = 89/306 (29%), Positives = 150/306 (49%), Gaps = 13/306 (4%) Frame = -2 Query: 1126606 RLKHLPPLSYLTAFEAAARHESFTSAAEELCVTQSAISRQIRLLEETLGCALFVRSHKAV 1126427 +++ LPPL L F+AAARH +FT AAEEL V Q A+S+Q+ LE LG LFVR KA+ Sbjct: 2 KIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKAL 61 Query: 1126426 SLTDGGRKFQRTVNXXXXXXXXXAYELRVQASTSTVTVSADLAIASHWLIPRLPKFRAEH 1126247 LT G+++ V+ + + + ++T++ A+ +L R+ +F AEH Sbjct: 62 HLTRAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEH 121 Query: 1126246 PEIIIHVDASDEDTRNIREGAD--LAIQFGDGYW-------PACNARFLLEEEIFPVCTP 1126094 PE+ + + +REG A +F G + P ++ E++ C P Sbjct: 122 PEVSVRI--------LVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAP 173 Query: 1126093 AYLA--RLAPMAHTRDLLRATLIHLETRHWDWMDWATWF--AHHDIALTEPRQDLYINNY 1125926 +LA R+ P +DL+ ATL+ E + WM W WF +I P + + N+Y Sbjct: 174 TFLAGRRVPP----QDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGF-RPARTISANSY 228 Query: 1125925 PAVLXXXXXXXXXXXGWRYLADDMLATGVLVRPIETSVRTGRGFYLLHPSDTLLSPEARI 1125746 P +L GW+++ ++ +G LV + G + ++ P+D +P + Sbjct: 229 PVLLQLALHGHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTM 288 Query: 1125745 FCDWIV 1125728 F +W++ Sbjct: 289 FREWLL 294 Score = 114 bits (284), Expect = 3e-23 Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 3/300 (1%) Frame = -1 Query: 803060 RLRSMPSLDFLRGFECAARHLSFTRAGQELNVTQSAVSRQVKALEEQLRIELFHRHIRSL 802881 +++ +P L L F+ AARH +FTRA +ELNV Q AVS+QV LE L LF R ++L Sbjct: 2 KIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKAL 61 Query: 802880 TLTDKGRELYDAISFALSDLESVIGKLSSSVGQRAISLSTTVSFAALWLIPRLGSFRASY 802701 LT G++ D + L+D + +++++ A L+L R+ F A + Sbjct: 62 HLTRAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEH 121 Query: 802700 PDIDVRVSATSEIEDLKRKRLHLAVRYAG--PYTSTDETDVLFRERVVAVCSPSLMSAAG 802527 P++ VR+ + +L + V Y P T ++ E V A C+P+ ++ Sbjct: 122 PEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIV-AEDVHAYCAPTFLA--- 177 Query: 802526 DAASMKPEXXXXXXXXXXXDPRGEW-PWHGWSHLLKELGVPRLRPAGALHFSQYDQLVQA 802350 + P+ + + +W W W L +G RPA + + Y L+Q Sbjct: 178 -GRRVPPQDLMEATLLVAEEQQRQWMGWRDWFRL--TVGEIGFRPARTISANSYPVLLQL 234 Query: 802349 AVDGHGIAIGRRPLVDGLLKQGRLVELFPHCTVASGSYVLVQNPDACNEFDIAVLTNWLL 802170 A+ GHG +G + ++ L++ G+LV G+Y ++ D + + + WLL Sbjct: 235 ALHGHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 107 bits (267), Expect = 2e-21 Identities = 86/291 (29%), Positives = 128/291 (43%), Gaps = 7/291 (2%) Frame = -2 Query: 1179757 LPPLNSLRAFEAAARLGSFTLAADELCVTHGAISRHVQQLEAWLGRPLFERHNRRVELTD 1179578 LPPL L F+AAAR G+FT AA+EL V GA+S+ V +LE +LG LF R + + LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 1179577 SGRAYLAEVGASFDRIALATAQHFGHAQQRVLRVSAPATFSLRWLVPKLSSFQVAHPAIE 1179398 +G+ Y V A ATA L ++ + + +L +++ F HP + Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 1179397 VRLSTSNEPIDKLRDKVDL---IVRGGPQAIDGYVAEEFLSEVRLPVCAPKLLEGRPLHT 1179227 VR+ + + D+ +R P G ++E CAP L GR + Sbjct: 126 VRILVREGVFNLNAAEFDIGVYYIRDVPP--PGIAGTAIVAEDVHAYCAPTFLAGRRV-P 182 Query: 1179226 PADLAGFTLLHAATYPGMWPEW----LAAAGQPNLVPRHSLTLEHFYLTLQGALDGLGVA 1179059 P DL TLL A W W G+ P +++ + + LQ AL G G Sbjct: 183 PQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAI 242 Query: 1179058 MGPIALVADDIAEGRLVQPFSEPALPPWRYFTYVASARANDEAVRAFKEWL 1178906 +G ++ + G+LV A Y + R + AV F+EWL Sbjct: 243 LGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 106 bits (265), Expect = 4e-21 Identities = 86/294 (29%), Positives = 139/294 (47%), Gaps = 6/294 (2%) Frame = +2 Query: 1137917 PSMSLLLVFEAAARHESYTRAAEELSLSQSAISRQVQTLEDQLGVPLFRREGRSVKLTEV 1138096 P + L+ F+AAARH ++TRAAEEL+++Q A+S+QV LE LG LF R+ +++ LT Sbjct: 7 PPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRA 66 Query: 1138097 GRRYFAELSGALGRIRGATLQAMSHQAGAGTLRLATLPTFGSKWLLPHLHDFYTAHPGVT 1138276 G++Y + L AT M Q +L +A + +L + +F HP V+ Sbjct: 67 GQQYADRVHAILADCVEATALVMKEQT-PHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 1138277 VHLHSRIGGVDFLNDDLDAAI-TVGAGDWPGLHAHRLYNEFLIAIAPPDTGSASRRKADA 1138453 V + R G + + D + + PG+ + E + A P T A RR Sbjct: 126 VRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAP-TFLAGRRV--- 181 Query: 1138454 RTPAWAAKQTLLGVTSNQQAWAEWFSHYRLDHRQMRIGPSFELTSH----LIQAVRAGMG 1138621 P + TLL Q+ W W +RL ++ P+ ++++ L+Q G G Sbjct: 182 -PPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHG 240 Query: 1138622 IGLVPKVLVEDELSRNELVSIGDAITS-QRSYYLVYPPGNETLPSLVAFREWLL 1138780 L K ++ + +LV DA S +Y +++P P++ FREWLL Sbjct: 241 AILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 100 bits (249), Expect = 3e-19 Identities = 81/296 (27%), Positives = 123/296 (41%), Gaps = 9/296 (3%) Frame = -3 Query: 12729 LPMKRLPSLNALQVFDIVARHGSFTRAAEHLCLTQGAVSRQILALESFYQFALFKRTPKX 12550 + ++ LP L L FD ARHG+FTRAAE L + QGAVS+Q++ LE+F LF R K Sbjct: 1 MKIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKA 60 Query: 12549 XXXXXXXXXXLPTVRESFARIEEVSMRLSRRRTELALKVPTC---MMQWMLPRIMRFQAE 12379 V A E + + + +T +L + ++ RI F AE Sbjct: 61 LHLTRAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAE 120 Query: 12378 HPELQVQITTTWDHQVDFRMEPFDAAVIYAAGA-GPDMHAIPLFEERLTPVCAPG-LPDR 12205 HPE+ V+I + + FD V Y P + + E + CAP L R Sbjct: 121 HPEVSVRILVR-EGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGR 179 Query: 12204 QPLASLDDLAGHTLLHPTRDHRDWKRWLD----HAGAPHVDSTRGLSFETLDLATHAAID 12037 + DL TLL R W W D G R +S + + A+ Sbjct: 180 R--VPPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALH 237 Query: 12036 GYGVAIGDRTLVDESVAAHRLVMPFDLSLPTGMGYFFVYPDGAEQQQKIQLFGGWI 11869 G+G +G + ++ V + +LV+ D G Y ++P + +F W+ Sbjct: 238 GHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 86.7 bits (213), Expect = 4e-15 Identities = 80/277 (28%), Positives = 120/277 (43%), Gaps = 7/277 (2%) Frame = -2 Query: 866335 LPSLMALRCFEAAARHENFSRAADELCLTHGAVSRAVRLLEDDLGVALFERRSRRVFLTD 866156 LP L L F+AAARH NF+RAA+EL + GAVS+ V LE LG LF R ++ + LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 866155 AGRKLAQAVHDGLGLMRHAAQELRTEAARARRWVLSCEPTLLMRWLIPRWPDFQARHTGV 865976 AG++ A VH L A + E ++C +L R +F A H V Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQT-PHSLTIACASGTATLFLADRIAEFSAEHPEV 124 Query: 865975 DIHLAAAGGPFSFDSG-IDMAIRRNDFAWPAGYHAERLFAEKVGPVCRPDKVDAWFSARR 865799 + + G F+ ++ D+ + P G + AE V C P + + RR Sbjct: 125 SVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAP----TFLAGRR 180 Query: 865798 --GDRLLKADVPQLHTRTRP-DAWKEW--AVAANQPAAGGRGQRFDHFYFSLQAAVAGLG 865634 L++A + + R W++W R + + LQ A+ G G Sbjct: 181 VPPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHG 240 Query: 865633 VAIGPWHLVRDDIESGVLV-APMGFVEDGSHYSLLTP 865526 +G H++ +ESG LV A G Y ++ P Sbjct: 241 AILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWP 277 Score = 82.0 bits (201), Expect = 1e-13 Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 13/304 (4%) Frame = +3 Query: 776184 PMLDLNDLALFVQVVRAGSFSEAARRLRMPANTLSRRIDQLEGQLGTRLLHRSTRKLAPS 776363 P+ L L F R G+F+ AA L + +S+++ +LE LGT L R + L + Sbjct: 5 PLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLT 64 Query: 776364 TEGQALFERYAPALDRIFEIERLHADGQEPSGTVRVTAMAGLFEIFRLEWLAEFYARYPQ 776543 GQ +R L E L Q P ++ + +G +F + +AEF A +P+ Sbjct: 65 RAGQQYADRVHAILADCVEATALVMKEQTPH-SLTIACASGTATLFLADRIAEFSAEHPE 123 Query: 776544 ISIDFLLDDTPSDLIGERIDLALRMGIETGGSFRVRRIAP----GTMILA------ASPA 776693 +S+ L+ + +L D+ G + +R + P GT I+A +P Sbjct: 124 VSVRILVREGVFNLNAAEFDI---------GVYYIRDVPPPGIAGTAIVAEDVHAYCAPT 174 Query: 776694 YLERRGAPRTPRELADHDCLTVSGRQGRAM-WRLQGPRGTQEISI--DSRFSVNDMRVVV 776864 +L R P P++L + L +Q + M WR EI S N V++ Sbjct: 175 FLAGRRVP--PQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLL 232 Query: 776865 QACIAGLGVALLPQLLAEPGIEQGKLVRVLPSYRRSSSDLGLQLVYTSRPPLAPAVTVFA 777044 Q + G G L + + P +E GKL VL S +S Q+++ + PAVT+F Sbjct: 233 QLALHGHGAILGWKHMITPLVESGKL--VLASDAHASFGGAYQVIWPADRRDTPAVTMFR 290 Query: 777045 DFLL 777056 ++LL Sbjct: 291 EWLL 294 Score = 81.6 bits (200), Expect = 1e-13 Identities = 76/284 (26%), Positives = 119/284 (41%), Gaps = 10/284 (3%) Frame = -2 Query: 259384 VKAKPLPPVYALRAFESAARTGSFTLAAEELSLTQSAVSKHVRTLEAYFGRKLFVRRGPK 259205 +K +PLPP+ L F++AAR G+FT AAEEL++ Q AVSK V LE + G LFVR Sbjct: 1 MKIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKA 60 Query: 259204 MTVTAEAHIFASGLRRGFRQIEEACVLFQSQR--DVLRLKAPSTLTMRWLLDALAAFRDT 259031 + +T +A + EA L ++ L + S +L D +A F Sbjct: 61 LHLTRAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAE 120 Query: 259030 RPAFEVQI--ASVWMDVDTVDFFSESYDCAILLGAGKFGEATQCVKLFDEWLIPVCSRAT 258857 P V+I +++ +F Y + G G A + E + C+ Sbjct: 121 HPEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTA-----IVAEDVHAYCAPTF 175 Query: 258856 ATVARTNP----AACELIHPSPDRR--DWRRWLKGSGHDLEVDITRGQVFDMLEQGIAAA 258695 R P A L+ R+ WR W + + ++ R + + A Sbjct: 176 LAGRRVPPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLA 235 Query: 258694 IAGHGLSIGDLALCATAIDEKQLVLPFKTAVNTGDAYYLIWPDD 258563 + GHG +G + ++ +LVL + G AY +IWP D Sbjct: 236 LHGHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPAD 279 Score = 71.6 bits (174), Expect = 1e-10 Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 2/180 (1%) Frame = -3 Query: 606063 IPSNSALQAFEXXXXXXXXXXXAEELARTEGAVSRQIGRLEAFLGVTLFERIGNRVRLAP 605884 +P L F+ AEEL +GAVS+Q+ +LE FLG TLF R + L Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 605883 NGARYAVQVREIL-DRLERDSLYLMGQPIEGASIDIAAIPTFATRWLIPRLKHFQDRHPN 605707 G +YA +V IL D +E +L + Q S+ IA AT +L R+ F HP Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPH--SLTIACASGTATLFLADRIAEFSAEHPE 123 Query: 605706 ITVHIAERMEPFLLAGSGFDAAIHF-EHPAWEGMHLHPLLEEVLVPICSPALLAGAGANP 605530 ++V I R F L + FD +++ G+ ++ E + C+P LAG P Sbjct: 124 VSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVPP 183 Score = 71.2 bits (173), Expect = 2e-10 Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 5/276 (1%) Frame = -3 Query: 1062948 LNDLRIFVATVDAGSFTAAADQLMLSKQFVSRRTMALEASLGVRLLHRNTRNLAVTESGH 1062769 L L F A G+FT AA++L +++ VS++ + LE LG L R+ + L +T +G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1062768 EFYARAQRILAEIADAEQAMSVRSTELHGSLKISAPLSFGITHVSPLIAEFLSAHPAVRL 1062589 ++ R ILA+ +A A+ ++ H SL I+ ++ IAEF + HP V + Sbjct: 69 QYADRVHAILADCVEAT-ALVMKEQTPH-SLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1062588 NLDLTDRRVDLIGEGFDL-VLRIGSLEDSTLIARALGAWRMVACASPAYLKRQGTPQTPA 1062412 + + + +L FD+ V I + + A+ A + A +P +L + P P Sbjct: 127 RILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP--PQ 184 Query: 1062411 DLAGHTCVLYGRERR--IGWE--FRVDGAARTFDVQGPLVANNGEVVRDXXXXXXXXXXL 1062244 DL T ++ ++R +GW FR+ F + AN+ V+ Sbjct: 185 DLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILG 244 Query: 1062243 PDFIVGAALDSGALVPVLDAYAPSPITLNAVFPQHR 1062136 ++ ++SG LV DA+A ++P R Sbjct: 245 WKHMITPLVESGKLVLASDAHASFGGAYQVIWPADR 280 Score = 67.8 bits (164), Expect = 2e-09 Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 3/257 (1%) Frame = -1 Query: 297542 MDPIADLEFFARLVTHGSLSALARDLGVTPPAVSARLNQIERRLGVKXXXXXXXXXXXXN 297363 + P+ L FF HG+ + A +L V AVS ++ ++E LG Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 297362 EGEVYLATGSKLLEQVHELERTVSSSRNQPQGLLKVNATFGFGRRHIVPALSAFRDRHPE 297183 G+ Y +L +E T + Q L + G + ++ F HPE Sbjct: 66 AGQQYADRVHAILADC--VEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPE 123 Query: 297182 VEIQLELTDRPMNLAELAYDVGIRF-GELPDQRVVGRKLAANRRFVCASPAYLKANGVPK 297006 V +++ + + NL +D+G+ + ++P + G + A +P +L VP Sbjct: 124 VSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP- 182 Query: 297005 VPGDLRGHRCIVLRENDTAYGTWH--FTKGKRHELVKVHGVMSSNDGEATLRWAIDGHGV 296832 P DL +V E + W F + +S+N L+ A+ GHG Sbjct: 183 -PQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGA 241 Query: 296831 LVRSEWDAQPFIDSGAL 296781 ++ + P ++SG L Sbjct: 242 ILGWKHMITPLVESGKL 258 Score = 66.2 bits (160), Expect = 6e-09 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 2/258 (0%) Frame = -3 Query: 640884 LPSLAWFAHVAHHRSFTKAAAEMGVSRANLSQNVKALERRLNVKLLYRTTRDMSLTEEGQ 640705 L L +F A H +FT+AA E+ V++ +S+ V LE L L R + + LT GQ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 640704 RLYDVWYPALV-AVERTVDALHEARDAPTGLIRMNTSRVAAKTLIEPHLEEFSTRFPGLG 640528 + D + L VE T AL P L S A L + + EFS P + Sbjct: 69 QYADRVHAILADCVEAT--ALVMKEQTPHSLTIACASGTATLFLAD-RIAEFSAEHPEVS 125 Query: 640527 LELVMDDGLANIVADGCDVGIRIGESLAPHMVAVPITPSLEMAVVGTPAYFKRHGEPATP 640348 + +++ +G+ N+ A D+G+ + P +A + ++ P + G P Sbjct: 126 VRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLA--GRRVPP 183 Query: 640347 ADLVRHNCLRFRQVSGAIHPW-EFASPDASGHGFTVEPLGSITTNDDDGMIRAALQGVGL 640171 DL+ L + W ++ GF P +I+ N +++ AL G G Sbjct: 184 QDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGF--RPARTISANSYPVLLQLALHGHGA 241 Query: 640170 IQHIDIAVQPHLDSGALV 640117 I + P ++SG LV Sbjct: 242 ILGWKHMITPLVESGKLV 259 Score = 64.7 bits (156), Expect = 2e-08 Identities = 41/144 (28%), Positives = 67/144 (46%) Frame = -2 Query: 1120210 PPLASLETVCTVAREGSFLAAADVSGVTHGAISRRVAAVENWLGLRLFERHARGVRLTPD 1120031 PPL L AR G+F AA+ V GA+S++V +E +LG LF R A+ + LT Sbjct: 7 PPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRA 66 Query: 1120030 GQRFVGRIEQAFAIIDSAADQWRSPRAPRLVRMSVVPAFAQLWLFERQHALESEAPALRI 1119851 GQ++ R+ A A + P + ++ A L+L +R +E P + + Sbjct: 67 GQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1119850 ELGIDLRNVDIAGGEADLSVRYGR 1119779 + + ++ E D+ V Y R Sbjct: 127 RILVREGVFNLNAAEFDIGVYYIR 150 Score = 64.3 bits (155), Expect = 2e-08 Identities = 70/285 (24%), Positives = 114/285 (40%), Gaps = 5/285 (1%) Frame = -2 Query: 671224 LKQLRAFVTVAETGNVTRASSLLNLVQPAVSRQLRLLEEDMGTELFDRSRHGMQLTPSGK 671045 L+ L F A GN TRA+ LN+ Q AVS+Q+ LE +GT LF R + LT +G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 671044 TMLEYARRILNEVARAKAEIQPTEGPVAGIVSIGLLASTSDLLATRLAGEVARRYPHIRL 670865 + IL + A A + + P + ++I + T+ L E + +P + + Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 670864 RLTIGYAGHLQDWLEAGDVDAALLY-GQKETPALHVKALIDESLWAVAAPSAGLSRKRPL 670688 R+ + L A + D + Y P + A++ E + A AP+ R+ + Sbjct: 127 RILVREGVFN---LNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRR--V 181 Query: 670687 PLERVAREPFILPSAPQ----GLRXXXXXXXXXAGVTLQVFAETNALSVQKELVAQGHGW 670520 P + + ++ Q G R G N+ V +L GHG Sbjct: 182 PPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGA 241 Query: 670519 TILPAVGVTQEVERGILTAAPLASPGVRRTIVLAAPSSRQATAPV 670385 + +T VE G L A A + P+ R+ T V Sbjct: 242 ILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAV 286 Score = 63.9 bits (154), Expect = 3e-08 Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 3/285 (1%) Frame = +1 Query: 724027 LPSLAWFVHIAHHLSFTRAAAEMGVSRAALSQNLKALEQQLNVKLLYRTTRDMSLTEDGQ 724206 L L +F A H +FTRAA E+ V++ A+S+ + LE L L R + + LT GQ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 724207 RLYDTLRPAFGSIEQAISSLHEVRHAPSGLLRVNTSRVAARTLIEPYLGEFMARYPLLRV 724386 + D + +A + + + + S L + + A + + EF A +P + V Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 724387 ELVMNDGMSNIIADGCDAGIRLGESLAEHMVAVPITPMIEMVVAGSPDYLARHGKPATPA 724566 +++ +G+ N+ A D G+ + +A ++ +P +LA G+ P Sbjct: 127 RILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLA--GRRVPPQ 184 Query: 724567 DLIAHNCL-CYRQTTSGAIYRWEFTSTDIEGHAFEVEPKGSVVTNDDDGMIRVALQGVGL 724743 DL+ L Q +R F T E P ++ N ++++AL G G Sbjct: 185 DLMEATLLVAEEQQRQWMGWRDWFRLTVGE---IGFRPARTISANSYPVLLQLALHGHGA 241 Query: 724744 IQHQDLALREQLAAGTLVRVLDAWCKPFPGYY--LYTPSREQMPA 724872 I + + +G LV DA F G Y ++ R PA Sbjct: 242 ILGWKHMITPLVESGKLVLASDAHAS-FGGAYQVIWPADRRDTPA 285 Score = 60.1 bits (144), Expect = 4e-07 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 3/146 (2%) Frame = -3 Query: 848763 LQTLV---AIAEHGTLMAAADALNVSQPAVTKSIKELEARLGVQLLERSGAGVRLTRYGE 848593 LQ LV A A HG AA+ LNV+Q AV+K + +LE LG L R + LTR G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 848592 MLLRRARAVVAEIASAERELEEMRTGAERTLSIGVSLLASSFAMPQALCAFRARLPDVRL 848413 R A++A+ A + M+ +L+I + ++ + + F A P+V + Sbjct: 69 QYADRVHAILADCVEATALV--MKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 848412 NVYECLPTQIIDGLRDGSFDLCVAFI 848335 + L + + L FD+ V +I Sbjct: 127 RI---LVREGVFNLNAAEFDIGVYYI 149 Score = 56.6 bits (135), Expect = 5e-06 Identities = 43/177 (24%), Positives = 73/177 (41%) Frame = -3 Query: 1306581 LQSMKAFVRVAEEGSFTGAASRMNTTTSYVSRAISALETHLRARLFNRSTRRIALTEAGE 1306402 LQ + F A G+FT AA +N VS+ + LET L LF R + + LT AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1306401 RYMRRCEQIFASIXXXXXXXXXXXARPSGRLRVHSPTSFGQSYVVPAVVAFRKQHPAVSV 1306222 +Y R I A S L + + ++ + F +HP VSV Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1306221 DLTLSQKVPDMLEEGYDVSLQLTATTLPDSGLISQRLGVLHSVLCASPSYLARHGLP 1306051 + + + V ++ +D+ + +P G+ + +P++LA +P Sbjct: 127 RILVREGVFNLNAAEFDIGVYY-IRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP 182 Score = 56.2 bits (134), Expect = 6e-06 Identities = 41/150 (27%), Positives = 71/150 (47%) Frame = -3 Query: 335280 LRQLKYFVTTVESGSVAEASRQLFIAQPSISSAIKGLEESFGVKLFIRHHAQGVSLTPSG 335101 L+ L +F G+ A+ +L +AQ ++S + LE G LF+R A+ + LT +G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVR-DAKALHLTRAG 67 Query: 335100 TRFYRKAQELLRISHEFEQNALADNDVITGQIDIGCFETVAPLYLPQLIAGFRERYPGVN 334921 ++ + +L + E AL + + I C A L+L IA F +P V+ Sbjct: 68 QQYADRVHAIL--ADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 334920 IRLRDGDQQELVQGLTSGTFDLALMYDHDL 334831 +R+ +E V L + FD+ + Y D+ Sbjct: 126 VRIL---VREGVFNLNAAEFDIGVYYIRDV 152 Score = 55.1 bits (131), Expect = 1e-05 Identities = 33/108 (30%), Positives = 56/108 (51%) Frame = -1 Query: 1139612 GSFAQGAQAVHRSPSAVSMQIKALEDALGKPLFIRDTRNVTPTDDGTMLAEYGRRMLAMR 1139433 G+F + A+ ++ + AVS Q+ LE LG LF+RD + + T G A+ +LA Sbjct: 22 GNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILADC 81 Query: 1139432 DEAWASVVRPEIRGRVTIGVPDDYISSLLPQVLGKFAAMHPRVEIRVI 1139289 EA A V++ + +TI + L + +F+A HP V +R++ Sbjct: 82 VEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Score = 52.8 bits (125), Expect = 7e-05 Identities = 40/138 (28%), Positives = 58/138 (42%) Frame = +2 Query: 1281734 LQSIRAFVTVAREGGFRRAATRLRVSTAMASRLVDALETRLGARLLQRSTCHQSLTEIGE 1281913 LQ + F AR G F RAA L V+ S+ V LET LG L R LT G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1281914 LYLARVERILGAIDEIDGRVVAMGSKPEGELRIAAPVAFGLSQLSALLDRFVNRFPDVRP 1282093 Y RV IL D ++ + M + L IA L+ + F P+V Sbjct: 69 QYADRVHAILA--DCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1282094 TVTLTDAHVDLTSEDIDV 1282147 + + + +L + + D+ Sbjct: 127 RILVREGVFNLNAAEFDI 144 Score = 48.1 bits (113), Expect = 0.002 Identities = 45/144 (31%), Positives = 67/144 (46%) Frame = +2 Query: 867932 PPLDTSLLHTFVAIADVRSFTGAGRRLNLSQSAVSAQIVRLEEQVGRALLVRNTRSVSLT 868111 PPL + F A A +FT A LN++Q AVS Q+V+LE +G L VR+ +++ LT Sbjct: 7 PPLQCLVF--FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLT 64 Query: 868112 EHGQMLLGYARAMLNLSDEARTRLGTGNAVDVTLRIGASEDFAGGWLPDVMRRHGVARRG 868291 GQ A+L EA T L +L I + A +L D + Sbjct: 65 RAGQQYADRVHAILADCVEA-TALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPE 123 Query: 868292 LRLNLTVDVGDSLFRRHANGEFDL 868363 + + + V G +F +A EFD+ Sbjct: 124 VSVRILVREG--VFNLNA-AEFDI 144 Score = 48.1 bits (113), Expect = 0.002 Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 10/233 (4%) Frame = -2 Query: 762664 KQGSLTAAAGVLHVTQSALSHSMKKLEQQLGTDIWLREGRSLRLTQAGQYLLAVANRVLP 762485 + G+ T AA L+V Q A+S + KLE LGT +++R+ ++L LT+AGQ + +L Sbjct: 20 RHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAIL- 78 Query: 762484 QLNLAEERLQQFAQGERGTLRIGMECHPCYQWLLKVVSPYLAAWPDVDVDVKQKFQFGGI 762305 + E + +L I +L ++ + A P+V V + + G+ Sbjct: 79 -ADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVR---EGV 134 Query: 762304 GALFGYEIDL------LVTPDPLDKPGLVFEPVFDYEQVLVVAGNHKLAKEEYVQPKQLS 762143 L E D+ V P + +V E V Y +AG V P+ L Sbjct: 135 FNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRR-------VPPQDLM 187 Query: 762142 NEVLVTYPVP----VDRLDIYSMFLTPAGIAPKRHKAIETTDIMLQMVASGRG 761996 L+ + D + + + G P R + + ++LQ+ G G Sbjct: 188 EATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHG 240 Score = 47.4 bits (111), Expect = 0.003 Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 2/179 (1%) Frame = +2 Query: 1181516 LQMMRIFVRVAEEGSFTSAAQRLDITTAYASRSVAQLEXXXXXXXXXXXXXXIALTDAGQ 1181695 LQ + F A G+FT AA+ L++ S+ V +LE + LT AGQ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1181696 RYLDRCQRILGYIXXXXXXXXXXXXKPSGRLHVHATTSFGQAYVVPAVVRYRQRYPSVAV 1181875 +Y DR IL S L + + ++ + + +P V+V Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1181876 ELTLSQHVPDIIDEGYDVSLQLSATELPDSGLVSQRL--GEVHSVLCASPAYLKERGTP 1182046 + + + V ++ +D+ + ++P G+ + +VH+ CA P +L R P Sbjct: 127 RILVREGVFNLNAAEFDIGVYY-IRDVPPPGIAGTAIVAEDVHA-YCA-PTFLAGRRVP 182 Score = 45.8 bits (107), Expect = 0.009 Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 1/145 (0%) Frame = -3 Query: 884553 LLTLKLFLSAVEEQQIGLAAIRENVAASTATKRIQDLEDIAGIKLLERSPKGVLPSPAGE 884374 L L F +A AA NVA +K++ LE G L R K + + AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 884373 VLVRYLRRIFANLDD-MRSEIAAFTDGMRGELTIASARSIIVPFLAREIGEFQRAYPLVN 884197 +Y R+ A L D + + + LTIA A FLA I EF +P V+ Sbjct: 69 ---QYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 884196 IVVRELDNAGIVQAAARGEADVGVF 884122 VR L G+ A E D+GV+ Sbjct: 126 --VRILVREGVFNLNA-AEFDIGVY 147 Score = 44.7 bits (104), Expect = 0.019 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 2/146 (1%) Frame = -3 Query: 1020567 LKWLEDFVELARTRSFTRAAENRFVTHPAFGRRIRSLEEWVGTRLIAR-TKPLELTAAGT 1020391 L+ L F AR +FTRAAE V A +++ LE ++GT L R K L LT AG Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1020390 VFLDAASNAL-DILHGARTQLQEAAPVLENNLRIATGRTLSATFFPDWYDETVARAGFFT 1020214 + D L D + ++E P ++L IA + F D E A + Sbjct: 69 QYADRVHAILADCVEATALVMKEQTP---HSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 1020213 ATISTGSAEEAILQLTAGDADMLIVY 1020136 I E + L A + D+ + Y Sbjct: 126 VRI---LVREGVFNLNAAEFDIGVYY 148 Score = 43.9 bits (102), Expect = 0.032 Identities = 22/70 (31%), Positives = 36/70 (51%) Frame = +3 Query: 305097 LKTLRLLVAVCDHRNMARAAEAVHIEPSAISKRIAQLESDLGVPLLTRSRRGVEPTAAGN 305276 L+ L A H N RAAE +++ A+SK++ +LE+ LG L R + + T AG Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 305277 ALLEHARSVL 305306 + ++L Sbjct: 69 QYADRVHAIL 78 Score = 43.9 bits (102), Expect = 0.032 Identities = 36/141 (25%), Positives = 58/141 (41%) Frame = -2 Query: 643618 LKLFVSAVEEQQIGLAAIRENIAASTATKRIQDLEDIAGVKLLERGPKGVSPSPAGEVLL 643439 L F +A AA N+A +K++ LE G L R K + + AG+ Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 643438 RYIRKMFDDLDDMRSEIASFTEGMQGELTVASARSIIVPFIAREVGEFGREYPRVELVIQ 643259 + + D + + + E LT+A A F+A + EF E+P V + I Sbjct: 72 DRVHAILADCVEATALVMK--EQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Query: 643258 ELENAEIVHAVARGEADVGVF 643196 E ++A E D+GV+ Sbjct: 130 VREGVFNLNA---AEFDIGVY 147 Score = 43.5 bits (101), Expect = 0.042 Identities = 28/78 (35%), Positives = 38/78 (48%) Frame = +1 Query: 988957 LPNLACLYAVQRVADTGSVSRAAATLFRAQSAVTRAVQEIETALGEPLFDRKPSGMLATP 989136 LP L CL A G+ +RAA L AQ AV++ V ++ET LG LF R + T Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 989137 VGRAVLKRGERVFAELGE 989190 G+ R + A+ E Sbjct: 66 AGQQYADRVHAILADCVE 83 Score = 41.6 bits (96), Expect = 0.16 Identities = 34/117 (29%), Positives = 47/117 (40%) Frame = +1 Query: 989278 LQLFSTLARHRHMPSAARTLGVTQPAVSSAIRILESGAGFALFHRHPRGLLLTTDGETFL 989457 L F ARH + AA L V Q AVS + LE+ G LF R + L LT G+ + Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 989458 LHVRRALNELRHVADDVAALHGSIQGVVTVGALPLGRTLMLPEAVARVVTRFPKVRV 989628 V L + V + +T+ TL L + +A P+V V Sbjct: 72 DRVHAILADC--VEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Score = 41.6 bits (96), Expect = 0.16 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Frame = +2 Query: 200705 ARYGTMAAAAEALHLTPSAVSQQISQLEEEAGVKLTERVGRGVRLTPAGHALAGHAERVM 200884 AR+G AAE L++ AVS+Q+ +LE G L R + + LT AG +A+RV Sbjct: 19 ARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQ---YADRVH 75 Query: 200885 VVL-DXXXXXXXXXXXXMVGELRVAAFPSIASLVLPDVLKKLRPAYP 201022 +L D L +A A+L L D + + +P Sbjct: 76 AILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHP 122 >ref|YP_195202.1|hypothetical protein Length = 410 Score = 125 bits (314), Expect = 8e-27 Identities = 83/261 (31%), Positives = 126/261 (48%), Gaps = 2/261 (0%) Frame = +3 Query: 4233 HAWHFDAHLVADFLKRWAXXXXXXXXXXXXXXXXXXXXGFISSLSTKEGRTLEADLFIDC 4412 HA H DA+ A++ K+ + G I+S+ G ++ADL++DC Sbjct: 59 HALHLDAYKTAEYFKKESIDNGVEYYDAKVLTTNREY-GNITSIELDNGLKIDADLYVDC 117 Query: 4413 SGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDDARVGIEPYTSSIAMNSGWTWKIP 4592 SG +L N + +ID + YL + AV ++ R + YT + AM GW W+IP Sbjct: 118 SGFSRVLNNH---QEWIDYTYYLPVNRAVVFSIEELTPR---KEYTLAKAMKYGWVWEIP 171 Query: 4593 MLGRFGSGYVFSSKFTSRDQATADFLHLWNLSDKQPLNQIKFRVGRNGRAWVNNCVAIGL 4772 + G GYV+ K+ S D + ++ +K L I+F GR NC+++GL Sbjct: 172 TRHKVGRGYVYCDKYASEDDILFELREVYGSIEK--LKSIEFSAGRINNFMDGNCLSVGL 229 Query: 4773 SSCFLEPLESTGIY--FIYAALYQLVKHFPDTSFDPRLREAFNAEIVYMFDDCRDFVQAH 4946 SS FLEPL++T I+ I L+ D D + +N I ++DD RDFV H Sbjct: 230 SSGFLEPLQATSIHCALIQIELFSYSFTTKDHLLDCNSVKRYNQLIARLYDDMRDFVSLH 289 Query: 4947 YFTTSREDTPFWRANRHDLRL 5009 Y T + DT FW + H R+ Sbjct: 290 Y-TGGKTDTEFWSSFVHPERV 309 >ref|NP_818340.1|gp39 Length = 628 Score = 117 bits (294), Expect = 2e-24 Identities = 96/337 (28%), Positives = 148/337 (43%), Gaps = 8/337 (2%) Frame = +2 Query: 550106 ADTLTPGAVVYVQSPQGNWLESFGTAVRGTNTPIPTNAHFRVGSVTKTWTGTVILQLVQE 550285 A+T PG ++ + P+GN+ +++GT V GT P+ + HFR+GS TK +T Q V + Sbjct: 92 AETGQPGVMLQITGPRGNYAKAYGTTVGGTVRPLTLDDHFRMGSSTKMFTAIAFFQAVDK 151 Query: 550286 GRLSLGDSVSKFVANVPNGDTITIEQLLTMRSGLYNYSTNL-AFNQTLDAQPDMVWT-TS 550459 G ++L D++ ++V +PNG IT+ +L+MRSG+ Y+ + A TL P WT Sbjct: 152 GLITLDDTLEQYVPGIPNGTAITMGHMLSMRSGIAEYTAGINALWITL--FPTWPWTGAK 209 Query: 550460 ELLGIAEGQPVYFPPGTDFRYSNTNTILLGLIIEQL--TGMSAADAMNARLFAPLGLANT 550633 + LG +G P F PGTD+ Y+N+N L+G+++E + + PLGL T Sbjct: 210 DFLGSMKG-PSNFYPGTDYLYTNSNFALIGMVLEIVDPAHRPIKQIFKEDIIDPLGLTET 268 Query: 550634 MLPPQQDTSLPAPAPQGYQWGTNAETTD-SDALSPQRQADAKSGVLQPTNVTSVNTSWAW 550810 PP P P P N D + AL+ K N ++ Sbjct: 269 SWPPIG----PVPPPASIADTFNPNFLDAAGALATNINDYTKFAEALRDNAMGLSPE--- 321 Query: 550811 TAGSGISTVTELAAYVQRMVGGGYLNADLQAQRLASCTPVDPTDPMSASYCLGLAKFGTF 550990 + + +ST + G Y+ P Y G+ FGT+ Sbjct: 322 SYDAWLSTFWKHPTGWDPYANGFYI-------------------PSEYYYGYGIESFGTW 362 Query: 550991 YGHTGEIPG---FNTFMGYDPVTKTTIVTWSNTAAAP 551092 +GH G G F D T+ SNT+ P Sbjct: 363 FGHPGLFSGGWSSTIFFERDSGATFTLHENSNTSNPP 399 >ref|NP_817358.1|gp20 Length = 628 Score = 117 bits (293), Expect = 2e-24 Identities = 98/339 (28%), Positives = 149/339 (43%), Gaps = 10/339 (2%) Frame = +2 Query: 550106 ADTLTPGAVVYVQSPQGNWLESFGTAVRGTNTPIPTNAHFRVGSVTKTWTGTVILQLVQE 550285 A+T PG ++ + P+GN+ +++GT V GT P+ + HFR+GS TK +T Q V + Sbjct: 92 AETGQPGVMLQITGPRGNYAKAYGTTVGGTVRPLTLDDHFRMGSSTKMFTAIAFFQAVDK 151 Query: 550286 GRLSLGDSVSKFVANVPNGDTITIEQLLTMRSGLYNYSTNL-AFNQTLDAQPDMVWT-TS 550459 G ++L D++ ++V +PNG IT+ +L+MRSG+ Y+ + A TL P WT Sbjct: 152 GLITLDDTLEQYVPGIPNGTAITMGHMLSMRSGIAEYTAGINALWITL--FPTWPWTGAK 209 Query: 550460 ELLGIAEGQPVYFPPGTDFRYSNTNTILLGLIIEQL--TGMSAADAMNARLFAPLGLANT 550633 + L +G P F PGTD+ Y+N+N L+G+++E + + PLGL T Sbjct: 210 DFLSTMKG-PSNFYPGTDYLYTNSNFALIGMVLEIVDPAHRPIKQIFKEDIIDPLGLTET 268 Query: 550634 MLPPQQDTSLPAPAPQGYQWGTNAETTD-SDALSPQRQADAKSGVLQPTNV--TSVNTSW 550804 PP P P P N D + AL+ K N S + Sbjct: 269 SWPPIG----PVPPPASIADMFNPNFLDAAGALATNINDYTKFAEALRDNAMGLSPESYE 324 Query: 550805 AWTAGSGISTVTELAAYVQRMVGGGYLNADLQAQRLASCTPVDPTDPMSASYCLGLAKFG 550984 AW +ST + + + G Y+ P Y G+ FG Sbjct: 325 AW-----LSTFWKHSTGWDQYANGFYI-------------------PSEYYYGYGIESFG 360 Query: 550985 TFYGHTGEIPG---FNTFMGYDPVTKTTIVTWSNTAAAP 551092 T++GH G G F D T+ SNT+ P Sbjct: 361 TWFGHPGLFSGGWSSTLFFERDSGATFTLHENSNTSNPP 399 >ref|NP_817913.1|gp62 Length = 496 Score = 112 bits (279), Expect = 1e-22 Identities = 106/370 (28%), Positives = 163/370 (44%), Gaps = 21/370 (5%) Frame = +2 Query: 549995 PAVMIGLAVSACGGDSSPTSNTPAFANAARPQIDALLADTLTP-----GAVVYVQSPQGN 550159 P + L +A SP PA AA IDAL+A L P GA+V + +P G+ Sbjct: 57 PVTLADLGTTATTTVPSPDDPLPADITAA---IDALVASKLKPNTKTDGALVGIVTPNGS 113 Query: 550160 WLESFGTAVRGTNTPIPTNAHFRVGSVTKTWTGTVILQLVQEGRLSLGDSVSKFVANVPN 550339 + +++G R + + R GS++K + T++L + G +S D++ +FV+ V N Sbjct: 114 YYKAYG-GDRTSGQTLTLAHRTRYGSISKMYCNTLVLAQIDAGHISFDDTLDQFVSGVAN 172 Query: 550340 GDTITIEQLLTMRSGLYNY-STNLAFNQTLDAQPDMVWTTSELLGIAEGQPVYFPPGTDF 550516 GD ITI LL M+SG+ +Y + A Q+ P T + I +P+Y PG Sbjct: 173 GDKITIRHLLMMQSGIKDYLGEDAAVQQSYFLNPTS--TFDPMPYIRSYEPMY-EPGESS 229 Query: 550517 RYSNTNTILLGLIIEQL-----TGMSAADAMNARLFAPLGLANTMLPPQQDTSLPAPAPQ 550681 YSN+NTILLG I+E G + A LGL T P L P + Sbjct: 230 SYSNSNTILLGKILEWCDAEYGAGRGIRQIILEDACATLGLDETEWP--TGNYLSPPYMR 287 Query: 550682 GYQWGTNAETTDSDA-LSPQRQADAKSGVLQPTNV--TSVNTSWAWTAGSGISTVTELAA 550852 G W N A L P G + T+V+T+WA AGS T+ +L Sbjct: 288 G--WTPNLALPQIQALLGPLAFLAGLFGYPTAAELEWTAVSTTWAGAAGSLGGTIYDLVK 345 Query: 550853 YVQRMVGGGYLNADL---QAQRLASCTPVDPTDPMSA----SYCLGLAKFGTFYGHTGEI 551011 + + + G L+ ++ Q + + DP P + L FG + G G + Sbjct: 346 FGEHLRDGTLLSPEMKRRQEEEFVTYVTYDPKGPWEGPGWMGFGLNTILFGYWQGWIGNL 405 Query: 551012 PGFNTFMGYD 551041 G+ + + Y+ Sbjct: 406 GGYISVLFYN 415 >ref|NP_075297.1|gp30 Length = 496 Score = 106 bits (265), Expect = 4e-21 Identities = 104/389 (26%), Positives = 168/389 (43%), Gaps = 25/389 (6%) Frame = +2 Query: 549995 PAVMIGLAVSACGGDSSPTSNTPAFANAARPQIDALLADTLTP-------GAVVYVQSPQ 550153 P + L A + SP A A R QIDAL+A + P GA+V +++P Sbjct: 57 PKTLAELEAEAATDELSPAD---PLAPAVRAQIDALVAAKMKPTSGKEADGAMVGIETPT 113 Query: 550154 GNWLESFGTAVRGTNTPIPTNAHFRVGSVTKTWTGTVILQLVQEGRLSLGDSVSKFVANV 550333 G++ +++G R N P+ +FR GS +K T++L+ + G + D++ +F+ + Sbjct: 114 GSYYKAYG-GDRTKNQPLFLEQNFRYGSCSKMACNTLLLREIDRGHVDWDDTLDQFIDGI 172 Query: 550334 PNGDTITIEQLLTMRSGLYNY-STNLAFNQTLDAQPDMVWTTSELLGIAEGQPVYFPPGT 550510 PNGD IT+ LL + GL ++ + A QT P + + L I PV F PGT Sbjct: 173 PNGDKITVRYLLLFQDGLKDWLQGDPAVQQTYFLNPTLNY--DPLAYIRASTPV-FEPGT 229 Query: 550511 DFRYSNTNTILLGLIIEQ-----LTGMSAADAMNARLFAPLGLANTMLPPQQDTSLPAPA 550675 D YSN T+L+G I+E TG SA + + +G+ + P T+ Sbjct: 230 DSHYSNAATLLMGKILEWCDAEFYTGRSARELIVEEWKNTVGMESLHWP----TTNYMNQ 285 Query: 550676 PQGYQWGTNAETTDSDA-LSPQRQADAKSGVLQPTNV----TSVNTSWAWTAGSGISTVT 550840 P W N A L P G PT+ T+V+T+W+ AGS + Sbjct: 286 PYVRGWTPNMALPQIQAILGPFAFLAGLLG--YPTSKDLEWTAVSTTWSDAAGSLAGNME 343 Query: 550841 ELAAYVQRMVGGGYLNADLQAQRLASCT---PVDPTDPMSASYCLGLAKFGTFYGH---- 550999 + + + + G +L+ ++ R T +P P +G +GH Sbjct: 344 DFVKFGKALYEGEFLSEEMNQLRKEIFTRYVEYEPAGPHQGPGWMGFGLNSICWGHWLGW 403 Query: 551000 TGEIPGFNTFMGYDPVTKTTIVTWSNTAA 551086 G + G+ + Y+ + I T N A Sbjct: 404 VGNLGGYIAVLFYNQDDGSVIATMLNNFA 432 >ref|NP_958576.1|putative protein Length = 126 Score = 100 bits (250), Expect = 2e-19 Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 2/123 (1%) Frame = +3 Query: 1276020 RVLLSIHPEYANAIFAGEKGFEFRRVIFK-EDVSEVVVYATSPISRVIGCFKIEEIYQDT 1276196 ++LLSI P+Y ++I G K FEFRR IFK +DV VVVYAT PI +V+G F+I+++ DT Sbjct: 2 KILLSIKPKYVSSIMNGTKKFEFRRKIFKRKDVDTVVVYATKPIGKVVGEFEIKQVISDT 61 Query: 1276197 PGELWVKTEARAGVTREMFDSYFKDRVKAFAIKVSEPTRFSRPQPLSKYLPSN-TPPQSF 1276373 P +W T AG+ + F +YF+ +AFAI++S+ T + + LS+ N PQSF Sbjct: 62 PKSVWNMTAQYAGLDKLDFYNYFEGLDEAFAIQISKVTPYKKQLDLSELEDGNLKAPQSF 121 Query: 1276374 CYI 1276382 Y+ Sbjct: 122 IYL 124 >ref|NP_039614.1|gene IV product Length = 428 Score = 91.7 bits (226), Expect = 1e-16 Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 5/242 (2%) Frame = -2 Query: 573478 QQVMLEVKVAEVSKTLINQMGSALNIQGGFGSWSGALVSNLLAGVAT-GIAFSKANNKPF 573302 +QV+++ + E S + + AL + G G S L ++T G +F N Sbjct: 197 EQVLIQSLMFETSVSNGVDLSFALALASGGKVAGGFNTSALGTALSTAGGSFGIFNGNIL 256 Query: 573301 NLAADAQNTDNLVKILAEPNLVTISGQEATFLAGGKIFIPIPQSSGNGTSSI----TLQE 573134 L+ A +D+ K+++ P ++T SGQ G + + +G S T++ Sbjct: 257 ALSLQAVQSDSNSKVISTPRILTQSGQSGYISVGQNVPFVTGKVTGEAASVNNPFQTIER 316 Query: 573133 EEFGVALKFTPTVLSNGRISLKVAPEVSELSQTGVTLSATNIGGTSILPLITTRRASTTV 572954 + GV+LK TP V+ NG++ L + + LS + A++I + R+ TTV Sbjct: 317 RDVGVSLKVTPVVMGNGQLVLTIDTKADSLSNQAI---ASDI-------ITNQRQIQTTV 366 Query: 572953 QMGDGETFAIGGLIKDNGTGALKALPGVGEIPVLGALLRSTSFQQDRTELIFVITPHLVK 572774 Q+ DG+T +GGLI N + +++P + +IP++G L RS S +D + ++T H+++ Sbjct: 367 QIKDGQTLLLGGLISSNQFDSDRSVPFMSKIPLIGWLFRSHSDSKDDRTMFVLLTAHVIR 426 Query: 572773 PL 572768 L Sbjct: 427 AL 428 >ref|NP_046572.1|ABC transporter Length = 705 Score = 91.7 bits (226), Expect = 1e-16 Identities = 62/210 (29%), Positives = 106/210 (50%) Frame = +3 Query: 1102587 DNDRAVFDGLNLTIRPGERIGLIGRSGAGKSTLVNLLLRFYDVGGGTIRIDGQDIAHVTQ 1102766 D R + + +NL + +++ +IG SG GKST L + Y V +I ++G DI Sbjct: 493 DPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDH 552 Query: 1102767 DSLRSAIGMVTQDTSLLHRTMRENLLYGRPDATEREMHDAAVRAEASEFIDRLRDRHGRS 1102946 S+R I + ++ L T++ENL G + E+ +A + ++ EFI L + Sbjct: 553 LSIRKRIVYIDENPFLFKGTIKENLCMGE-IFDQNEIENACIMSQCHEFICNLDKQ---- 607 Query: 1102947 GYDVEVGERGVKLSGGQRQRVAIARVMLKDAPILVLDEATSALDSEVEVAIQRSLDGLMH 1103126 Y ++ E G LS GQ+QR+A+AR +L +L+LDE+ S +D + I +L + Sbjct: 608 -YSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM-- 664 Query: 1103127 GKTVIAIAHRLSTIAAMDRLIVLDEGRIVE 1103216 +I I H + ++ +V RI+E Sbjct: 665 DCLIILITHNDPSNFKYNKKLVFRNNRIIE 694 Score = 70.5 bits (171), Expect = 3e-10 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 11/209 (5%) Frame = +1 Query: 276811 GAD----VIKDVSLDIEDGEFMVFVGPSGCGKSTMLRMLAGLEEITSGDLLIDGRRVN-- 276972 GAD +++D++L ++ + ++ +G SG GKST + L+ L ++ + ++G +N Sbjct: 491 GADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRY 550 Query: 276973 DVPAAKRGLAMVFQNYALYPHMTVFENMAFGLKLAGVDAAETRTRVGQAAEAL-----RL 277137 D + ++ + + +N L+ T+ EN+ G ++ + E + Q E + + Sbjct: 551 DHLSIRKRIVYIDENPFLFKG-TIKENLCMG-EIFDQNEIENACIMSQCHEFICNLDKQY 608 Query: 277138 SALLDRKPKALSGGQRQRVAIGRAIVRKPGVFLFDEPLSNLDAALRGGMRLELARLHREL 277317 S L LS GQ+QR+A+ RAI+ +P V + DE LSN+D +L LHR + Sbjct: 609 SYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKLIYETLHR-M 664 Query: 277318 GSTMIYVTHDQVEAMTLGDRIAVFNGGRI 277404 +I +TH+ ++ VF RI Sbjct: 665 DCLIILITHNDPSNFKYNKKL-VFRNNRI 692 Score = 69.3 bits (168), Expect = 7e-10 Identities = 56/239 (23%), Positives = 116/239 (48%), Gaps = 7/239 (2%) Frame = +2 Query: 962966 EGSAEDMIELDKLT--KTFSRKDGQAVRA--VDAVSLSVAEGEICVFLGPSGCGKTTTLK 963133 + S E++ ELD + KT + G V+ ++L + + + +G SG GK+T K Sbjct: 468 QDSNENLTELDFIQNIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAK 527 Query: 963134 MINRLIAPTSGRVLINGEDTAQLDEVDLRRHIGYVIQQIGLFPNMTIEENITVVPRLLGW 963313 +++L + +NG D + D + +R+ I Y+ + LF TI+EN+ + + Sbjct: 528 SLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKG-TIKENLCM-GEIFDQ 585 Query: 963314 DKKRCA---ERARDLMAMVALDPKLYLKRYPRELSGGQQQRIGVIRALAADPPVLLMDEP 963484 ++ A + + + + L LS GQ+QR+ + RA+ P VL++DE Sbjct: 586 NEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDES 645 Query: 963485 FGAVDPINRESIQNEFFQMQRQLNKTVIMVSHDIDEAIKLGDRIAVFRRGQLVQYDHPD 963661 +DP N + I ++ +++ +I+++H+ K ++ VFR ++++ + + Sbjct: 646 LSNIDPDNTKLI----YETLHRMDCLIILITHNDPSNFKYNKKL-VFRNNRIIESSYSE 699 Score = 60.5 bits (145), Expect = 3e-07 Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 6/202 (2%) Frame = -2 Query: 1112710 VDNVNLTIAKNELFALLGSSGCGKSTLLRMLAGLETATSGKIFVDGEDLASLP--PYRRP 1112537 V+++NL + + + ++G SG GKST + L+ L I+++G D+ R+ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 1112536 VNMMFQSYALFPHMSVESNVAFG--LKQEGTPKHEIRERVADALALV--QMSKYAQRKPH 1112369 + + ++ LF +++ N+ G Q I + + + + Q S Sbjct: 559 IVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGS 617 Query: 1112368 QLSGGQQQRVALARSLVKRPKLLLLDEPMSALDKKIRQKTQLELVNIIEQVDVTCVMVTH 1112189 LS GQ+QR+ALAR+++ +P++L+LDE +S +D T+L + + ++D +++TH Sbjct: 618 NLSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKL-IYETLHRMDCLIILITH 673 Query: 1112188 DQEEAMTMASRLAVMSEGKIVQ 1112123 + +L V +I++ Sbjct: 674 NDPSNFKYNKKL-VFRNNRIIE 694 Score = 59.7 bits (143), Expect = 6e-07 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%) Frame = -2 Query: 1010974 VSLRVMRGQVVTLIGANGAGKSTLLKCVSGLLPATRDAVRLFGRPVGGLPPNALVGHGLA 1010795 ++L + R V +IG +G GKST K +S L ++ L G + + + + Sbjct: 502 INLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYD-HLSIRKRIV 560 Query: 1010794 MVPEGRRLFGPMTVRENLELGAYSRRDTAGIARSMARCLSLLPDL----TAKLDKPAGSL 1010627 + E LF T++ENL +G ++ A M++C + +L + KL + +L Sbjct: 561 YIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNL 619 Query: 1010626 SGGQQQMVAVARALMAEPKLLLLDEPTIGLAPAVVDHIARVVREVSRDGVDVLLVEQN 1010453 S GQ+Q +A+ARA++ +P++L+LDE + P D+ + + R ++L+ N Sbjct: 620 STGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKLIYETLHRMDCLIILITHN 674 Score = 45.1 bits (105), Expect = 0.015 Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 15/194 (7%) Frame = -2 Query: 13393 SGSGKSTLIKTVNGLEPFQQGEILVNDQSVGDRKTNLSKLRSKVGMVFQHFELFPHLSIT 13214 SG+GKST K+++ L I +N + +R +LS +R ++ + ++ LF +I Sbjct: 518 SGTGKSTFAKSLSKLYKVPDKSIYLNGLDI-NRYDHLS-IRKRIVYIDENPFLFKG-TIK 574 Query: 13213 ENLTLAQVKVLGRGKDEANEKGLKLLDRVGLKAHAHKF---------------PGQLSGG 13079 ENL + ++ + NE ++ + + H+F LS G Sbjct: 575 ENLCMGEIF-------DQNE-----IENACIMSQCHEFICNLDKQYSYKLSENGSNLSTG 622 Query: 13078 QQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMVELAQEGMTMMVVTHEMGFAK 12899 Q+QR+A+ARA+ P ++ DE S +DP+ + + L + ++++TH Sbjct: 623 QKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYET---LHRMDCLIILITHNDPSNF 679 Query: 12898 KVAHRVIFMDKGAI 12857 K +++F + I Sbjct: 680 KYNKKLVFRNNRII 693 Score = 44.7 bits (104), Expect = 0.019 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 2/182 (1%) Frame = -1 Query: 1011716 VSDLSLEIREREILGLIGPNGAGKSTTFNLLSGFLVPSGGRLEIGGHDMTGRSPETISRH 1011537 V D++L + ++ + +IG +G GKST LS + + G D+ R R Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDI-NRYDHLSIRK 557 Query: 1011536 GLVRTFQHGSLMRTMTVEDNILIGAIGGMRGTSHXXXXXXXXXXXELVGLQ--QVLGDTA 1011363 +V ++ L + T+++N+ +G I + + Q L + Sbjct: 558 RIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENG 616 Query: 1011362 GDLPHGLQRLVSIAIAFAPRPRLLCLDEPLTGLNQTEVAAVLETFRTIRDRFDTSILLVE 1011183 +L G ++ +++A A +P++L LDE L+ ++ + ET R D I+L+ Sbjct: 617 SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLH----RMDCLIILIT 672 Query: 1011182 HN 1011177 HN Sbjct: 673 HN 674 Score = 42.7 bits (99), Expect = 0.072 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = -3 Query: 632025 SDLSGGQHTRLLLGRAVLTQPNLLLLDEPSNHLDLPSLLWLENFLRRWQGGFILVSHD 631852 S+LS GQ RL L RA+L QP +L+LDE +++D + + L R IL++H+ Sbjct: 617 SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMDCLIILITHN 674 >ref|NP_835645.1|putative transposase Length = 246 Score = 91.7 bits (226), Expect = 1e-16 Identities = 64/207 (30%), Positives = 92/207 (44%), Gaps = 1/207 (0%) Frame = +3 Query: 329070 VEQPVPHAT-SVIGIDVGIARFATMSDGTFIAPLNSFRKHEARLRRCQRAMSRKVKFSNS 329246 VE P P IG+D+GIA AT+SDGT + + + AR R +R++ RK Sbjct: 18 VETPPPEDEHGWIGVDLGIASIATLSDGTVFSG-DQIERVRARYERTRRSLQRK------ 70 Query: 329247 WKKAKARVQRIHARIGNARRDYLHKATTTISKNHAMACIEDLQVRNMSRSAAGSIDAPGK 329426 +R+ R+ R + TIS+ I D + + K Sbjct: 71 ---GTRGAKRVLKRLSGRERRFQQAINHTISRR-----IVDRAIAEGKGVRLEDLSGIRK 122 Query: 329427 NVRAKSGLNKAILDQGWCEFRRQLEYKLAWNGGWLVAVPPANTSRTCPACGYVSADNRTT 329606 +VR + + I + + R ++ YK A G + P TS+ CP CG+ NR + Sbjct: 123 SVRVRKSQRRRIHRWAFYDLRIKIAYKCALAGVPFELIDPRYTSQRCPVCGHTERANRKS 182 Query: 329607 QEKFACVECSYEENADVVGALNILARG 329687 Q KF C C E NADVVGA+NI G Sbjct: 183 QSKFVCRSCGLEANADVVGAINIALGG 209 >ref|YP_195262.1|hypothetical protein Length = 231 Score = 91.3 bits (225), Expect = 2e-16 Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 3/190 (1%) Frame = -1 Query: 450767 EAAQLVERLRAAQWIDGRATAGAQS---RRVKENRQLDGDDPLAREIGDEIIRRLAQNAV 450597 E ++ E+ A DG ++ +++K ++++DG+ R D I + + +NA+ Sbjct: 12 EVRRINEQYDKAALKDGTVKINLENSVEKQLKNSKEIDGNTSHYRYCLDLIQKAMRRNAL 71 Query: 450596 FMSAALPKRIYPPLFNRYAGGESFGYHVDNAVRGIRASRERVRTDLSATLFLNDPASYDG 450417 F + + I PP+ YA G + HVD+ + +RTD S TLFL++P Y+G Sbjct: 72 FKTTYILGEITPPIMVEYAEGCYYIPHVDSI------QIQNLRTDHSMTLFLSEPDEYEG 125 Query: 450416 GELVVRDTYGEHHAKLAAGSMILYPGSSVHKVEPVTRGERLASFFWVESLVREDAQRSLL 450237 GELV+ K AG++I+YP +H+V P+T G+R S W S++ + R L Sbjct: 126 GELVIGIGDVAKSFKEKAGTVIMYPTGMLHEVRPITSGKRRVSVMWATSIIDDTFMRHEL 185 Query: 450236 LDMDVAIQRL 450207 ++ + ++++ Sbjct: 186 INFGMGLKKI 195 >ref|NP_758949.1|ORF58 Length = 210 Score = 90.5 bits (223), Expect = 3e-16 Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 1/179 (0%) Frame = +1 Query: 1172602 HILRKTPWRNLMAFKIAVSNQKGGTGKTTISVNIAAAFEAGGNKVALIDADPQGTSVRWV 1172781 HI R+ N MA IA+ NQKGG GKTTIS N+A+ A G+KV L+D DPQG++ W Sbjct: 11 HINRE---ENEMAKLIAILNQKGGAGKTTISTNVASQLHADGHKVLLVDLDPQGSATDWS 67 Query: 1172782 TSGENTLPMTVLSLAPAGRGIGGEIKKQDANFDVIV-VDCPGNLEDPRIASVLEVADFCL 1172958 E + + G+ +I K + ++ +V VD + D A+ + AD L Sbjct: 68 EQAEE--GSEAVPVIRMGKTCTCDIHKVASGYEYLVSVDGAPQVAD-LAATAVRAADMVL 124 Query: 1172959 VPLSPSPADLYSTVAMIRMIESMRSVRNPNLSSALMLNSVNGKTKMREEILKILRAEEI 1173135 +P PSP D +S ++ ++++ + V + +A +++ +TK+ EI + L E+ Sbjct: 125 IPTQPSPYDCWSAAELVEIVKARQEVTDGIPKAAFIISRAIKRTKLEAEIKEALDYYEL 183 >ref|NP_071814.1|unknown Length = 129 Score = 89.0 bits (219), Expect = 9e-16 Identities = 44/121 (36%), Positives = 72/121 (59%) Frame = +3 Query: 1276020 RVLLSIHPEYANAIFAGEKGFEFRRVIFKEDVSEVVVYATSPISRVIGCFKIEEIYQDTP 1276199 +VLLS+ P+Y I +G+K +EFR+ I+K+ ++EV +Y+T+P +++ F ++ ++ P Sbjct: 2 KVLLSVKPKYVEKIMSGDKRYEFRKTIWKKKINEVYIYSTTPEKKIVASFTYNKVIKEDP 61 Query: 1276200 GELWVKTEARAGVTREMFDSYFKDRVKAFAIKVSEPTRFSRPQPLSKYLPSNTPPQSFCY 1276379 LW +G+T+ F YF+ K +AI + E F P LS L + PPQSF Y Sbjct: 62 QTLWEFYHEESGLTQGEFFDYFRGIKKGYAIPIKELKPFDPPLELS--LNNIRPPQSFRY 119 Query: 1276380 I 1276382 I Sbjct: 120 I 120 >ref|NP_040579.1|G IV protein Length = 437 Score = 88.6 bits (218), Expect = 1e-15 Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 11/247 (4%) Frame = -2 Query: 573475 QVMLEVKVAEVSKTLINQMGSALNIQGGFGSWSGALVSNLLAGVATGIAFSKA------- 573317 QV+++ + E S L+N +++ GS SG V+ A G A S A Sbjct: 207 QVLIQSLMFETS--LVN----GVDLSFAAGSASGDKVAGGFNTSALGTALSTAGGSFGIF 260 Query: 573316 NNKPFNLAADAQNTDNLVKILAEPNLVTISGQEATFLAGGKIFIPIPQSSGNGTSSI--- 573146 N L+ A D+ K+++ P ++T SGQ G + + +G + Sbjct: 261 NGNVLALSIQAVKNDSNSKVISTPRILTQSGQTGYISVGQNVPFVTGKVTGEAANVNNPF 320 Query: 573145 -TLQEEEFGVALKFTPTVLSNGRISLKVAPEVSELSQTGVTLSATNIGGTSILPLITTRR 572969 T++ + GV+LK TP V+ NG++ L + + L+ ++A++I + R Sbjct: 321 QTIERRDVGVSLKVTPVVMGNGQLVLTIDTKADSLTSQ---MTASDI-------ITNQRH 370 Query: 572968 ASTTVQMGDGETFAIGGLIKDNGTGALKALPGVGEIPVLGALLRSTSFQQDRTELIFVIT 572789 TTVQ+ DG+T +GGLI N T +++P +PV+G L RS S + + ++T Sbjct: 371 MQTTVQIKDGQTLLLGGLIDSNTTDGNRSVPWFESVPVIGWLFRSHSDSHNERTMFVLLT 430 Query: 572788 PHLVKPL 572768 H++K L Sbjct: 431 AHVIKAL 437 >ref|NP_438138.1|hypothetical protein Length = 125 Score = 88.2 bits (217), Expect = 1e-15 Identities = 36/120 (30%), Positives = 68/120 (56%) Frame = +3 Query: 1276014 KKRVLLSIHPEYANAIFAGEKGFEFRRVIFKEDVSEVVVYATSPISRVIGCFKIEEIYQD 1276193 K ++SI P++ + I G K FEFR+ K +Y+T P+ +++G F I+++ +D Sbjct: 3 KIEAIISIKPQFVDEIMKGNKRFEFRKSFLKSIPDRCYIYSTKPVGKIVGFFTIKQVLRD 62 Query: 1276194 TPGELWVKTEARAGVTREMFDSYFKDRVKAFAIKVSEPTRFSRPQPLSKYLPSNTPPQSF 1276373 P ++W KT ++G+T++ FD Y+ + KA AI++ + P+ + PPQ++ Sbjct: 63 EPEKIWQKTSKKSGITKDFFDEYYSGKNKAVAIEIDRLFAYKTPKNYHEIDIKGKPPQTY 122 >ref|NP_795574.1|hypothetical protein Length = 125 Score = 88.2 bits (217), Expect = 1e-15 Identities = 36/120 (30%), Positives = 68/120 (56%) Frame = +3 Query: 1276014 KKRVLLSIHPEYANAIFAGEKGFEFRRVIFKEDVSEVVVYATSPISRVIGCFKIEEIYQD 1276193 K ++SI P++ + I G K FEFR+ K +Y+T P+ +++G F I+++ +D Sbjct: 3 KIEAIISIKPQFVDEIMKGNKRFEFRKSFLKSIPDRCYIYSTKPVGKIVGFFTIKQVLRD 62 Query: 1276194 TPGELWVKTEARAGVTREMFDSYFKDRVKAFAIKVSEPTRFSRPQPLSKYLPSNTPPQSF 1276373 P ++W KT ++G+T++ FD Y+ + KA AI++ + P+ + PPQ++ Sbjct: 63 EPEKIWQKTSKKSGITKDFFDEYYSGKNKAVAIEIDRLFAYKTPKNYHEIDIKGKPPQTY 122 >ref|NP_818300.1|gp250 Length = 442 Score = 88.2 bits (217), Expect = 1e-15 Identities = 119/426 (27%), Positives = 180/426 (42%), Gaps = 45/426 (10%) Frame = +3 Query: 1179921 VVVGAQWGDEGKGRVVDWLAA--QADLVARYNGGHNAGHTLVV-GGKTYKLALLPSGVVR 1180091 +V +GD GKG VDWL + LV R+NGG AGH +V+ G ++ + S + Sbjct: 8 IVTDLGYGDAGKGTTVDWLCGGDPSTLVVRHNGGSQAGHNVVLDDGTHHEFSQFGSAFLH 67 Query: 1180092 GKRGVIGNGVALDPEALLAEIGRMAELGLSVTPDNLS---IAENATLVLPIHRAIDQAQE 1180262 G + V ++P ++ E + E+ T D LS + A +V P H A+ + + Sbjct: 68 GAVTFLSRYVMVNPLDMIEEAKHLDEVSQLETTDALSMMFVDAQAKVVTPYHVALQRLKA 127 Query: 1180263 RLRREPIGTTLRGIGPAYEDKVGRRGL--RVGDLAEPGRLAAKLDVLVDH--HNAWFRGL 1180430 R G+ +GIG A + L RVG L + L L+ L + + A G Sbjct: 128 YARG---GSCGKGIGEAVRQHLAMPNLTIRVGHLRDLS-LRTSLEQLRHYLLNAADVAGR 183 Query: 1180431 GLDEYS-------RDAMLATLVDLAPRILPFVRPV--------WADLNDATDRGERILFE 1180565 D+ S D L++ LA R + + V W L G ++FE Sbjct: 184 REDDDSFIDRTVLEDRFLSS--HLAERYYAWTKRVGIVDDGDTW--LGRYLRGGHTVIFE 239 Query: 1180566 GSQAVMLDIDWGTYPFXXXXXXXXXXXXXXXXXXXXKLGHV-LGVTKAYATRVGGGPFLT 1180742 G+Q V+LD G +P+ ++ + LGV ++YATR G GPF+T Sbjct: 240 GAQGVLLDEWAGFHPYTTWSTTTPQNALALTTAARSQVAPINLGVVRSYATRHGNGPFVT 299 Query: 1180743 ELSDATGETLRARGQEFGVNTGRPRRCGWLDAAQLRQAVRISG-IDSLALTKLDVLDGF- 1180916 E D + E G+ G+ R+ G LD LR A + G +D L +T LD D + Sbjct: 300 E--DPELDFDEPHNHE-GMWQGKFRQ-GHLDLVALRYAASVCGQLDGLVVTHLD-RDKWR 354 Query: 1180917 -ESIELCVGYEFD----------------GARVDHLPASLDAQSRAKPVYERFDGWRGTV 1181045 ++C Y D GAR +D AKPVY+ D T+ Sbjct: 355 GRDFQVCERYLTDTGLVVSEIQPPVQIGPGARTKQTQVLMD----AKPVYDD-DDMHLTL 409 Query: 1181046 KGVRER 1181063 G+ +R Sbjct: 410 DGLLDR 415 >ref|YP_195155.1|hypothetical protein Length = 372 Score = 87.0 bits (214), Expect = 3e-15 Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 1/163 (0%) Frame = +1 Query: 590536 ILLIGHTGTGKTSLIEQAAALAGHGVLRSNMNGQTTVGDFVGFWTVKGGETIWVDGVLPT 590715 + + G +G GKT +EQA A+ ++R N+ +T D +G + + GET+W +G + Sbjct: 118 VFITGLSGNGKTFSVEQACAVLKRELIRVNITIETDEDDLIGGFRLLNGETVWHNGPVVE 177 Query: 590716 AMREGLWLIVDEIDFAEPAILAVLTAVLEPAGRLLLKEKGNEIVVPHPSFRLFATANAVG 590895 A+ G L++DE+D A IL L ++LE G + LK+ G V P F + ATAN G Sbjct: 178 ALERGAILLLDEVDLASNKILC-LQSILEGKG-IFLKKTG-RYVEPAAGFNIIATANTKG 234 Query: 590896 AMGQFRHLYQGANVMNEAFLDRWRV-YRLDYLPPPDEARVLQR 591021 G + G NV+NEAFL+R+ + + +Y E +L++ Sbjct: 235 -KGSDDGRFIGTNVLNEAFLERFALTFEQEYPSTKVETTILKK 276 >ref|NP_861745.1|RB69ORF055c hypothetical protein Length = 211 Score = 84.3 bits (207), Expect = 2e-14 Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 10/187 (5%) Frame = -1 Query: 783479 ALAGVAARLDANFDAAVETIL-----GSRGRVVVCGMGKSGIVGRKIAATLSSTGTPGFF 783315 A+A V ++ A ++A +ET+ RV++ G+GK+ + K + T +S G P + Sbjct: 22 AMAKVISQNPARYNAILETLRRPGLSNYESRVIITGVGKNANIATKASETFASLGIPSMY 81 Query: 783314 MHPGEAYHGDLGMVTPDDTFLAISNSGETDEVI---KLIPFLRNNGNDLIALTGNPSSTL 783144 ++ G HGD G + P+D + IS SG+T+E+I K + +R N ++ L NP Sbjct: 82 LNTGHYSHGDAGFIAPNDVLIHISRSGKTEEMIGVAKHLKMIRPNVKQIL-LHCNPDIPQ 140 Query: 783143 ASAARVHLDI--GVEREACPXXXXXXXXXXXXXAMGDALAVTLMRARGFQPEHFARFHPG 782970 + A G+ E A+ D A+ L RGF F +FHPG Sbjct: 141 ENEALFDYSFCTGIAVEVDENSLAPTMSTTLLLALIDTFAINLSSERGFTSNDFLKFHPG 200 Query: 782969 GSLGRRL 782949 G+LG L Sbjct: 201 GALGAML 207 >ref|NP_071813.1|unknown Length = 492 Score = 82.4 bits (202), Expect = 8e-14 Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 16/308 (5%) Frame = +2 Query: 1275005 KFKNISLGDPFFDSLKSDYDEFGEWF--LKKSEHQAYTFRNKAGLLDGFLYLKQEDGPVL 1275178 K ++ D FD L+ +Y +F +W +K+ + G L K+E+ P+ Sbjct: 160 KANMLNFEDKIFDGLRKEYPDFDDWLKKIKREGRDVLFYEKDDGSYGALLIYKEEEEPIP 219 Query: 1275179 DSTPPLPGARRLKIGTFKINPHGTRLGERFIKRAFDVAVHARVDAIYVTIFAKH-KALVD 1275355 LP RRLK+ T + G ++GE FI+ + A+ + +Y+T + K LV Sbjct: 220 LDNDQLPLKRRLKLSTLIVTETGYKVGEFFIRWSLHYALKNNFEEVYLTHYTKEDDYLVK 279 Query: 1275356 LFFRYGFLQKAIKQTANG--------QELVLERRLDLVFKDVVLDYPRIPIGTG-RHFVL 1275508 L YGF + K+ + L+ E + + ++ YP+ G + F++ Sbjct: 280 LISEYGFEKVGSKKRYGNPQPEDVFLKSLITEGK-PVSTAEIKKCYPKFYDGPDVKKFLV 338 Query: 1275509 SLYPQWHSRLLPDSLLRTESSSILQDIS---HTNSIHKIYLAAMSGVEQLRRGDTLLIYR 1275679 + ++H +L ++ R +S+L+ S NSI KIYL + S +++L GD L+ Y+ Sbjct: 339 PIKGEYHDKLFIETYNR--QTSLLETYSFLVEGNSIKKIYL-SNSKIKKLAPGDILIFYK 395 Query: 1275680 TAEGGSAYYTSVVTSLCVVEELTNVKNFATVEQFLAYCAPYSIFSELE-LRNFYKSRRYP 1275856 + + T CV + ++F +E Y ++F E E L+NF + + Sbjct: 396 SRK---------KTISCVGVVVDVKRDFDNLENLRNYVWKRAVFYEEEDLKNFVQGQAIS 446 Query: 1275857 WVIRFTYN 1275880 ++ +N Sbjct: 447 FIFIGCFN 454 >ref|NP_046960.1|unknown Length = 127 Score = 80.9 bits (198), Expect = 2e-13 Identities = 36/106 (33%), Positives = 64/106 (60%) Frame = +3 Query: 1276020 RVLLSIHPEYANAIFAGEKGFEFRRVIFKEDVSEVVVYATSPISRVIGCFKIEEIYQDTP 1276199 +VLLS+ P+Y I +G+K +EFR+ I+K+ ++EV +Y+T+P +++ F +++ ++ P Sbjct: 2 KVLLSVKPKYVEKIMSGDKRYEFRKTIWKKKINEVYIYSTTPEKKIVASFTYDKVIKEDP 61 Query: 1276200 GELWVKTEARAGVTREMFDSYFKDRVKAFAIKVSEPTRFSRPQPLS 1276337 LW +G+T+ F YF+ K +AI + E F P LS Sbjct: 62 QTLWEFYHEESGLTQGEFFDYFRGIKKGYAIPIKELKPFDPPLELS 107 >ref|NP_047359.1|maturation protein Length = 429 Score = 80.5 bits (197), Expect = 3e-13 Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 6/210 (2%) Frame = -2 Query: 573379 SGALVSNLLAGV--ATGIAFSKANNKPFNLAADAQNTDNLVKILAEPNLVTISGQEATFL 573206 +G + ++ L V +TG +F N L+ A T + +L+ P ++T+SGQ TF Sbjct: 230 AGGINTDRLTSVLSSTGGSFGIFNGNILGLSLKALETSSKSTLLSMPRILTMSGQPGTFT 289 Query: 573205 AGGKIFIPIPQSSGNGTSSI----TLQEEEFGVALKFTPTVLSNGRISLKVAPEVSELSQ 573038 AG + + +G + T++ + G++LK P V G + + V+ +S Sbjct: 290 AGQNVPFVTGRVTGEAANVNNPFQTIERHDVGISLKVVPVVTPGGLLIMDVSTNADSISD 349 Query: 573037 TGVTLSATNIGGTSILPLITTRRASTTVQMGDGETFAIGGLIKDNGTGALKALPGVGEIP 572858 + +A++I + TR STTVQ+ G+T +GG++ + + + ++P V +IP Sbjct: 350 SQ---TASDI-------ITNTRSISTTVQLKSGQTVLLGGMVDNRESDSDSSVPWVSKIP 399 Query: 572857 VLGALLRSTSFQQDRTELIFVITPHLVKPL 572768 ++GAL S S ++ L +I +V L Sbjct: 400 LIGALFTSKSSNANKRTLYILIRARVVNLL 429 >ref|NP_510894.1|phage assembly protein Length = 426 Score = 77.8 bits (190), Expect = 2e-12 Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 11/247 (4%) Frame = -2 Query: 573475 QVMLEVKVAEVSKTLINQMGSALNIQGGFGSWSGALVSNLLAGVATGI------AFSKAN 573314 Q+++E + EV Q G AL+ GS G + + T + +F N Sbjct: 197 QILIEGLIFEV------QQGDALDFSFAAGSQRGTVAGGVNTDRLTSVLSSAGGSFGIFN 250 Query: 573313 NKPFNLAADAQNTDNLVKILAEPNLVTISGQEATFLAGGKI-FIP--IPQSSGNGTSSI- 573146 L+ A T++ KIL+ P ++T+SGQ+ + G + FI + S N + Sbjct: 251 GDVLGLSVRALKTNSHSKILSVPRILTLSGQKGSISVGQNVPFITGRVTGESANVNNPFQ 310 Query: 573145 TLQEEEFGVALKFTPTVLSNGRISLKVAPEVSELSQTGVTLSATNIGGTSILPLITTRRA 572966 T++ + G+++ P ++ G I L + + LS + T +IT +R+ Sbjct: 311 TIERQNVGISMSVFPVAMAGGNIVLDITSKADSLSSS-----------TQASDVITNQRS 359 Query: 572965 -STTVQMGDGETFAIGGLIKDNGTGALKALPGVGEIPVLGALLRSTSFQQDRTELIFVIT 572789 +TTV + DG+T +GGL T +P + +IP++G L S S + + L ++ Sbjct: 360 IATTVNLRDGQTLLLGGLTDYKNTSQDSGVPFLSKIPLIGLLFSSRSDSNEESTLYVLVK 419 Query: 572788 PHLVKPL 572768 +V+ L Sbjct: 420 ATIVRAL 426 >ref|NP_817650.1|gp61 Length = 274 Score = 76.6 bits (187), Expect = 5e-12 Identities = 75/257 (29%), Positives = 114/257 (44%), Gaps = 5/257 (1%) Frame = +2 Query: 257585 PIMFHHGWPLSGDDWDAQMLFFVQKGYRVVAHDRRGHGRSAQVSDGHDMDHYAADAFAVV 257764 P++F HG +S ++ ++ Q+G+ V A D HGR+ + GH ++ + Sbjct: 26 PLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDSLPFGHTVEEMTRVTLRAL 85 Query: 257765 EALDLRNAVHIGHSTGGGEVARYVAKHGEPAGRVAKAVLVSAVPPLMLKTASNPEGLPLE 257944 +AL + AV +GHS GGG VA ++ E RV A+L+ A A L+ Sbjct: 86 DALGIDQAVFVGHSMGGGMVAEIAPRYPE---RVLAAILLDAA-------AGKEHHANLK 135 Query: 257945 VFDGFRKALADNRAQFFLDVPSGPFYGFNREGATVHQGVIRNWWRQGMEGS--AKAHYEG 258118 D R + A +DV + AT G+ + R G +A Y Sbjct: 136 --DPLRATQRLSGA--VVDVLGDTYQAIKLRSATEGLGLAQTL-RSSFAGFRFVRAAYAL 190 Query: 258119 IKAFSETDQTEDLKSISVPTLVLHGEDDQIVPIADAALKSIKLLKNGTLKTYPGYSHGML 258298 +KA +E + +K++ V T V+HG DQIVP AA KS G L G+ ML Sbjct: 191 LKADTEP-LLKAMKALDVQTAVIHGLSDQIVPF--AAGKSAAEASGGALYAVEGFHSWML 247 Query: 258299 T---VNADVLNADLLAF 258340 + A+V+ LL F Sbjct: 248 ADPELAAEVIVFALLGF 264 Score = 60.1 bits (144), Expect = 4e-07 Identities = 69/254 (27%), Positives = 101/254 (39%), Gaps = 5/254 (1%) Frame = +2 Query: 875684 IFFHHGWPLSADDWDAQMLFFLAQGYRVIAHDRRGHGRSSQVWDGHDMDHYADDVAAVVN 875863 + F HG +SA ++ ++ +G+ V A D HGR+ + GH ++ ++ Sbjct: 27 LVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDSLPFGHTVEEMTRVTLRALD 86 Query: 875864 HLGVQGAVHVGHSTGGGEVIHYVARHSEERVAKAVLISAVPPLMVKTDSNPGGLPKAVFD 876043 LG+ AV VGHS GGG V R+ ERV A+L+ A + + D Sbjct: 87 ALGIDQAVFVGHSMGGGMVAEIAPRY-PERVLAAILLDAAAGKEHHAN---------LKD 136 Query: 876044 DLQAQLAANRAQFYYDVPAGPFYGYNRDGAKPSQGVIWNWWRQGMMG--SAKAHYDGIVA 876217 L+A + A DV + A G+ R G +A Y ++ Sbjct: 137 PLRATQRLSGA--VVDVLGDTYQAIKLRSATEGLGLA-QTLRSSFAGFRFVRAAY-ALLK 192 Query: 876218 FSQTDFTEDLKGTTIPVLVMHGDDDQIVPYADSGLLSAKLARNSTLKTYAGFPHGM---P 876388 + +K + V+HG DQIVP+A SA A L GF M P Sbjct: 193 ADTEPLLKAMKALDVQTAVIHGLSDQIVPFAAG--KSAAEASGGALYAVEGFHSWMLADP 250 Query: 876389 TSNAETINADLLAF 876430 AE I LL F Sbjct: 251 ELAAEVIVFALLGF 264 Score = 53.9 bits (128), Expect = 3e-05 Identities = 37/121 (30%), Positives = 61/121 (50%) Frame = +2 Query: 170171 GEPLLLIAGMTLQLTFWPPALIDALIQCGYRVIVFDNRDVGRSSRIPRPGPSVLRQFLRW 170350 G PL+ + G+T+ + LI+ L Q G+ V D + GR+ +P Sbjct: 24 GVPLVFLHGLTVSALAYEELLIE-LAQRGFAVTALDAVNHGRTDSLPF------------ 70 Query: 170351 PVKDGYDLEDMAQDTIGLLDSLQLKRAHVVGMSMGGMIGQVLAARYPQRVLSLTSIISTT 170530 G+ +E+M + T+ LD+L + +A VG SMGG + +A RYP+RVL+ + + Sbjct: 71 ----GHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDAAA 126 Query: 170531 G 170533 G Sbjct: 127 G 127 Score = 47.8 bits (112), Expect = 0.002 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 1/138 (0%) Frame = -1 Query: 801839 GTGFPVLLGHSYLWDSAMWAPQIDALSRR-YRVIVPDLWGHGASGALPEGTQTXXXXXXX 801663 GTG P++ H + + + L++R + V D HG + +LP G T Sbjct: 22 GTGVPLVFLHGLTVSALAYEELLIELAQRGFAVTALDAVNHGRTDSLPFG-HTVEEMTRV 80 Query: 801662 XXXXXXXLEIEQCALVGLSVGGMWGARLALREPQRVRALVLMDASLEAEPEATRLRYFGM 801483 L I+Q VG S+GG A +A R P+RV A +L+DA+ E A + Sbjct: 81 TLRALDALGIDQAVFVGHSMGGGMVAEIAPRYPERVLAAILLDAAAGKEHHA------NL 134 Query: 801482 LDAIAAAGRIAPPLLDAI 801429 D + A R++ ++D + Sbjct: 135 KDPLRATQRLSGAVVDVL 152 Score = 47.4 bits (111), Expect = 0.003 Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 21/184 (11%) Frame = +2 Query: 744659 MKNSILVTSGRAALATEVVGSGDPIVFLHARVADRRMWGHQMRETGATLQAIAYD----- 744823 +K+ +V + VG+G P+VFLH G T+ A+AY+ Sbjct: 3 LKHKTIVLDDGFRVGVSQVGTGVPLVFLH----------------GLTVSALAYEELLIE 46 Query: 744824 --RRGFGETTAEAESHS---------SVEDLIAVIKSVSNGA---PAILVACSQGGGIAL 744961 +RGF T +A +H +VE++ V + A+ V S GGG+ Sbjct: 47 LAQRGFAVTALDAVNHGRTDSLPFGHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVA 106 Query: 744962 DAALRYPSHVRALVLVAPNVTGAPKMVHAPQVDDLIA--RLADAEASSHFEEAIAIRTRL 745135 + A RYP V A +L+ A K HA D L A RL+ A + AI+ R Sbjct: 107 EIAPRYPERVLAAILLD---AAAGKEHHANLKDPLRATQRLSGAVVDVLGDTYQAIKLRS 163 Query: 745136 WLDG 745147 +G Sbjct: 164 ATEG 167 Score = 47.0 bits (110), Expect = 0.004 Identities = 58/219 (26%), Positives = 84/219 (38%), Gaps = 22/219 (10%) Frame = -3 Query: 941376 LLAAGYRAIVIDSRGHGRSTRDDQPYSYERMASDVLAVLDALHVDRARFVGWSDGACIAL 941197 L G+ +D+ HGR+ ++ E M L LDAL +D+A FVG S G + Sbjct: 47 LAQRGFAVTALDAVNHGRTDSLPFGHTVEEMTRVTLRALDALGIDQAVFVGHSMGGGMVA 106 Query: 941196 VLADRAPER---------AAGVFFFACNMDP-------SGTKEIVPGPLLDRCFARHRKD 941065 +A R PER AAG A DP SG V G R + Sbjct: 107 EIAPRYPERVLAAILLDAAAGKEHHANLKDPLRATQRLSGAVVDVLGDTYQAIKLRSATE 166 Query: 941064 YAALSATPDQFDA---FVAAVSEMMRTQPDYRAQDLAAIAVPVTIVLGEHDEFIRPEHAA 940894 L+ T A FV A +++ + + + A+ V ++ G D+ + P A Sbjct: 167 GLGLAQTLRSSFAGFRFVRAAYALLKADTEPLLKAMKALDVQTAVIHGLSDQIV-PFAAG 225 Query: 940893 YLARTIPGATLTTLPGVSHFA---PLQRPERFNAAMLGF 940786 A G L + G + P E A+LGF Sbjct: 226 KSAAEASGGALYAVEGFHSWMLADPELAAEVIVFALLGF 264 >ref|NP_818239.1|gp188 Length = 318 Score = 75.1 bits (183), Expect = 1e-11 Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 2/149 (1%) Frame = -2 Query: 956536 DICDRHGVLLVADEVICGFGRLGEYFGSARYGLKPDIITFAKGIASGYVPLGGVIASDTV 956357 D + G +VADE GFGRLG +G YG PD I F G A G + LGGVI + Sbjct: 130 DRATKSGRTVVADESATGFGRLGRIWGHQAYGFTPDAIIFG-GPAGGGLTLGGVIGPAEL 188 Query: 956356 VDTVLNGPQQMFLHGATYGGHPVACTAALANLAIMEREGVLENVRSNEAVFRQTLDGLLE 956177 +D GP G P+AC A LA + E +LE+VR F + L L++ Sbjct: 189 LDDAFVGPM---------AGAPLACATGAATLAAINPE-LLEHVREEGVTFGERLRALVD 238 Query: 956176 L--PCVGDVRGDGYHYSLELVTDKAARRW 956096 + D G G +++L+ + + AR++ Sbjct: 239 RFGDYLADTAGSGLYHTLDFRSPQLARKF 267 Score = 40.8 bits (94), Expect = 0.27 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 18/123 (14%) Frame = +3 Query: 1332072 PEAFGKQAALSLERKILEIGADRVAAFVAEPFQGAGGMIFPPDGYWQEIERICRQYDVL- 1332248 P + ++ SLER AD + AE + AG + F W + I R+ ++ Sbjct: 66 PVEYARKLIDSLERP----DADSLRVLYAEGGRDAGAVAFTQFPNWSLVSLIDREGRLVA 121 Query: 1332249 -----------------LCADEVIGGFGRTGEWFAHRHFGFEPDLICVAKGLTSGYVPMG 1332377 + ADE GFGR G + H+ +GF PD I + G G + +G Sbjct: 122 PEVVLDEVDRATKSGRTVVADESATGFGRLGRIWGHQAYGFTPDAI-IFGGPAGGGLTLG 180 Query: 1332378 GLI 1332386 G+I Sbjct: 181 GVI 183 >ref|NP_046877.1|putative non-heme haloperoxidase Length = 278 Score = 73.9 bits (180), Expect = 3e-11 Identities = 70/253 (27%), Positives = 107/253 (42%), Gaps = 2/253 (0%) Frame = +2 Query: 257585 PIMFHHGWPLSGDDWDAQMLFFVQKGYRVVAHDRRGHGRSAQVSDGHDMDHYAADAFAVV 257764 P++F HG +S ++ + + G+RV+A D HGRS + GH ++ + Sbjct: 24 PLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHTVEDMTRVTLKTL 83 Query: 257765 EALDLRNAVHIGHSTGGGEVARYVAKHGEPAGRVAKAVLVSAVPPLMLKTASNPEGLPLE 257944 + LD+ A+ GHS GGG V A+H RVA AVL+ A + + + + Sbjct: 84 DELDIHRAIFAGHSMGGGMVVEIAARHPH---RVAAAVLLDAA-----AGQEHHDNIKVG 135 Query: 257945 VFDGFRKALADNRAQFFLDVPSGPFYGFNREGATVHQGVIRNWWRQGMEG--SAKAHYEG 258118 + A + D+ G Y T + R + G +A + Sbjct: 136 HYATLAFRAAKKLGEAVTDI-VGDGYEAMHLRDTGEKLSFLGMLRDSVSGLRFVRAAFAL 194 Query: 258119 IKAFSETDQTEDLKSISVPTLVLHGEDDQIVPIADAALKSIKLLKNGTLKTYPGYSHGML 258298 +KA T + VPT VLHG DQIVP +A L + K + N + G+ ML Sbjct: 195 MKA-DTTPLLHAMYRHGVPTAVLHGLHDQIVPY-EAGLSTAK-ITNASFYGVDGFHSWML 251 Query: 258299 TVNADVLNADLLA 258337 L ADL+A Sbjct: 252 A--DPELAADLIA 262 Score = 72.8 bits (177), Expect = 7e-11 Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 10/258 (3%) Frame = +2 Query: 875684 IFFHHGWPLSADDWDAQMLFFLAQGYRVIAHDRRGHGRSSQVWDGHDMDHYADDVAAVVN 875863 + F HG +SA ++ + G+RVIA D HGRS + GH ++ ++ Sbjct: 25 LVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTGHTVEDMTRVTLKTLD 84 Query: 875864 HLGVQGAVHVGHSTGGGEVIHYVARHSEERVAKAVLISAVPPLMVKTDSNPGGLPKAVFD 876043 L + A+ GHS GGG V+ ARH RVA AVL+ A + + + Sbjct: 85 ELDIHRAIFAGHSMGGGMVVEIAARH-PHRVAAAVLLDA-----AAGQEHHDNIKVGHYA 138 Query: 876044 DLQAQLAANRAQFYYDVPAGPFYGYN-RDGAKPSQGVIWNWWRQGMMGSAKAHYDGI--- 876211 L + A + D+ + + RD + + +G + G+ Sbjct: 139 TLAFRAAKKLGEAVTDIVGDGYEAMHLRDTGE----------KLSFLGMLRDSVSGLRFV 188 Query: 876212 ---VAFSQTDFTEDLKGT---TIPVLVMHGDDDQIVPYADSGLLSAKLARNSTLKTYAGF 876373 A + D T L +P V+HG DQIVPY ++GL +AK+ N++ GF Sbjct: 189 RAAFALMKADTTPLLHAMYRHGVPTAVLHGLHDQIVPY-EAGLSTAKIT-NASFYGVDGF 246 Query: 876374 PHGMPTSNAETINADLLA 876427 H ++ E + ADL+A Sbjct: 247 -HSWMLADPE-LAADLIA 262 Score = 55.1 bits (131), Expect = 1e-05 Identities = 36/121 (29%), Positives = 59/121 (48%) Frame = +2 Query: 170171 GEPLLLIAGMTLQLTFWPPALIDALIQCGYRVIVFDNRDVGRSSRIPRPGPSVLRQFLRW 170350 G PL+ + G+++ + ++ L + G+RVI D + GRS +P Sbjct: 22 GAPLVFLHGLSVSAKAYEE-MLTRLAEHGFRVIALDAANHGRSGSLPT------------ 68 Query: 170351 PVKDGYDLEDMAQDTIGLLDSLQLKRAHVVGMSMGGMIGQVLAARYPQRVLSLTSIISTT 170530 G+ +EDM + T+ LD L + RA G SMGG + +AAR+P RV + + + Sbjct: 69 ----GHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAA 124 Query: 170531 G 170533 G Sbjct: 125 G 125 Score = 49.7 bits (117), Expect = 6e-04 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%) Frame = -1 Query: 801839 GTGFPVLLGHSYLWDSAMWAPQIDALSRR-YRVIVPDLWGHGASGALPEGTQTXXXXXXX 801663 GTG P++ H + + + L+ +RVI D HG SG+LP G T Sbjct: 20 GTGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLPTG-HTVEDMTRV 78 Query: 801662 XXXXXXXLEIEQCALVGLSVGGMWGARLALREPQRVRALVLMDASLEAE-PEATRLRYFG 801486 L+I + G S+GG +A R P RV A VL+DA+ E + ++ ++ Sbjct: 79 TLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLDAAAGQEHHDNIKVGHYA 138 Query: 801485 MLDAIAAAGRIAPPLLDAI 801429 L A AA ++ + D + Sbjct: 139 TL-AFRAAKKLGEAVTDIV 156 Score = 48.1 bits (113), Expect = 0.002 Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = +3 Query: 687930 DGIQLAGSAWGDPTGTPVILLHGSGQTRHAWTGMARSLGEAGFHAIAFDARGHGDSSWSP 688109 DG ++ S G TG P++ LHG + A+ M L E GF IA DA HG S P Sbjct: 10 DGFRVGVSTVG--TGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSLP 67 Query: 688110 TANYSQGAMIRDLERV-VATLD 688172 T G + D+ RV + TLD Sbjct: 68 T-----GHTVEDMTRVTLKTLD 84 Score = 45.4 bits (106), Expect = 0.011 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 4/121 (3%) Frame = +2 Query: 744659 MKNSILVTSGRAALATEVVGSGDPIVFLHARVADRRMWGHQM-RETGATLQAIAYDRRGF 744835 MK+ +V + + VG+G P+VFLH + + + R + IA D Sbjct: 1 MKHETIVLADGFRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANH 60 Query: 744836 GETTAEAESHSSVEDLIAVIKSVSNGAP---AILVACSQGGGIALDAALRYPSHVRALVL 745006 G + + H+ VED+ V + AI S GGG+ ++ A R+P V A VL Sbjct: 61 GRSGSLPTGHT-VEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVL 119 Query: 745007 V 745009 + Sbjct: 120 L 120 Score = 45.1 bits (105), Expect = 0.015 Identities = 36/116 (31%), Positives = 50/116 (43%) Frame = +2 Query: 690044 ADGVRLAGDTWGHPDAPPVVLLHGGGQTRHAWGGTGERLADAGYFALAYDARGHGDSDWS 690223 ADG R+ T G P+V LHG + A+ RLA+ G+ +A DA HG S Sbjct: 9 ADGFRVGVSTVG--TGAPLVFLHGLSVSAKAYEEMLTRLAEHGFRVIALDAANHGRSGSL 66 Query: 690224 ADGDYDQDAFVRDLRQIVATLGGRRPALIGASLGGGTSLVAIGEHQVDARALILVD 690391 G +D R + + L R G S+GGG + H A +L+D Sbjct: 67 PTGHTVED-MTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAARHPHRVAAAVLLD 121 Score = 44.7 bits (104), Expect = 0.019 Identities = 25/67 (37%), Positives = 34/67 (50%) Frame = -3 Query: 941364 GYRAIVIDSRGHGRSTRDDQPYSYERMASDVLAVLDALHVDRARFVGWSDGACIALVLAD 941185 G+R I +D+ HGRS ++ E M L LD L + RA F G S G + + +A Sbjct: 49 GFRVIALDAANHGRSGSLPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGGGMVVEIAA 108 Query: 941184 RAPERAA 941164 R P R A Sbjct: 109 RHPHRVA 115 >ref|NP_040655.1|unknown protein Length = 430 Score = 73.2 bits (178), Expect = 5e-11 Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 4/238 (1%) Frame = -2 Query: 573478 QQVMLEVKVAEVSKTLINQMGSALNIQGGFGSWSGALVSNLLAGVATGIAFSKANNKPFN 573299 +QV +E V E S ++G G+WS +L + I F +N Sbjct: 186 RQVAIEANVVEASVDWSKRLGLNWGGALSLGNWSAVTAGDLSVAAGSSIGFGFLSN---T 242 Query: 573298 LAAD----AQNTDNLVKILAEPNLVTISGQEATFLAGGKIFIPIPQSSGNGTSSITLQEE 573131 L+ D A + ++++ P L+T+ Q A+ L G ++ P QS+G+G +S+ + Sbjct: 243 LSLDGLFTAMENEGNGRVVSRPTLLTLDRQSASVLRGTEL--PYQQSAGDGATSVAFKHA 300 Query: 573130 EFGVALKFTPTVLSNGRISLKVAPEVSELSQTGVTLSATNIGGTSILPLITTRRASTTVQ 572951 + +K P + + I ++V +S+ S G +P I T R TT++ Sbjct: 301 ALSLEVK--PVISPDNSIVIEVL-----VSRDSPNFSNAIDG----VPPIDTNRLVTTIR 349 Query: 572950 MGDGETFAIGGLIKDNGTGALKALPGVGEIPVLGALLRSTSFQQDRTELIFVITPHLV 572777 + G+T +GG+ + G+ IP +G L + ++ EL+ +TP ++ Sbjct: 350 VPHGQTVVLGGVYSTINQQGSSRVSGISRIPGIGRLFKKKEHVTEQYELLIFLTPRIL 407 >ref|NP_818403.1|gp105 Length = 266 Score = 69.7 bits (169), Expect = 6e-10 Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 5/224 (2%) Frame = -3 Query: 1097835 PVFMFIHGGGWVLGDFPTHERLVRDLVVQSGAVAVFVNYTPSPEAHYPVAINQAYAATKW 1097656 PVFMFI GG W +GD + +VQ G + V ++Y +P+ H+P AA W Sbjct: 39 PVFMFIPGGAWTIGDRRGQGYAIMSHLVQQGWICVAIDYRTAPKNHWPAPFEDVSAAFHW 98 Query: 1097655 VAAHGAEIGVDGSRLAVVGNSVGGNMAAVVALMAKDKGGPAIRFQGLMWPVTDHNFNTGS 1097476 V A+ + G G LAV G S GG+MA+++ L W + + Sbjct: 99 VRANIHQYG-GGDFLAVGGASAGGHMASLLGLTD--------------WSFSKPDAVVSL 143 Query: 1097475 YNAYQQGHFLTRPMMKWFWDAYTKN-EAQRNEIYASPLRASTAQL-KGLPPALIQVAQFD 1097302 Y Y + ++ + W + Y ++ R + + + Q+ + PP LI D Sbjct: 144 YGVYD---WTSKSLDHWLINRYVQHVVVGRRDHDTLRISSPIHQIHRDAPPFLIIQGDCD 200 Query: 1097301 VLRDEGEA--YGRKLDAAGVD-ATTTRYDGTIHDFGLLNALAMD 1097179 ++ + A + +KL ++ A R G IH F LL D Sbjct: 201 LVTPQSGAKKFFKKLKETSLNHAVYHRVPGGIHGFDLLQGWQTD 244 Score = 64.7 bits (156), Expect = 2e-08 Identities = 35/112 (31%), Positives = 60/112 (53%) Frame = -2 Query: 1084501 QRLDVFVQHATRQGAPADVVLFVHGGAFVRGRKSINGLIYDNVPRWFARHGYVAINVEYR 1084322 Q+LD+++ + A V +F+ GGA+ G + G + + G++ + ++YR Sbjct: 25 QKLDIWLPESPEN---APVFMFIPGGAWTIGDRRGQGYA---IMSHLVQQGWICVAIDYR 78 Query: 1084321 LAPDAPYPAGAQDLAAALEWTRAQVASYGGHPGRIFIVGHSAGGAHVATYLG 1084166 AP +PA +D++AA W RA + YGG G VG ++ G H+A+ LG Sbjct: 79 TAPKNHWPAPFEDVSAAFHWVRANIHQYGG--GDFLAVGGASAGGHMASLLG 128 Score = 62.0 bits (149), Expect = 1e-07 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 2/196 (1%) Frame = +1 Query: 81616 DVPVAGGSIRVRLYRPPAGASADGNPLVVFIHGGGWVIGSVDTHD-GICRHLARHGGCAV 81792 D G+ ++ ++ P + +A P+ +FI GG W IG I HL + G V Sbjct: 17 DTVAYSGNQKLDIWLPESPENA---PVFMFIPGGAWTIGDRRGQGYAIMSHLVQQGWICV 73 Query: 81793 ASVEYRLSPEHRWPVPLEDCEQALDYLTANAAALSINASRVILAGDSAGGNMATLIA-NA 81969 A ++YR +P++ WP P ED A ++ AN + + G SAGG+MA+L+ Sbjct: 74 A-IDYRTAPKNHWPAPFEDVSAAFHWVRANIHQYG-GGDFLAVGGASAGGHMASLLGLTD 131 Query: 81970 ASVAGPAIIGQVLFYPVTDLTASLPSYRRIQGGFPLVAESMLWFREHYVPDGTPFDLPRL 82149 S + P + V Y V D T+ + I + +H V D R+ Sbjct: 132 WSFSKPDAV--VSLYGVYDWTSKSLDHWLINR-----------YVQHVVVGRRDHDTLRI 178 Query: 82150 SPLLHAEGRRQPPMFM 82197 S +H R PP + Sbjct: 179 SSPIHQIHRDAPPFLI 194 Score = 61.6 bits (148), Expect = 2e-07 Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 5/229 (2%) Frame = +1 Query: 84457 TGSLRARLYRPTQERNLPTVVYLHGGGFVIGDLDTHDNICRELARGANAVVVSVDYRLAP 84636 +G+ + ++ P N P +++ GG + IGD + V++DYR AP Sbjct: 22 SGNQKLDIWLPESPENAPVFMFIPGGAWTIGDRRGQGYAIMSHLVQQGWICVAIDYRTAP 81 Query: 84637 EHPYPXXXXXXXXXTKWVIANAGELGGSDVVAVAGDSAGGNLAAV--VTQQLHADGISLS 84810 ++ +P WV AN + GG D +AV G SAGG++A++ +T + ++ Sbjct: 82 KNHWPAPFEDVSAAFHWVRANIHQYGGGDFLAVGGASAGGHMASLLGLTDWSFSKPDAVV 141 Query: 84811 AQFLIYPAVAQDRAGFPSFKENGEGYFLDLETIAWFERHYVLDGTDREDPRLAPIRAKDL 84990 + + +Y ++ LD I + +H V+ D + R++ + Sbjct: 142 SLYGVYDWTSKS---------------LDHWLINRYVQHVVVGRRDHDTLRISSPIHQIH 186 Query: 84991 AGLPPAVILTAEFDPLRDEGEA---YGRLLHASGVKVDTIRCDGMIHGF 85128 PP +I+ + D + + A + +L S R G IHGF Sbjct: 187 RDAPPFLIIQGDCDLVTPQSGAKKFFKKLKETSLNHAVYHRVPGGIHGF 235 >ref|NP_047372.1|putative maturation protein Length = 500 Score = 68.2 bits (165), Expect = 2e-09 Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 2/231 (0%) Frame = -2 Query: 573478 QQVMLEVKVAEVSKTLINQMGSALNIQGGFGSWSGALVSNLLAGVATGIAFSKANNKPFN 573299 +Q+ +E + E +++G +N+Q F V+NL+ + FN Sbjct: 223 RQIFIEAVITETELGDNSELG--VNLQAAFDK--AGFVTNLVNASKLKDNLFIFESGDFN 278 Query: 573298 LAADAQNTDNLVKILAEPNLVTISGQEATFLAGGKI-FIPIPQSSGNGTSSITLQEEEFG 573122 A + + ++L+ PN++ + + G + F+ ++ GTS ++ ++ G Sbjct: 279 ALVKAISGSSDTRLLSRPNILIMDRERGYITVGQNVPFLVSNSTTDGGTSVQRIERKDVG 338 Query: 573121 VALKFTPTVLSNGRISLKVAPEVSELSQTGVTLSATNIGGTSILPLITTRRA-STTVQMG 572945 V+L+ TP V+ + I L + E S S T T++A +IT +R TTV + Sbjct: 339 VSLEVTPHVMGDDVI-LVINQESS--SVTDSTIAAD---------IITNKRTLMTTVAVK 386 Query: 572944 DGETFAIGGLIKDNGTGALKALPGVGEIPVLGALLRSTSFQQDRTELIFVI 572792 G+T +GGLI D +P + + P++G L RSTS + + EL VI Sbjct: 387 SGQTIVLGGLISDEKRNVESGVPVLKDTPLIGGLFRSTSTKNVQKELRVVI 437 >ref|YP_195210.1|virion structural protein Length = 1177 Score = 65.9 bits (159), Expect = 8e-09 Identities = 84/332 (25%), Positives = 145/332 (43%), Gaps = 7/332 (2%) Frame = +2 Query: 1258130 DGSINYNSVTLNPGGSLTTMTNLAAGDISQNSKDAVNGSQLYQTNQTVSTLGNNAASVIG 1258309 DG + +L+ GS+ AGD+ +V S +N +S N +++ Sbjct: 35 DGDVGLEGQSLHSNGSVVEWR--FAGDVFLTGIQSV--SDKIFSNCNISGTENALSNI-- 88 Query: 1258310 GGASYDPSTGQMTGPTFSIAGG---KQTNLSDAINALNQGWNVT-TGGNTSGASVTAVQP 1258477 G S + S+ + G + + G TN + + A++ +V T TSG S T+ Sbjct: 89 GNDSLENSSITINGTSIPLGGSVTTADTNTTYSFAAVDGTTDVRKTIRLTSGGSGTSTD- 147 Query: 1258478 GSTVTFNGGKNIALAQNGADITIATS--DTPTFTSVGIDNGGPTLSGSGLNMAGKKITNV 1258651 VT G N++L + G DI I++S DT T T++ GG SG +++AG T V Sbjct: 148 -QDVTLVAGTNVSLTRAGNDIQISSSFTDTDTITTLRSAVGGNATSGD-ISIAGSGSTTV 205 Query: 1258652 ATGDVSSSSKDAVNGSQLYQTNQTVSTLGNNAASVIGGGASYDPSTGQMTGPTFSIAGGK 1258831 + +V+G + T+ + + + + GG + G F++ G Sbjct: 206 S---------QSVDGLTI-----TIDSTDTDTITRLRGGTGENFLAGD-----FTLIAGD 246 Query: 1258832 QTNLSDAINALNQGWNVTTGGNTSGASVTAVQPGS-TVTFNGGKNIALAQNGADITIATS 1259008 + LS + +V T G + + + G T T +G ++ +Q+G+ ITI + Sbjct: 247 EVTLSQTGRDITIN-SVDTITRLKGGATGSFKSGDVTFTGSGATTVSQSQDGSTITIDSI 305 Query: 1259009 DTPTFTSVGIDNGGPTLSGSGLNMAGKKITNV 1259104 DT T T + NGG TL+ + G +T V Sbjct: 306 DTNTITRIRGSNGG-TLTSGDVTFLGSGVTTV 336 Score = 56.6 bits (135), Expect = 5e-06 Identities = 100/454 (22%), Positives = 165/454 (36%), Gaps = 76/454 (16%) Frame = +2 Query: 1257896 APDDSVALGSNSVGESNAQGPAAFSGDAIPVNGAVSVGQ--------AGAERQIKNVAGG 1258051 A D V L S+ + + F+GD + G SV +G E + N+ Sbjct: 33 ALDGDVGLEGQSLHSNGSVVEWRFAGDVF-LTGIQSVSDKIFSNCNISGTENALSNIGND 91 Query: 1258052 TVGTDAVNVNQLTA-VSNSAVKYDKNP-------DGSINYN-SVTLNPGGSLTT----MT 1258192 ++ ++ +N + + S D N DG+ + ++ L GGS T+ +T Sbjct: 92 SLENSSITINGTSIPLGGSVTTADTNTTYSFAAVDGTTDVRKTIRLTSGGSGTSTDQDVT 151 Query: 1258193 NLAAGDIS-QNSKDAVNGSQLYQTNQTVSTLGNNAASVIGGGASYDPSTGQMTGPTFSIA 1258369 +A ++S + + + S + T++TL S +GG A T SIA Sbjct: 152 LVAGTNVSLTRAGNDIQISSSFTDTDTITTL----RSAVGGNA---------TSGDISIA 198 Query: 1258370 GGKQTNLSDAINALN-----------------QGWNVTTGGNT--SGASVTAVQPGSTVT 1258492 G T +S +++ L G N G T +G VT Q G +T Sbjct: 199 GSGSTTVSQSVDGLTITIDSTDTDTITRLRGGTGENFLAGDFTLIAGDEVTLSQTGRDIT 258 Query: 1258493 FN--------------------------GGKNIALAQNGADITIATSDTPTFTSVGIDNG 1258594 N G ++ +Q+G+ ITI + DT T T + NG Sbjct: 259 INSVDTITRLKGGATGSFKSGDVTFTGSGATTVSQSQDGSTITIDSIDTNTITRIRGSNG 318 Query: 1258595 GPTLSGSGLNMAGKKITNV------ATGDVSSSSKDAVNGSQL---YQTNQTVSTLGNNA 1258747 G TL+ + G +T V T +SS+ +D + L + T +L NN Sbjct: 319 G-TLTSGDVTFLGSGVTTVEQSPDGRTITISSTDQDTTYDAALSGGLFLSGTSFSLKNNE 377 Query: 1258748 ASVIGGGASYDPSTGQMTGPTFSIAGGKQTNLSDAINALNQGWNVTTGGNTSGASVTAVQ 1258927 +D S Q+T + G T D + TG T+ + V Sbjct: 378 NINDQTIVKWDSSNFQLTNSIITDDGSTVTIGGDLL---------VTGTTTTINTQNLVV 428 Query: 1258928 PGSTVTFNGGKNIALAQNGADITIATSDTPTFTS 1259029 + + G+N+ + G + T T TS Sbjct: 429 ADNNIELRRGENLTGSNGGIQLNRTTDGTGLVTS 462 Score = 46.2 bits (108), Expect = 0.007 Identities = 105/456 (23%), Positives = 166/456 (36%), Gaps = 29/456 (6%) Frame = +2 Query: 1257638 IAIGRQSAATADFSTAIGNVAYASGVSGIAMGDSALASGYRSVAIGSADTNLAGNDGIST 1257817 I IGR A A +T +G A S +G + A GY S + ++T Sbjct: 689 IKIGRGGNAIAT-NTRVGYRALESNTTGA----NNTAFGYESSFV------------LNT 731 Query: 1257818 GANYDPNTQTRASGARTVALGAGAVAAPDDS----------VALGS---NSVGESNAQGP 1257958 G+N NT R+ +G G VA S V +G+ +SV ++N Sbjct: 732 GSN---NTSFGYQALRSSGIGEGNVAFGSQSCISVTEGVGNVGVGTLTLSSVTDTNYNVC 788 Query: 1257959 AA-FSGDAIPVNGAVSVGQAGAERQIKNVAGGTVGTDAVNVNQLTAVSNSAVKYDKNPDG 1258135 ++G A+ +G V +G A E + T NQL S + V G Sbjct: 789 IGHYAGAALTGSGNVLIGPASTEDSLSATYAPPAPTGN---NQLVIASGTGVWIR----G 841 Query: 1258136 SINYNSVTLNPGGSLTTMTNLA-AGDISQNSKDAVNGSQLYQTNQTVSTLGNNAASVIGG 1258312 +N V N ++T NL +GD++ N S++ + LG A G Sbjct: 842 DNGFNVVMPN---NVTIQKNLQISGDLTVNGTTTTVNSRVVTIDDKAIELGAVATINFVG 898 Query: 1258313 GASYDPSTGQMTGPTFSIAGGKQTNLSDAINALNQGWNVTT--------GGNTSGA---- 1258456 A+ + + T + G + + + L G +T+ GN G+ Sbjct: 899 NATLNSNVISNLPTTAGLIVGMEVQVLNVGITLPPGTIITSIGTDQIVLNGNIGGSGGTN 958 Query: 1258457 -SVTAVQPGSTVTFNGGKNIALAQNGADITIATSDTPTFTSVGIDNGGPTLSGSGLNMAG 1258633 + TA+ P T T NGG I I F + + P+ +N + Sbjct: 959 VTFTAIGPSDT-TANGGGIIVRGSTNKTILYDNDGILPFWKISDNVDIPSGKVFSINESS 1017 Query: 1258634 KKITNVATGDVSSSSKDAVNGSQLYQTNQTVSTLGNNAASVIGGGA-SYDPSTGQMTGPT 1258810 V +SS +V Q V+ G V+ S P + ++ Sbjct: 1018 VLSATTLGSSVVNSSLTSVGTLQSLSVTGNVNLKGRITEKVVNNFVTSITPVSNELE--- 1074 Query: 1258811 FSIAGGKQTNLSDAINALNQGWNVTTGGNTSGASVT 1258918 S A G + A +A+N WN T G T+G+S+T Sbjct: 1075 VSAANGNTIIGTLAASAINT-WNFTNLGLTNGSSIT 1109 >ref|NP_061653.1|transposase Length = 328 Score = 57.8 bits (138), Expect = 2e-06 Identities = 27/51 (52%), Positives = 35/51 (68%) Frame = -3 Query: 747357 RASNENTNGLLRQYFPKGADLSAYSQAKLNAVARRLNERPRKTLNFDTPAE 747205 R +NENTNGLLR++FPK DL+ +Q +LN +N RPRK LN+ P E Sbjct: 268 RGTNENTNGLLREFFPKKTDLAKVNQEQLNYALDSINYRPRKCLNWKFPYE 318 >ref|NP_795697.1|putative tail protein Length = 1460 Score = 56.6 bits (135), Expect = 5e-06 Identities = 80/350 (22%), Positives = 142/350 (40%), Gaps = 10/350 (2%) Frame = -3 Query: 536379 PVALHNVADGVATGDAVNVGQLGKATDTLNQSIT--------NVGNSVTTLGNQVTTNTG 536224 P AL V +G+ +G + Q+ + T ++ NVG T + NQ T+T Sbjct: 1010 PNALSGVWEGIKSGFSSMWDQITGKSSTSTAKVSADATVMAMNVGMQTTAIANQANTDTT 1069 Query: 536223 NIAALQQDALLWNTNLGAYDASHGGNGPQRIGNVAAGVADTDAVNVGQLTSTVAPLQTSI 536044 ++ +++ NT L +A+ N Q NV A + S + + ++ Sbjct: 1070 SML----NSISQNTELANINAT--SNATQMANNVNAQTGTMSLRGLNDSMSLASGISANM 1123 Query: 536043 STAASNITNLQGNVTSINTSLSTATTNISDLKAADARNVKYDGQSGFDSVTFAGTNGTT- 535867 S A N T Q + + +T++ N+ DA N SG + A + G T Sbjct: 1124 SVANINATT-QAREMASGVNGATSSMNL------DAINHTLSLASGVGANMGAASTGATS 1176 Query: 535866 -LHNVAAGVANTDAVNVGQLNGGLSSLSTSVTNNINTTLGSLSTSINNQIGNATKNAVQY 535690 +++GV+N+ A S LS SVT+ +++ S ++S+ N++ +A ++ Sbjct: 1177 QAQAMSSGVSNSLASMQSNSTKAASGLSNSVTSEMSSAATSATSSV-NRLSSAVESGF-- 1233 Query: 535689 DDDAHSGVTLGGKGAQSPVALHNVADGVATGDAVNVGQLGKATDTLNQSITNVSNSVTTL 535510 + A + T +++ +A+ V TG T QS+ N+ +SVT+ Sbjct: 1234 -NKAKTSAT---------TSMNGIANAVKTG-------FSSINSTAKQSMANLVSSVTSG 1276 Query: 535509 GNQVTTNTGNIAALQQDALQWNANLGTYDASHGGNGPQRIGNVAAGKNGT 535360 ++ T + N Q L L +S G Q N A GT Sbjct: 1277 MSRATAVSNNAC---QKILSIFRALAGQMSSAGAYAGQGFANGLASSAGT 1323 >ref|YP_006601.1|Gp21 Length = 3433 Score = 56.6 bits (135), Expect = 5e-06 Identities = 161/782 (20%), Positives = 300/782 (38%), Gaps = 107/782 (13%) Frame = -3 Query: 536358 ADGVATGDAVNVGQLGKATDTLNQSITNVGNSVTTLGNQVTTNTGNIAALQQDALLWNTN 536179 +D T +VN A +L ++T G +++T GN +T+ ++ AL + Sbjct: 2568 SDLSTTNASVNKKADATALQSLQNTVTQQGGTLSTQGNAITSLENSLNAL---------D 2618 Query: 536178 LGAYDASHGGNGPQRIGNVAA---------------GVADTDAVNVGQLTSTVAPLQTSI 536044 +G + G R GNV+A G A D +++ L++ V + + Sbjct: 2619 VGGTNQIPDSGGLARYGNVSAEKYNGNGVMAFTLKAGAAYRDLISIN-LSAPVDGTEYVL 2677 Query: 536043 S---TAASNITNLQGNVTSINTSLSTATTNISDLKAADARN------------VKYDGQS 535909 S AA+N ++ + S N++ + ++ + +D VK+ + Sbjct: 2678 SFYAKAAANGQKVRSHFYSPNSTKRSVSSQGNTFTNSDGLCDFTLTTEWQRYWVKWTQSA 2737 Query: 535908 GFDSVTFA------GTNGTTLH---------------------NVAAGVANTDAVNVGQL 535810 G S G+ T++ N +A + V Sbjct: 2738 GSGSKNLIVARINPGSTDQTVYLSSPKFERGNVPTAWSEAPEDNASAAAVSALTSRVDSA 2797 Query: 535809 NGGLSSLSTSVTNNINTTLGSLSTSINNQIGNATKNAVQYDDDAHSGVTLGGKGAQSPVA 535630 G L+S ++T +N+ L + + S+N + NA+ + G L +G QS + Sbjct: 2798 EGTLTSQGQAITK-LNSDLATTNASVNKKADATALNALTTRVSSAEG-KLESQG-QSITS 2854 Query: 535629 LHN-----------VADGVATGDAVN-VGQLGKATDTLNQSITNVSNSVTTLGNQVTTN- 535489 L N AD A N V Q+ T ++SIT++S S++TL NQV+ Sbjct: 2855 LQNGLTTANQNIGKKADSSAVNTLTNRVSQVENTLTTQSESITSLSGSISTLRNQVSNPW 2914 Query: 535488 -TGNI------------AALQQDALQWNANLG---TYDASHGGNGPQRIGNVAA-GKNGT 535360 G++ AA+ A ++N + +A++GGN ++IG ++ +N Sbjct: 2915 FDGSLESYADGQELYGSAAVVTTAQKFNGSRSLRLRREANNGGNSDKQIGPWSSIRENAV 2974 Query: 535359 DAVNVDQLNAAIQDGTSQLDALAVKYDDASKKQVSLGGGNGASPVRLTNVAEGNVAAGST 535180 ++ + + A Q +S + + Q + G + V +T G G Sbjct: 2975 YSIELWAMMPADQSPSSGWQTIV-----GIQGQNAAGQNSWQGAVTITESGLGE--RGKW 3027 Query: 535179 DAVNGAQLRRXXXXXXXXXXXXXXANPDGSITAPAYK--VGGGSFNNVGDALTNLDGRVG 535006 +G + R GS T P Y + ++ DA L+ Sbjct: 3028 VKFSG-KARMNGTGRTRGVVWISTRGATGSGT-PGYDLYIDDVVITDITDAQDALN-VAD 3084 Query: 535005 SNTTTLENHETRIGNAETNIAGNTAAIAGLQQDALQFDPKAGAYNAARGGAPTKLTNVAD 534826 ++TT + + TR+ NAE I + + L Q +L AGA N+ T A+ Sbjct: 3085 ASTTAVNSLTTRVTNAENKITAQSQQLTSL-QSSLNGKADAGALNSL-----TSRVTSAE 3138 Query: 534825 GNIAAGSTDAVNGGQLSGVKSSLEQQITQVSNQAGEAVKNVVKYDVDT-NGNRLNSVSLI 534649 GNI + + + G SS Q + ++ V+T NG ++ + ++ Sbjct: 3139 GNITSTANSLTSLNSTVGTLSSTVQAQGNTLVDTNNKISSMYSIKVETNNGKKVGAGIVL 3198 Query: 534648 G--GDTNAAVVLKNVAA--GTDDTDAVNVKQLKGVQSSLNQLGALAVQYDDSS-----KS 534496 G GDT+ ++ + + ++ AV V +G + ++ D+ +S Sbjct: 3199 GSDGDTSDMILYADRFSLFNRNNNTAVPVMIAEGNELYIDSARIKNGSIDNGKIGNVIQS 3258 Query: 534495 SITLGGAGGTRIT--------NVQAGALSATSTDAVNGSQLYATNQQVAKNTTDITNLQG 534340 + +GG+ G R+T NV S+ NG+ +YAT+ + T ++G Sbjct: 3259 NNYVGGSSGWRVTKDGGSEFNNVVVRGEIQASSGTFNGT-VYATDGRF-NGTVYAEKIEG 3316 Query: 534339 NV 534334 +V Sbjct: 3317 DV 3318 Score = 52.8 bits (125), Expect = 7e-05 Identities = 101/507 (19%), Positives = 181/507 (35%), Gaps = 17/507 (3%) Frame = -3 Query: 537123 TDAVNVQQLKNVNGTLSTSIATVDARVTSVGNSLSTTISNVDQRVTNVGNSLSTSIVTAT 536944 TD V++ N G+L+T + + + +TS G+S++ +++ NV + + Sbjct: 2152 TDRVDIDAAANAIGSLTTRVTSAEGSITSQGSSITKLTNDLATTNGNVNKKADAAALQTL 2211 Query: 536943 KNVVKYTDDSHAAIALDGSNGTTIXXXXXXXXXXXXXXXGQLKGT-VAPLQTSISTAASN 536767 +N V ++ S GT+I + + V L ++T + Sbjct: 2212 QNTVTQQGNTIT------SQGTSITSLDNKVTQAQKDINTKANASAVDSLSNRVTTTEKS 2265 Query: 536766 ITNLQTSVTGINTSLSTATTNISNLQAADARNVKYDGQSGFDSVTFAGTNGTTLHNVAAG 536587 I+ S+T + L+T N+S A N +S A + T N A Sbjct: 2266 ISAQSDSITKLANDLATTNGNVSKKAEQSALNSLTGRVEKTESGLSAANSSITSLNAAVR 2325 Query: 536586 VANTDAVNVGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQIGNATK--NAVQYDDDAHS 536413 N + ++ NA K + D A Sbjct: 2326 AGNASSGDL--IPNPTFDPAFGQLGLAVVSTTSDGVPSGCPFANAVKLTGRDHHPDMAAI 2383 Query: 536412 GVTLGGKGAQSPVALHNVADGVATGD-AVNVGQLGKATDTLNQSITNVGNSVTTLG---- 536248 TLG S + V+ G T D +G + NQ++ GN+ T Sbjct: 2384 PATLGDVFEMSAL----VSCGAGTADFNFYLGTTTSSNANTNQALFTGGNTKATAQWKRV 2439 Query: 536247 ------NQVTTNTGNIAALQQDALLWNTNLGAYDASHGGNGPQRIGNVAAGVADTDAVNV 536086 NQ N G I Q + Y + N+ A + DA + Sbjct: 2440 TWRFTVNQEMVNRGYIRPFLQISQSSPFGTVWYVTD------WHLRNITAAASAQDAADA 2493 Query: 536085 GQLTSTVAPLQTSISTAASNITNLQGNVTSINTSLSTATTNISDLKAADARNVKYDGQSG 535906 V L T+++ S +T++ T++ LST +++ K ADA V Q+ Sbjct: 2494 --TAKAVDSLTTTVNQQGSTLTSIGNRTTTLENGLSTTNADVN--KKADASTV----QTL 2545 Query: 535905 FDSVTFAGTNGTTLHNVAAGVANTDAVNVGQLNGGLSSLSTSVTNNIN-TTLGSLSTSIN 535729 ++VT G + T ++ + +L LS+ + SV + T L SL ++ Sbjct: 2546 QNTVTQQGKDLTATNSA-----------ITKLTSDLSTTNASVNKKADATALQSLQNTVT 2594 Query: 535728 NQIGNATK--NAVQYDDDAHSGVTLGG 535654 Q G + NA+ +++ + + +GG Sbjct: 2595 QQGGTLSTQGNAITSLENSLNALDVGG 2621 Score = 49.3 bits (116), Expect = 8e-04 Identities = 157/719 (21%), Positives = 272/719 (37%), Gaps = 73/719 (10%) Frame = -3 Query: 536358 ADGVATGDAVN-VGQLGKATDTLNQSITNVGNSVTTLGNQVTTN--TGNI---------- 536218 AD A N V Q+ T ++SIT++ S++TL NQV+ G++ Sbjct: 1660 ADSSAVNTLTNRVSQVENTLTTQSESITSLSGSISTLRNQVSNPWFDGSLESYADGQELY 1719 Query: 536217 --AALQQDALLWNTNLG---AYDASHGGNGPQRIGNVAAGVADTDAVNVGQLTSTVAPLQ 536053 AA+ A +N + +A++GGN ++IG ++ +AV +L + + P Sbjct: 1720 GSAAVVTTAQKFNGSRSLRLRREANNGGNSDKQIGPWSS--IRENAVYSIELWA-MMPED 1776 Query: 536052 TSISTAASNITNLQGNVTSINTSLSTATTNISDLKAADARNVKYDGQSGFD--------- 535900 S S+ +QG + S A T + VK+ G++ + Sbjct: 1777 QSPSSGWQTTVGIQGQNAAGQNSWQGAVTITESGLGERGKWVKFSGKARMNGAGRTRGVV 1836 Query: 535899 -----SVTFAGTNGTTLHNVAAGVAN----TDAVNVGQLN-GGLSSLSTSVTNNINT--T 535756 T +GT G L+ + + DA+NV + SL+T V+ NT + Sbjct: 1837 WISTRGATGSGTPGYDLYIDDVVITDITDAQDALNVADATASAVDSLTTKVSQQDNTISS 1896 Query: 535755 LGSLSTSINNQIGNATKNA-VQYDDDAHSGVTLGGKGAQSPVALHNVADGVATGDAVNVG 535579 +GS +T++ N G +T NA V DA + TL Q D A A+ Sbjct: 1897 IGSRTTALEN--GLSTTNADVSKKADASTVQTLQNTVTQQG------KDLTAANSAITKL 1948 Query: 535578 QLGKATDTLNQSITNVSNSVTTLGNQVTTNTGNIAALQQDALQWNANLGTYDASHGGNG- 535402 +T N S S ++ TL N VT ++++ Q + L +AS +G Sbjct: 1949 TSDLSTTNANVSKKADSTALQTLQNTVTQQGKDLSSQGASLTQLTSRLSESNASADADGK 2008 Query: 535401 -PQRIGNVAAGKNGTDAVNVDQLNAAIQDGTSQLDALAVKYDDASKKQVSLGGGNG---- 535237 P + A+ + GTD + A++ L Y+ +++ GG G Sbjct: 2009 IPGNLITNASFERGTDGFSGWSDRASVV-------TLQAPYNGTRAARLTAGGAVGIGQD 2061 Query: 535236 --------------ASPVRLTNVAEGNVA----AGSTDAVNGAQLRRXXXXXXXXXXXXX 535111 A T +A+GN A ST + G+ + Sbjct: 2062 VDFVKGRTYQIGVRAKQDSGTTIADGNRTKFRIADSTGLI-GSSVYGPFTSDWQEVKFTW 2120 Query: 535110 XANPD--GSITAPAYKVGGGSFNN---VGDALTNLDGRVGSNTTTLENHETRIGNAETNI 534946 A D ++ AY G + + V D +D + + + + TR+ +AE +I Sbjct: 2121 KAPKDVRAAVQFTAYLGAGAMYFDDFYVVDITDRVD--IDAAANAIGSLTTRVTSAEGSI 2178 Query: 534945 AGNTAAIAGLQQDALQFDPKAGAYNAARGGAPTKLTNVADGNIAAGSTDAVNGGQLSGVK 534766 ++I L D + N + L + + G+T G ++ + Sbjct: 2179 TSQGSSITKLTNDLATTNG-----NVNKKADAAALQTLQNTVTQQGNTITSQGTSITSLD 2233 Query: 534765 SSLEQQITQVSNQAGEAVKNVVKYDVDTNGNRLNSV-SLIGGDTNAAVVLKNVAAGTDDT 534589 + + Q ++ +A + VD+ NR+ + I +++ L N A T+ Sbjct: 2234 NKVTQAQKDINTKANASA-------VDSLSNRVTTTEKSISAQSDSITKLANDLATTNG- 2285 Query: 534588 DAVNVKQLKGVQSSLNQLGALAVQYD---DSSKSSITLGGAGGTRITNVQAGALSATST 534421 NV + K QS+LN L + + ++ SSIT A R N +G L T Sbjct: 2286 ---NVSK-KAEQSALNSLTGRVEKTESGLSAANSSITSLNA-AVRAGNASSGDLIPNPT 2339 Score = 45.1 bits (105), Expect = 0.015 Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 3/222 (1%) Frame = -3 Query: 536364 NVADGVATGDAVN-VGQLGKATDTLNQSITNVGNSVTTLGNQVTTNTGNIAALQQDALLW 536188 ++ D V A N +G L + SIT+ G+S+T L N + T GN+ A L Sbjct: 2150 DITDRVDIDAAANAIGSLTTRVTSAEGSITSQGSSITKLTNDLATTNGNVNKKADAAALQ 2209 Query: 536187 NTNLGAYDASHGGNGPQRIGNVAAGVADTDAVNVGQLTSTVAPLQTSISTA--ASNITNL 536014 N + GN + ++ L + V Q I+T AS + +L Sbjct: 2210 TLQ----------NTVTQQGNTIT----SQGTSITSLDNKVTQAQKDINTKANASAVDSL 2255 Query: 536013 QGNVTSINTSLSTATTNISDLKAADARNVKYDGQSGFDSVTFAGTNGTTLHNVAAGVANT 535834 VT+ S+S + +I+ L + A TNG N+ Sbjct: 2256 SNRVTTTEKSISAQSDSITKL-----------------ANDLATTNGNVSKKAEQSALNS 2298 Query: 535833 DAVNVGQLNGGLSSLSTSVTNNINTTLGSLSTSINNQIGNAT 535708 V + GLS+ ++S+T ++N + + + S + I N T Sbjct: 2299 LTGRVEKTESGLSAANSSIT-SLNAAVRAGNASSGDLIPNPT 2339 Score = 42.0 bits (97), Expect = 0.12 Identities = 113/558 (20%), Positives = 190/558 (34%), Gaps = 46/558 (8%) Frame = -3 Query: 536004 VTSINTSLSTATTNISDLKAADARNVKYDGQSGFDSVTFAGTNGTTLH-NVAAGVANTDA 535828 V IN + T +S K ++ D+ + A + T + A G + Sbjct: 1536 VARINPGSTDQTVYLSSPKFERGNVPTAWSEAPEDNASAAAVSALTSRVDSAEGTLTSQG 1595 Query: 535827 VNVGQLNGGLSSLSTSVTNNINTT-LGSLSTSINNQIGNATKNAVQYDDDAHSGVTLGGK 535651 + +LN L++ + SV + T L +L+T +++ G Q +G+T + Sbjct: 1596 QAITKLNSDLATTNASVNKKADATALNALTTRVSSAEGKLESQG-QSITSLQNGLTTANQ 1654 Query: 535650 GAQSPVALHNVADGVATGDAVN-VGQLGKATDTLNQSITNVSNSVTTLGNQVTTN--TGN 535480 + AD A N V Q+ T ++SIT++S S++TL NQV+ G+ Sbjct: 1655 N------IGKKADSSAVNTLTNRVSQVENTLTTQSESITSLSGSISTLRNQVSNPWFDGS 1708 Query: 535479 I------------AALQQDALQWNANLG---TYDASHGGNGPQRIG-------------- 535387 + AA+ A ++N + +A++GGN ++IG Sbjct: 1709 LESYADGQELYGSAAVVTTAQKFNGSRSLRLRREANNGGNSDKQIGPWSSIRENAVYSIE 1768 Query: 535386 -------NVAAGKNGTDAVNVDQLNAAIQDGTSQLDALAVKYDDASKKQVSLGGG---NG 535237 + + V + NAA Q+ + K V G NG Sbjct: 1769 LWAMMPEDQSPSSGWQTTVGIQGQNAAGQNSWQGAVTITESGLGERGKWVKFSGKARMNG 1828 Query: 535236 ASPVRLTNVAEGNVAAGSTDAVNGAQLRRXXXXXXXXXXXXXXANPDGSITAPAYKVGGG 535057 A R V ST G+ D A A Sbjct: 1829 AGRTR-------GVVWISTRGATGSGTPGYDLYIDDVVITDITDAQDALNVADATASAVD 1881 Query: 535056 SFNNVGDALTNLDGRVGSNTTTLENHETRIGNAETNIAGNTAAIAGLQQDALQFDPKAGA 534877 S N +GS TT LEN + NA+ + + + + LQ Q G Sbjct: 1882 SLTTKVSQQDNTISSIGSRTTALENGLSTT-NADVSKKADASTVQTLQNTVTQ----QGK 1936 Query: 534876 YNAARGGAPTKLTNVADGNIAAGSTDAVNGGQLSGVKSSLEQQITQVSNQAGEAVKNVVK 534697 A A TKLT+ N S+ Q + Q G+ Sbjct: 1937 DLTAANSAITKLTS---------DLSTTNANVSKKADSTALQTLQNTVTQQGK------- 1980 Query: 534696 YDVDTNGNRLNSVSLIGGDTNAAVVLKNVAAGTDDTDAVNVKQLKGVQSSLNQLGALAVQ 534517 D+ + G L ++ ++NA+ G T+A + G ++ + +Q Sbjct: 1981 -DLSSQGASLTQLTSRLSESNASADADGKIPGNLITNASFERGTDGFSGWSDRASVVTLQ 2039 Query: 534516 --YDDSSKSSITLGGAGG 534469 Y+ + + +T GGA G Sbjct: 2040 APYNGTRAARLTAGGAVG 2057 >ref|NP_040730.1|pre-neck appendage protein Length = 854 Score = 56.6 bits (135), Expect = 5e-06 Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 22/194 (11%) Frame = +1 Query: 922159 ELVDLPMSVRRFGVMGDGVTDDTAALQVALNAGIPLYFPPGTYLYSN--TLTATASIIGA 922332 EL +SV+ +G GDGVTDD A + A+ +G P+Y P GT++ S L + + GA Sbjct: 99 ELKQFGVSVKTYGAKGDGVTDDIKAFEKAIESGFPVYVPYGTFMVSRGIKLPSNTVLTGA 158 Query: 922333 G-WNSILQCTTSQGQNASIYWNN----------ASNFKIQ-NLQFYSKNAAGYYSSESAG 922476 G N++++ S G+ S+ +N S+F + N + + +G S + Sbjct: 159 GKRNAVIKFMDSVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESN 218 Query: 922477 PVNLESCSLFEISGCQVNNAASQAVMMRA-------CVNGKVFGNTLRNLWHDGFHVTGA 922635 +++ +C I + + + + +G N N+W + TG Sbjct: 219 -LSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGF 277 Query: 922636 SSD-ITITNNEVIN 922674 D IT +++ IN Sbjct: 278 GDDGITTHHSQYIN 291 >ref|NP_795486.1|hypothetical protein Length = 374 Score = 56.2 bits (134), Expect = 6e-06 Identities = 29/82 (35%), Positives = 45/82 (54%) Frame = -1 Query: 1061360 LLIRAGLAHLWFVTLHPFDDGNGRIARALGDLVLARADRSPQRFYSLSAQIQRERNAYYD 1061181 +L+R +AH F +HPF DGNGR+ R L L+ + + +S ++++ER YY+ Sbjct: 196 ILLRIAVAHAQFELIHPFLDGNGRLGRILIALMSVQEGLLKHPIFFVSEELEKERIRYYN 255 Query: 1061180 VLERTQRGSLDVTEWLAWFLTA 1061115 L T+ + D WL FL A Sbjct: 256 ALNATRGENPDWNLWLNLFLNA 277 >ref|NP_665964.1|putative plasmid partitioning protein Soj Length = 256 Score = 54.7 bits (130), Expect = 2e-05 Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 42/259 (16%) Frame = +1 Query: 1172644 KIAVSNQKGGTGKTTISVNIAAAFEAGGNKVALIDADPQGTSVRWV------TSGENTLP 1172805 +I V+NQKGG GKTT ++N+A A GN V +ID DPQG + + E Sbjct: 2 RIGVTNQKGGAGKTTTTLNVAGALNQLGNDVLVIDLDPQGHATEGLGFEDLYDDPERDSL 61 Query: 1172806 MTVL--------------------------SLAPAGRGIGGEIKKQ----------DANF 1172877 VL ++ A + +K++ D + Sbjct: 62 FDVLPELERMDELEQLVVEHQEVDCVPSHETMINAEDALANVMKREERLEMLLDDADGRW 121 Query: 1172878 DVIVVDCPGNLEDPRIASVLEVADFCLVPLSPSPADLYSTVAMIRMIESMRSVRNPNLSS 1173057 D ++VDCP NL +++ + L+P + + + + + S+ S P Sbjct: 122 DYVLVDCPPNLGVLTDNAIVATGN-VLIPAQAKSTSIRAIELLFKQLRSIESAFGPVDEL 180 Query: 1173058 ALMLNSVNGKTKMREEILKILRAEEIGEHLLDSQIAQREVYRQTFALGTTIHHHNRYLKG 1173237 AL+ N V + E + E E ++ +R ++ + G +I H Sbjct: 181 ALVANEVEVDGEADEMMAWFRDVFEDKEDCAVFEVRKRVALQRAWNNGVSIFEH------ 234 Query: 1173238 LKEARAEIEKLVTEMAQYI 1173294 E ++E + ++A+++ Sbjct: 235 --EEECDMESVYLDVARHL 251 Score = 40.4 bits (93), Expect = 0.36 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 10/178 (5%) Frame = -2 Query: 569203 KGGAGTSFAASNIAFEIAEGFKRRVLLIDLNQQFADAAFL----VSDETPPSTLPQLCAQ 569036 KGGAG + N+A + + VL+IDL+ Q L + D+ +L + + Sbjct: 9 KGGAGKTTTTLNVAGALNQ-LGNDVLVIDLDPQGHATEGLGFEDLYDDPERDSLFDVLPE 67 Query: 569035 IERLDSA---FLDASVAHVTENFHVLAGAGDPVKAAEMREDALEWILGVAAPRYDFVIFD 568865 +ER+D ++ + + A D + RE+ LE +L A R+D+V+ D Sbjct: 68 LERMDELEQLVVEHQEVDCVPSHETMINAEDALANVMKREERLEMLLDDADGRWDYVLVD 127 Query: 568864 VGVCINPLSMVALDRSDQIQLVLQPAMPHVRAGRRLLEILVSLGYS---TDQMRLIVN 568700 + L+ A+ + + + Q +RA L + L S+ + D++ L+ N Sbjct: 128 CPPNLGVLTDNAIVATGNVLIPAQAKSTSIRAIELLFKQLRSIESAFGPVDELALVAN 185 >ref|YP_024984.1|adenylosuccinate synthetase Length = 343 Score = 54.7 bits (130), Expect = 2e-05 Identities = 93/385 (24%), Positives = 149/385 (38%), Gaps = 21/385 (5%) Frame = +3 Query: 1179909 MPNV-VVVGAQWGDEGKGRVVDWLAAQADLVARYNGG-HNAGHTLV-VGGKTYKLALLPS 1180079 M NV +V+ Q+G GKG + +LA + N NAGHT + G+ + +LP+ Sbjct: 1 MKNVDLVIDLQFGSTGKGLIAGYLAEKNGYDTVINANMPNAGHTYINAEGRKWMHKVLPN 60 Query: 1180080 GVVRG--KRGVIGNGVALDPEALLAEIGRMAELGLSVTPDNLSIAENATLVLPIHRAIDQ 1180253 G+V KR ++G G L+ EI E+ + D ++I L+ P+ +D+ Sbjct: 61 GIVSPNLKRVMLGAGSVFSINRLMEEI----EMSKDLLHDKVAI-----LIHPMATVLDE 111 Query: 1180254 AQERLRREPIGTTLRGIGPAYEDKVGRRGLRVGDLAEPGRLAAKLDVLVDHHNAWFRGLG 1180433 + I T++ G G +AA ++ L Sbjct: 112 EAHKKAEVGIATSIGSTG-------------------QGSMAAMVEKL------------ 140 Query: 1180434 LDEYSRDAMLATLV--DLAP---RILPFVRPVWADLNDATDRGERILFEGSQAVMLDIDW 1180598 RD T+V D+A RI +V V + + A ERIL EG+Q L ++ Sbjct: 141 ----QRDPTNNTIVARDVAQYDGRIAQYVCTV-EEWDMALMASERILAEGAQGFSLSLNQ 195 Query: 1180599 GTYPFXXXXXXXXXXXXXXXXXXXXKLGHVLGVTKAYATRVGG--GPFLTELSDATGETL 1180772 YP+ L V+G + + RVGG G + + T E L Sbjct: 196 EFYPYCTSRDCTPARFLADMGIPLPMLNKVIGTARCHPIRVGGTSGGHYPDQEELTWEQL 255 Query: 1180773 RARGQEFGVNTGRPRRCGWLDAAQLRQAVRISGIDSLALTKLDVL------DGFESIELC 1180934 + E T + RR Q+++A+ D + L + L D IE+ Sbjct: 256 -GQVPELTTVTKKIRRVFSFSFIQMQKAMWTCQPDEVFLNFCNYLSPMGWQDIVHQIEVA 314 Query: 1180935 VGYEFDGARVDHL---PASLDAQSR 1181000 + A+V +L P LD + R Sbjct: 315 AQSRYCDAKVKYLGFGPTFLDVELR 339 >ref|YP_052989.1|Hypothetical protein Length = 343 Score = 54.7 bits (130), Expect = 2e-05 Identities = 93/385 (24%), Positives = 149/385 (38%), Gaps = 21/385 (5%) Frame = +3 Query: 1179909 MPNV-VVVGAQWGDEGKGRVVDWLAAQADLVARYNGG-HNAGHTLV-VGGKTYKLALLPS 1180079 M NV +V+ Q+G GKG + +LA + N NAGHT + G+ + +LP+ Sbjct: 1 MKNVDLVIDLQFGSTGKGLIAGYLAEKNGYDTVINANMPNAGHTYINAEGRKWMHKVLPN 60 Query: 1180080 GVVRG--KRGVIGNGVALDPEALLAEIGRMAELGLSVTPDNLSIAENATLVLPIHRAIDQ 1180253 G+V KR ++G G L+ EI E+ + D ++I L+ P+ +D+ Sbjct: 61 GIVSPNLKRVMLGAGSVFSINRLMEEI----EMSKDLLHDKVAI-----LIHPMATVLDE 111 Query: 1180254 AQERLRREPIGTTLRGIGPAYEDKVGRRGLRVGDLAEPGRLAAKLDVLVDHHNAWFRGLG 1180433 + I T++ G G +AA ++ L Sbjct: 112 EAHKKAEVGIATSIGSTG-------------------QGSMAAMVEKL------------ 140 Query: 1180434 LDEYSRDAMLATLV--DLAP---RILPFVRPVWADLNDATDRGERILFEGSQAVMLDIDW 1180598 RD T+V D+A RI +V V + + A ERIL EG+Q L ++ Sbjct: 141 ----QRDPTNNTIVARDVAQYDGRIAQYVCTV-EEWDMALMASERILAEGAQGFSLSLNQ 195 Query: 1180599 GTYPFXXXXXXXXXXXXXXXXXXXXKLGHVLGVTKAYATRVGG--GPFLTELSDATGETL 1180772 YP+ L V+G + + RVGG G + + T E L Sbjct: 196 EFYPYCTSRDCTPARFLADMGIPLPMLNKVIGTARCHPIRVGGTSGGHYPDQEELTWEQL 255 Query: 1180773 RARGQEFGVNTGRPRRCGWLDAAQLRQAVRISGIDSLALTKLDVL------DGFESIELC 1180934 + E T + RR Q+++A+ D + L + L D IE+ Sbjct: 256 -GQVPELTTVTKKIRRVFSFSFIQMQKAMWTCQPDEVFLNFCNYLSPMGWQDIVHQIEVA 314 Query: 1180935 VGYEFDGARVDHL---PASLDAQSR 1181000 + A+V +L P LD + R Sbjct: 315 AQSRYCDAKVKYLGFGPTFLDVELR 339 >ref|NP_536385.1|conserved hypothetical protein Length = 186 Score = 50.8 bits (120), Expect = 3e-04 Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Frame = +1 Query: 1042801 FIVLGDKHSHGGVVTSASGIAKIDGKGIARRNDTVTCPLHGVNY---IDEGDDTAIIESR 1042971 FI GD +HGG V + + G+ IA D VTCP G Y + + R Sbjct: 5 FICEGDTTTHGGRVVGCNVANTVHGRAIALLGDMVTCPRCGGIYPIVSVKRELNMTFGDR 64 Query: 1042972 AVARDGHKTKCGAILIASQ 1043028 +A DG KT CGA LIASQ Sbjct: 65 PIATDGDKTACGATLIASQ 83 >ref|NP_945059.1|gp28 Length = 186 Score = 50.8 bits (120), Expect = 3e-04 Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Frame = +1 Query: 1042801 FIVLGDKHSHGGVVTSASGIAKIDGKGIARRNDTVTCPLHGVNY---IDEGDDTAIIESR 1042971 FI GD +HGG V + + G+ IA D VTCP G Y + + R Sbjct: 5 FICEGDTTTHGGRVVGCNVANTVHGRAIALLGDMVTCPRCGGIYPIVSVKRELNMTFGDR 64 Query: 1042972 AVARDGHKTKCGAILIASQ 1043028 +A DG KT CGA LIASQ Sbjct: 65 PIATDGDKTACGATLIASQ 83 >ref|NP_695118.1|putative tail protein Length = 1517 Score = 49.7 bits (117), Expect = 6e-04 Identities = 122/625 (19%), Positives = 231/625 (36%), Gaps = 35/625 (5%) Frame = -3 Query: 536139 QRIGNVAAGVADTDAVNVGQLTSTVAPLQTSISTAASNITNLQGNVTSINTSLSTATTNI 535960 Q + + + + + Q+ ++ + IS A I N+ + S+ T++STA I Sbjct: 806 QTLAPIISQIISAIVTAITQIAPIISSIGGVISAALQGIANI---IQSVGTAISTAAQGI 862 Query: 535959 SD-LKAADARNVKYDGQSGFDSVTFAGTN-------------GTTLHNVAAGVANTDAVN 535822 +++A +G + S T A GT++ A G+ N Sbjct: 863 GQGIQSA------LEGVASIISATGAAIGAALQGIASVVQSVGTSISTAAKGIGN----G 912 Query: 535821 VGQLNGGLSSLSTSVTNNINTTLGSLSTSINNQIGNATKNAVQYDDDAHSGV------TL 535660 + G+SS+ TSV N I++ L SL+ ++ N IG A + A + +GV L Sbjct: 913 IKSAFEGISSVITSVGNAISSVLNSLA-NVFNSIGTAAQKAGVGFNQLANGVVKITNTNL 971 Query: 535659 GGKGAQSPVALHNVADGVATGDAVNVGQLGKATDTLNQSITNVSNSVTTLG---NQVTTN 535489 G A H V G + + + Q G L ++ VS S T ++ T+ Sbjct: 972 GDMAASLAAVAHGV--GSISDSSAGLAQAGAGMAQLGNGMSKVSASATGAVAGLSRFTSV 1029 Query: 535488 TGNIAALQQDALQWNANLGTYDASHGGNGPQRIGNVA--AGKNGTDAVNVDQLNAAIQDG 535315 T +I + + GT ++ Q + ++ AG T + + ++ Sbjct: 1030 TTSIQSAFTSLQSLLTSAGTSFSTFSIQAMQSLTGLSAIAGPITTFRTQIIMIVPSLMQA 1089 Query: 535314 TSQLDALAVKYDDASKKQVSLGGGNGASPVRLTNVAEGNVAAGSTDAVNGAQLRRXXXXX 535135 + L+ + + S+G +LT + S A+ G Sbjct: 1090 AAGLNMFSTVAIGLTTSLTSIGAVMTMLATQLTTLTTSFTMMASISAMLGTSF------- 1142 Query: 535134 XXXXXXXXXANPDGSITAPAYKVGGGSFNNVGDALTNLDGRVGSNTTTLENHETRIGNAE 534955 ++ A + + G SF V +LT L+ + ++L T+ A Sbjct: 1143 --------------TMMATSSSMLGTSFMTVETSLTMLNSQFMMFASSLMQLTTQFMTAS 1188 Query: 534954 TNIAGNTAAIAGLQQDALQFDPKAGAYNAARGGAPTKLTNVADGNIAAGSTDAVNGGQLS 534775 + A+ + AL GA R A + A ST LS Sbjct: 1189 IPLKMFNVALT-MMTPALMM----GASGFVRFNAQVMQST------AGMST-------LS 1230 Query: 534774 GVKSSLEQQITQVSNQAGEAVKNVVKYDVDTNGNRL-NSVSLIGGDTNAAVVLKNVAAGT 534598 S++ ++T V++ A A ++++ + T+ R+ +++S G +A+ + + Sbjct: 1231 AAISTIPAKLTSVASAANIATSSIMR--IATSAPRIASAMSSAAGQVQSAMQRMAQSVQS 1288 Query: 534597 DDTDAVNVKQLKGVQSSLN-------QLGALAVQYDD--SSKSSITLGGAGGTRITNVQA 534445 + + + G Q+ N +GA++ D ++ + +GG G +I Sbjct: 1289 SSQRMIQMGRQAGTQTGQNIANGIKSSVGAVSSAVDSLVNAARAHAMGGVGAMQIVGAMI 1348 Query: 534444 GALSATSTDAVNGSQLYATNQQVAK 534370 G A A G+ A N VA+ Sbjct: 1349 GKGLANGMIASLGAVTAAANALVAQ 1373 >ref|YP_195201.1|hypothetical protein Length = 75 Score = 48.9 bits (115), Expect = 0.001 Identities = 35/77 (45%), Positives = 42/77 (54%) Frame = +3 Query: 3783 IVIVGGGTAGWMSASYLVRALQQQANITLIESEAIPRIGVGEATIPNLQKVFFDFLGIPE 3962 IVIVGGGTAGW+ ASY + Q NI+ SE IP IGVGE T F D L Sbjct: 3 IVIVGGGTAGWI-ASYYLSKTHQCINIS---SEEIPIIGVGEGTTGK----FLDILAEDR 54 Query: 3963 REWMPQVNGAFKAAIKF 4013 + M +++ K IKF Sbjct: 55 IKLMIELDALPKLGIKF 71 >ref|NP_958678.1|Bbp9 Length = 508 Score = 48.1 bits (113), Expect = 0.002 Identities = 96/413 (23%), Positives = 154/413 (37%), Gaps = 44/413 (10%) Frame = -3 Query: 536376 VALHNVADGVATGDAVNVGQLGKATDTLNQSITNVGNSVTTLGNQVT----TNTGNIAAL 536209 VA+ + ADGV + + D NQ +N G ++TTL T T T + Sbjct: 35 VAILSDADGVESTLTLGTDYTVALND--NQD-SNPGGTLTTLATYATGYKITLTSEVPNT 91 Query: 536208 QQDALLWNTNLGAYDASHGGNGPQRIGNVAAGVADTDAVNV-----GQLTSTVA------ 536062 Q + L TN G + + R+ +AD + V G L+S+ Sbjct: 92 QPETL---TNQGGFYPKVIEHALDRLVIQIQQLADKLSRTVQAPISGGLSSSEILEQLAE 148 Query: 536061 --PLQTSISTAASNITNLQGNVTSINT---SLSTATTNISDLKAADARNVKYD-GQSGFD 535900 PL +++ +NI + N I+T S+ T DL A V YD G Sbjct: 149 QLPLVSAVYGHLANIDAVATNEADIDTVAASVGAVDTVAGDLGGTWAAGVSYDFGSIAVP 208 Query: 535899 SVTFAGTNGTTLHNVAAGVANTDAV--NVGQLNGGLSSLST--SVTNNINTTLGSLSTSI 535732 + G + VA + N D V N+G ++ + LS+ +V N+I++ + Sbjct: 209 PIGNTSPPGGNIVIVANSIGNVDTVAENIGDVSTVSTHLSSMLAVANDIDSVVS------ 262 Query: 535731 NNQIGNATKNAVQYDDDAHSGVTLGGKGAQSPVALHNVAD-----------GVATGDAVN 535585 + +N D+A + T+ G A N+ D G+A N Sbjct: 263 ---VAGDLENIDAVADNAANINTVAGANANVNTVASNILDVGTVAGNIDDVQAVAGNAAN 319 Query: 535584 VGQLGKATDTLNQSITNVSNSVTTLGNQVTTNTGNIAALQQDALQWNANLGTYDASHGGN 535405 + + D +N + N +N +GN N +A+ NAN A++ GN Sbjct: 320 INVVADNADNINATAANQANINAAVGNADNINAAVANQANINAVVGNANNINAVAANEGN 379 Query: 535404 GPQRIGNVA--------AGKNGTDAVNVDQLNAAIQDGTSQLDALAVKYDDAS 535270 + N+A A T A N + A D T Q + + Y D S Sbjct: 380 VNTVVDNLADVQTVAGIAADVSTVAENEAAVAALGNDLTGQ--PMVIDYGDLS 430 >ref|NP_996571.1|hypothetical protein predicted by GeneMark Length = 508 Score = 48.1 bits (113), Expect = 0.002 Identities = 96/413 (23%), Positives = 154/413 (37%), Gaps = 44/413 (10%) Frame = -3 Query: 536376 VALHNVADGVATGDAVNVGQLGKATDTLNQSITNVGNSVTTLGNQVT----TNTGNIAAL 536209 VA+ + ADGV + + D NQ +N G ++TTL T T T + Sbjct: 35 VAILSDADGVESTLTLGTDYTVALND--NQD-SNPGGTLTTLATYATGYKITLTSEVPNT 91 Query: 536208 QQDALLWNTNLGAYDASHGGNGPQRIGNVAAGVADTDAVNV-----GQLTSTVA------ 536062 Q + L TN G + + R+ +AD + V G L+S+ Sbjct: 92 QPETL---TNQGGFYPKVIEHALDRLVIQIQQLADKLSRTVQAPISGGLSSSEILEQLAE 148 Query: 536061 --PLQTSISTAASNITNLQGNVTSINT---SLSTATTNISDLKAADARNVKYD-GQSGFD 535900 PL +++ +NI + N I+T S+ T DL A V YD G Sbjct: 149 QLPLVSAVYGHLANIDAVATNEADIDTVAASVGAVDTVAGDLGGTWAAGVSYDFGSIAVP 208 Query: 535899 SVTFAGTNGTTLHNVAAGVANTDAV--NVGQLNGGLSSLST--SVTNNINTTLGSLSTSI 535732 + G + VA + N D V N+G ++ + LS+ +V N+I++ + Sbjct: 209 PIGNTSPPGGNIVIVANSIGNVDTVAENIGDVSTVSTHLSSMLAVANDIDSVVS------ 262 Query: 535731 NNQIGNATKNAVQYDDDAHSGVTLGGKGAQSPVALHNVAD-----------GVATGDAVN 535585 + +N D+A + T+ G A N+ D G+A N Sbjct: 263 ---VAGDLENIDAVADNAANINTVAGANANVNTVASNILDVGTVAGNIDDVQAVAGNAAN 319 Query: 535584 VGQLGKATDTLNQSITNVSNSVTTLGNQVTTNTGNIAALQQDALQWNANLGTYDASHGGN 535405 + + D +N + N +N +GN N +A+ NAN A++ GN Sbjct: 320 INVVADNADNINATAANQANINAAVGNADNINAAVANQANINAVVGNANNINAVAANEGN 379 Query: 535404 GPQRIGNVA--------AGKNGTDAVNVDQLNAAIQDGTSQLDALAVKYDDAS 535270 + N+A A T A N + A D T Q + + Y D S Sbjct: 380 VNTVVDNLADVQTVAGIAADVSTVAENEAAVAALGNDLTGQ--PMVIDYGDLS 430 >ref|NP_996619.1|hypothetical protein predicted by GeneMark Length = 508 Score = 48.1 bits (113), Expect = 0.002 Identities = 96/413 (23%), Positives = 154/413 (37%), Gaps = 44/413 (10%) Frame = -3 Query: 536376 VALHNVADGVATGDAVNVGQLGKATDTLNQSITNVGNSVTTLGNQVT----TNTGNIAAL 536209 VA+ + ADGV + + D NQ +N G ++TTL T T T + Sbjct: 35 VAILSDADGVESTLTLGTDYTVALND--NQD-SNPGGTLTTLATYATGYKITLTSEVPNT 91 Query: 536208 QQDALLWNTNLGAYDASHGGNGPQRIGNVAAGVADTDAVNV-----GQLTSTVA------ 536062 Q + L TN G + + R+ +AD + V G L+S+ Sbjct: 92 QPETL---TNQGGFYPKVIEHALDRLVIQIQQLADKLSRTVQAPISGGLSSSEILEQLAE 148 Query: 536061 --PLQTSISTAASNITNLQGNVTSINT---SLSTATTNISDLKAADARNVKYD-GQSGFD 535900 PL +++ +NI + N I+T S+ T DL A V YD G Sbjct: 149 QLPLVSAVYGHLANIDAVATNEADIDTVAASVGAVDTVAGDLGGTWAAGVSYDFGSIAVP 208 Query: 535899 SVTFAGTNGTTLHNVAAGVANTDAV--NVGQLNGGLSSLST--SVTNNINTTLGSLSTSI 535732 + G + VA + N D V N+G ++ + LS+ +V N+I++ + Sbjct: 209 PIGNTSPPGGNIVIVANSIGNVDTVAENIGDVSTVSTHLSSMLAVANDIDSVVS------ 262 Query: 535731 NNQIGNATKNAVQYDDDAHSGVTLGGKGAQSPVALHNVAD-----------GVATGDAVN 535585 + +N D+A + T+ G A N+ D G+A N Sbjct: 263 ---VAGDLENIDAVADNAANINTVAGANANVNTVASNILDVGTVAGNIDDVQAVAGNAAN 319 Query: 535584 VGQLGKATDTLNQSITNVSNSVTTLGNQVTTNTGNIAALQQDALQWNANLGTYDASHGGN 535405 + + D +N + N +N +GN N +A+ NAN A++ GN Sbjct: 320 INVVADNADNINATAANQANINAAVGNADNINAAVANQANINAVVGNANNINAVAANEGN 379 Query: 535404 GPQRIGNVA--------AGKNGTDAVNVDQLNAAIQDGTSQLDALAVKYDDAS 535270 + N+A A T A N + A D T Q + + Y D S Sbjct: 380 VNTVVDNLADVQTVAGIAADVSTVAENEAAVAALGNDLTGQ--PMVIDYGDLS 430 >ref|YP_024938.1|gp18 Length = 637 Score = 46.6 bits (109), Expect = 0.005 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%) Frame = +1 Query: 922180 SVRRFGVMGDGVTDDTAALQVALN----AGIPLYFPPGTYLYSN-TLTATASIIGA-GWN 922341 +VR +G G+G DDT A+Q +N +G ++ PPG YLYS TL S+ GA ++ Sbjct: 259 NVRNYGATGNGGVDDTLAIQECINSLASSGGEVFLPPGVYLYSTLTLPPGVSLRGASSFS 318 Query: 922342 SIL-------QCTTSQGQNASIYWNNASNFKIQNLQFYSKNAAGYYSSESAGPVNLESCS 922500 S+L C QG N SN ++ + + + + E+ + Sbjct: 319 SVLLEAHATGDCIIMQGD------NTISNLQLNHKVTRTSGRTVWMQGNNCTLREFEAYN 372 Query: 922501 LFEISGCQVNNAASQAVMMRACVNGKV 922581 +++ Q ++ AV+ +NG + Sbjct: 373 YYQLWDAQTSSGG--AVVFPKVINGNI 397 >ref|NP_463477.1|putative tape-measure protein Length = 1794 Score = 46.6 bits (109), Expect = 0.005 Identities = 85/363 (23%), Positives = 140/363 (38%), Gaps = 14/363 (3%) Frame = +2 Query: 1257608 VVALSRGNTSIAIGRQSAATADFSTAIGNVAYASGVS---GIAMGDSALASGYRSVA-IG 1257775 V A+ S A+ SA FS A+ + A +G + + G SA+ SG ++ +G Sbjct: 236 VKAIPSATKSAALAVSSAMKTAFS-AVVSAAKTTGTTVKTALTNGFSAIKSGAKTAGQVG 294 Query: 1257776 SADTNLAGNDGISTGANYDPNTQTRASGARTVALGAGAVAAPDDSVALGSNSVGESNAQG 1257955 + GN STG+ + + AR+ A GAGA G +++ + Sbjct: 295 ISALKGLGNAAKSTGSLIKNGLVSGFNAARSAAKGAGA----------GMREALKNSVEK 344 Query: 1257956 PAAFSGDAIPVNGAVSVGQAGAERQIKNVAGGTVGTDAVNVNQLTAVSNSAVKYDKNPDG 1258135 PA + +I + A + G A + + A G V T LT ++ SA D Sbjct: 345 PAEQARFSI-LRLAAAFGLIAATKNVVGSAIGRVDTIDTATKSLTVLTGSA------KDA 397 Query: 1258136 SINYNSVTLNPGGSLTTMTNLAAGDISQNSKDAVNGSQLYQTNQTVSTLGNNAASVIGGG 1258315 + +T G+ + +A G K G Q + + + A V G Sbjct: 398 QLVMTDLTAAIDGTPIALDAVALG----AKKMVAAGMQAANVKPVFTAIADAAYGVGNGS 453 Query: 1258316 ASYDPSTG-----QMTGPTFSIAGGKQTNLSDAINALNQGWNVTTGGNTSGASVTAVQP- 1258477 S D T Q +G +S +++ ++A W + N++G SV ++ Sbjct: 454 ESIDQMTDAISALQASGVAYS------DDINRLVDAGVPAWQIL--ANSTGKSVGEMKKY 505 Query: 1258478 GSTVTFNGGKNIALAQNGADITIATSDTPTFTSVGI-DNGGPTLSGSGLNM---AGKKIT 1258645 S + K IA+ G + T G+ G T+SGS NM A K + Sbjct: 506 VSEGSLESTKAIAMLTKGIEEGTTGMAGNTAKMAGLAKTAGNTISGSFANMKTAAVKSLA 565 Query: 1258646 NVA 1258654 N+A Sbjct: 566 NIA 568 >ref|NP_690646.1|pre-neck appendage protein Length = 860 Score = 46.2 bits (108), Expect = 0.007 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = +1 Query: 922159 ELVDLPMSVRRFGVMGDGVTDDTAALQVALNAGIPLYFPPGTYLYSNTLTATAS--IIGA 922332 EL +SV+ +G +GDG TDD A + A+ +G P+Y P G + S ++ ++ I GA Sbjct: 98 ELKQFGVSVKTYGAVGDGKTDDIEAFEKAIASGYPVYIPNGKFAVSRSIKIPSNTVITGA 157 Query: 922333 G 922335 G Sbjct: 158 G 158 >ref|NP_064745.1|gp7 Length = 540 Score = 44.7 bits (104), Expect = 0.019 Identities = 76/321 (23%), Positives = 113/321 (35%), Gaps = 10/321 (3%) Frame = -3 Query: 934347 NGLPSQQPNLDTPSWATLLTGAWANRHQVLSDAPNQALQAPTTFDALKTANAGLLGAAVG 934168 N + + N + A L+ A + A A A T A N+ + Sbjct: 92 NNAETAEVNAEASETAAGLSATAAATSATNAGASETAASASATASATSATNSATSASQAA 151 Query: 934167 SPALASLLTAGRNAGSLDTLANCA-----AVDSCVTQQGATMIQQGYSLVVAQYH--SAQ 934009 + A A+ ++ G A S AN A + + TQ A + + A SA Sbjct: 152 TSASAAAVSEGNAATSETNAANSATSASGSASTATTQASAASVSATNAATSASNAATSAT 211 Query: 934008 DAALNYGLGASAYANTL-QQLDAAVGALVAETAKRNKENWLVVVTGGHGLNAAGGSDGLP 933832 +AA + A++ N + A A T++ N T NAA + Sbjct: 212 NAAASQAAAATSETNAAASESTVTTSATNAATSEANAATSASTATT-QATNAATSASTAS 270 Query: 933831 LLSESTTFIAMNQADNGRLGSAAQPASLADLHTRASIADVAPTVLAQLGALPAPSAYEMD 933652 + + N A + SAA A+ A A++A + LG + + D Sbjct: 271 TSATNAATSETNAASSA--SSAASSATSAQASKDAALAALDSFDDRYLGQKVSDPTLDND 328 Query: 933651 GGELI-GTQPVSQLAGATSTDGHSVVLTWVAPASGAIAVYRAGQQIATLPAGTTTYTDSN 933475 G L+ G + G SV L A SGA+ + + A T N Sbjct: 329 GNALVAGALYFNTTDGIMKVYDGSVWLAAYASLSGALIATNNLSDVLDVTASRT-----N 383 Query: 933474 LGL-TAAGTYSFDYVVTAGGA 933415 LGL TAA T S DY A GA Sbjct: 384 LGLGTAATTASTDYATAAQGA 404 Score = 42.4 bits (98), Expect = 0.094 Identities = 67/268 (25%), Positives = 103/268 (38%), Gaps = 35/268 (13%) Frame = +3 Query: 1048941 SANSAAAWRQSAVAQDAKFTVSGIPSTSASN------TVSGVLNGVTLNLSAAAVSATDT 1049102 + NSA + Q+A + A G +TS +N + SG + T SAA+VSAT+ Sbjct: 140 ATNSATSASQAATSASAAAVSEGNAATSETNAANSATSASGSASTATTQASAASVSATNA 199 Query: 1049103 QTLTVSPDTK------SQAATITNFVN----QYNTVVKTMGALSSYTPGASTQGTLIGDS 1049252 T + T SQAA T+ N + A +S A++ T + Sbjct: 200 ATSASNAATSATNAAASQAAAATSETNAAASESTVTTSATNAATSEANAATSASTATTQA 259 Query: 1049253 TLHTIRNALASIVARGVPNKNGDGHTNL-----TAIGVSLEKDGTLRA----DSAKL--- 1049396 T + AS A + ++ +A KD L A D L Sbjct: 260 TNAATSASTASTSATNAATSETNAASSASSAASSATSAQASKDAALAALDSFDDRYLGQK 319 Query: 1049397 --DSALNNNSSGV---AHLFNSTNGVGKQLTDQI--ETFTKRGGMIDLRTNALGADLKRV 1049555 D L+N+ + + A FN+T+G+ K + + G + + TN L +D+ V Sbjct: 320 VSDPTLDNDGNALVAGALYFNTTDGIMKVYDGSVWLAAYASLSGAL-IATNNL-SDVLDV 377 Query: 1049556 TQQQTNLADYAAQLTKQYQAQFTALNAL 1049639 T +TNL A T A AL Sbjct: 378 TASRTNLGLGTAATTASTDYATAAQGAL 405 Score = 40.0 bits (92), Expect = 0.47 Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 2/115 (1%) Frame = +1 Query: 454474 AIASAVPSTASFGQSARASEPSVQNTSPCSASDDAMNCISETSAWNANTSAMPISTTPVV 454653 A +A S + G SA A+ S N + A S TSA N+ TSA +T+ Sbjct: 97 AEVNAEASETAAGLSATAAATSATNAGASETAASASATASATSATNSATSASQAATSASA 156 Query: 454654 FIPRQRATASSTSADRNAKTNA--FADTTQVCAMPGIVTSSTIASDAPNAAAAET 454812 + A+S + N+ T+A A T A V+++ A+ A NAA + T Sbjct: 157 AAVSEGNAATSETNAANSATSASGSASTATTQASAASVSATNAATSASNAATSAT 211 >ref|NP_958192.1|gene 16 protein Length = 385 Score = 44.3 bits (103), Expect = 0.025 Identities = 24/53 (45%), Positives = 31/53 (58%) Frame = +2 Query: 1357646 LTVRQIEAANAIGKLYLLSDGRGRFLRIGPDGSKTTLVRVSIDGKQRDKPLGK 1357804 LTV+QIEAA K Y L DG G +L + G K +R IDGK++ +GK Sbjct: 2 LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGK 54 >ref|NP_944360.1|gp51 Length = 521 Score = 43.9 bits (102), Expect = 0.032 Identities = 115/459 (25%), Positives = 166/459 (36%), Gaps = 32/459 (6%) Frame = +2 Query: 1257656 SAATADFSTAIGNV----AYASGVSGIAMGDSALASGYRSVAIGSADTNLAGNDGISTGA 1257823 SA T D + G + A A + G A+G AIG + AG G++T Sbjct: 105 SALTTDQAQITGQLNNPTATADYIYGAALG-----------AIGQPVFDGAGVRGVATQT 153 Query: 1257824 NYDPNTQTRASGARTVALGAGAVAAPDDSVALGSNSVGESNAQ--GPAAFSGDAIPVNGA 1257997 N T + AGA A LG N N Q G + D + G Sbjct: 154 AGSTNWTTNGVAGYVLNNQAGATATKSAVGLLGINICAVDNCQSWGTSTIVSDVLGFTGV 213 Query: 1257998 VSVGQAGAERQ-----------------IKNVAGGTVGTDAV-----NVNQLTAVSNSAV 1258111 AG RQ I +A GT T + V+ L + + Sbjct: 214 ----SAGVGRQLYGNESDLNVSSPNTNGIAYMAAGTALTPSAYLVGFQVSNLYGGTGAKW 269 Query: 1258112 KYD-KNPDGSINYNSVTLNPGGSLTTMTNLAAGDISQNSKDAVNGSQLYQTNQTVSTLGN 1258288 Y +PDG+ ++ + G + T+ NL++ I N DA Q T + L Sbjct: 270 NYAFSSPDGN---STNAMYIGLTATSGNNLSSQPIVFNYTDAGGAKHAPQLLATPNGLQT 326 Query: 1258289 NAASVIGGGASYDPSTGQMTGPTFSIAGGKQTNLSDAINALNQGWNVTTGGNTSGASVTA 1258468 A ++I G A+ + G P +I G +SD + V +T GAS+ Sbjct: 327 TAGALIPGSAN-STALGLPALPWGTIYGTTAV-ISDTSASNQATLTVAAPNDTQGASIKF 384 Query: 1258469 VQPGSTVTFNGGKNIALAQNGADITIATSDTPTFTSVGIDNGGPTLSGSG-LNMAGKKIT 1258645 G T K I + QNGA + + +N TLS SG L++ G T Sbjct: 385 QGNGVTTP---TKTIRV-QNGAF---------QWVNDAFNNIIATLSDSGSLSVNGNITT 431 Query: 1258646 NVATG--DVSSSSKDAVNGSQLYQTNQTVSTLGNNAASVIGGGASYDPSTGQMTGPTFSI 1258819 TG V +++ ++NG Q + +S AA+V GA+ FS Sbjct: 432 PTGTGALPVYTATGASLNGPHAVQGSNALSA---GAATVTFSGAA-----------AFSS 477 Query: 1258820 AGGKQTNLSDAINALNQGWNVTTGGNTSGASVTAVQPGS 1258936 A +D A N TSG SVT V G+ Sbjct: 478 ASSYVCTANDTTAA-----NAVRVNQTSGTSVTFVGTGA 511 >ref|YP_024939.1|gp19 Length = 357 Score = 43.5 bits (101), Expect = 0.042 Identities = 89/378 (23%), Positives = 148/378 (39%), Gaps = 21/378 (5%) Frame = +2 Query: 1257995 AVSVGQAGAERQIKNVAGGTVGTDAVNVNQLTAVSNSAVKYDKNPDGSINYNSVTLNPGG 1258174 A+++G A Q+ N AG T G V+ +A V N G++ N+V N Sbjct: 13 ALALGATLAPIQLLNPAGSTSGQAIVSTGSSSAPVWGGVGL--NGIGAVAANTVLANATN 70 Query: 1258175 SLTTMTNLAAGDISQNSKDAVNGSQLYQTNQTVSTLGNNAASVIGGGASY------DPS- 1258333 + T + S +S A+N Y T + + AS +GG A+ P+ Sbjct: 71 ASANPTAFSMPSCSTSSS-ALN----YTTGTGIGCNSSINASTLGGTAAAAYALLASPTF 125 Query: 1258334 TGQMTGPTFSIAGGKQTNLS-----DAINALNQGWNVTTGGNTSGASVTAVQPGSTVTFN 1258498 TG T PT S AG T L+ +AI A + GNT+ A+V+A Sbjct: 126 TGTPTAPTAS-AGTNTTQLATTAFTNAIFAAPPAF-----GNTTPAAVSAT--------- 170 Query: 1258499 GGKNIALAQNGADITIATSDTPTFTSVGIDNGGPTLSGSGLNMAGKKITNVATGDVSSSS 1258678 T++ S T + + P G+ AGK T ATG ++ SS Sbjct: 171 --------------TLSASSTVSGSGFSTYLASPPAIGATTPAAGKFTTLQATGAITPSS 216 Query: 1258679 KDAVNGSQLYQTNQTVSTLG------NNAASVIGGGASYDPSTGQMTGPTFSIAGGKQ-- 1258834 + G+ N + ++G N + GA+ + ++ +T + ++G Q Sbjct: 217 TAGIVGTTT-NDNASAGSVGEYPTPTNLTGVSLTSGAAANGASVSLTAGDWEVSGMCQFI 275 Query: 1258835 TNLSDAINALNQGWNVTTGGNTSGASVTAVQPGSTVTFNGGKNIALAQNGADITIATSDT 1259014 + I+++ G N T+ + TA+Q T G ++ A I++A + T Sbjct: 276 PAGTTTISSIIAGINTTSAALPGAPNETAIQG----TLTTGAQQLISTWPARISLAATTT 331 Query: 1259015 P-TFTSVGIDNGGPTLSG 1259065 T G T++G Sbjct: 332 VYTVCQAGFGTSTMTVNG 349 >ref|YP_164732.1|orf97 Length = 2112 Score = 43.1 bits (100), Expect = 0.055 Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 5/229 (2%) Frame = -3 Query: 537594 LANSATAIGTVAVAQGNTALAIGRQSAAVGDFSMAVGNVADARGTSSIALGHSALASGDR 537415 +A+ AT G A ALA Q+ GD + V N A + ++ G +A + D+ Sbjct: 694 VASQATTTGDNASYAAAQALATANQAQTAGDSATRVANNASQAASGAVIAGSTASVNADK 753 Query: 537414 SVAIGGANPTTSDGVSAGASYDAATQTRAG----GTQSVAIGAGAQTNDNNQVAIXXXXX 537247 +V++ AN S G +A + A+Q +G G+ + I A T N + Sbjct: 754 AVSV--ANQAKSAGDNATRVANNASQAASGAILAGSTATVIANKASTVANEAKSAGDNAT 811 Query: 537246 XXXXXGTPVFGGTAAPVGGAVSFGAIGKERQLKNVAAGAADTDAVNVQQLKNVNGTLSTS 537067 T V + ++ E +++ A A + A N G+ +++ Sbjct: 812 SVANNATSVANSAKSTADSTYAYA--NSEIAVQSTAITKAQSTADNAFSQAQAVGSQASA 869 Query: 537066 IATVDARVTSVGNSLSTTISNVDQRVTNVGNSLSTS-IVTATKNVVKYT 536923 V + T+ + ST + + T + N TS VT K+ K T Sbjct: 870 EIAVQSNATA--KAQSTADNAFSKATTAIDNGKVTSQAVTDLKDGSKLT 916 Score = 41.2 bits (95), Expect = 0.21 Identities = 112/508 (22%), Positives = 185/508 (36%), Gaps = 23/508 (4%) Frame = -3 Query: 535032 LTNLDGRVGSNTT-TLENHETRIGNAE-TNIAGNTAAIAGLQQDALQFDPKAGAYNAARG 534859 + N D + + T T + I NA+ N+A TA + +DA K G N A G Sbjct: 440 IVNTDTYIKNGTIKTAHIGDGAITNAKIANLAVGTAQL----EDAAITRAKIG--NLAVG 493 Query: 534858 GAPTKLTNVADGNIAAGSTDAVNGGQLS-GVKSSLEQQITQVSNQAGEAVKNVVKYDVDT 534682 A + + D + S + +N G + V S + +++ V +V + Sbjct: 494 TAQIEDAAITDAKVGNLSANHLNAGTIDFSVISGIHINASEID------VGKIVADQIFV 547 Query: 534681 NGNRLNSVSL-IGGDTNAAVVLKNVAAGTDDTDAVNVKQLKGVQSSLNQLGALAVQYD-- 534511 NG L +S +G T+ + NV DD + N + Q+ +Q L QY+ Sbjct: 548 NG--LGDISKNLGTVTSGNINGTNVNDDIDDLNDPNSMSVIEKQTRASQFNGLTSQYNVI 605 Query: 534510 -----DSSKSSITLGGAGGTR---ITNVQAGALSATSTDAVNGSQL-YATNQQVAKNTTD 534358 D++ S+ L A +TN A +++S D + ++L + N ++ + Sbjct: 606 LSRAKDANISTTDLTTAYNNLKDFMTNPLADTSNSSSIDRASYNKLIFYYNSALSDVQME 665 Query: 534357 ITNLQGNVTNIANGKAGL-VQQQDPNGAITVGKDTGGSSVNFSGTAGDRVLTGVAAGVNE 534181 + N N +I+N ++ + V Q + A V + N S A + T A Sbjct: 666 LRNSYNN--DISNMQSSVSVASQAASSAAIVASQATTTGDNASYAAAQALATANQAQTAG 723 Query: 534180 NDAVNMGQFNNALKXXXXXXXXXXXXXXANTTWIARADAGSIGSTATATGKNAVAVGQGS 534001 + A + NNA + A + A GSTA+ AV+V + Sbjct: 724 DSATRVA--NNASQ--------------------AASGAVIAGSTASVNADKAVSVANQA 761 Query: 534000 VADRDNSFSVGAKGSERQVTNVAAGTAPTDAVNVQQLNDNLSAASNQAKGYTDQRIG--- 533830 + DN+ V S+ + AG+ T N S +N+AK D Sbjct: 762 KSAGDNATRVANNASQAASGAILAGSTATVIAN------KASTVANEAKSAGDNATSVAN 815 Query: 533829 ---QVYNSFNDLKKDMYGGVASAMAVAGLPQPTGAGRSMVSAATSNYHGQQ-GFAAGYSY 533662 V NS Y S +AV Q T ++ +A + Q G A Sbjct: 816 NATSVANSAKSTADSTYAYANSEIAV----QSTAITKAQSTADNAFSQAQAVGSQASAEI 871 Query: 533661 VTESNRWVVKASVTGNTRSDFGAVVGAG 533578 +SN S N S + G Sbjct: 872 AVQSNATAKAQSTADNAFSKATTAIDNG 899 Score = 40.8 bits (94), Expect = 0.27 Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 17/240 (7%) Frame = -3 Query: 536364 NVADGVA--TGDAVNVGQLGK-ATDTLN--------QSITNVGNSVTTLGNQVTTNTGNI 536218 N+A G A A+ Q+G A DT N I N+ +G+ TN Sbjct: 1321 NMAVGTAQIANGAITNAQIGSLAVDTANIKDAAISSAKIANLAVGTAQIGDGAITN---- 1376 Query: 536217 AALQQDALLWNTNLGAYDASHGGNGPQRIGNVAAGVADT--DAVNVGQLTSTVAPLQTSI 536044 A + +G ++G +IG++A G A +AVN ++ +A I Sbjct: 1377 ------AKIGKLAVGTAQIANGAITDAQIGSLAVGTAQIKDEAVNSAKIAK-LAVGTAQI 1429 Query: 536043 STAASNITNLQGNVTSINTSLSTATTNISDLKAAD-ARNVKYDGQSGFDSVTFAGTNGTT 535867 A ITN + ++ T+ A I+D + + + N G F+++T N + Sbjct: 1430 GDGA--ITNAKIGNLAVGTA-QIANAAITDAQVGNVSANKLTAGIIDFNTITGKNINAS- 1485 Query: 535866 LHNVAAGVANTDAVNVG---QLNGGLSSLSTSVTNNINTTLGSLSTSINNQIGNATKNAV 535696 N+ G +TD +NVG L+ L +++ +N S ST + +A+ N V Sbjct: 1486 --NITTGTLSTDRLNVGTLSALSANLGNVTAGSLKGVNIIANSFSTPNGSFTTDASGNVV 1543 >ref|NP_803663.1|ORF097 Length = 816 Score = 42.7 bits (99), Expect = 0.072 Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 10/213 (4%) Frame = +3 Query: 765903 NEPTAVEVDV--DSDVTELLVE------LRPVDNEPTAVEVDVDSDVTELLVELRPVDNE 766058 NE VE+ + D+TE V + V++ P + +V ++V E E P + E Sbjct: 242 NESPDVEITETEEVDITEPAVADAETEVVETVEDTPDTTDSEV-AEVVETESESIPAEAE 300 Query: 766059 PTA-VEVDVDSDVTALLVELRPVDNEPTAXXXXXXXXXTELLVELRPVDNEPTAVEVDVD 766235 P V VD + VT +VE E E L EL V +E + D Sbjct: 301 PDEIVAVDEEVAVTDPIVEEAAETAEVAE----------EGLSELEEVRDEAEEELTNDD 350 Query: 766236 SDVTELLVELRPVDNEPTAVEVDVDSDVTALLVELRPVDSELMPVDVDVDSDVTALLVEL 766415 SD T++L+ + E T E + S + +E V+ + + + D DV+ +E Sbjct: 351 SDSTDVLIN--EAETEETVAETETASTIAEPTIEEGAVEDDSETIVAEADDDVSEDDIEE 408 Query: 766416 RPVDNEPTAVEV-DVDSDATELLVELKPVEADE 766511 + + E +++ DVD + TE VE ADE Sbjct: 409 KLAEGE---IDIPDVDVEVTEDDVEEADEAADE 438 Score = 40.8 bits (94), Expect = 0.27 Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 1/164 (0%) Frame = +3 Query: 765897 VDNEPTAVEVDVDSDVTELLVELRPVDNEPTA-VEVDVDSDVTELLVELRPVDNEPTAVE 766073 V++ P + +V ++V E E P + EP V VD + VT+ +VE E Sbjct: 273 VEDTPDTTDSEV-AEVVETESESIPAEAEPDEIVAVDEEVAVTDPIVE-----EAAETAE 326 Query: 766074 VDVDSDVTALLVELRPVDNEPTAXXXXXXXXXTELLVELRPVDNEPTAVEVDVDSDVTEL 766253 V + L EL V +E T++L+ + E T E + S + E Sbjct: 327 VAEEG-----LSELEEVRDEAEEELTNDDSDSTDVLIN--EAETEETVAETETASTIAEP 379 Query: 766254 LVELRPVDNEPTAVEVDVDSDVTALLVELRPVDSELMPVDVDVD 766385 +E V+++ + + D DV+ +E + + E+ DVDV+ Sbjct: 380 TIEEGAVEDDSETIVAEADDDVSEDDIEEKLAEGEIDIPDVDVE 423 >ref|NP_690787.1|immunity repressor Length = 144 Score = 42.7 bits (99), Expect = 0.072 Identities = 19/50 (38%), Positives = 32/50 (64%) Frame = +2 Query: 1201559 VRVVRVRNMLSQEQLGFAADLDRTFISQVERARINVSLDNIERIARALGV 1201708 ++ +R L+Q QL A+L R++++ +ER R N SL +E +A ALG+ Sbjct: 7 IKAIRKERKLTQVQLAEKANLSRSYLADIERDRYNPSLSTLEAVAGALGI 56 >ref|NP_996715.1|putative tape measure protein Length = 843 Score = 42.7 bits (99), Expect = 0.072 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 13/150 (8%) Frame = +1 Query: 923554 AAGTFVIGVTANSVTLSQGTTSAIASG-------ASIVFTPMVCMASQTLATSIAAASGT 923712 AAGT + G+ ++ + S++ SG A +FT + + A SG Sbjct: 545 AAGTSLKGLITSAWNGIKSIISSVVSGIGGIINTAKAIFTGLGSAGGALRSVISGAWSGI 604 Query: 923713 NTLTFTPYPSARGCAVGQGVSGTNIPIGTYVTSVSGNGNGPTVTLSNNFTG-SGIASGAS 923889 ++ +VG +SGT I ++ +S+ G+GNG +S ++G +GI SGAS Sbjct: 605 RSII---------SSVGGSISGTINGIKSFFSSLGGSGNGLRSVMSGVWSGITGIISGAS 655 Query: 923890 ITFTG-----TGSLNNTNGIELFNTRECLV 923964 T +G G N+ I+L ++ Sbjct: 656 STISGIINGIKGIFNSLRNIDLAGAGRAII 685 >ref|NP_944342.1|gp33 Length = 472 Score = 42.4 bits (98), Expect = 0.094 Identities = 50/179 (27%), Positives = 68/179 (37%), Gaps = 8/179 (4%) Frame = -2 Query: 571393 GGGQTTCAIPVFVCRATGSPSYNVGDW--ITSLSGSSTTY---GPGNFGWAALDGSTN-E 571232 GGG T P + A G + +W +T + G + TY G GN G + G Sbjct: 283 GGGCATVGTPNIMSGAGGGGAGQFTEWQALTVVPGETLTYTIGGAGNGGAPNVPGGAGGN 342 Query: 571231 PTIASELSGNTCNITSPPDLGSTGLKSASLRAWNTRFGIYTNGANGSSGQPDFTGYAYVG 571052 TI +SG ++T GS G+ A + YT G NG +G P GY G Sbjct: 343 TTITGSVSGLLLSLTGGVG-GSPGVGGA--------YSAYTAGGNGGAGAP-AGGY---G 389 Query: 571051 PNYGPPGTAGIKGDAYTQFVTDRTTFKPYQGDGAPPSGSGIATN--GTVTASTYQTTGG 570881 + GP G G + P+ G G GS I + A+ Y GG Sbjct: 390 QDTGPQGVGASGGAGGS---------NPFGGGGTAVRGSQIGNTMLAGLAATGYGCGGG 439 Score = 40.0 bits (92), Expect = 0.47 Identities = 92/388 (23%), Positives = 129/388 (33%), Gaps = 16/388 (4%) Frame = +2 Query: 1257893 AAPDDSVALGS-NSVGESNAQGPAAFSGDAIPVNGAVSVGQAGAERQIKNVAGGTVGTDA 1258069 AA + ALGS S ++N+ P + P G G + + GGTV Sbjct: 100 AALQSADALGSWISTADNNSANPDTSTD---PAGGGYVPGYQYGTTALTGLTGGTVTLTN 156 Query: 1258070 VNVNQLTAVSNSAVKYDKN--PDGSINYNSVTLNPGGSLTTMTNLAAGD---ISQNSKDA 1258234 + T A+ + + +VT N G+ AAG I QN Sbjct: 157 AQAAKATVTLAGALTSALTLVVPTWLKHWTVTNNTTGAFAATIKTAAGTGIAIPQNGAPT 216 Query: 1258235 V---NGSQLYQTNQTVSTLGNNAASVIGGGASYDPSTGQMTGPTFSIAGGKQTNLSDAIN 1258405 +G+ + Q + ++ A+ + G D G G + + G T + Sbjct: 217 PVVGDGANIVQVGENIAQ-----ATRLTQGVRLDQLYGTAKGFLRATSSGSTTVPPNVTT 271 Query: 1258406 ALNQGWNVTTGGNTSGASVTAVQPGSTVTFNGGKNIALAQNGADITIATSDTPTFTSVGI 1258585 G GG G V + ++ GG +T+ +T T+T G Sbjct: 272 IYVSG----NGGGAGGGGCATVGTPNIMSGAGGGGAGQFTEWQALTVVPGETLTYTIGGA 327 Query: 1258586 DNGG-PTLSGSGLNMAGKKITNVATGDVSS---SSKDAVNGSQLYQTNQTVSTLGNNAAS 1258753 NGG P + G AG T TG VS S V GS + T G N Sbjct: 328 GNGGAPNVPGG----AGGNTT--ITGSVSGLLLSLTGGVGGSPGVGGAYSAYTAGGN--- 378 Query: 1258754 VIGGGASYDPSTGQMTGPTFSIAGGKQTNLSDAINALNQGWNVTTG---GNTSGASVTAV 1258924 GG + GQ TGP A G + N G G GNT A + A Sbjct: 379 --GGAGAPAGGYGQDTGPQGVGASGG----AGGSNPFGGGGTAVRGSQIGNTMLAGLAAT 432 Query: 1258925 QPGSTVTFNGGKNIALAQNGADITIATS 1259008 G GG + TI TS Sbjct: 433 GYGC-----GGGGCGGVYAAGNTTIPTS 455 >ref|NP_047971.2|gp26 Length = 174 Score = 42.4 bits (98), Expect = 0.094 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%) Frame = +2 Query: 622070 ELAYDEIRSRIFDGRLAPGQKV-SHRGLSDELGFGQMPVRSALHLLESEGLVVVIEKSGT 622246 + AY I I GR PG K+ S R + ++LG G+ +R L L +EG++ V ++S Sbjct: 24 QAAYVIISGWIATGRYGPGDKLPSERAMCEDLGIGRTALRQVLAKLVAEGILEVHQRSAY 83 Query: 622247 YVASPTTSDLREIFEMRLALESTAAFL-AARSGVTADLREA 622366 V P+ + + E A E+TA + +A +TA +R A Sbjct: 84 RV--PSGMRISWVIEDHGANEATAPTIDSAAEALTAGVRSA 122 >ref|NP_511031.1|helicase Length = 418 Score = 42.0 bits (97), Expect = 0.12 Identities = 23/85 (27%), Positives = 42/85 (49%) Frame = -1 Query: 636299 DLFMHLVAENKWEHALVFVKTRNGVDYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKT 636120 D+ H E A+++ + + +AA + AG + I G P+P R +++F+ Sbjct: 181 DVIKHYQKLADGEQAILYASSIYQSEKMAASFNAAGISSAHIDGKTPKPIRDDIIKQFRE 240 Query: 636119 GEVQMLVATDVAARGLDIDDLPLVI 636045 GE+++L D+ G D+ D VI Sbjct: 241 GELKVLCNLDLIGEGFDVPDCSTVI 265 >ref|NP_112719.1|ORF56 Length = 418 Score = 42.0 bits (97), Expect = 0.12 Identities = 27/82 (32%), Positives = 40/82 (48%) Frame = -2 Query: 366196 FRQSPVFVGETVRFNEVVHYVAPGQEDVPAMLDGLRTFLARTSGQSSVMRSTVAAFGFVY 366017 FR PVF+ + VH A GQ+ + L+ L F+ R + ++ ++ F F Sbjct: 182 FRAEPVFIVNQ-NSGKKVHQGATGQDTIKNRLEDLVKFMNRDD-IPTYEKAFISHFYFEN 239 Query: 366016 VHPLADGNGRVHRFLINDVLRR 365951 HP DGNGR RF++ L R Sbjct: 240 THPFYDGNGRTGRFILCSYLAR 261 >ref|NP_835609.1|hypothetical protein Length = 321 Score = 42.0 bits (97), Expect = 0.12 Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 15/205 (7%) Frame = +2 Query: 27284 LALQGGGMHGAFTWGVLDRLLEDGRL---DIEGVCATSAGAMNAAVLA--CGLLKGGEDG 27448 L L GGG GAF GV+ L+ +G L +I V TS G++N A L G D Sbjct: 5 LILSGGGAKGAFQAGVISCLVREGALKDNEILAVAGTSVGSINGVWCASRAALTPKGTD- 63 Query: 27449 AREALHDFWEAVARSAERYNPLRWVPWLKGTHSFGLDHSPLYAFTDMMLRVFSPYQFNPN 27628 + W +++ W LK + L + LY F+ + ++ Sbjct: 64 ---LMKQMWLSLSPKQVYKQQPEWFALLK---TLILKRNYLYDFSPL-------GKYLEK 110 Query: 27629 NLNPLREVLESQVDFDALRKHCPIRLYLCATN----------VETGKIRIFTGEDVCADA 27778 N+ PL ++F+ + +C + L + E +I E++ + Sbjct: 111 NVLPL-------LNFNKIYINCSVNLQNGKSTGIVVKDGNYLFEDQEIPEEQKEELLLKS 163 Query: 27779 VLASACVPTLFQAVAIDGEYYWDGG 27853 +LAS +P +F V I Y DGG Sbjct: 164 ILASCSIPLVFPPVKIGDNTYVDGG 188 >ref|NP_112034.1|integrase Length = 385 Score = 42.0 bits (97), Expect = 0.12 Identities = 23/53 (43%), Positives = 30/53 (56%) Frame = +2 Query: 1357646 LTVRQIEAANAIGKLYLLSDGRGRFLRIGPDGSKTTLVRVSIDGKQRDKPLGK 1357804 LTV+QIEAA K Y L D G +L + G K +R IDGK++ +GK Sbjct: 2 LTVKQIEAAKPKEKPYRLLDSNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGK 54 >ref|NP_958267.1|hypothetical protein Length = 416 Score = 41.6 bits (96), Expect = 0.16 Identities = 47/165 (28%), Positives = 58/165 (35%), Gaps = 10/165 (6%) Frame = -2 Query: 580942 PEADSCVHGAAVQCEQAGTGEQRGEEAGLSDDHRDERAGE-RERAQPRGIALHDRA---D 580775 P A C A E A R E H RA R RA P G R D Sbjct: 97 PAAPGCAPAAPAAPEYAPALRPRAPECDRGAHHLRTRAPRTRTRAVPLGPGARVRTPVED 156 Query: 580774 RRREQHIREPEPQHERQRVLQPA--ERQHEQQHGRRI----EPRQGAVRKRHRRDRELLD 580613 RRR + R P+P+ Q L R+ ++ GRR+ P GA R+ RR Sbjct: 157 RRRTRRRRRPDPRRRVQPRLGVGVHRRRGARRVGRRVRVRARPGPGAARRPRRR------ 210 Query: 580612 CEQRGKMPCVGRMPVRGEPRGAPDRREILRQRFKRAVVRQEHTDH 580478 P PR RR R+ +RA +R H H Sbjct: 211 -------------PHPEHPRAVRPRRRTGRRHRRRASLRPRHRRH 242 >ref|YP_024725.1|gp52 Length = 785 Score = 41.2 bits (95), Expect = 0.21 Identities = 113/507 (22%), Positives = 183/507 (36%), Gaps = 37/507 (7%) Frame = +2 Query: 1257605 GVVALSRGNTSIAIGRQSAATADFSTAIGNVAYASGVSGIAMGDSALASGYRSVAIGSAD 1257784 G V + GN A G +AT S +G + G + + D+ G ++ + Sbjct: 272 GFVQRAVGNYRSANGYVGSATLSTSD-VGCLITWDGNGTLTLPDATTVPGGSAIRV---- 326 Query: 1257785 TNLAGNDGISTGANYDPNTQTRASGARTVALGAGAVAAPD--DSVALGSNSVGESNAQ-G 1257955 AG AN ASGA T G + + + + GE +Q G Sbjct: 327 FKYAGPIASVLAANKPGQLNVPASGADTYTFAVGVFGFFELINESGIKWDVAGELFSQYG 386 Query: 1257956 PAAFSGDAIPVNGAVSVGQAGAERQIKNVAGGTVGTDAVNVNQLTAVSNSAVKYDKNP-- 1258129 A D + Q GA +N G + GT +N N A N+ + +P Sbjct: 387 TTAAQFDNSSKLATTAFIQ-GALGNFRNQIGLSAGT-TLNAN---AWGNAYTLFGGSPYN 441 Query: 1258130 ------DGSINYNSVTLNPGGSLTTMTNLAAGDISQNSKDAVNGSQLYQTNQTVSTLGNN 1258291 +N ++ + GS T T + AG S + + L TL ++ Sbjct: 442 VTLPLLSSGVNGAAIRFSNIGS-TAYTLVGAG--SDAIFNGTTSNTLVLNPGDTVTLVSS 498 Query: 1258292 AASVIGGGASYDPSTGQMTGPTFSIAGGKQTNLSDAINALNQGWNVTTGGNTSGASVTAV 1258471 V+ GG+ P++G M+GP + + A A Q + G+ AS++ Sbjct: 499 GVWVMFGGSMSLPASGVMSGPGWKTQPQFDNSTKLATTAFVQRAVGSVVGSMRNASMSVP 558 Query: 1258472 QPGSTVTFNGGKNIA-LAQNGADITI----ATSDTPTFTSVGIDNGGPTLSGSGLNMAGK 1258636 ++ TF + + A GA I AT + T + G+D G SG A Sbjct: 559 TVSASATFTADEIVVETALGGAAFRIANFNATINLGTTGAGGMDTGTAPASGFVAIYAIY 618 Query: 1258637 KITN-----VATGDVSSSSKDAVNGSQL---YQTNQTVSTLGNNAASVIGGGASYD---- 1258780 TN +AT SS + + +G+ + Y + VS N++ G G D Sbjct: 619 NPTNGTTALLATNATSSVAPNVYSGANMPAGYAASALVSVWSTNSSRQFGVGFQVDRTVN 678 Query: 1258781 --------PSTGQMTGPTFSIAGGKQTNLSDAINALNQGWNVTTGGNTSGASVTAVQPG- 1258933 S Q + FS+A N N G +T + G++V+ G Sbjct: 679 LTSFSVLSTSVQQSSYAPFSVASYIPPNAKLVSGYTNCG---STAASIIGSAVSGSSTGI 735 Query: 1258934 STVTFNGGKNIALAQNGADITIATSDT 1259014 + NG + L +D+ + T T Sbjct: 736 GSAGTNGQSILTLGAPFSDVPMVTPQT 762 >ref|NP_695070.1|putative tape-measure protein Length = 657 Score = 41.2 bits (95), Expect = 0.21 Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Frame = +1 Query: 923554 AAGTFVIGVTANSVTLSQGTTSAIASGASIVFTPMVCMASQTLATSIAAASGT-NTLTFT 923730 AAGT + G+ ++ + S++ SG + ++ + T + +A G ++ Sbjct: 359 AAGTSLKGLITSAWNGIKSIISSVVSGIGGIIN-----TAKAIFTGLGSAGGALRSMISG 413 Query: 923731 PYPSARGC--AVGQGVSGTNIPIGTYVTSVSGNGNGPTVTLSNNFTG-SGIASGASITFT 923901 + R +VG +SGT I ++ +S+ G+GNG +S ++G +GI SGAS T + Sbjct: 414 AWSGIRSIISSVGGSISGTINGIKSFFSSLGGSGNGLRSVMSGVWSGITGIISGASSTIS 473 Query: 923902 G 923904 G Sbjct: 474 G 474 >ref|NP_818167.1|gp94 Length = 1277 Score = 40.8 bits (94), Expect = 0.27 Identities = 81/403 (20%), Positives = 145/403 (35%), Gaps = 34/403 (8%) Frame = +2 Query: 1258022 ERQIKNV--AGGTVGTDAVNVNQLTA---VSNSAVKYDKNPDGS----INYNSVTLNPGG 1258174 E +++++ A T V+ +QLTA +A K + DG+ + +PG Sbjct: 605 EERVEDIRDAVDTAREHGVDASQLTAGVHFRTAAPKPEVTSDGAGGKIQQTRQFSRDPGT 664 Query: 1258175 SLTTMTNLAAGDISQNSKDAVNGSQLYQTNQTVSTLGNNAASVIGGGASYDPSTGQMTGP 1258354 S++ + + ++ G + Q+ + ++ GG +DP+ + Sbjct: 665 SISDWLGVGGTPGAAGTRSNGAGQSMNQSRDSGGVQDTDSTQAKPGGGGFDPNMNDRSNR 724 Query: 1258355 TFSIAGGKQTNLSDAINALNQGW---NVTTGGNTSGASVTAVQPGSTVTFNGGKNIALAQ 1258525 S GG A N GW + + G+ +G A + G N A Sbjct: 725 PVSEGGG-------ATNGTPAGWSAADAASPGSNNGPHGAAGSATNPTPGQPGNNTPAAP 777 Query: 1258526 NGAD----ITIATSDTPTFTSVGIDNGGPTLSGSGLNMAGKKITNVAT-----GDVSS-- 1258672 A A ++TP+ T G GG G +G ++++A GD +S Sbjct: 778 GAAPKNNLAGPAGTNTPSATPPG---GGQIGQGEYQIQSGDTLSDIAQRAGYGGDYNSLA 834 Query: 1258673 SSKDAVNGSQLYQTNQ-TVSTLGNNA--------ASVIGGGASYDPSTGQMTGPTFSIAG 1258825 + + +++ + + T G A A+ GGGA + + G Sbjct: 835 QQNNIADPDKIFAGDTINIGTPGGGATTPDVDLSAATPGGGADANNTASDFAG------- 887 Query: 1258826 GKQTNLSDAINALNQGWNVTTGGNTSGASVTAVQPGSTVTFNGGKNIALAQNGADITIAT 1259005 T+ S A +A T G ++ A A Q + G + A +G+ T A Sbjct: 888 ---TSTSGATDATG-----TDNGTSTPADNAAAQTTTETNKTGRRRRQAAPSGSSATPAP 939 Query: 1259006 SDTPTFTSV--GIDNGGPTLSGSGLNMAGKKITNVAAGEVSSS 1259128 S TP + +DN G+ + N G+ SS+ Sbjct: 940 STTPDSEGLVDSMDNPAAPTGGTPASNTALSSPNNDLGDPSSA 982 >ref|YP_195258.1|hypothetical protein Length = 582 Score = 40.8 bits (94), Expect = 0.27 Identities = 97/416 (23%), Positives = 146/416 (35%), Gaps = 15/416 (3%) Frame = +2 Query: 1257587 NSSVAIGVVALSRGNTSIAIGRQSAATADFSTAIGNVAYASGVSGIAMGDSALASGYRSV 1257766 + +V++ + ++ G +I G Q+ A G SG G GD Y Sbjct: 3 SQNVSLFIQSVQTG--TIPAGAQNIVVAVAGARGGTGGADSGGPGGGYGDGR----YGLF 56 Query: 1257767 AIGSADTNLAGNDGISTGANYDPNTQTRASGARTVALGAGAVAAPDDSVALGSNSVGESN 1257946 +I S+ +N + + + P + G + GAG G + Sbjct: 57 SIPSSSSNRSWGSWVGFTGSNGPGGSSAVVGGPGGSNGAGKNGDGGRGGNDGESGWSGCG 116 Query: 1257947 AQGPAA----FSGDAIPVNGAVSVGQAGAERQIKNVAGGTVGTDAVNVNQLTAVS--NSA 1258108 A G AA +G + V G G GA G G DA N T++S N Sbjct: 117 AGGGAATVFSLAGSDVIVAGGGGGGGGGAFSCGGPERPGARGGDAGNWVNTTSISPSNGG 176 Query: 1258109 VKYDKNPDGSINYNSVTLNPGGSLTTMTNLAAGDISQNSKDA--VNGSQLYQTNQTVSTL 1258282 DK+ DG PGG + +G NGS L T+ T + + Sbjct: 177 QGGDKSGDGPGGGGGGGGAPGGGGGGVGQDCSGGAGGGGGGGSRYNGSVLSLTS-TSTNI 235 Query: 1258283 GNNAASVIGGGASYDPSTGQMT----GPTFSIAGGKQTNLSDAINALNQGWNVTTGGNTS 1258450 GN S+ SYD + ++T P IAG T ++ +Q N G + Sbjct: 236 GNGYISL-----SYDLTVAEITTFSIDPNTIIAGESATLEWSVTDSNSQSINQDIGSVAT 290 Query: 1258451 GASVTAVQPGSTVTFNGGKNIALAQNGADITIATSDTPTFTSVGIDNGGPTLSGSGLNMA 1258630 S+ V P T + + A +T+ T N P + G ++ Sbjct: 291 SGSLI-VSPSVTTDYTLTAIGDAGNDTATVTLTVYQPVVATITASPN--PVIVGQNSTLS 347 Query: 1258631 GKKITNVATGDVSSSSKDAVNGSQLYQTNQTV--STLGNNAASVIG-GGASYDPST 1258789 TGD S +S D G L+ ++ T+ ST S G GGA D T Sbjct: 348 W-----TVTGDASEASIDQGIGPVLFSSSTTISPSTTTTYTLSASGLGGADQDSVT 398 >ref|NP_996720.1|putative neck passage structure Length = 672 Score = 40.8 bits (94), Expect = 0.27 Identities = 59/262 (22%), Positives = 89/262 (33%), Gaps = 13/262 (4%) Frame = +2 Query: 1257800 NDGISTGANYDPNTQTRASGARTVALGAGAVAAPDDSVALGSNSVGESNAQGPAAFSGDA 1257979 N ++T ++ A A A A A + P + A+ ++ + + G + S Sbjct: 301 NKNVTTAQETAKQAESEAKNAMAKATEAQANSLPLNGNAVSASKLETARKLGVSLQSSAQ 360 Query: 1257980 IPVNGAVSVGQAGAERQIKNVAGGTVGTDAVNVNQLTAVSNSAVKYDKNPDGSINYNSVT 1258159 +G V G + GGT D V + Y + DG + T Sbjct: 361 QNFDGTADVTNIGVSGVLPIANGGTSTNDGVI---------DTIAYANSADGVDGFT--T 409 Query: 1258160 LNPGGSLTTMTNLAAGDISQNSKDAVNGSQLYQTNQTVSTLGNNAASVIGGGASYDPSTG 1258339 + P +L T T + GDI+ ++ S L S NN VI G D G Sbjct: 410 VYPNLNLLTNTKITQGDINSKIWASIGASSL-------SVGSNNGIKVINNGGVIDSPCG 462 Query: 1258340 QMTGPTFSIAGGKQTNLSDAINALNQGWNVTTGGNTS--------GASVTAVQPGSTVTF 1258495 FS N+ D I N T + G S + G+ V Sbjct: 463 ------FSYIKPTNVNVGDTITVSCYIKNTGTADIKNFSISIAFYGTSRSYPTKGNLVIP 516 Query: 1258496 NGGKN-----IALAQNGADITI 1258546 N GK A+ +GAD+ I Sbjct: 517 NDGKPYFFSLTAIVPSGADVAI 538 >ref|NP_818345.1|gp44 Length = 326 Score = 40.4 bits (93), Expect = 0.36 Identities = 66/250 (26%), Positives = 92/250 (36%), Gaps = 4/250 (1%) Frame = -2 Query: 571393 GGGQTTCAIP-VFVCRATGSPSYNVGDWITSLSGSSTTYGPGNFGWAALDGSTNEPTIAS 571217 GGG IP V+V R SY+V + L G+ T G G+ G+ DG ++ S Sbjct: 97 GGGAGGAKIPRVWVPREAMGSSYSV---VLGLGGAYT--GGGSTGFGGTDGGSS-----S 146 Query: 571216 ELSGNTCNITSPPDLGSTGLKSASLRAWNTRFGIYTNGANGSSGQPDFTGYAYVGPNYGP 571037 LSG+ I G+ L +S + + G T+ +G +G Sbjct: 147 FLSGSVSLIAGGGARGAIALSGSSTQV-SGGAGSLTSVTSGVAGAVVI------------ 193 Query: 571036 PGTAGIKGDAYTQFVTDRTTFKPYQGDGAPPSGSGIATNGTVTASTYQT---TGGDRRVA 570866 PG G KG A + D GD +G+G G V+ S QT GG+ V Sbjct: 194 PGAPGGKGAASSGSAEDG-------GDNPSGAGAGGGGGGRVSDSNSQTPGGRGGNSAVG 246 Query: 570865 LAPEGDCSTLNGASGKVHVTQWDCVLMLDPVPFSPGKGGIVAHLEYLGSSVSGNNPCATH 570686 E + NG+S D +PG GG G N+ T Sbjct: 247 TGGERGGAGANGSSA------------ADQTGGNPGAGG--------GGGGGNNSGSTTT 286 Query: 570685 GLPGSGSASG 570656 G G+G G Sbjct: 287 GHGGNGGKYG 296 >ref|NP_705672.2|gp49 Length = 692 Score = 40.4 bits (93), Expect = 0.36 Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Frame = +1 Query: 922192 FGVMGDGVTDDTAALQVALN--AGIPLYFPPGTYLYSNTLTATASIIG-AGWNSILQCTT 922362 FG G+G DDT LQ AL AG LY Y S+TLTA +I G G I T Sbjct: 207 FGATGNGTADDTTPLQNALTAMAGHTLYLGNNLYGISSTLTANGNIEGNGGGQGIYNATC 266 Query: 922363 SQGQNASIYWNNA-----SNFKIQNLQFYSKNAAGYYSSESAGPVNLESCSLFEISGCQV 922527 + G +A + I+N+ + AG +S G V + + + + Q Sbjct: 267 TSGIRLLAGTFDAMSLGRAGIAIRNI---CMDIAGGVTSTKGGIVEIGAHNFLVVEKSQF 323 Query: 922528 NN 922533 NN Sbjct: 324 NN 325 >ref|NP_958155.2|gp48 Length = 690 Score = 40.4 bits (93), Expect = 0.36 Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 8/122 (6%) Frame = +1 Query: 922192 FGVMGDGVTDDTAALQVAL--NAGIPLYFPPGTYLYSNTLTATASIIG-AGWNSILQCTT 922362 FG G+G DDT LQ AL AG LY Y S+TLTA +I G G I T Sbjct: 205 FGATGNGTADDTTPLQNALTATAGHTLYLGNNLYGISSTLTANGNIEGNGGGQGIYNATC 264 Query: 922363 SQGQNASIYWNNA-----SNFKIQNLQFYSKNAAGYYSSESAGPVNLESCSLFEISGCQV 922527 + G +A + I+N+ + AG +S G V + + + + Q Sbjct: 265 TSGIRLLAGTFDAMSLGRAGIAIRNI---CMDIAGGVTSTKGGIVEIGAHNFLVVEKSQF 321 Query: 922528 NN 922533 NN Sbjct: 322 NN 323 >ref|NP_892070.1|tail fiber protein Length = 690 Score = 40.4 bits (93), Expect = 0.36 Identities = 78/343 (22%), Positives = 122/343 (35%), Gaps = 19/343 (5%) Frame = -3 Query: 536136 RIGNVAAGVADTDAVNVGQLTSTVAPLQTSISTAASN-ITNLQGNVTSINTSLSTATTNI 535960 +I + G A ++G + T I+T SN IT G SL+ Sbjct: 4 KISGILPGPTGEPAAHIGITLRAIKTSLTVITTLESNSITGTDGAY-----SLNVEPGKY 58 Query: 535959 SDLKAADARNVKYDGQSGFDSVTFAGTNGTTLHNVAAGVANTDA-----VNVGQLNGGL- 535798 L D N + G S + GT L+N + D + + QL Sbjct: 59 DVLLWVDGINARRVGTINVYSDSLPGT----LNNFLTALREEDGTPEIILQLEQLRAEAV 114 Query: 535797 -SSLSTSVTNNINTTLGSLSTSINNQIGNAT----KNAVQYDDDAHSGVTLGGKGAQSPV 535633 ++L + N T ++ S + T K AV+ D D G + AQS V Sbjct: 115 RAALEAKESKNEATQQAGIAISAADNAAQETAELIKAAVKEDADRAEAARYGAETAQSTV 174 Query: 535632 ALHNVADGVATGDAVNVGQLGKATDTLNQSITNVSNSVTTLGNQVTTNTGNIAALQQDAL 535453 + +A VA + VGQL A + SNS ++ ++ A +Q AL Sbjct: 175 --NTLAAEVARHHS-EVGQLASAASNSAAEAASSSNSSAQSASESESSKNAAALSEQSAL 231 Query: 535452 QWNANLGTYDASHGGNGPQRIG-------NVAAGKNGTDAVNVDQLNAAIQDGTSQLDAL 535294 + G + G+ G A K ++++V L I SQ + Sbjct: 232 AGAEDAGNSATAAAGDKTAAKGFRDEAEEFAARAKASAESIDVSALEEQINQKVSQTEFD 291 Query: 535293 AVKYDDASKKQVSLGGGNGASPVRLTNVAEGNVAAGSTDAVNG 535165 D AS + ++ G AS +LT + AG D + G Sbjct: 292 DTIADKASNQALTDGLATKASTQQLT-----DGLAGKLDKIGG 329 >ref|NP_542529.1|hypothetical conserved protein COG330 Length = 291 Score = 40.0 bits (92), Expect = 0.47 Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 11/244 (4%) Frame = -2 Query: 561748 GEASVITRFGRPVHVLLEPGLAWRLPAPIDAV-TPVDLRLHTTSS----GLQD------V 561602 G +V+T +G +L+PG W P + V + +T +S G +D V Sbjct: 36 GNVAVVTEWGDATGEVLQPGANWITPVKHNTVELSTRQQAYTMTSNPGEGAKDYADPIVV 95 Query: 561601 GTRDGLRIIVEAYVAWRVPADARDIGRFMRAVGNEPDEAARQIRSLVGSALQTTSAGYDL 561422 T DG+ + V +++P D + F + R IR+ + + T+ G Sbjct: 96 KTADGVEATFDVTVRYQLPNDPEAVTDFYTDYRTLENAEKRMIRTTLAKQMLVTT-GSMK 154 Query: 561421 ASLVNTDPAQVKIGEFEEALRRQIDAQLYAAYGVRVAQVGLERLTLPAVTLAATVDRMSA 561242 S V T Q E R Q++ + +A G+ + V + ++ P + ++ Sbjct: 155 TSEVYTSAGQT---EITMDARSQLE-EKFADTGLVLDSVQITKVNFP-----QSYEKSIT 205 Query: 561241 ERETVAAQRTADGNREAAQIRSDAERDARIALADANVKAAGIEAQSRKDAADIYGKSYAG 561062 E+E VA QR +++++AE + A A ++ A EA+S +I +S Sbjct: 206 EKE-VAQQR---------ELKAEAEVEVAKQEARAQIEKARGEAKSN----EIVAQSVRN 251 Query: 561061 NPHL 561050 NP L Sbjct: 252 NPEL 255 >ref|NP_835695.1|hypothetical protein Length = 279 Score = 40.0 bits (92), Expect = 0.47 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Frame = +1 Query: 460123 PRVAMFGITNKCNLSCDFC-SRDTRRDSAWSVQSAAEVLRGLSEAGTLEVAFGGGEPFAF 460299 P + +N CN C FC T S R L+E GT E++ GGG+P F Sbjct: 7 PHIVDVKPSNVCNFGCAFCYENSTPEGSECDPGDMIRFARMLNEMGTYELSIGGGDPCFF 66 Query: 460300 ---RGFAELIDILHDTTPLALNVTT-NGTLIRR 460386 R EL I+ + +NVTT N + R+ Sbjct: 67 WKGRFLEELYRIVKTFSRGYVNVTTFNASFARK 99 Database: Phage.aa Posted date: Jul 11, 2005 10:35 AM Number of letters in database: 3,019,461 Number of sequences in database: 14,420 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,898,048,959 Number of Sequences: 14420 Number of extensions: 118171184 Number of successful extensions: 435790 Number of sequences better than 0.5: 85 Number of HSP's better than 0.5 without gapping: 14153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 434858 length of database: 3,019,461 effective HSP length: 138 effective length of database: 1,029,501 effective search space used: 478606778892 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig23 (3,694,077 letters) Database: Phage.aa 14,420 sequences; 3,019,461 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_006543.1|Ban 467 e-129 ref|YP_024966.1|putative primase 423 e-116 ref|NP_050964.1|hypothetical protein 375 e-101 ref|NP_795382.1|putative DNA polymerase III delta prime subunit 350 5e-94 ref|NP_932363.1|hypothetical protein 340 3e-91 ref|NP_945090.1|gp59 336 8e-90 ref|NP_817564.1|gp117 332 1e-88 ref|NP_818503.1|gp203 322 1e-85 ref|YP_024945.1|gp25 290 6e-76 ref|YP_024938.1|gp18 286 5e-75 ref|NP_061570.1|Orf74 282 1e-73 ref|NP_536389.1|conserved hypothetical protein 265 1e-68 ref|NP_945063.1|gp32 265 1e-68 ref|NP_818250.1|gp199 252 1e-64 ref|NP_958219.1|gene 44 protein 238 2e-60 ref|NP_037693.1|gene P protein 238 2e-60 ref|NP_859372.1|P protein 238 3e-60 ref|NP_859206.1|P protein 238 3e-60 ref|NP_050526.1|similar to P protein of bacteriophage HK022 238 3e-60 ref|NP_720303.1|gp12 237 4e-60 ref|NP_112058.1|replication protein P 237 5e-60 ref|NP_690733.1|DNA helicase 236 6e-60 ref|YP_195185.1|ribonucleotide reductase A subunit 231 3e-58 ref|NP_852741.1|putative DNA replication protein P 228 2e-57 ref|NP_690734.1|hypothetical protein 210 6e-52 ref|NP_899523.1|aerobic ribonucleoside diphosphate reductase lar... 208 2e-51 ref|NP_803780.1|ORF214 206 1e-50 ref|NP_049845.1|NrdA aerobic NDP reductase, large subunit 201 3e-49 ref|NP_037740.1|Gp55 199 1e-48 ref|NP_059611.1|Hypothetical protein 197 4e-48 ref|NP_944246.1|putative single-strand DNA binding protein 197 4e-48 ref|NP_891805.1|aerobic NDP reductase large subunit 196 1e-47 ref|NP_861929.1|NrdA aerobic NDP reductase, large subunit 194 3e-47 ref|NP_543071.1|putative helicase 193 6e-47 ref|YP_006384.1|gp12 193 8e-47 ref|NP_818618.1|gp80 184 4e-44 ref|YP_006476.1|Res 184 4e-44 ref|NP_049848.1|dTMP (thymidylate) synthase 173 7e-41 ref|NP_861931.1|dTMP (thymidylate) synthase 170 6e-40 ref|NP_944201.1|dTMP synthase 168 3e-39 ref|NP_040655.1|unknown protein 167 4e-39 ref|YP_024510.1|putative ribonucleotide reductase large subunit 165 2e-38 ref|NP_612864.1|putative helicase 165 2e-38 ref|NP_932561.1|dTMP (thymidylate) synthase 165 2e-38 ref|NP_542569.1|ribonucleotide reductase 162 2e-37 ref|NP_803269.1|helicase DnaB 161 3e-37 ref|NP_817531.1|gp82 160 6e-37 ref|NP_046685.1|putative DNA polymerase 157 5e-36 ref|NP_758903.1|ORF10 153 9e-35 ref|NP_059582.1|O-antigen conversion protein 151 3e-34 ref|NP_720276.1|GtrB 150 5e-34 ref|YP_006358.1|GtrB 150 5e-34 ref|NP_944991.1|putative ribonucleoside triphosphate reductase a... 150 5e-34 ref|YP_006920.1|putative thymidylate synthase 149 1e-33 ref|NP_944186.1|hypothetical protein 148 2e-33 ref|NP_599056.1|bactoprenol glucosyltransferase 147 7e-33 ref|YP_164278.1|RdgC exonuclease 147 7e-33 ref|YP_164279.1|single-stranded DNA-binding protein 144 4e-32 ref|NP_958203.1|gene 27 protein 142 1e-31 ref|YP_006924.1|putative aerobic ribonucleoside diphosphate redu... 139 1e-30 ref|NP_899371.1|GTP cyclohydrolase I family protein 139 2e-30 ref|YP_006536.1|HrdC 138 3e-30 ref|NP_899279.1|dTMP (thymidylate) synthase 137 7e-30 ref|YP_006485.1|Ssb 136 9e-30 ref|NP_945089.1|gp58 133 1e-28 ref|NP_932465.1|hypothetical protein 132 2e-28 ref|NP_932362.1|topoisomerase II large subunit 130 6e-28 ref|NP_861694.1|gp60plus39 large subunit topoisomerase II 130 8e-28 ref|NP_891577.1|topoisomerase II large subunit 127 7e-27 ref|NP_899293.1|topoisomerase II large subunit 127 7e-27 ref|NP_597931.1|PhoH-like protein 126 9e-27 ref|NP_803872.1|ORF306 126 9e-27 ref|NP_943927.1|NrdA-A aerobic NDP reductase large subunit 126 9e-27 ref|YP_006944.1|NAD-dependent DNA ligase, subunit A 124 6e-26 ref|YP_006926.1|putative PhoH-like protein 124 6e-26 ref|NP_944928.1|putative thymidylate synthase 123 1e-25 ref|NP_943883.1|topoisomerase II large subunit 120 5e-25 ref|NP_046713.1|ribunucleotide reductase large subunit 118 3e-24 ref|NP_046572.1|ABC transporter 115 2e-23 ref|NP_039614.1|gene IV product 115 3e-23 ref|NP_049621.1|gp39 topoisomerase II, large subunit, N-terminal... 113 1e-22 ref|NP_040579.1|G IV protein 111 3e-22 ref|NP_047359.1|maturation protein 110 7e-22 ref|NP_899539.1|PhoH domain protein 110 7e-22 ref|NP_073695.1|neck appendage protein precursor 110 7e-22 ref|NP_861955.1|gp52 topoisomerase II, medium subunit 110 9e-22 ref|NP_049875.1|gp52 topoisomerase II, medium subunit 109 2e-21 ref|YP_024947.1|gp27 109 2e-21 ref|NP_047372.1|putative maturation protein 107 4e-21 ref|YP_024677.1|gp04 105 2e-20 ref|YP_024921.1|gp01 103 8e-20 ref|YP_006919.1|putative RNaseH ribonuclease 103 1e-19 ref|YP_195186.1|ribonucleotide reductase B subunit 102 2e-19 ref|NP_944225.1|gp52 topoisomerase II medium subunit 101 3e-19 ref|NP_932596.1|topoisomerase II medium subunit 100 7e-19 ref|NP_510894.1|phage assembly protein 100 9e-19 ref|NP_944363.1|gp54 100 9e-19 ref|NP_943888.1|hypothetical protein 99 2e-18 ref|NP_899269.1|deoxyuridine 5'-triphosphate nucleotidohydrolase 99 2e-18 ref|NP_665964.1|putative plasmid partitioning protein Soj 99 3e-18 ref|NP_705675.1|gp52 98 4e-18 ref|NP_958158.2|gp51 98 4e-18 ref|YP_006959.1|putative deoxyUTP pyrophosphatase 97 6e-18 ref|NP_891806.1|dTMP (thymidylate) synthase 96 2e-17 ref|YP_044791.1|RepB 94 7e-17 ref|NP_891840.1|topoisomerase medium subunit 94 9e-17 ref|NP_943772.1|predicted amidase 94 9e-17 ref|NP_817502.1|gp53 92 3e-16 ref|NP_818300.1|gp250 92 3e-16 ref|NP_047257.1|putative replication protein RepB 92 3e-16 ref|NP_899529.1|topoisomerase II small subunit 92 3e-16 ref|NP_543069.1|hypothetical protein 90 1e-15 ref|NP_943827.1|gp49 89 3e-15 ref|NP_076827.1|Csp 89 3e-15 ref|YP_024521.1|putative DNA repair protein 84 5e-14 ref|NP_817764.1|gp3 84 5e-14 ref|YP_006585.1|putative head maturation protease 84 5e-14 ref|YP_195193.1|hypothetical protein 84 7e-14 ref|NP_536361.1|putative capsid assembly protein 84 7e-14 ref|NP_795485.1|putative cell wall hydrolase 84 9e-14 ref|NP_795423.1|putative cell wall amidase 84 9e-14 ref|NP_818252.1|gp201 83 2e-13 ref|NP_803570.1|ORF004 82 2e-13 ref|NP_108727.1|minor structural protein 3 82 2e-13 ref|NP_690772.1|ORF39 82 2e-13 ref|YP_164334.1|integrase 82 3e-13 ref|NP_046614.1|histone-like prokaryotic DNA-binding protein family 82 3e-13 ref|NP_612844.1|Gp15 protein 82 3e-13 ref|NP_899299.1|conserved hypothetical protein 82 3e-13 ref|NP_112710.1|ORF47 82 3e-13 ref|NP_076626.1|endopeptidase 82 3e-13 ref|NP_943925.1|NrdA-B aerobic NDP reductase large subunit 82 3e-13 ref|NP_861819.1|NudE nudix hydrolase 81 4e-13 ref|NP_899524.1|aerobic ribonucleoside diphosphate reductase sma... 81 4e-13 ref|NP_663686.1|structural protein 81 6e-13 ref|NP_599071.1|replication protein 80 8e-13 ref|YP_164688.1|recombinase A 80 8e-13 ref|NP_041971.1|Hypothetical protein 80 8e-13 ref|NP_861745.1|RB69ORF055c hypothetical protein 79 2e-12 ref|NP_700415.1|putative replication protein 79 3e-12 ref|NP_112675.1|SSB 78 5e-12 ref|YP_195230.1|PhoH 78 5e-12 ref|NP_758949.1|ORF58 77 6e-12 ref|NP_803680.1|ORF114 77 6e-12 ref|YP_164702.1|orf67 77 6e-12 ref|NP_438163.1|cell wall hydrolase 77 8e-12 ref|NP_795599.1|putative cell wall hydrolase, lysin 77 8e-12 ref|NP_049737.1|NudE nudix hydrolase 77 8e-12 ref|NP_046877.1|putative non-heme haloperoxidase 77 1e-11 ref|NP_041994.1|Hypothetical protein 76 1e-11 ref|NP_076587.1|SSB protein 76 2e-11 ref|NP_046900.1|gp5 75 2e-11 ref|NP_463525.1|putative SSB protein 75 2e-11 ref|NP_848293.1|protein 7.7 75 4e-11 ref|NP_046584.1|putative transglycosylase 75 4e-11 ref|NP_943924.1|NrdB aerobic NDP reductase small subunit 75 4e-11 ref|NP_108692.1|single-strand binding protein 74 5e-11 ref|NP_438126.1|single-strand binding protein 73 1e-10 ref|NP_795558.1|putative single-strand DNA-binding protein 73 1e-10 ref|NP_058484.1|ssDNA binding protein 73 1e-10 ref|NP_046569.1|IMPB 73 1e-10 ref|NP_040584.1|capsid component 73 1e-10 ref|NP_038310.1|ORF9 73 2e-10 ref|NP_848228.1|tail fiber 72 2e-10 ref|NP_695158.1|minor capsid protein 72 2e-10 ref|NP_852553.1|hypothetical protein 72 2e-10 ref|NP_835537.1|single-strand DNA-binding protein 72 3e-10 ref|NP_817477.1|gp27 72 4e-10 ref|NP_599074.1|unknown 71 5e-10 ref|NP_918994.1|putative head-tail preconnector protein 71 5e-10 ref|NP_892074.1|partitioning protein SpyA 71 5e-10 ref|NP_892049.1|capsid protein 71 6e-10 ref|NP_803721.1|ORF155 70 8e-10 ref|NP_817947.1|gp96 70 8e-10 ref|NP_150144.1|putative SSB protein 70 1e-09 ref|NP_046923.1|gp28 70 1e-09 ref|NP_899372.1|exsB protein 69 2e-09 ref|NP_061608.1|single strand DNA binding protein 68 4e-09 ref|NP_818228.1|gp169 68 4e-09 ref|YP_024453.1|putative PhoH-related protein 68 5e-09 ref|YP_164721.1|orf86 68 5e-09 ref|YP_006605.1|Gp25 68 5e-09 ref|NP_076649.1|SSB 68 5e-09 ref|NP_817650.1|gp61 67 7e-09 ref|NP_612868.1|putative single stranded DNA binding protein 67 7e-09 ref|NP_663648.1|putative single stranded binding protein 67 9e-09 ref|YP_006922.1|putative aerobic ribonucleoside diphosphate redu... 67 9e-09 ref|NP_945016.1|unknown 67 9e-09 ref|NP_945015.1|unknown 67 9e-09 ref|NP_817907.1|gp56 67 1e-08 ref|NP_817998.1|gp25 67 1e-08 ref|NP_042035.1|integrase 66 1e-08 ref|NP_944889.1|unknown 66 1e-08 ref|NP_944888.1|unknown 66 1e-08 ref|NP_076815.1|helicase 66 1e-08 ref|NP_817552.1|gp103 66 2e-08 ref|NP_891801.1|aerobic NDP reductase small subunit 66 2e-08 ref|NP_932589.1|hypothetical protein 66 2e-08 ref|NP_061531.1|integrase 65 3e-08 ref|NP_046714.1|unknown 65 3e-08 ref|NP_064752.1|RPprimase 65 4e-08 ref|NP_108702.1|dUTPase 64 6e-08 ref|NP_996693.1|dUTPase 64 6e-08 ref|NP_076719.1|dUTPase 64 6e-08 ref|NP_049841.1|NrdB aerobic NDP reductase, small subunit 64 7e-08 ref|NP_944256.1|conserved phage protein 64 7e-08 ref|NP_795404.1|head maturation protease 64 1e-07 ref|NP_803396.1|tail length tape measure protein 64 1e-07 ref|NP_112684.1|DUT 64 1e-07 ref|NP_695048.1|dUTPase 64 1e-07 ref|NP_076600.1|dUTPase 64 1e-07 ref|NP_663658.1|putative dUTPase 63 1e-07 ref|NP_058454.1|orf 16 63 2e-07 ref|NP_958192.1|gene 16 protein 63 2e-07 ref|YP_006528.1|ParA 63 2e-07 ref|NP_047360.1|ORF348; homologous to eryA gene product in L07626 62 2e-07 ref|NP_061640.1|phi PVL ORF 15 and 16 homologue 62 3e-07 ref|YP_195243.1|hypothetical protein 62 3e-07 ref|NP_803754.1|ORF188 62 4e-07 ref|NP_690702.1|amidase 62 4e-07 ref|NP_076663.1|dUTPase 62 4e-07 ref|NP_848235.1|integrase 61 5e-07 ref|NP_542557.1|deaminase protein deoxycytidine triphosphate-lik... 61 6e-07 ref|NP_803801.1|ORF235 60 8e-07 ref|NP_040700.1|hypothetical protein 60 8e-07 ref|NP_112034.1|integrase 60 8e-07 ref|NP_050160.1|hypothetical protein 60 1e-06 ref|NP_690729.1|SSB protein 60 1e-06 ref|NP_848276.1|protein 7.7 60 1e-06 ref|NP_835555.1|hypothetical protein, similar to scaffolding pro... 60 1e-06 ref|NP_542261.1|unknown 60 1e-06 ref|YP_006961.1|L-shaped tail fiber protein 60 1e-06 ref|NP_046936.1|gp41 59 2e-06 ref|NP_665963.1|putative site specific recombinase Int2 59 2e-06 ref|NP_958266.1|hypothetical protein 59 2e-06 ref|NP_061501.1|ClpP protease 59 3e-06 ref|NP_817551.1|gp102 59 3e-06 ref|YP_195169.1|RecA-like recombination protein 59 3e-06 ref|NP_803278.1|dUTPase 58 4e-06 ref|NP_818239.1|gp188 58 4e-06 ref|NP_075512.2|hypothetical protein 58 5e-06 ref|NP_075481.1|ssDNA binding protein 58 5e-06 ref|NP_052288.1|hypothetical protein 58 5e-06 ref|NP_536385.1|conserved hypothetical protein 58 5e-06 ref|NP_945059.1|gp28 58 5e-06 ref|NP_835564.1|hypothetical protein 57 7e-06 ref|NP_803346.1|tail fiber protein 57 7e-06 ref|NP_058491.1|dUTPase 57 7e-06 ref|NP_818206.1|gp133 57 7e-06 ref|NP_958615.1|77ORF001 57 7e-06 ref|NP_075491.1|phi PVL ORF 53 analogue 57 1e-05 ref|NP_817358.1|gp20 57 1e-05 ref|YP_164769.1|orf134 57 1e-05 ref|NP_958252.1|hypothetical protein 57 1e-05 ref|NP_958605.1|77ORF015 57 1e-05 ref|YP_164437.1|lysin 57 1e-05 ref|NP_758917.1|ORF24 56 2e-05 ref|YP_077226.1|dUTPase 56 2e-05 ref|NP_818251.1|gp200 56 2e-05 ref|NP_818340.1|gp39 56 2e-05 ref|YP_024511.1|putative ribonucleotide reductase minor subunit 55 3e-05 ref|NP_050150.1|ClpP-like protease 55 3e-05 ref|NP_958229.1|gene 55 protein 55 3e-05 ref|NP_705641.1|gp15 55 3e-05 ref|NP_958120.1|gp15 55 3e-05 ref|NP_839925.1|putative ClpP protease 55 3e-05 ref|NP_076678.1|protease 55 3e-05 ref|NP_046786.1|Int 55 4e-05 ref|NP_958719.1|Bbp50 54 6e-05 ref|NP_996610.1|integrase 54 6e-05 ref|NP_996659.1|integrase 54 6e-05 ref|NP_878228.1|Int 54 6e-05 ref|NP_839878.1|Int 54 6e-05 ref|NP_075503.1|protease 54 8e-05 ref|NP_803338.1|scaffolding protease 54 8e-05 ref|NP_817615.1|gp26 54 8e-05 ref|NP_052286.1|hypothetical protein 54 8e-05 ref|YP_006619.1|Gp39 54 8e-05 ref|NP_944045.1|hypothetical protein 54 8e-05 ref|NP_052278.1|Int 54 1e-04 ref|NP_932394.1|DNA polymerase accessory protein 53 1e-04 ref|NP_052088.1|helicase 53 2e-04 ref|NP_052087.1|DNA primase 53 2e-04 ref|NP_795396.1|site-specific recombinase 52 2e-04 ref|NP_775217.1|primase 52 2e-04 ref|NP_523316.1|helicase 52 2e-04 ref|NP_523315.1|DNA primase 52 2e-04 ref|NP_777327.1|hypothetical protein 52 3e-04 ref|NP_858955.1|protease of the ClpP family 52 4e-04 ref|NP_049656.2|UvsX RecA-like recombination protein 52 4e-04 ref|YP_164394.1|DEAD box family helicase 52 4e-04 ref|NP_795465.1|putative ClpP protease ATP-dependent protease pr... 51 5e-04 ref|YP_024782.1|p54 51 5e-04 ref|NP_116498.1|putative ATP-dependent ClpP protein 51 5e-04 ref|NP_932562.1|dihydrofolate reductase 51 5e-04 ref|NP_040813.1|integrase 51 5e-04 ref|NP_046842.1|minor tail subunit 51 6e-04 ref|NP_536628.1|Int 51 6e-04 ref|NP_932523.1|hypothetical protein 51 6e-04 ref|NP_958506.1|putative integrase 50 8e-04 ref|NP_064745.1|gp7 50 0.001 ref|NP_690774.1|ORF41 50 0.001 ref|YP_025041.1|putative transposase B 50 0.001 ref|NP_445687.1|putative helicase 50 0.001 ref|NP_038326.1|ORF25 50 0.001 ref|NP_542283.1|putative DNA methylase 50 0.001 ref|NP_803812.1|ORF246 50 0.001 ref|NP_958678.1|Bbp9 50 0.001 ref|NP_996571.1|hypothetical protein predicted by GeneMark 50 0.001 ref|NP_996619.1|hypothetical protein predicted by GeneMark 50 0.001 ref|NP_046717.1|putative dUTPase 50 0.001 ref|NP_848279.1|primase 49 0.002 ref|YP_053020.1|hypothetical protein 49 0.002 ref|YP_024424.1|tail fiber 49 0.002 ref|NP_813780.1|internal virion protein D 49 0.002 ref|NP_041977.1|helicase 49 0.002 ref|NP_041975.1|DNA primase 49 0.002 ref|YP_077258.1|Nucleoside-diphosphate-sugar epimerase 49 0.002 ref|NP_569764.1|hypothetical protein 49 0.002 ref|NP_536807.1|integrase 49 0.002 ref|NP_944229.1|NudE nudix hydrolase 49 0.002 ref|YP_024964.1|putative prophage repressor protein 49 0.003 ref|NP_848303.1|internal virion protein 48 0.004 ref|YP_024488.1|putative glycerophosphoryl diester phosphodieste... 48 0.004 ref|NP_817941.1|gp90 48 0.004 ref|NP_891809.1|dihydrofolate reductase 48 0.004 ref|YP_006945.1|NAD-dependent DNA ligase, subunit B 48 0.004 ref|NP_523341.1|internal virion protein D 48 0.004 ref|NP_612875.1|putative recombinase 48 0.004 ref|NP_690787.1|immunity repressor 48 0.004 ref|NP_899254.1|dihydrofolate reductase 48 0.004 ref|YP_024499.1|putative helicase 48 0.005 ref|NP_046573.1|putative thioredoxin 48 0.005 ref|NP_817766.1|gp5 47 0.007 ref|NP_043466.1|integrase 47 0.007 ref|NP_042004.1|internal virion protein D 47 0.007 ref|NP_958084.1|gp27 47 0.007 ref|YP_024985.1|putative integrase 47 0.009 ref|YP_024428.1|integrase 47 0.009 ref|NP_958267.1|hypothetical protein 47 0.009 ref|NP_052116.1|internal virion protein D 47 0.009 ref|NP_510895.1|similar to phage phi 11 integrase 47 0.009 ref|NP_859396.1|hypothetical protein 47 0.012 ref|NP_813761.1|putative primase 47 0.012 ref|NP_536425.1|putative helix-turn-helix transcriptional regulator 47 0.012 ref|NP_945111.1|gp80 47 0.012 ref|NP_695118.1|putative tail protein 46 0.016 ref|NP_049395.1|putative scaffolding protein 46 0.016 ref|NP_075464.1|integrase 46 0.016 ref|NP_803307.1|integrase 46 0.016 ref|NP_058467.1|integrase 46 0.016 ref|YP_006479.1|DarB 46 0.016 ref|NP_046564.1|unknown 46 0.016 ref|NP_536415.1|putative chromosome partitioning protein 46 0.016 ref|NP_996677.1|phage repressor 46 0.016 ref|YP_025030.1|putative ClpP-like protease 46 0.016 ref|NP_817765.1|gp4 46 0.021 ref|YP_164732.1|orf97 46 0.021 ref|NP_958548.1|putative protein 46 0.021 ref|NP_944303.1|conserved phage mega protein 46 0.021 ref|YP_006930.1|putative Sir2-like protein 46 0.021 ref|YP_195157.1|sliding clamp loader gp44 46 0.021 ref|NP_835609.1|hypothetical protein 46 0.021 ref|NP_958623.1|77ORF007 46 0.021 ref|NP_039690.1|predicted 86.4kd protein; 52Kd observed 45 0.027 ref|NP_944929.1|putative dihydrofolate reductase 45 0.027 ref|NP_945240.1|integrase 45 0.027 ref|NP_040733.1|morphogenesis protein B 45 0.027 ref|NP_795660.1|putative integrase 45 0.035 ref|NP_150133.1|integrase 45 0.035 ref|NP_061591.2|integrase 45 0.035 ref|NP_818403.1|gp105 45 0.035 ref|NP_817639.1|gp50 45 0.035 ref|NP_043468.1|hypothetical protein 45 0.035 ref|NP_049618.1|gp60 topoisomerase II, large subunit, C-terminal... 45 0.035 ref|NP_958698.1|Bbp29 45 0.035 ref|NP_996591.1|primase 45 0.035 ref|NP_996639.1|primase 45 0.035 ref|NP_624303.1|integrase fragment 45 0.035 ref|NP_050999.1|P38 45 0.035 ref|NP_108682.1|cI2009 45 0.046 ref|NP_536395.1|ISBt3 transposase subunit protein 45 0.046 ref|NP_438114.1|integrase-like protein 44 0.060 ref|NP_795541.1|putative integrase 44 0.060 ref|NP_835536.1|hypothetical protein 44 0.060 ref|NP_803254.1|integrase 44 0.079 ref|NP_570328.1|RP primase 44 0.079 ref|NP_046574.1|unknown 44 0.079 ref|NP_695029.1|Integrase 44 0.079 ref|NP_945099.1|gp68 44 0.079 ref|NP_996675.1|integrase 44 0.079 ref|NP_040602.1|Tail fiber protein 44 0.079 ref|NP_777346.1|hypothetical protein 44 0.079 ref|YP_003955.1|hypothetical protein 44 0.079 ref|NP_818244.1|gp193 44 0.10 ref|NP_958209.1|gene 33 protein 44 0.10 ref|NP_944326.1|gp18 44 0.10 ref|NP_958254.1|hypothetical protein 44 0.10 ref|YP_006865.1|putative thioredoxin 44 0.10 ref|NP_049970.1|Predicted clp-protease 43 0.13 ref|NP_049828.1|Cd dCMP deaminase 43 0.13 ref|NP_835731.1|similar to RNA polymerase ECF-type sigma factor 43 0.13 ref|NP_758430.1|hypothetical protein 43 0.18 ref|YP_164282.1|hypothetical protein 43 0.18 ref|YP_164711.1|orf76 43 0.18 ref|NP_108680.1|integrase 43 0.18 ref|NP_076573.1|integrase 43 0.18 ref|NP_665958.1|putative glutaminase 42 0.23 ref|NP_438136.1|hypothetical protein 42 0.23 ref|NP_795571.1|hypothetical protein 42 0.23 ref|NP_795429.1|putative integrase 42 0.23 ref|NP_862840.1|gp1 42 0.23 ref|NP_061549.1|Orf53 42 0.23 ref|NP_818008.1|gp35 42 0.23 ref|NP_116524.1|integrase 42 0.23 ref|NP_943898.1|gp44 clamp loader subunit 42 0.23 ref|NP_049421.1|putative helicase 42 0.30 ref|NP_835566.1|hypothetical protein 42 0.30 ref|NP_958546.1|putative protein 42 0.30 ref|YP_024939.1|gp19 42 0.30 ref|NP_943919.1|NrdD anaerobic NTP reductase large subunit 42 0.30 ref|NP_932464.1|hypothetical protein 42 0.30 ref|NP_058483.1|orf 44 42 0.39 ref|NP_046865.1|putative ribonucleotide reductase 42 0.39 ref|NP_839899.1|hypothetical protein 42 0.39 ref|YP_024951.1|putative DNA polymerase III protein 42 0.39 ref|NP_958680.1|Bbp11 42 0.39 ref|NP_996573.1|hypothetical protein predicted by GeneMark 42 0.39 ref|NP_996621.1|hypothetical protein predicted by GeneMark 42 0.39 ref|YP_006616.1|Gp36 42 0.39 ref|NP_695147.1|integrase 42 0.39 ref|NP_046933.1|gp38 42 0.39 >ref|YP_006543.1|Ban Length = 454 Score = 467 bits (1202), Expect = e-129 Identities = 245/445 (55%), Positives = 323/445 (72%), Gaps = 2/445 (0%) Frame = -2 Query: 2365253 LKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTRPAD 2365074 L+ P+S+ AEQ+VLGGL+LDN WD +AD + DFY HR I+ + RL++ +P D Sbjct: 6 LESMPNSLSAEQAVLGGLMLDNCRWDEVADRIVADDFYTSAHREIFSEMERLLSHGKPID 65 Query: 2365073 VVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVADEIS 2364894 ++T+ EAL +GK + GG AYL +++NTPS+ANI YA+IVR+RAV+R ++SVA+EI+ Sbjct: 66 LITLAEALEQNGKLERAGGFAYLAEMSKNTPSSANICAYADIVRERAVVREMISVANEIA 125 Query: 2364893 ADAFNPQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPS 2364714 + G+ +LLD AE +VF IAE + G +I +L V RI+ L+ P Sbjct: 126 EAGYAQDGRGSNELLDMAERRVFEIAEKRQKSGSGPKDIASILDATVSRIEELFQ--RPH 183 Query: 2364713 D-VTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSM 2364537 D VTG TGF DL++ T+G+ +LIIVA RPSMGKT F+MN+ E AV PV VFS+ Sbjct: 184 DGVTGLDTGFTDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAVRNDKPVLVFSL 243 Query: 2364536 EMPGTQLVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQ-LFIDETGGLNPM 2364360 EMP QL+MR L S+ R+DQ R+RTG+L DEDW +++ A+ + + Q +FID++ L P Sbjct: 244 EMPSHQLMMRSLASLARVDQTRIRTGQLNDEDWARVSGAMGILLDKQNIFIDDSSALTPT 303 Query: 2364359 ELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVIA 2364180 ELRSRARR+ ++ G L +I++DYLQLM +NR EI+EISRSLK+LAKEL VPV+A Sbjct: 304 ELRSRARRVYKENGGLSMIMIDYLQLMRVPELQDNRTLEIAEISRSLKALAKELQVPVVA 363 Query: 2364179 LSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEIIIGKQ 2364000 LSQLNR LEQR +KRPV SDLRESGAIEQDAD+I+F+YRDEVY+PDS KG AE+IIGKQ Sbjct: 364 LSQLNRSLEQRADKRPVNSDLRESGAIEQDADLIMFLYRDEVYHPDSEMKGIAEVIIGKQ 423 Query: 2363999 RNGPIGPVRLTFLGQYTKFDNFAGA 2363925 RNGPIG VRL F GQY++FDN+AGA Sbjct: 424 RNGPIGTVRLAFNGQYSRFDNYAGA 448 >ref|YP_024966.1|putative primase Length = 888 Score = 423 bits (1088), Expect = e-116 Identities = 216/326 (66%), Positives = 249/326 (76%), Gaps = 4/326 (1%) Frame = -2 Query: 2884163 LVAALAPIVSRVRTSTCCIKRDGATSNINRPLTNERLAHHVNGGPAYGVYPMQPGSDVTL 2883984 LVAALAPIV+RV TS C IKRDG S+INRPLT ERLAHHVNGGPAYG ++PG+ T Sbjct: 40 LVAALAPIVARVVTSHCWIKRDGPPSHINRPLTAERLAHHVNGGPAYGAAQIEPGASTTR 99 Query: 2883983 IALLDLDSHKGETPWHEMQDTAVRIVTVASAAGLNGIPFRSSGGAGIHIYFLWDEPQDAY 2883804 IA LDLDSHKGETPW +MQD AVRI+ AAGL IPFRSSGGAG+HIY LWDEPQDAY Sbjct: 100 IACLDLDSHKGETPWPDMQDVAVRIMARLEAAGLRPIPFRSSGGAGLHIYVLWDEPQDAY 159 Query: 2883803 SARQALRSILAAVDLHDGTKGVAAGQVEIFPKQDSVSHNGYGNMFLLPLAGKSVPLDSFE 2883624 S R ALR+ LAA +L DGTKG+AAGQVE+FPKQ+SV +G+GNMF+LPLAGKSVPLDSFE Sbjct: 160 SVRCALRAALAACELRDGTKGIAAGQVEVFPKQNSVPSDGFGNMFVLPLAGKSVPLDSFE 219 Query: 2883623 LDDMPKAYVTEMDWPSSAPVPRAEREIXXXXXXXXXXAEFGALKSALDAIPNGGENELDY 2883444 LDDMPK + EMDWPSSA VP RE E +KSALD IPN G +ELDY Sbjct: 220 LDDMPKTFAAEMDWPSSAAVPLVAREEIVMPGTADVPVELELIKSALDMIPNAGVDELDY 279 Query: 2883443 DSWRNVLFGVHHASQGSDEGLALVHEFSARSSKYDPA-KTERDWGYAGK---NQGTPITI 2883276 ++WR+V+FG+HHA++GSD+GLAL HEFSARSSKY+P ER W + GK ++ PIT Sbjct: 280 EAWRDVVFGIHHAARGSDDGLALAHEFSARSSKYNPRFLDERVWPHIGKTGTDERAPITG 339 Query: 2883275 GTIKAMAAAHGWQDPAREPSEDDFDV 2883198 TI +A AHGWQ EP EDDF+V Sbjct: 340 RTILHLARAHGWQ----EPIEDDFEV 361 >ref|NP_050964.1|hypothetical protein Length = 752 Score = 375 bits (962), Expect = e-101 Identities = 215/528 (40%), Positives = 309/528 (58%), Gaps = 11/528 (2%) Frame = -2 Query: 2883506 FGALKSAL--DAIPNGGENELDYDSWRNV--LFGVHHASQGSDEGLALVHEFSARSSKYD 2883339 F L+SAL I N EN Y SW ++ ++ DE + ++S+ ++K D Sbjct: 233 FEDLRSALWYPKILNRAEN---YPSWVDMGNRLAWFKDTRFEDEAKTMWLDWSSAAAKGD 289 Query: 2883338 PAKTERDWGYAGKNQGTPITIGTIKAMAAAHGWQDPARE------PSEDDFDVVPVDEQE 2883177 E W ++ I ++A GW +P E + D FD + + Sbjct: 290 IEAAEAKWAELRADR---TGYQAIFSLAQKAGWVNPGAERLKTAVATVDAFDDLTDPTEN 346 Query: 2883176 PPRPGYRRNG-KGEILALAENIVTAVRAPHECGWHIRYDDFRAEVMLADVADPRGLRAFT 2883000 P ++RN G+I A +N AV + G IR+D FR E+M A V + + FT Sbjct: 347 SKWPTFKRNKTSGQIEATIDNAAKAVMCANFVGVEIRFDTFRDEIMFAPVGT-KEWQTFT 405 Query: 2882999 DPDYTRLQIQLERRGFLKLSKEALRDGVGLVADDNRIDSAVEWLAGLQHDGVPRIETFLR 2882820 D DY+RL+I +E+RGF + +E +RD V L A +N DSA+EWL L+ DG+PRIETF Sbjct: 406 DADYSRLRITMEKRGFRAVGRELIRDVVLLAAVENPFDSAMEWLKSLEWDGIPRIETFYH 465 Query: 2882819 DYMAVEDTPYARAVSRYLWTALAGRVLSPGCEAPMVPVLIGEQGAGKTRAVKALVPAQEF 2882640 ++ EDT Y RAVSRY+WTALAGRVL PG +A MVP+L+G QG+GK+ V AL P F Sbjct: 466 THLGTEDTAYTRAVSRYMWTALAGRVLKPGIKADMVPILVGAQGSGKSSGVAALSPDPTF 525 Query: 2882639 YCELKLDERDDNASRMMRGRLVVELGELRGLHTRDAESIKAFISRTHENFVPKYKEFSVT 2882460 + E+ E+DD+ +R MRG LV E+ ELRGL+T++ ESIKAF++RTHE ++PK+KEF+ Sbjct: 526 FTEISFAEKDDDLARKMRGCLVAEISELRGLNTKELESIKAFVTRTHEKWIPKFKEFATQ 585 Query: 2882459 FARRFLFVGTTNQDEFLADETGERRWLPVRVGRCDVDRIAADCLQLWAEARAAYERAGNV 2882280 F RR L +GTTN+DEFL D+TG RRWLPV VG+ DV+ I D +QLWAEAR + G + Sbjct: 586 FPRRSLSIGTTNEDEFLGDKTGNRRWLPVAVGKMDVEGIKKDVIQLWAEAREVFNETG-I 644 Query: 2882279 DWREAETLARDVHAQHKLSDPWSPIVYDWLMGRGDYACDLGEPPCTRDFLQVHEIASGPL 2882100 ++EAE LA VH ++ + D W I+ WL + G+ P R FL+ +I L Sbjct: 645 QFQEAEQLANQVHEKYFIKDAWQEIIERWL---DEPDLMTGQKPRARQFLRSADILREAL 701 Query: 2882099 GMAHGRLTRSDEMRIGKILREMGYSRQQKRVGGRPVKVWVKPA*LPYP 2881956 + ++R ++MR+G +L+ + + +RV G+ +VW + L P Sbjct: 702 NLEPKNISRREQMRMGHVLQNCNFKQVLRRVDGKVCRVWERRNDLQQP 749 >ref|NP_795382.1|putative DNA polymerase III delta prime subunit Length = 446 Score = 350 bits (897), Expect = 5e-94 Identities = 182/445 (40%), Positives = 289/445 (64%), Gaps = 3/445 (0%) Frame = -2 Query: 2365262 IESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTR 2365083 +E K+ PH +EQ+VLG + ++ +A++L DFY+ HRI+++ + + + Sbjct: 1 MEDFKMLPHDPVSEQAVLGSIFINPEKIIEVAEYLKPDDFYKPAHRILFKAMLSISGNAE 60 Query: 2365082 PADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVAD 2364903 P DVVTV L + +GG+ YL + P++A+ YA+IV +A LR ++ Sbjct: 61 PIDVVTVKSVLESQDNLATIGGITYLLEVVNAVPTSAHAEHYAKIVAKKAQLRSIIDNLS 120 Query: 2364902 EISADAFNPQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTA 2364723 + +A++ + ++ +++ + E + +++ + + F I +L + ++I+ + Sbjct: 121 DSIGNAYD-ENMDIDEIIAKTERSLIEVSQSSNKSS--FRPIHDVLAENYQKIEE--RSN 175 Query: 2364722 NPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVF 2364543 N + +TG TGF D D++T+G+H +LII+A RP+MGKTAF++NI + VA + VAVF Sbjct: 176 NNTQITGIATGFYDFDKLTTGLHEDQLIILAARPAMGKTAFALNIAQNVATKSNKAVAVF 235 Query: 2364542 SMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNP 2364363 S+EM LV RML + G ++ H +RTG+LT E+W +L + +++EA +FID+T G+ Sbjct: 236 SLEMGAESLVERMLANEGTIESHHIRTGQLTVEEWQRLIYVQGELAEAPIFIDDTAGVKI 295 Query: 2364362 MELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVI 2364183 ++R+RARRL+++ LGLI++DYLQL+ G S+ +NR E+SEISR LK LAKEL VPVI Sbjct: 296 TDIRARARRLSQETDGLGLIVIDYLQLIQG-SRSDNRQQEVSEISRQLKILAKELKVPVI 354 Query: 2364182 ALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVY---NPDSPDKGTAEII 2364012 ALSQL+R +EQR +KRP+MSDLRESG+IEQDAD++ F+YRD+ Y + D P+ E+I Sbjct: 355 ALSQLSRSVEQRQDKRPIMSDLRESGSIEQDADIVAFLYRDDYYTDKSDDQPESNLTELI 414 Query: 2364011 IGKQRNGPIGPVRLTFLGQYTKFDN 2363937 I K R+G +G V L F +YTKF + Sbjct: 415 IKKNRHGSLGTVNLYFHKEYTKFSS 439 >ref|NP_932363.1|hypothetical protein Length = 389 Score = 340 bits (873), Expect = 3e-91 Identities = 193/384 (50%), Positives = 251/384 (65%), Gaps = 7/384 (1%) Frame = +2 Query: 957290 DPEIFAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGYPGKRYYGGCEYV 957469 D + + IE E RQ + LIASENY S VM AQGS TNKYAEGYPGKRYYGGC Sbjct: 3 DKVVQSIIEDEAMRQYCEVCLIASENYVSDDVMKAQGSIFTNKYAEGYPGKRYYGGCVKA 62 Query: 957470 DVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMSLAHGGHLTHGS 957649 D +E LAI+R K+LF ANVQP+SGSQANQ V+ A+LKPGD+++ MSL GGHLTHG Sbjct: 63 DEIENLAIERAKELFSCNFANVQPHSGSQANQAVYQALLKPGDSVLAMSLDCGGHLTHGH 122 Query: 957650 PVNMSGKWFNVVSYGLNENEDIDY-EAAEQLAQEHKPKLIVAGASAFSLKID---FERLA 957817 N SGK ++ YG+ + I+ + EQ+ KL+V G SA+ +I+ + ++A Sbjct: 123 KANASGKIYDFHHYGVFSDGTININQVVEQIRTIPDLKLVVIGYSAYVGRINEATYAKIA 182 Query: 957818 KIAKSVGAYLMVDMAHYAGLIAAGVYPNPVP-HADFVTTTTHKSLRGPRGGVILMK-AEY 957991 A S+GA LMVDMAH+AG +AA ++ NP+ AD VTTTTHK+LRGPRGG+IL A+ Sbjct: 183 DAAHSIGAKLMVDMAHFAGFVAARLHANPLKWGADVVTTTTHKTLRGPRGGLILTNDADI 242 Query: 957992 EKPINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEKVVENARVLAETLVKRGLR 958171 K +NSAIFPGIQGGPL+HVIA KAV F EAL ++ Y +V NA ++ ET G + Sbjct: 243 AKKVNSAIFPGIQGGPLLHVIAAKAVCFGEALREDYVDYMIQVAHNASIMYETFDAAGHK 302 Query: 958172 IVSGRTESH-VMLVDLRAKHITGKXXXXXXXXXHITVNKNAIPNDPEKPFVTSGVRLGSP 958348 +V G TE+H V+L + +TG+ I VNKN +PND P TSG+R+GSP Sbjct: 303 LV-GFTENHQVLLNTYESFGLTGREAEQLLEKEGIIVNKNMLPNDTRSPVETSGIRIGSP 361 Query: 958349 AMTTRGFGPAEAEQVGNLIADVLD 958420 AMTTRG+ ++ + I +L+ Sbjct: 362 AMTTRGWVESDFYDITIKIMHILE 385 >ref|NP_945090.1|gp59 Length = 429 Score = 336 bits (861), Expect = 8e-90 Identities = 180/399 (45%), Positives = 246/399 (61%), Gaps = 4/399 (1%) Frame = +1 Query: 845293 ASSPRVWRAVVAASIGNALEWFDLVVYGFFAVTISKLFFPAGNDTVSLLLTLGTFGVSFF 845472 ASS RAV+A +GN EWFD + Y FF+V I+KLFFP+ +D +SLLL++ T GV FF Sbjct: 14 ASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFF 73 Query: 845473 MRPLGAIVLGAYADREGRKAALTLSILLMMGGTLIIAVLPTYETIGVAAPVILVAARLMQ 845652 MRP+G IV+G AD+ GR+AALT++I LM GT +I PTY+ G+ AP+++V ARL+Q Sbjct: 74 MRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQ 133 Query: 845653 GFSAGGEFGSATAFLAEHVPG-RRGFFASWQVASQGLTTLLAAGFGTVLNAQLTAAQMAS 845829 GFSAGGE G ATA+L E VP R G++ SW AS G +LA+ + L Q+ S Sbjct: 134 GFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIES 193 Query: 845830 WGWRVPFFFGLLLGPVAYYIRTKVDETPEFLAAE--GTANPLRDTFASHKARLVAAMGVV 846003 WGWR+PF GL LGPV YIR+++++ P F A E G P+ + S + G+V Sbjct: 194 WGWRIPFLLGLGLGPVGIYIRSRLND-PGFPADERLGECAPVVEVVRSFSREALVGFGLV 252 Query: 846004 VLGTVATYLVLF-MPTYGVKQLGLAPSAAFAAILVVGVIQMAFAPLVGHWSDTYGRVRVM 846180 V TV +Y++LF +PTY K L L S F A+LV I + PL+GH SD +GR + Sbjct: 253 VFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFL 312 Query: 846181 IAPAIGILVLIYPAFAYLVAHPGFGTLIALQVLLAFLMTGYFAALPGLLSEVFPVQTRTT 846360 + +V YP FA L A PG TL+ QV+ ++ Y + LS++FP +T Sbjct: 313 AGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLST 372 Query: 846361 GMSLAYNVAVTIFGGFGPFIIAWLIKATGMKTAPSFYLM 846477 G+S++YN+AV FGGF II W I T AP+FY++ Sbjct: 373 GISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVI 411 Score = 327 bits (838), Expect = 4e-87 Identities = 177/421 (42%), Positives = 247/421 (58%), Gaps = 3/421 (0%) Frame = -2 Query: 1865729 MNTTTLTSQEAVRPSAAKIRRIIFAASIGNALEWFDLIVYGFFAVTIAKLFFPATSEATS 1865550 M T+T + A S+ RR + A +GN EWFD I Y FF+V IAKLFFP+T + S Sbjct: 1 MQTSTYAREAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLS 60 Query: 1865549 LMLTLGTFGLSYLIRPIGGFVLGAYADRAGRKASLLLSIAMMMAGTLLIALMPTYASIGI 1865370 L+L++ T G+ + +RPIGG V+G AD+ GR+A+L ++IA+M AGT +I PTY G+ Sbjct: 61 LLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGL 120 Query: 1865369 LAPLGIMLSRLMQGFSAGGEFASSTAFLVEHAP-QRRGFMSSWQFASQXXXXXXXXXXXX 1865193 APL I+++RL+QGFSAGGE +TA+L E P +R G+ +SW AS Sbjct: 121 GAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAV 180 Query: 1865192 XXXXXXXXAQLESWGWRVPFLFGLAIGPVGLYIR-RYVDEGVEFKTQARSEAPVRELFAE 1865016 Q+ESWGWR+PFL GL +GPVG+YIR R D G + APV E+ Sbjct: 181 FIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFPADERLGECAPVVEVVRS 240 Query: 1865015 QKVRVLLSIGALVISTAINYMIL-YMPTYAIKQLGLPASTGFAATLATGFVLTLVTPVVG 1864839 L+ G +V T +Y++L Y+PTYA K L LP+STGF A L ++ VTP++G Sbjct: 241 FSREALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIG 300 Query: 1864838 HLSDRTGRIRXXXXXXXXXXVTVYPTFAWLTRHASFATMLAALVWIGALKAMYCGALPAL 1864659 HLSD GR V YP FA L T+L V G + A Y G + A Sbjct: 301 HLSDLFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAA 360 Query: 1864658 MAELFPSQTRATGLAVSYNTGVTLFGGFAPFVITWLISATGNRLSPALYLMGCALLSLAA 1864479 ++++FP +TG+++SYN V FGGF+ +ITW I+ T N L+PA Y++ A++SL + Sbjct: 361 LSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLIS 420 Query: 1864478 L 1864476 + Sbjct: 421 V 421 Score = 299 bits (766), Expect = 8e-79 Identities = 163/396 (41%), Positives = 221/396 (55%) Frame = -3 Query: 14950 IGNALEWYDFTVFGFMTVVIAELFFPXXXXXXXXXXXXXTFGVAFFMRPIGGIVFGLYAD 14771 +GN EW+DF + F +V+IA+LFFP T GV FFMRPIGGIV G AD Sbjct: 28 VGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIAD 87 Query: 14770 RAGRKAALSLVILLMTAGIFLLXXXXXXXXXXXXXXXXXXXXXXLQGFSAGGEFGSATAL 14591 + GR+AAL++ I LMTAG ++ LQGFSAGGE G ATA Sbjct: 88 KVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGGATAY 147 Query: 14590 LIEAAPFSKRGFYGSWQMASQXXXXXXXXXXXXXVTRGLSHDALRSWGWRVPFILGLVIG 14411 L E P + G+Y SW AS + + L + SWGWR+PF+LGL +G Sbjct: 148 LRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLGLGLG 207 Query: 14410 PIGFYIRRHLADSEAFLHAQQSARRATLGEVFTRHPREVLCGLGSVIALTVTIYVLISYL 14231 P+G YIR L D F ++ A + EV RE L G G V+ TV YVL+ Y+ Sbjct: 208 PVGIYIRSRLNDP-GFPADERLGECAPVVEVVRSFSREALVGFGLVVFWTVCSYVLLFYI 266 Query: 14230 PTFAVKQLKLPYAESFYAVIVGNLLLMVLSPIAGAWSDRIGRKGXXXXXXXXXXXLMYPL 14051 PT+A K LKLP + F AV+VG +++ ++P+ G SD GR+ YPL Sbjct: 267 PTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGALLVAIVAAYPL 326 Query: 14050 FAWLDAAPSIARLIAVQAVLSVTLAGYYGPFGAMIAELFPANVRSTGLSIAYNVAVMLFG 13871 FA L+AAP + L+ Q V + +A Y GP A ++++FP V STG+SI+YN+AV+ FG Sbjct: 327 FAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISISYNLAVITFG 386 Query: 13870 GFGQFIVTWLIKVTGTPLAPTYYVMAGIALSIVAVA 13763 GF I+TW I T LAP +YV+A +S+++V+ Sbjct: 387 GFSAAIITWAIATTHNNLAPAFYVIAAAIVSLISVS 422 Score = 224 bits (571), Expect = 3e-56 Identities = 143/417 (34%), Positives = 210/417 (50%), Gaps = 6/417 (1%) Frame = +3 Query: 1216842 ASHAIAQESKVRTVFRVVSGNFLEMYDFMVYGYYASAIAKTYFPSGNAFASLMLSLSVFG 1217021 A+ + + ++ R V V+ GN E +DF+ Y +++ IAK +FPS + SL+LS+S G Sbjct: 10 AAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIG 69 Query: 1217022 AGFLMRPVGAIVLGAYIDHHGRRKGLILTLGLMAIGTLAVAAIPGYATIXXXXXXXXXXX 1217201 GF MRP+G IV+G D GRR L +T+ LM GT + P Y Sbjct: 70 VGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVA 129 Query: 1217202 XXXXXFSAGVELGGVSVYLSEIATKGHKGFYTSWQSGSQQXXXXXXXXXXXXXNRVLPAE 1217381 FSAG E+GG + YL E G+YTSW S + L + Sbjct: 130 RLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQ 189 Query: 1217382 EMTAWGWRIPFLIGCLIVPFLFLIRRSLKE----TDEFLAKRHRPTMGEIMRSMLDNWGI 1217549 ++ +WGWRIPFL+G + P IR L + DE L + + E++RS Sbjct: 190 QIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFPADERLGE--CAPVVEVVRSFSRE--- 244 Query: 1217550 VVAGMGMVIMTTVSFYMITAYTPTFGKEVLHLSSLDALVVTVCVGISNLVWL-PLSGALS 1217726 + G G+V+ TV Y++ Y PT+ +VL L S + V VG S ++++ PL G LS Sbjct: 245 ALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGF-IAVLVGASIVLFVTPLIGHLS 303 Query: 1217727 DRIGRRPVLIAFTVLTLLTAYPAVLWLVGDPSFLRLLAVELWLSFLYASYNGAMVVALTE 1217906 D GRR L ++ ++ AYP L P LL ++ + ASY G ++ AL++ Sbjct: 304 DLFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSD 363 Query: 1217907 VMPADVRTAGFSLAYSLAT-TIGGFTPAISTLLIHQTGNKAAPGLWLSVAAICGLIA 1218074 + P V + G S++Y+LA T GGF+ AI T I T N AP ++ AAI LI+ Sbjct: 364 MFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLIS 420 Score = 218 bits (556), Expect = 2e-54 Identities = 120/400 (30%), Positives = 206/400 (51%), Gaps = 1/400 (0%) Frame = -1 Query: 1528482 KRAVSAMAIGNAMEWFDFGVYSYIAVTLGKVFFPSSSPSXXXXXXXXXXXXXXLVRPLGG 1528303 +RAV A+ +GN EWFDF YS+ +V + K+FFPS+ + +RP+GG Sbjct: 20 RRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGG 79 Query: 1528302 MVFGPLGDRIGRQRVLAATMIMMAVGTFAIGLIPSYASIGIMAPVLLLVARLVQGFSTGG 1528123 +V G + D++GR+ L T+ +M GT IG P+Y G+ AP++++VARL+QGFS GG Sbjct: 80 IVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGG 139 Query: 1528122 EYGGAATFIAEFSTDKRRGFMGSFLEFGTLIGYVMGAGVVALLTASLSQEALLSWGWRVP 1527943 E GGA ++ E +R G+ S+++ ++ + + + L ++ + SWGWR+P Sbjct: 140 EMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIP 199 Query: 1527942 FLIAGPLGLIGLYIRMKLEETPAFKRQAEEREAQDKAVPKTRFRETLMRNWRALLLCVGL 1527763 FL+ LG +G+YIR +L + P F A+ER + V E + R L+ GL Sbjct: 200 FLLGLGLGPVGIYIRSRLND-PGF--PADERLGECAPVV-----EVVRSFSREALVGFGL 251 Query: 1527762 VLIFNVTDYMVLSYLPSFMSSTLHFDESHSXXXXXXXXXXXXXXXLAAGRLSDRIGRKPV 1527583 V+ + V Y++L Y+P++ S L S G LSD GR+ Sbjct: 252 VVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWF 311 Query: 1527582 MLAGCVGLLALSIPSMMLIHAGT-TASVFXXXXXXXXXLSCFTGVMPSALPALFPTEIRY 1527406 + + + + P +++A ++ ++ + G + +AL +FP + Sbjct: 312 LAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLS 371 Query: 1527405 GALAIGFNVSVSLFGGTTPLVTAWLVDVTHNLMMPAYYMM 1527286 ++I +N++V FGG + + W + THN + PA+Y++ Sbjct: 372 TGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVI 411 Score = 182 bits (462), Expect = 1e-43 Identities = 118/434 (27%), Positives = 199/434 (45%), Gaps = 5/434 (1%) Frame = +2 Query: 1895621 QSMDVQTDQAALSAHDTRRRVFAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTT 1895800 Q+ + A ++ DT RR A++ GN EWFDF YSF ++ A FFPS + Sbjct: 2 QTSTYAREAAPSASSDTHRR--AVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNL 59 Query: 1895801 QLLNTAGVFAAGFLMRPIGGWLFGRIADRHGRRNAMMISVLMMCGGSLVIAVLPTYAQIG 1895980 LL + GF MRPIGG + G IAD+ GRR A+ +++ +M G+ +I PTY G Sbjct: 60 SLLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAG 119 Query: 1895981 XXXXXXXXXXXXFQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLCALLVL 1896160 QG S GGE G + Y+ E R G++ S+ ++ + A ++ Sbjct: 120 LGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLA 179 Query: 1896161 VILQQTLSADELKAWGWRIPFVVGAAAALISLYLRKSLDETSTTASRDKKDAGTIRGVWQ 1896340 V + + L ++++WGWRIPF++G + +Y+R L++ A + + V + Sbjct: 180 VFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPGFPADERLGECAPVVEVVR 239 Query: 1896341 HKGAFFTVVGFTAGGSLIFYTFTTYMQKYLVNT-AGMHAKTASNVMTVALLV----YMLM 1896505 F+ G ++F+T +Y+ + + T A K S+ +A+LV + + Sbjct: 240 S----FSREALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFV 295 Query: 1896506 QPVFGALSDRIGRRTSMILFGSFAVIGTVPLMHALKDVTSPVAAFVLITVALAIVSFYTS 1896685 P+ G LSD GRR + A++ PL L V V +++ Y Sbjct: 296 TPLIGHLSDLFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEG 355 Query: 1896686 ISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSEETFYWYVTVLCAI 1896865 ++MFP V + G+ +SY +A FGG + + W + + + AI Sbjct: 356 PILAALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAI 415 Query: 1896866 SLIVSWRMRDPSKE 1896907 ++S + P ++ Sbjct: 416 VSLISVSLWQPRRK 429 Score = 169 bits (428), Expect = 1e-39 Identities = 117/424 (27%), Positives = 193/424 (45%), Gaps = 3/424 (0%) Frame = -3 Query: 1170631 ATGSAGAVSHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSATAQALSAFVTF 1170452 A SA + +HRR V A +G E++DF Y+ + ++I +FFP L + T Sbjct: 10 AAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFS-VIIAKLFFPSTDDNLSLLLSVSTI 68 Query: 1170451 GIAFIARPIGSFLFGHFGDRIGRKSTLVASLLVMGVSTTAIGFVPGYDAIGALAPVLLCV 1170272 G+ F RPIG + G D++GR++ L ++ +M T IGF P Y G AP+++ V Sbjct: 69 GVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVV 128 Query: 1170271 LRFXXXXXXXXXXXXXXXXATEHAPQGKRGWFGMFPQLGPSVGFLMSNGLFFALALSLSD 1170092 R E P + G++ + Q ++++ L + L + Sbjct: 129 ARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDE 188 Query: 1170091 DQFRSWGWRIPFLVSAVLVALGLYVRLKITETPAFQAALDRNERVRVPVATLITQHWRPT 1169912 Q SWGWRIPFL+ L +G+Y+R ++ + P F A D PV ++ R Sbjct: 189 QQIESWGWRIPFLLGLGLGPVGIYIRSRLND-PGFPA--DERLGECAPVVEVVRSFSREA 245 Query: 1169911 LLGALAMVVCYTLFYISTVFSLSYGVSALHIPRQS-FLGLLCFAVVFMGLATPLSAWASD 1169735 L+G +V Y+ + +Y L +P + F+ +L A + + TPL SD Sbjct: 246 LVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVL-FVTPLIGHLSD 304 Query: 1169734 RFGRKPVLVVGAIAALLSGFAMEPLLGSG-SMPLVALFLTIELFLMGVTFAPMGALLPEL 1169558 FGR+ L + A+++ + + +L + + + +F + ++ P+ A L ++ Sbjct: 305 LFGRRWFLAGALLVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDM 364 Query: 1169557 FPTNVRYTGAGVAYNLGGI-LGASIAPYIAQLLAARGGLSWVGGYVSVAAAISLIGVLLM 1169381 FP V TG ++YNL I G A I +A YV AA +SLI V L Sbjct: 365 FPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLISVSLW 424 Query: 1169380 RETR 1169369 + R Sbjct: 425 QPRR 428 Score = 154 bits (388), Expect = 5e-35 Identities = 106/401 (26%), Positives = 176/401 (43%), Gaps = 7/401 (1%) Frame = +3 Query: 1494933 IGTMIEWYDFYIYATAAALVFGELYFPSHDRFVSTMASFATFAVGFFARPLGGVIFGHLG 1495112 +G EW+DF Y+ + ++ +L+FPS D +S + S +T VGFF RP+GG++ G + Sbjct: 28 VGNGFEWFDFISYSFFSVII-AKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGGIVIGGIA 86 Query: 1495113 DRIGRKKALMTTLMMMGVATVCVGLLPDYSKVGMXXXXXXXXXXXXQGIAVGGEWGGAVL 1495292 D++GR+ AL T+ +M T +G P Y G+ QG + GGE GGA Sbjct: 87 DKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGGEMGGATA 146 Query: 1495293 MAGEHAPQGRRTFFASFAQLGSPAGLIL-SLIAFRAVTSMDKADFLAWGWRLPFLASSXX 1495469 E P R ++ S+ Q +IL S++A V +D+ +WGWR+PFL Sbjct: 147 YLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIPFLLGLGL 206 Query: 1495470 XXXXXXXXXXXNESPEFARVKETNRTVKLPVAEVFRSASGLVALCIGANTIGIAGVYFTN 1495649 N+ P F + PV EV RS S + G Y Sbjct: 207 GPVGIYIRSRLND-PGFPADERLGECA--PVVEVVRSFSREALVGFGLVVFWTVCSYVLL 263 Query: 1495650 TFMIAYTTQYVGVSRSLILDSLXXXXXXXXXXXXXXXXXXERIGGARFLKLAALLAMLSP 1495829 ++ Y ++ + + S ++ + G FL A L+A+++ Sbjct: 264 FYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGALLVAIVAA 323 Query: 1495830 YPMFMLVQG--GTSASLIAGIALAVVCMAGFYSVIAGFVSDVFPAHVRYSAISLAYQICG 1496003 YP+F ++ G L+ + +V +A + I +SD+FP V + IS++Y + Sbjct: 324 YPLFAMLNAAPGLKTLLVFQVVFGLV-IASYEGPILAALSDMFPDGVLSTGISISYNLAV 382 Query: 1496004 AIAGGLTPLVGTWLA----HRFAGQWWPLAVFYTCLAGISL 1496114 GG + + TW + A ++ +A L +SL Sbjct: 383 ITFGGFSAAIITWAIATTHNNLAPAFYVIAAAIVSLISVSL 423 Score = 153 bits (387), Expect = 7e-35 Identities = 121/433 (27%), Positives = 195/433 (45%), Gaps = 12/433 (2%) Frame = -2 Query: 2697176 METSMSRQQSPTTAPQPRPGRAAFAAFVGTTIEWYDFYIYGTAAALVFGKVFFASTMDPG 2696997 M+TS +++ +A RA A VG EW+DF Y + ++ K+FF ST D Sbjct: 1 MQTSTYAREAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVII-AKLFFPST-DDN 58 Query: 2696996 VATLLAFVTFWAGFAARPLGGIVFGHLGDRVGRKTALVITLVMMGLATTGIGLLPGYAQI 2696817 ++ LL+ T GF RP+GGIV G + D+VGR+ AL +T+ +M T IG P Y Sbjct: 59 LSLLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDA 118 Query: 2696816 GVWAPAGLVVLRVLQGIAVGGEWGGAVLIASENAPKHRSILYAAFAQQGSPTGNXXXXXX 2696637 G+ AP +VV R+LQG + GGE GGA E P R Y ++ Q Sbjct: 119 GLGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVL 178 Query: 2696636 XXXXXXXXXPSFL-MWGWRIPFLLSAVLVIIGMVIRLKLEESADMQRVLARKRTVK-LPL 2696463 + WGWRIPFLL L +G+ IR +L + A +R + P+ Sbjct: 179 AVFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPG----FPADERLGECAPV 234 Query: 2696462 RDVVRDHWVVVLLAAGTLPVINV-TYFRSTFALSWATKELGYAQGT-FLGILSISLVVQF 2696289 +VVR L+ G + V +Y + ++A+K L T F+ +L + +V F Sbjct: 235 VEVVRSFSREALVGFGLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLF 294 Query: 2696288 LMQPVG--------AWFVSKVDMRRAMCWILIPEIVLMPVMFHALATRSYWVAVAGMCIS 2696133 + +G WF++ +L+ + P+ A + + Sbjct: 295 VTPLIGHLSDLFGRRWFLAGA--------LLVAIVAAYPLFAMLNAAPGLKTLLVFQVVF 346 Query: 2696132 TIPSAMFYGAVGGVLARVFPANIRYTGLSLAYQLSALVVGGGTPVLAQAILNSTGSIVGV 2695953 + A + G + L+ +FP + TG+S++Y L+ + GG + + + +T + + Sbjct: 347 GLVIASYEGPILAALSDMFPDGVLSTGISISYNLAVITFGGFSAAIITWAIATTHNNLAP 406 Query: 2695952 AVASGLYAFVSLV 2695914 A A VSL+ Sbjct: 407 AFYVIAAAIVSLI 419 Score = 140 bits (352), Expect = 8e-31 Identities = 91/337 (27%), Positives = 144/337 (42%), Gaps = 4/337 (1%) Frame = +3 Query: 3258822 ATLGGQISHAPMTGEEKKVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIF 3259001 +T + + + + ++ + A +G FEW+DF + I+K FF + + + Sbjct: 4 STYAREAAPSASSDTHRRAVIAVIVGNGFEWFDFISYSFFSVIIAKLFFPSTDDNLSLLL 63 Query: 3259002 TLLGFAAGFAVRPFGAIVFGRLGDLVGRKHTFLVTIVIMGLSTFVVGFLPGYASIGIAAP 3259181 ++ GF +RP G IV G + D VGR+ VTI +M T ++GF P Y G+ AP Sbjct: 64 SVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAP 123 Query: 3259182 VIFIAMRXXXXXXXXXXXXXXXTYVAEHAPANRRGFYTAWIQTTATXXXXXXXXXXXXXR 3259361 ++ + R Y+ E PA R G+YT+WIQ + Sbjct: 124 LMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIV 183 Query: 3259362 TLIGEEAFGNWGWRVPFVASILLLAVSVWIRMQLNESPVFLRIKAEGKTSKAPLTEAFGQ 3259541 + E+ +WGWR+PF+ + L V ++IR +LN+ P F + G+ AP+ E Sbjct: 184 KCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLND-PGFPADERLGEC--APVVEVVRS 240 Query: 3259542 WKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGXXXXXXXXXXXXXGTPFFL 3259721 + ALVG G V W + LF++ G L Sbjct: 241 FSR-----EALVGF--GLVVFWTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVL 293 Query: 3259722 F----FGSLSDKIGRKPIILAGCLIAALTYFPLFKAL 3259820 F G LSD GR+ + L+A + +PLF L Sbjct: 294 FVTPLIGHLSDLFGRRWFLAGALLVAIVAAYPLFAML 330 Score = 138 bits (347), Expect = 3e-30 Identities = 100/383 (26%), Positives = 164/383 (42%), Gaps = 1/383 (0%) Frame = +1 Query: 761653 RAAWTCSLGSALEYYDFALYTLASALVFGPLFFPAQTAEMRLIASFGTYFVGFAVRPLGG 761832 RA +G+ E++DF Y+ S ++ LFFP+ + L+ S T VGF +RP+GG Sbjct: 21 RAVIAVIVGNGFEWFDFISYSFFSVII-AKLFFPSTDDNLSLLLSVSTIGVGFFMRPIGG 79 Query: 761833 VVFGILGDRIGRKFVLTATVLLMGIASTLIGVLPTFATAGYWAPXXXXXXXXXXXXXXXX 762012 +V G + D++GR+ LT T+ LM + +IG PT+ AG AP Sbjct: 80 IVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSAGG 139 Query: 762013 XXXXXXVLMTEYAPPGKRGFYASLPFLGIQLGTXXXXXXXXXXXXNID-RVTDGWGWRVP 762189 + E P + G+Y S I +D + + WGWR+P Sbjct: 140 EMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGWRIP 199 Query: 762190 FLFSAVIVAVGIYMRVRLHESPTFVRLEKRAQVLANPLKSAVQHSKRSLLIGIGLRMAEN 762369 FL + VGIY+R RL++ P F E+ + P+ V+ R L+G GL + Sbjct: 200 FLLGLGLGPVGIYIRSRLND-PGFPADERLGE--CAPVVEVVRSFSREALVGFGLVVFWT 256 Query: 762370 GGSSIYQALAVSYLAGVIGMKGPVGALALVCAATVGACTVPLAGWLSDRYGRVRVYRTFA 762549 S + +Y + V+ + G +A++ A++ PL G LSD +GR Sbjct: 257 VCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPLIGHLSDLFGRRWFLAGAL 316 Query: 762550 WLQLALAFPVWWIFSHGNXXXXXXXXXXXQGFANWGMLGAQAALLPELFGARHRYMGVSF 762729 + + A+P++ + + G G A L ++F G+S Sbjct: 317 LVAIVAAYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISI 376 Query: 762730 SREVSAVLAGGIAPLVGATIIAT 762798 S ++ + GG + + IAT Sbjct: 377 SYNLAVITFGGFSAAIITWAIAT 399 Score = 94.0 bits (232), Expect = 7e-17 Identities = 106/380 (27%), Positives = 163/380 (42%), Gaps = 29/380 (7%) Frame = -1 Query: 520434 STRERRTLYAGFGGYAVDAFDFMIYSFLIPTLIAT--WGMTKSEAGMIATSSLISSA--- 520270 S RR + A G + FDF+ YSF +IA + T ++ + S I Sbjct: 16 SDTHRRAVIAVIVGNGFEWFDFISYSFF-SVIIAKLFFPSTDDNLSLLLSVSTIGVGFFM 74 Query: 520269 --LGGWVAGILADRYGRVRVLQWTIATFALFTCLSGFTHSF--------WQLLATRTLQG 520120 +GG V G +AD+ GR L TIA T + GF ++ ++ R LQG Sbjct: 75 RPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQG 134 Query: 520119 FGFGGEWSVVTIMMAETIRSPEHRGKAVGTVQSSWSFGWGAAAILYWAFFALLPEQV--- 519949 F GGE T + E + + H G +Q+S F A++L L EQ Sbjct: 135 FSAGGEMGGATAYLRERVPAERH-GYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIES 193 Query: 519948 -AWRACFWIGILPALWILYIRRNVSDPDVYTATRRARDEGRVSGHFLEIFSPPHLRATLF 519772 WR F +G+ +YIR ++DP + A R + V + FS R L Sbjct: 194 WGWRIPFLLGLGLGPVGIYIRSRLNDPG-FPADERLGECAPVV-EVVRSFS----REALV 247 Query: 519771 GSALCTGMLGGYYAITTWLPTYLKTVRHLSVFNTSGYLVVLIVGSFVGYVVGAI--LSDR 519598 G L Y + ++PTY V L + +++G++ VL+ S V +V I LSD Sbjct: 248 GFGLVVFWTVCSYVLLFYIPTYASKV--LKLPSSTGFIAVLVGASIVLFVTPLIGHLSDL 305 Query: 519597 LGRR---ASFILFAIGSFSLGMAYTMLPITDTA-----MLLLGFPLGIVVQGIFAGVGAY 519442 GRR A +L AI + AY + + + A +L+ G+V+ + A Sbjct: 306 FGRRWFLAGALLVAIVA-----AYPLFAMLNAAPGLKTLLVFQVVFGLVIASYEGPILAA 360 Query: 519441 LSELYPGAIRGSGQGFCYNL 519382 LS+++P + +G YNL Sbjct: 361 LSDMFPDGVLSTGISISYNL 380 Score = 73.6 bits (179), Expect = 9e-11 Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 27/208 (12%) Frame = -1 Query: 1815264 RNVTIAAYLGWTLDAFDFFLMVFVLKDIAAEFGSTIPAVAFALTLTLA---------MRP 1815112 R IA +G + FDF F IA F P+ L+L L+ MRP Sbjct: 20 RRAVIAVIVGNGFEWFDFISYSFFSVIIAKLF---FPSTDDNLSLLLSVSTIGVGFFMRP 76 Query: 1815111 LGALIFGRLADRFGRRPTLMVNIACYSLLELASGFAPSL--------TALLVLRALFGVA 1814956 +G ++ G +AD+ GRR L V IA + GFAP+ ++V R L G + Sbjct: 77 IGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFS 136 Query: 1814955 MGGEWGVGSALTMETVPTHARGFVSGLLQAGYPSGYLLASVVFGLFYQYI--------GW 1814800 GGE G +A E VP G+ + +QA +LASV+ + + GW Sbjct: 137 AGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIESWGW 196 Query: 1814799 RGMFMVGVLPALLVLYVRAHV--PESPA 1814722 R F++G+ + +Y+R+ + P PA Sbjct: 197 RIPFLLGLGLGPVGIYIRSRLNDPGFPA 224 Score = 54.7 bits (130), Expect = 4e-05 Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 18/197 (9%) Frame = -2 Query: 2024849 HRFVVWVIGIGLFFDMYEIFLVSTIGSALQNEYGLSRQSTDFKLLLASAFIGMF-----V 2024685 HR V + +G F+ ++ F+ + S + + + LLL+ + IG+ + Sbjct: 19 HRRAVIAVIVGNGFEWFD-FISYSFFSVIIAKLFFPSTDDNLSLLLSVSTIGVGFFMRPI 77 Query: 2024684 GAMCLGSLADRIGRRKAFLLTLTWYSA-FSLVGAFSVNAD-------MLVACRFLTGIGV 2024529 G + +G +AD++GRR A +T+ +A +++G D M+V R L G Sbjct: 78 GGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIVVARLLQGFSA 137 Query: 2024528 GAIYPVADSFLSEILPKEKRGRLAAWAYTTSYVAVPLVGFLALW----LNPLHVGGVAGW 2024361 G A ++L E +P E+ G +W + A+ L LA++ L+ + GW Sbjct: 138 GGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLDEQQIES-WGW 196 Query: 2024360 RIILAIG-SLGAVYVML 2024313 RI +G LG V + + Sbjct: 197 RIPFLLGLGLGPVGIYI 213 Score = 53.9 bits (128), Expect = 8e-05 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 22/162 (13%) Frame = +2 Query: 1109504 SILFALFLIGWGL------SFIWGPLADRFGRVRTLAASILIYSVFTGAAAFVHDV---- 1109653 S+L ++ IG G + G +AD+ GR L +I + + T F Sbjct: 60 SLLLSVSTIGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAG 119 Query: 1109654 ----WALAACRLIAGIGVGGEWALAGTYVAESWPEDRRKMGAGYLQTGYYFGF------- 1109800 + RL+ G GGE A Y+ E P +R ++Q F Sbjct: 120 LGAPLMIVVARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLA 179 Query: 1109801 -FIAACLNYTIGATYGWRAMFLCGLAPALLAVFTVMRVKEPG 1109923 FI CL+ ++GWR FL GL + ++ R+ +PG Sbjct: 180 VFIVKCLDEQQIESWGWRIPFLLGLGLGPVGIYIRSRLNDPG 221 Score = 49.3 bits (116), Expect = 0.002 Identities = 90/402 (22%), Positives = 146/402 (36%), Gaps = 29/402 (7%) Frame = -2 Query: 3178664 VAAGLIGMGIGSACAGIVADRFGRRQAVIGSVFLFGIATCAIGFAPDV--------TAIA 3178509 + G IG G +AD+ GRR A+ ++ L T IGFAP I Sbjct: 68 IGVGFFMRPIGGIVIGGIADKVGRRAALTVTIALMTAGTAMIGFAPTYKDAGLGAPLMIV 127 Query: 3178508 ALRFVAGLGIGGALPTATTMTAEYTPARRR---TMMVTATI-VCVPLGGMLAGLFA---- 3178353 R + G GG + AT E PA R T + A+I + L +LA Sbjct: 128 VARLLQGFSAGGEMGGATAYLRERVPAERHGYYTSWIQASIGFAIILASVLAVFIVKCLD 187 Query: 3178352 HEVLPRYGWRGLFFAGGALPLVLGFVLVRALPESPRYLA-RRPARWPELGALLARMERPV 3178176 + + +GWR F G L V + +R+ P + A R + ++ R Sbjct: 188 EQQIESWGWRIPFLLGLGLGPV--GIYIRSRLNDPGFPADERLGECAPVVEVVRSFSREA 245 Query: 3178175 APGTAFTDMRDXXXXXXXXXXXALFESGQARDTIALWCAFFMCLLAVYAAFSWLPTMLAA 3177996 G + W + Y ++PT A Sbjct: 246 LVGFGL---------------------------VVFW------TVCSYVLLFYIPTY--A 270 Query: 3177995 SGLSVSVAGTGLTAYNLGGVIGALLCAWTIAHA----GSRWPLVLCSIGGAASAVWLMG- 3177831 S + + TG A +G I L I H G RW L + +A L Sbjct: 271 SKVLKLPSSTGFIAVLVGASI-VLFVTPLIGHLSDLFGRRWFLAGALLVAIVAAYPLFAM 329 Query: 3177830 VDASRHTGWLIVGLGLHGLFVNAVQSTMYALCAYIYPTAVRATGTA-----SALAFGRLG 3177666 ++A+ L+V + GL + + + + A + ++P V +TG + + + FG Sbjct: 330 LNAAPGLKTLLVFQVVFGLVIASYEGPILAALSDMFPDGVLSTGISISYNLAVITFGGFS 389 Query: 3177665 AILSAFAGAIVITTGG--ATAYLTMLAIAMGVVCVALLVVRR 3177546 A + +A + TT A A+ + A + ++ V+L RR Sbjct: 390 AAIITWA---IATTHNNLAPAFYVIAAAIVSLISVSLWQPRR 428 Score = 45.1 bits (105), Expect = 0.035 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 7/146 (4%) Frame = -1 Query: 1815234 WTLDAFD--FFLMVFVLKDIAAEFGSTIPAVAFALTLTLAMRPLGALIFGRLADRFGRR- 1815064 WT+ ++ F++ + K + + AV ++ L + PL G L+D FGRR Sbjct: 255 WTVCSYVLLFYIPTYASKVLKLPSSTGFIAVLVGASIVLFVTPL----IGHLSDLFGRRW 310 Query: 1815063 ----PTLMVNIACYSLLELASGFAPSLTALLVLRALFGVAMGGEWGVGSALTMETVPTHA 1814896 L+ +A Y L + + AP L LLV + +FG+ + G A + P Sbjct: 311 FLAGALLVAIVAAYPLFAMLNA-APGLKTLLVFQVVFGLVIASYEGPILAALSDMFP--- 366 Query: 1814895 RGFVSGLLQAGYPSGYLLASVVFGLF 1814818 G+L G Y LA + FG F Sbjct: 367 ----DGVLSTGISISYNLAVITFGGF 388 >ref|NP_817564.1|gp117 Length = 320 Score = 332 bits (850), Expect = 1e-88 Identities = 167/296 (56%), Positives = 221/296 (74%), Gaps = 1/296 (0%) Frame = -3 Query: 3256030 QIEKQFGKGSIMRMGDGEATENIQVVSTGSLGLDIAXXXXXXXXXXXVEIYGPESSGKTT 3255851 +++K+FG GS M++GD T + V+ TGS+ LD A VEIYGPESSGK+T Sbjct: 9 EVDKRFGAGSAMKLGDKPQT--VDVIPTGSIALDGALGIGGYPRGRVVEIYGPESSGKST 66 Query: 3255850 LTLQVIAELQKIGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPDTGEQALEITDALVR 3255671 L L +A QK GG AA+IDAEH+LD +YA LGV++ L++ QPDTGEQALEI D LV+ Sbjct: 67 LCLHAVANAQKAGGNAAYIDAEHSLDPEYAKALGVDLDNLVVVQPDTGEQALEIVDLLVK 126 Query: 3255670 SGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQ 3255491 SG + ++V+DSVAALVP+AE+EG++GDS GL ARLMSQA+RKLTGTI TN L +++NQ Sbjct: 127 SGELSIVVVDSVAALVPRAELEGDIGDSHVGLHARLMSQAMRKLTGTISSTNTLTLWVNQ 186 Query: 3255490 IRMKIG-VMFGNPETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGNETRVKVVKNKVSP 3255314 +R KIG V +G ETTTGG AL+FY+SVR+D+RRI + K+ DE +GN TRVKVVKNK++P Sbjct: 187 LREKIGNVGYGPNETTTGGKALRFYASVRMDVRRIATEKEGDEAVGNRTRVKVVKNKLAP 246 Query: 3255313 PFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNAREFL 3255146 P R A F ++YGEGISR+ E++DL V +V K+GAW+ Y + + QGK A ++L Sbjct: 247 PHRNAEFSVVYGEGISREVELLDLAVSQGLVKKSGAWFKYGDKNVAQGKPKAVQWL 302 >ref|NP_818503.1|gp203 Length = 442 Score = 322 bits (824), Expect = 1e-85 Identities = 182/369 (49%), Positives = 236/369 (63%), Gaps = 1/369 (0%) Frame = +2 Query: 2914574 TAQVIEQRLQEFKVPVTVVGASAGPVITRFEIEPALGVRGSQIVGLMKDLSRGLGLTSIR 2914753 +AQ+I L+EF + V G + GP +TR+EI GVR ++ L L+ L S+R Sbjct: 10 SAQIISA-LREFDIEAKVTGRTDGPSVTRYEITLGPGVRIQKVAQLQSQLAYALATESVR 68 Query: 2914754 VVETIPGKTCMGLELPNAKRQMIRLSEILESRQYQHSASQLTIAMGKDITGHPVVTDLAK 2914933 VV IPGKT +G+ELP +RQ +RL I+ + LT+A+GKD+ G + +LAK Sbjct: 69 VVAPIPGKTAVGIELPRPERQTVRLQHIVPEDDHP-----LTVAVGKDVEGKDISLNLAK 123 Query: 2914934 APHMLVAGTTGSGKSVAINAMILSLLYKATPEDVRLIMIDPKMLELSVYEGIPHLLAPVV 2915113 PH+LVAG TGSGKS IN+M++SLLY+ATP+ V+LIMIDPK +EL+ Y GIPHLL PVV Sbjct: 124 MPHLLVAGATGSGKSSFINSMLVSLLYRATPDRVKLIMIDPKCVELTPYNGIPHLLQPVV 183 Query: 2915114 TDMKLAANALNWCVGEMEKRYRLMSAVGVRNLAGFNQKIRDAEAKEKKIGNPFSLTPEDP 2915293 T+ A L W EM+ RYR M GVR+ +K+G Sbjct: 184 TEADEAVKTLRWLTVEMDDRYRQMQEAGVRH--------------AEKLG---------- 219 Query: 2915294 EPLSTLPLIVVVIDELADLMMVAGKK-IEELIARLAQKARAAGIHLILATQRPSVDVITG 2915470 LP IVVV+DELADLMM KK +E I R+AQKARAAGIHL+LATQRPSVDV+TG Sbjct: 220 -----LPYIVVVVDELADLMMGGYKKEVEANIVRIAQKARAAGIHLVLATQRPSVDVVTG 274 Query: 2915471 LIKANIPTRVAFQVSSKIDSRTILDQMGAESLLGMGDMLFLPPGTGYPQRVHGAFVADEE 2915650 LIK+N+P+R++F +S DSR ILD+ GAE L+GMGD LFLP G R+ GAFV+D E Sbjct: 275 LIKSNVPSRLSFATASLTDSRVILDEGGAEQLMGMGDGLFLPVGARSAIRIQGAFVSDGE 334 Query: 2915651 VHRVVEYLK 2915677 + V ++ Sbjct: 335 IEAAVNNVR 343 Score = 312 bits (800), Expect = 9e-83 Identities = 180/368 (48%), Positives = 231/368 (62%), Gaps = 1/368 (0%) Frame = +2 Query: 1152590 SRLIEKKLKDFGVEASVVAAYPGPVVTRYEIEPATGVKGSQIVNLAKDLARSLSLVSIRV 1152769 S I L++F +EA V GP VTRYEI GV+ ++ L LA +L+ S+RV Sbjct: 10 SAQIISALREFDIEAKVTGRTDGPSVTRYEITLGPGVRIQKVAQLQSQLAYALATESVRV 69 Query: 1152770 VETIPGKNYMALELPNQRRQTVHLSEIIGSEVYXXXXXXXXXXXGKDIGGKPVCADLAKM 1152949 V IPGK + +ELP RQTV L I+ + + GKD+ GK + +LAKM Sbjct: 70 VAPIPGKTAVGIELPRPERQTVRLQHIVPEDDHPLTVAV-----GKDVEGKDISLNLAKM 124 Query: 1152950 PHLLVAGTTGSGKSVGINAMILSLLYKATAEQVRLILIDPKMLEMSVYEGIPHLLCPVVT 1153129 PHLLVAG TGSGKS IN+M++SLLY+AT ++V+LI+IDPK +E++ Y GIPHLL PVVT Sbjct: 125 PHLLVAGATGSGKSSFINSMLVSLLYRATPDRVKLIMIDPKCVELTPYNGIPHLLQPVVT 184 Query: 1153130 DMRQAGNALNWTVAEMERRYKLMSKLGVRNLAGYNNKIDEAAKREEKLPNPFSLTPEDPE 1153309 + +A L W EM+ RY+ M + GVR+ E Sbjct: 185 EADEAVKTLRWLTVEMDDRYRQMQEAGVRHA----------------------------E 216 Query: 1153310 PLGRLPNIVVVIDELADLMMVVGKK-VEELIARIAQKARAAGIHLILATQRPSVDVITGL 1153486 LG LP IVVV+DELADLMM KK VE I RIAQKARAAGIHL+LATQRPSVDV+TGL Sbjct: 217 KLG-LPYIVVVVDELADLMMGGYKKEVEANIVRIAQKARAAGIHLVLATQRPSVDVVTGL 275 Query: 1153487 IKANVPTRIAFQVSSKIDSRTILDQMGAESLLGMGDMLYLAPGTGLPVRVHGAFVADDEV 1153666 IK+NVP+R++F +S DSR ILD+ GAE L+GMGD L+L G +R+ GAFV+D E+ Sbjct: 276 IKSNVPSRLSFATASLTDSRVILDEGGAEQLMGMGDGLFLPVGARSAIRIQGAFVSDGEI 335 Query: 1153667 HRVVEKLK 1153690 V ++ Sbjct: 336 EAAVNNVR 343 >ref|YP_024945.1|gp25 Length = 427 Score = 290 bits (741), Expect = 6e-76 Identities = 174/410 (42%), Positives = 240/410 (58%), Gaps = 14/410 (3%) Frame = -3 Query: 2886385 RLTNVLNDIQLRQLVRAGVPAAKADGNGLTFTLSATGTASWILRF-YHRGRRQELTLGRY 2886209 R TNVL+D+QLR+ + AG P AK+DG GLTFTLSA+GTA+W+LR+ GRR+ELTLG Y Sbjct: 3 RQTNVLDDLQLRRWISAGQPVAKSDGGGLTFTLSASGTAAWVLRYRLAGGRRRELTLGNY 62 Query: 2886208 PDITLSXXXXXXXXXXXXXADGINPAEEQRKLR--SRRDWSMRELIADYRVK-----VLS 2886050 PD++L+ +G +PA ++ R S W++ +LIAD+R K + Sbjct: 63 PDLSLAAARKAARAHRVAIDNGADPAAAKKTERAASAAAWTVNDLIADFRTKRFAQDIEK 122 Query: 2886049 TLATSTQRSYGRNLKRVENG-MGAMSVQSVGPADIVAEIERHDLGWVEIFTLWCVLRGLF 2885873 L+ ST +L V +G++ V+ V P DI+ +E GW + + LF Sbjct: 123 PLSASTIYYRTWDLDNVAGPKLGSLEVRKVTPLDIIQAVEDAGRGWTMSKRILTTVTQLF 182 Query: 2885872 KHAAGKKIIVANPCAGIQLDAIIGKRPPVKPRLMLTDDELYVLL---NAKMRDVNLYAVR 2885702 HA G+KII ANPCAG++L AI+G RP V+PR+MLT +EL +L + + N +R Sbjct: 183 DHACGRKIIAANPCAGVKLTAIMGARPKVRPRVMLTVEELAKILPGIDDTIGRANGLMLR 242 Query: 2885701 IALATGVRISELYTALRRDLHLSEGRWHVPKS--KTGPEMDIPLVPIVIEWFERLLALAG 2885528 + LAT VR +EL A + + L G W V KT +PLVP+V W E L+AL+G Sbjct: 243 VLLATCVRTNELVKARKELIDLQRGSWFVADETVKTRNGFLVPLVPLVSSWIEELIALSG 302 Query: 2885527 TSEYVLPARLSNRLDRHHGDTHVSKDAIREAIDYWIEHHEPAIRRFTPHDLRSTMKSHMR 2885348 S ++LPAR R+ R G+THV + AID + RRFTPHD RST K HM Sbjct: 303 DSPWLLPARGQQRIKRL-GNTHVGNTTLWAAIDRAFLRGDLEARRFTPHDTRSTAKGHMM 361 Query: 2885347 RLKVPRDISEMCLNHKIPGVEGIYDQYTYWDERRHALGTWAAHLERCARG 2885198 + +P++I+E+ LNHK+ G+EGIYD ERR AL WA + CA G Sbjct: 362 NMGIPKEITEIALNHKLRGMEGIYDVRQEIPERRLALEQWAEVVGACADG 411 Score = 45.4 bits (106), Expect = 0.027 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 11/211 (5%) Frame = -3 Query: 3158371 TSSNRRLSVFRRYYGWAVREHRVSADPTL-----RITSAKQAARFPSTLSEAQVEALLGA 3158207 T S R L+ + + A ++A+P I A+ R L+ ++ +L Sbjct: 169 TMSKRILTTVTQLFDHACGRKIIAANPCAGVKLTAIMGARPKVRPRVMLTVEELAKIL-- 226 Query: 3158206 PDIGTPLGLRDRTMLELMYASGLRVSELVMLKTVEVGLNEGVVRVMGKGSKER---LVPF 3158036 P I +G + ML ++ A+ +R +ELV + + L G V + K R LVP Sbjct: 227 PGIDDTIGRANGLMLRVLLATCVRTNELVKARKELIDLQRGSWFVADETVKTRNGFLVPL 286 Query: 3158035 GEVAHGWIERY--LRDARPALLGARAADALFVTARGDGMTRQQFWNIIKRHAQHAEVRAH 3157862 + WIE L P LL AR + + W I R ++ A Sbjct: 287 VPLVSSWIEELIALSGDSPWLLPARGQQRI-KRLGNTHVGNTTLWAAIDRAFLRGDLEAR 345 Query: 3157861 -LSPHTLRHAFATHLLNHGADLRVVQLLLGH 3157772 +PH R H++N G + ++ L H Sbjct: 346 RFTPHDTRSTAKGHMMNMGIPKEITEIALNH 376 >ref|YP_024938.1|gp18 Length = 637 Score = 286 bits (733), Expect = 5e-75 Identities = 167/354 (47%), Positives = 213/354 (60%), Gaps = 3/354 (0%) Frame = -3 Query: 2878825 MTVTSSAQDISYATDGATTDFQIPFYFLDNAHIVVDKIDANGGLTRLTYGTDFXXXXXXX 2878646 MTVTSS QDISYATDGATT F FYFL+ + VDKID+NG LT L GTD+ Sbjct: 1 MTVTSSNQDISYATDGATTSFPTGFYFLNQNDVFVDKIDSNGVLTPLVLGTDYSVSGAGV 60 Query: 2878645 XXXXXXXXLSVFARGFTLHIYRDVPATQETEYQQNDPFPAKTTEKALDKLTMIAQQNAAA 2878466 V+A G LH+YR VP TQETE+QQNDPFP+KT EKALDKLTM+AQQ AA Sbjct: 61 ETGGAVTTSVVYAPGSMLHLYRLVPPTQETEFQQNDPFPSKTVEKALDKLTMLAQQTRAA 120 Query: 2878465 TQNSIRFPISEYGRDGTLPSAPQRAMNVLGFDVAGNVTMLPVPASVGAGDLRDDILVAGV 2878286 T NSIR+P+SEYG DGTLP +RA +LGFD +G ++P+PAS+GAGDLR++ GV Sbjct: 121 TINSIRYPLSEYGTDGTLPKKAERARKILGFDDSGQQVLIPMPASIGAGDLRNEAWTDGV 180 Query: 2878285 DFIAGVDSSVTLSRAYGTKANL-TVSMDAALQGADTFRL--NGATLTFLDDNGNPAAIPF 2878115 D++AG SSVTLSR+YGTKANL TV M Q ++ + +G TL F + IP Sbjct: 181 DYVAGTSSSVTLSRSYGTKANLGTVVMAGIAQDPASYGIASDGVTLQF------DSVIPV 234 Query: 2878114 GIQKIYVKGGTTLSIYTPPDESVTDAKIAPGSKLDNRITGTIDVRDFGAVGDGVANDTAA 2877935 G+ +I+ GGTTLS+Y P + ++ +VR++GA G+G +DT A Sbjct: 235 GVSRIWCIGGTTLSLYLPTNGAIP------------------NVRNYGATGNGGVDDTLA 276 Query: 2877934 IQAAIDFAQSRFKTDYWSTYVPSVRIPAGTYLVRGLTISYPIHLHGDGQNATTL 2877773 IQ I+ S V +P G YL LT+ + L G ++ L Sbjct: 277 IQECINSLASS---------GGEVFLPPGVYLYSTLTLPPGVSLRGASSFSSVL 321 >ref|NP_061570.1|Orf74 Length = 446 Score = 282 bits (721), Expect = 1e-73 Identities = 162/433 (37%), Positives = 252/433 (58%), Gaps = 1/433 (0%) Frame = -2 Query: 2365238 HSVEAEQSVLGGLLLDNAAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTRPADVVTVY 2365059 HS+EA VLG +L +++ LS F + +Y I L ++ P D++T+ Sbjct: 5 HSLEAGHGVLGAMLKQPHLISVLSEELSPDAFAYSVNADLYRLILDLESAGTPIDIITLA 64 Query: 2365058 EALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISADAFN 2364879 EA D+ +AY+ + N S AN + YA IVR+RA+ R++ VA + A Sbjct: 65 EA--KEFLCDETRTMAYVGEILSNIVSVANAKEYARIVRERAISRQIADVASGVEEVAH- 121 Query: 2364878 PQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPSDVT-G 2364702 Q + + +A++ V + G G +G +L VE + + A D+ G Sbjct: 122 -QNCSIEDKIAQAQALVLGLDAGGTNGECQM--VGDILRDHVEVLQERHDRAQKGDMLDG 178 Query: 2364701 TPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGT 2364522 TG DLD+ T G+ G++I++AGRP+MGKT +MNI VA++ PV V S+EM + Sbjct: 179 LSTGIPDLDQYTQGLKSGQMIVIAGRPAMGKTTLAMNIAADVAIKQNRPVLVISLEMTKS 238 Query: 2364521 QLVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRA 2364342 QL+ R++ ++G + ++ G T ++ +L A K+ +A++ + + + +RS A Sbjct: 239 QLMDRLIAAVGGIPLQNLKDGSCTHKESTELAAATLKLRDAKIAVSDVPVMTMPRIRSIA 298 Query: 2364341 RRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVIALSQLNR 2364162 RR + G LGLI++DYL L+ G +G+ R +++ +SR +K LA+E+ PV+ L QLNR Sbjct: 299 RRQKHRMGDLGLIVIDYLGLVEG--EGKGRVDDVTTMSRQMKLLAREIGCPVLPLCQLNR 356 Query: 2364161 GLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEIIIGKQRNGPIG 2363982 G E RP+KRPV+SDLRESGAIEQDAD+++F+YRDEVY P+S KG EI+I K R+G IG Sbjct: 357 GCESRPDKRPVLSDLRESGAIEQDADIVMFVYRDEVYFPNSDKKGIGEILIRKNRDGEIG 416 Query: 2363981 PVRLTFLGQYTKF 2363943 V +F G ++F Sbjct: 417 SVFTSFQGSKSRF 429 >ref|NP_536389.1|conserved hypothetical protein Length = 223 Score = 265 bits (678), Expect = 1e-68 Identities = 120/221 (54%), Positives = 156/221 (70%), Gaps = 4/221 (1%) Frame = +2 Query: 1484735 VCTHYRAPDEDPGISELKIGIGDLYRRDPWAPDVYPDYAAPIACAAGDGLEVVAAVFGFW 1484914 +CT+YRAPDEDPGISEL++G+ DL++R PW P++YPDY AP +E A FG+W Sbjct: 1 MCTNYRAPDEDPGISELRLGLIDLWKRTPWEPEIYPDYLAPTVAMIDGRVEAFLAGFGYW 60 Query: 1484915 PKFMQPERLDENGRKKKK----LDTVNARAETVGSSRLYGNAWRNGQRCLIPVRWIFEPC 1485082 P+ +Q +++ + K T+N R + +G S LYG AWR G+RCLIP RWI+EPC Sbjct: 61 PRALQKANIEKAKAEGKAPPIMRSTMNVRDDNLGQSPLYGPAWRAGRRCLIPARWIYEPC 120 Query: 1485083 YETGRNVWQRIGIDGWQPCCVAGIWRRYEGDDGRGRVGMAMLTVNADTHPLFARMHRPGE 1485262 YETGRNVW RIG+ W+P CVAGIWR + +DGR MAM+TVNA+ P+ +RMH+PG+ Sbjct: 121 YETGRNVWHRIGLTDWRPYCVAGIWRTLKSEDGRETHTMAMITVNAEGDPIMSRMHKPGD 180 Query: 1485263 EKRGVVMLRRDDYDEWLHVRDVEAARRMLNLLPAADMTAEP 1485385 EKR VV+LR DD++EWL + EAAR ML L PA DM A P Sbjct: 181 EKRSVVILRPDDWEEWLTTSNAEAARAMLQLYPAGDMVAAP 221 >ref|NP_945063.1|gp32 Length = 223 Score = 265 bits (678), Expect = 1e-68 Identities = 120/221 (54%), Positives = 156/221 (70%), Gaps = 4/221 (1%) Frame = +2 Query: 1484735 VCTHYRAPDEDPGISELKIGIGDLYRRDPWAPDVYPDYAAPIACAAGDGLEVVAAVFGFW 1484914 +CT+YRAPDEDPGISEL++G+ DL++R PW P++YPDY AP +E A FG+W Sbjct: 1 MCTNYRAPDEDPGISELRLGLIDLWKRTPWEPEIYPDYLAPTVAMIDGRVEAFLAGFGYW 60 Query: 1484915 PKFMQPERLDENGRKKKK----LDTVNARAETVGSSRLYGNAWRNGQRCLIPVRWIFEPC 1485082 P+ +Q +++ + K T+N R + +G S LYG AWR G+RCLIP RWI+EPC Sbjct: 61 PRALQKANIEKAKAEGKAPPIMRSTMNVRDDNLGQSPLYGPAWRAGRRCLIPARWIYEPC 120 Query: 1485083 YETGRNVWQRIGIDGWQPCCVAGIWRRYEGDDGRGRVGMAMLTVNADTHPLFARMHRPGE 1485262 YETGRNVW RIG+ W+P CVAGIWR + +DGR MAM+TVNA+ P+ +RMH+PG+ Sbjct: 121 YETGRNVWHRIGLTDWRPYCVAGIWRTLKSEDGRETHTMAMITVNAEGDPIMSRMHKPGD 180 Query: 1485263 EKRGVVMLRRDDYDEWLHVRDVEAARRMLNLLPAADMTAEP 1485385 EKR VV+LR DD++EWL + EAAR ML L PA DM A P Sbjct: 181 EKRSVVILRPDDWEEWLTTSNAEAARAMLQLYPAGDMVAAP 221 >ref|NP_818250.1|gp199 Length = 1131 Score = 252 bits (643), Expect = 1e-64 Identities = 194/647 (29%), Positives = 307/647 (47%), Gaps = 59/647 (9%) Frame = -2 Query: 2903018 ERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNN-------GVP------VG 2902878 ++ D Y +RLE+E I GYF +VAD++ A+N G P G Sbjct: 331 DKGLPEDVYRQRLEYEAKLIIDKNMAGYFNVVADYVLAARNGTYHQAITGDPKPKPCLCG 390 Query: 2902877 PGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYVK 2902698 PGRGS GSLV Y +GIT +DP++Y+L+FERF+NP+R PD D+DF + + V QY+ Sbjct: 391 PGRGSAGGSLVTYVMGITSIDPIKYDLMFERFINPDRPDFPDIDVDFQKSKKGLVKQYLG 450 Query: 2902697 EKYGADAVSQIATFGTMAAKAAVRDIGRV--LDLGYM-----FTDGIAKLIPFKPGKHV- 2902542 ++YG + V I T + ++D+ R + G M + + ++ PF+ G + Sbjct: 451 KRYGDNNVVSIGTRTHSRPRQMLQDLCRAQGIPFGEMKKMIDLVEQVDQIAPFEEGMELP 510 Query: 2902541 ------TIADAMKEEPQLQERYDHEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKL- 2902383 T + ++E E + + L +L +++ + R VG+H GVL+ + Sbjct: 511 EDEDPPTWGEVLQEIG--GELAPYAKKYPDLFNLMEQMVNMVRGVGVHPAGVLVNTDPVF 568 Query: 2902382 TDFCPLYTQGDDGGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWA-----ERYIRRLD- 2902221 P +G +Q+D ++E +G VK D L L +LD A ER+ +D Sbjct: 569 PGLIPTRRKGGADIRATQFDMYELEELGGVKDDLLANKGLDVLDIARDLIYERHGVWIDY 628 Query: 2902220 -------PSKADWALA---QVPLDDPASFQILKKANTVAVFQLESRGMQGMLKDAQPDRF 2902071 P A+ + + L+DPA + + + T +FQ+ + + +P Sbjct: 629 DGFGFGIPEGAEKVITLNEERYLNDPAIYDQIDRGQTAGLFQVNTPAGTKLAMRFRPRSV 688 Query: 2902070 EDIIALVSLYRPGPM---DLIPSFCARKHGREKVEYPDPRVEPVL-----KETYGIMVYQ 2901915 D+ L S+ RPG L+ + R+HGRE+V Y P +E + TYGI+VYQ Sbjct: 689 VDMADLASINRPGVTRVPGLLDKYIERRHGREQVTYDHPLMESITGPSSSMNTYGILVYQ 748 Query: 2901914 EQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHREIFAEGAATN------GLTREKS 2901753 EQ+++ A+ + G++ G A+ LR+ +GKKK E + + F +G N G TR+ + Sbjct: 749 EQLIRTAKELAGFTPGEAERLRKGIGKKKMEIINELEPKFLDGCMANPEFVNQGGTRKVA 808 Query: 2901752 DEIFDLMEKFAGYGFNKSHXXXXXXXXXXXXXXXAHHPAEFMAANMTLAMDDTDKVKILF 2901573 D I+ ++ Y FNKSH ++ EF+ + + TDK Sbjct: 809 DRIWQSLKAAGAYAFNKSHGVGYALQPCQEAWVKHYYFDEFITGCLVI---HTDKTIRFL 865 Query: 2901572 DDCVVNNLAVLPPDINQSHYRFEPVAEADGKRSRTIRYGLGAVKGSGQNAIEEILRAREE 2901393 +C AVLPPD+NQS F E IR+GL + G G A+ +IL R Sbjct: 866 RECRQRKRAVLPPDVNQSGAGFTLTDEG-------IRFGLTDISGIGDAAMPDILANR-- 916 Query: 2901392 KAFTDLFDFCERIDRR-VVNRRTVEALIRAGAFDSLNTNRAQLIASV 2901255 F DL DF R + + V+ALI+ GAFD +R ++ V Sbjct: 917 -PFKDLDDFLARASKSGGAKKGVVDALIKVGAFDFTGEHRQVMLEKV 962 Score = 177 bits (450), Expect = 3e-42 Identities = 158/560 (28%), Positives = 260/560 (46%), Gaps = 61/560 (10%) Frame = -2 Query: 3452222 QGVPEKVSKQ-IRYELDLIAQLSYEPFFLTVYDIVKYARS-------------QNILC-Q 3452088 +G+PE V +Q + YE LI + +F V D V AR+ + LC Sbjct: 332 KGLPEDVYRQRLEYEAKLIIDKNMAGYFNVVADYVLAARNGTYHQAITGDPKPKPCLCGP 391 Query: 3452087 GRGSAANSVVCFCLGITEVNPEQSTMLFERFISAERGEPPDIDVDFEHQRREEVIQHIYE 3451908 GRGSA S+V + +GIT ++P + ++FERFI+ +R + PDIDVDF+ ++ V Q++ + Sbjct: 392 GRGSAGGSLVTYVMGITSIDPIKYDLMFERFINPDRPDFPDIDVDFQKSKKGLVKQYLGK 451 Query: 3451907 KYGHNRAALAAAVSTYRPRGVLRETGKALGVD-----PML-----VDRVAKAHRWFDGSR 3451758 +YG N + RPR +L++ +A G+ M+ VD++A + Sbjct: 452 RYGDNNVVSIGTRTHSRPRQMLQDLCRAQGIPFGEMKKMIDLVEQVDQIAPFEEGMELPE 511 Query: 3451757 D--------LLQQFSTIGLDPETPLIXXXXXXXXXXLNFPRHLSQHSGGFVISRGKL-TR 3451605 D +LQ+ L P +N R + H G +++ + Sbjct: 512 DEDPPTWGEVLQEIGG-ELAPYAKKYPDLFNLMEQMVNMVRGVGVHPAGVLVNTDPVFPG 570 Query: 3451604 LVPVENAAMDGRRVIQWDKDDLEALGLMKVDVLALGMLSALHRAFDM----RTAWR---- 3451449 L+P R Q+D +LE LG +K D+LA L L A D+ W Sbjct: 571 LIPTRRKGGADIRATQFDMYELEELGGVKDDLLANKGLDVLDIARDLIYERHGVWIDYDG 630 Query: 3451448 ---GPPEPDGEPFTLKHIPQ-DDKATYDMICRADTVGVFQIESRAQMSMLPRLRPQTYYD 3451281 G PE + TL +D A YD I R T G+FQ+ + A + R RP++ D Sbjct: 631 FGFGIPEGAEKVITLNEERYLNDPAIYDQIDRGQTAGLFQVNTPAGTKLAMRFRPRSVVD 690 Query: 3451280 LVIEVAIVRPGPIQ-GGAVHPYLKRRQGIEKVSYPKEELKP-----ALERTYGVPIFQEQ 3451119 + +I RPG + G + Y++RR G E+V+Y ++ + TYG+ ++QEQ Sbjct: 691 MADLASINRPGVTRVPGLLDKYIERRHGREQVTYDHPLMESITGPSSSMNTYGILVYQEQ 750 Query: 3451118 VMQIAMIAAGFTPGEADQLRRAMAAWKRKGNLEQYHRKIVDGMRERDYPPDF-------- 3450963 +++ A AGFTPGEA++LR+ + K+ + + K +DG P+F Sbjct: 751 LIRTAKELAGFTPGEAERLRKGIGK-KKMEIINELEPKFLDGCMAN---PEFVNQGGTRK 806 Query: 3450962 -AEQIFEQIKGFGDYGFPESHAASFAKLAYASSWLKCHEPAIFLAALLNSQPMGFYPPSQ 3450786 A++I++ +K G Y F +SH +A +W+K + F+ L + + Sbjct: 807 VADRIWQSLKAAGAYAFNKSHGVGYALQPCQEAWVKHYYFDEFITGCL---VIHTDKTIR 863 Query: 3450785 LVQDAKRHGVQVLPIDVTQS 3450726 +++ ++ VLP DV QS Sbjct: 864 FLRECRQRKRAVLPPDVNQS 883 Score = 42.4 bits (98), Expect = 0.23 Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 3/105 (2%) Frame = -2 Query: 3453134 AELFCRSNFSFLHGASHAEELVERAFELGYRGIAITDECSLAGAPRMHVAAKAKGLPLVI 3452955 A L S L G S EE+ RA E G +AITD + G R A +A G+ V+ Sbjct: 6 AALHNHGETSILDGRSRPEEMAARAKECGDESVAITDHDDVGGHFRFQKACQAAGVKPVL 65 Query: 3452954 GSYFDVTPDEVAPGHDPGPGAFG---LVLLAQNREGYGNLSELIS 3452829 G+ +A + GA +VLLA+N G NL L S Sbjct: 66 GAE-QRWMLNIADSRERKTGASDSSHIVLLAENNTGLRNLWALSS 109 Score = 41.6 bits (96), Expect = 0.39 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -2 Query: 2620541 MPTMNADLHCHSNVS--DGLLSPADVARRAHAGGVTLWALTDHDEIGGQAAARSEAEALG 2620368 M + A LH H S DG P ++A RA G A+TDHD++GG + +A G Sbjct: 1 MSSGKAALHNHGETSILDGRSRPEEMAARAKECGDESVAITDHDDVGGHFRFQKACQAAG 60 Query: 2620367 MRYLSGVE 2620344 ++ + G E Sbjct: 61 VKPVLGAE 68 >ref|NP_958219.1|gene 44 protein Length = 478 Score = 238 bits (607), Expect = 2e-60 Identities = 151/445 (33%), Positives = 238/445 (53%), Gaps = 17/445 (3%) Frame = -2 Query: 2365259 ESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQ---GDFYRYDHRIIYEHIGRLIAS 2365089 ++ PPHS+EAEQ+V+GGLLLD+ + +R+ L+ FY H+II+E I R+ Sbjct: 3 DNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKIIFEEITRMHRE 62 Query: 2365088 TRPADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSV 2364909 +P D +T+++ L VGG AY+ +A+NTPSAANI YA VR+ A+ R ++ Sbjct: 63 KKPVDGLTLFDELERKSLTASVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINR 122 Query: 2364908 ADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGARGNQ-GFLEIGPLLTQVVERIDTLY 2364732 E + ++ G Q + +S + + G++ G G ++ V ++ + Sbjct: 123 MTEATELLYSRNGMTATQKYEAIQSIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKRF 182 Query: 2364731 HTANPSDVTGTPTGFVDLDRMTS--GMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGL 2364558 + + G TG LDRM S G+ G L ++ RP MGKT + AV Sbjct: 183 DPSG--EQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKK 240 Query: 2364557 PVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDED----------WPKLTHAVQKM 2364408 P +FS+EMPG Q++ +++G ++ + D D + + ++ Sbjct: 241 PALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANRL 300 Query: 2364407 SEAQ-LFIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEI 2364231 SE L+ID+T GL+ ++ S +RR+ R+ G +G+I+VDYL LM+ N I Sbjct: 301 SEIDMLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLA-YGMI 359 Query: 2364230 SRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVY 2364051 ++ LK+LAKELD V+ L+QLNR LE R NKRP+ SD R++G IEQD D + I+R+ + Sbjct: 360 TKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAF 419 Query: 2364050 NPDSPDKGTAEIIIGKQRNGPIGPV 2363976 + DS G E+I+ R+G G V Sbjct: 420 D-DSVPPGETELILRLNRHGNTGTV 443 >ref|NP_037693.1|gene P protein Length = 478 Score = 238 bits (607), Expect = 2e-60 Identities = 151/445 (33%), Positives = 238/445 (53%), Gaps = 17/445 (3%) Frame = -2 Query: 2365259 ESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQ---GDFYRYDHRIIYEHIGRLIAS 2365089 ++ PPHS+EAEQ+V+GGLLLD+ + +R+ L+ FY H+II+E I R+ Sbjct: 3 DNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKIIFEEITRMHRE 62 Query: 2365088 TRPADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSV 2364909 +P D +T+++ L VGG AY+ +A+NTPSAANI YA VR+ A+ R ++ Sbjct: 63 QKPVDGLTLFDELERKSLTASVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINR 122 Query: 2364908 ADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGARGNQ-GFLEIGPLLTQVVERIDTLY 2364732 E + ++ G Q + +S + + G++ G G ++ V ++ + Sbjct: 123 MTEATELLYSRNGMTATQKYEAIQSIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKRF 182 Query: 2364731 HTANPSDVTGTPTGFVDLDRMTS--GMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGL 2364558 + + G TG LDRM S G+ G L ++ RP MGKT + AV Sbjct: 183 DPSG--EQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKK 240 Query: 2364557 PVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDED----------WPKLTHAVQKM 2364408 P +FS+EMPG Q++ +++G ++ + D D + + ++ Sbjct: 241 PALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANRL 300 Query: 2364407 SEAQ-LFIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEI 2364231 SE L+ID+T GL+ ++ S +RR+ R+ G +G+I+VDYL LM+ N I Sbjct: 301 SEIDMLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLA-YGMI 359 Query: 2364230 SRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVY 2364051 ++ LK+LAKELD V+ L+QLNR LE R NKRP+ SD R++G IEQD D + I+R+ + Sbjct: 360 TKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAF 419 Query: 2364050 NPDSPDKGTAEIIIGKQRNGPIGPV 2363976 + DS G E+I+ R+G G V Sbjct: 420 D-DSVPPGETELILRLNRHGNTGTV 443 >ref|NP_859372.1|P protein Length = 483 Score = 238 bits (606), Expect = 3e-60 Identities = 154/446 (34%), Positives = 239/446 (53%), Gaps = 18/446 (4%) Frame = -2 Query: 2365259 ESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQ---GDFYRYDHRIIYEHIGRLIAS 2365089 ++ PPHS+EAEQ+V+GGLLLD+ + +R+ L+ FY H+II+E I R+ Sbjct: 8 DNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKIIFEEITRMHRE 67 Query: 2365088 TRPADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSV 2364909 +P D +T+++ L VGG AY+ +A+NTPSAANI YA VR+ A+ R ++ Sbjct: 68 QKPVDGLTLFDELERKSLTASVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINR 127 Query: 2364908 ADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGAR--GNQGFLEIGPLLTQVVERIDTL 2364735 E + ++ G Q EA +F+ D A+ +G G ++ V ++ Sbjct: 128 MTEATELLYSRNGMTATQKY-EAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKR 186 Query: 2364734 YHTANPSDVTGTPTGFVDLDRMTS--GMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYG 2364561 + + + G TG LDRM S G+ G L ++ RP MGKT + AV Sbjct: 187 FDPSG--EQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEK 244 Query: 2364560 LPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDED----------WPKLTHAVQK 2364411 P +FS+EMPG Q++ +++G ++ + D D + + + Sbjct: 245 KPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANR 304 Query: 2364410 MSEAQL-FIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISE 2364234 +SE L +ID+T GL+ ++ S +RR+ R+ G +G+I+VDYL LM+ N Sbjct: 305 LSEIDLLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLA-YGM 363 Query: 2364233 ISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEV 2364054 I++ LK+LAKELD V+ L+QLNR LE R NKRP+ SD R++G IEQD D + I+R+ Sbjct: 364 ITKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGA 423 Query: 2364053 YNPDSPDKGTAEIIIGKQRNGPIGPV 2363976 ++ DS G E+I+ R+G G V Sbjct: 424 FD-DSVPPGETELILRLNRHGNTGTV 448 >ref|NP_859206.1|P protein Length = 483 Score = 238 bits (606), Expect = 3e-60 Identities = 154/446 (34%), Positives = 239/446 (53%), Gaps = 18/446 (4%) Frame = -2 Query: 2365259 ESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQ---GDFYRYDHRIIYEHIGRLIAS 2365089 ++ PPHS+EAEQ+V+GGLLLD+ + +R+ L+ FY H+II+E I R+ Sbjct: 8 DNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKIIFEEITRMHRE 67 Query: 2365088 TRPADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSV 2364909 +P D +T+++ L VGG AY+ +A+NTPSAANI YA VR+ A+ R ++ Sbjct: 68 QKPVDGLTLFDELERKSLTASVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINR 127 Query: 2364908 ADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGAR--GNQGFLEIGPLLTQVVERIDTL 2364735 E + ++ G Q EA +F+ D A+ +G G ++ V ++ Sbjct: 128 MTEATELLYSRNGMTATQKY-EAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKR 186 Query: 2364734 YHTANPSDVTGTPTGFVDLDRMTS--GMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYG 2364561 + + + G TG LDRM S G+ G L ++ RP MGKT + AV Sbjct: 187 FDPSG--EQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEK 244 Query: 2364560 LPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDED----------WPKLTHAVQK 2364411 P +FS+EMPG Q++ +++G ++ + D D + + + Sbjct: 245 KPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANR 304 Query: 2364410 MSEAQL-FIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISE 2364234 +SE L +ID+T GL+ ++ S +RR+ R+ G +G+I+VDYL LM+ N Sbjct: 305 LSEIDLLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLA-YGM 363 Query: 2364233 ISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEV 2364054 I++ LK+LAKELD V+ L+QLNR LE R NKRP+ SD R++G IEQD D + I+R+ Sbjct: 364 ITKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGA 423 Query: 2364053 YNPDSPDKGTAEIIIGKQRNGPIGPV 2363976 ++ DS G E+I+ R+G G V Sbjct: 424 FD-DSVPPGETELILRLNRHGNTGTV 448 >ref|NP_050526.1|similar to P protein of bacteriophage HK022 Length = 483 Score = 238 bits (606), Expect = 3e-60 Identities = 154/446 (34%), Positives = 239/446 (53%), Gaps = 18/446 (4%) Frame = -2 Query: 2365259 ESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQ---GDFYRYDHRIIYEHIGRLIAS 2365089 ++ PPHS+EAEQ+V+GGLLLD+ + +R+ L+ FY H+II+E I R+ Sbjct: 8 DNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKIIFEEITRMHRE 67 Query: 2365088 TRPADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSV 2364909 +P D +T+++ L VGG AY+ +A+NTPSAANI YA VR+ A+ R ++ Sbjct: 68 QKPVDGLTLFDELERKSLTASVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINR 127 Query: 2364908 ADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGAR--GNQGFLEIGPLLTQVVERIDTL 2364735 E + ++ G Q EA +F+ D A+ +G G ++ V ++ Sbjct: 128 MTEATELLYSRNGMTATQKY-EAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKR 186 Query: 2364734 YHTANPSDVTGTPTGFVDLDRMTS--GMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYG 2364561 + + + G TG LDRM S G+ G L ++ RP MGKT + AV Sbjct: 187 FDPSG--EQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEK 244 Query: 2364560 LPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDED----------WPKLTHAVQK 2364411 P +FS+EMPG Q++ +++G ++ + D D + + + Sbjct: 245 KPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANR 304 Query: 2364410 MSEAQL-FIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISE 2364234 +SE L +ID+T GL+ ++ S +RR+ R+ G +G+I+VDYL LM+ N Sbjct: 305 LSEIDLLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLA-YGM 363 Query: 2364233 ISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEV 2364054 I++ LK+LAKELD V+ L+QLNR LE R NKRP+ SD R++G IEQD D + I+R+ Sbjct: 364 ITKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGA 423 Query: 2364053 YNPDSPDKGTAEIIIGKQRNGPIGPV 2363976 ++ DS G E+I+ R+G G V Sbjct: 424 FD-DSVPPGETELILRLNRHGNTGTV 448 >ref|NP_720303.1|gp12 Length = 478 Score = 237 bits (605), Expect = 4e-60 Identities = 154/446 (34%), Positives = 239/446 (53%), Gaps = 18/446 (4%) Frame = -2 Query: 2365259 ESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQ---GDFYRYDHRIIYEHIGRLIAS 2365089 ++ PPHS+EAEQ+V+GGLLLD+ + +R+ L+ FY H+I++E I R+ Sbjct: 3 DNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHRE 62 Query: 2365088 TRPADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSV 2364909 +P D +T+++ L VGG AY+ +A+NTPSAANI YA VR+ A+ R ++ Sbjct: 63 QKPVDGLTLFDELERKSLTVSVGGFAYIADIAKNTPSAANIVAYAMQVRETAMERYAINR 122 Query: 2364908 ADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGAR--GNQGFLEIGPLLTQVVERIDTL 2364735 E + ++ G Q EA +F+ D A+ +G G ++ V +D Sbjct: 123 MTEATELLYSRNGMTATQKY-EAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVGDLDKR 181 Query: 2364734 YHTANPSDVTGTPTGFVDLDRMTS--GMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYG 2364561 + + + G TG LDRM S G+ G L ++ RP MGKT + AV Sbjct: 182 FDPSG--EQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEK 239 Query: 2364560 LPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDED----------WPKLTHAVQK 2364411 P +FS+EMPG Q++ +++G ++ + D D + + + Sbjct: 240 KPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANR 299 Query: 2364410 MSEAQ-LFIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISE 2364234 +SE L+ID+T GL+ ++ S +RR+ R+ G +G+I+VDYL LM+ N Sbjct: 300 LSEIDMLYIDDTPGLSLAQIVSESRRIKREKGCIGMILVDYLTLMTAEKADRNDLA-YGM 358 Query: 2364233 ISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEV 2364054 I++ LK+LAKELD V+ L+QLNR LE R NKRP+ SD R++G IEQD D + I+R+ Sbjct: 359 ITKGLKNLAKELDCVVVLLTQLNRALENRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGA 418 Query: 2364053 YNPDSPDKGTAEIIIGKQRNGPIGPV 2363976 ++ DS G E+I+ R+G G V Sbjct: 419 FD-DSVPPGETELILRLNRHGNTGTV 443 >ref|NP_112058.1|replication protein P Length = 478 Score = 237 bits (604), Expect = 5e-60 Identities = 153/446 (34%), Positives = 239/446 (53%), Gaps = 18/446 (4%) Frame = -2 Query: 2365259 ESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQ---GDFYRYDHRIIYEHIGRLIAS 2365089 ++ PPHS+EAEQ+V+GGLLLD+ + +R+ L+ FY H+I++E I R+ Sbjct: 3 DNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHRE 62 Query: 2365088 TRPADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSV 2364909 +P D +T+++ L VGG AY+ +A+NTPSAANI YA VR+ A+ R ++ Sbjct: 63 QKPVDGLTLFDELERKSLTASVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINR 122 Query: 2364908 ADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGAR--GNQGFLEIGPLLTQVVERIDTL 2364735 E + ++ G Q EA +F+ D A+ +G G ++ V ++ Sbjct: 123 MTEATELLYSRNGMTATQKY-EAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKR 181 Query: 2364734 YHTANPSDVTGTPTGFVDLDRMTS--GMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYG 2364561 + + + G TG LDRM S G+ G L ++ RP MGKT + AV Sbjct: 182 FDPSG--EQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEK 239 Query: 2364560 LPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDED----------WPKLTHAVQK 2364411 P +FS+EMPG Q++ +++G ++ + D D + + + Sbjct: 240 KPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANR 299 Query: 2364410 MSEAQ-LFIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISE 2364234 +SE L+ID+T GL+ ++ S +RR+ R+ G +G+I+VDYL LM+ N Sbjct: 300 LSEIDMLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLA-YGM 358 Query: 2364233 ISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEV 2364054 I++ LK+LAKELD V+ L+QLNR LE R NKRP+ SD R++G IEQD D + I+R+ Sbjct: 359 ITKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGA 418 Query: 2364053 YNPDSPDKGTAEIIIGKQRNGPIGPV 2363976 ++ DS G E+I+ R+G G V Sbjct: 419 FD-DSVPPGETELILRLNRHGNTGTV 443 >ref|NP_690733.1|DNA helicase Length = 442 Score = 236 bits (603), Expect = 6e-60 Identities = 147/435 (33%), Positives = 241/435 (55%), Gaps = 5/435 (1%) Frame = -2 Query: 2365226 AEQSVLGGLLLDNAAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTRPADVVTVYEALT 2365047 AEQ+VLG +L + L+ F H IY + L + D ++ A Sbjct: 15 AEQAVLGSILTEPELIKECP--LTPEHFSPGKHFNIYFTMQDLDRKGQSVDFTSI--AAR 70 Query: 2365046 TSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISADAFNPQGK 2364867 K +GG YL LA + S +++ + V + R+ +S+A +I + Sbjct: 71 VGEKLPQLGGFGYLTELAASVASTTTFKQHCQTVSEYFQKRKAISIAQQIIENVNESDDG 130 Query: 2364866 EVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPSD--VTGTPT 2364693 V+ + EA S++ I G + G ++ E + T+Y +D +TG P+ Sbjct: 131 PVKPI-QEAVSELMEIEASGTDDDDGSID---------EALVTVYEEIESADGNITGVPS 180 Query: 2364692 GFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGTQLV 2364513 GF +LDRMT G +++A RPSMGKTAF++ + ++ + V + S+EM + + Sbjct: 181 GFTELDRMTYGYKRRNFVLIAARPSMGKTAFALKQAKNMSDNDDV-VNLHSLEMGKKENI 239 Query: 2364512 MRMLGSIGRLDQHRMRTGR--LTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRAR 2364339 R++ + G ++ +++ R EDW KL+ A+ ++S + + I + G + + S+ R Sbjct: 240 KRLIVTAGSINAQKIKAARRDFASEDWGKLSMAIGEISNSNINIFDKAGQSVNYIWSKTR 299 Query: 2364338 RLARQC-GKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVIALSQLNR 2364162 + R+ GK ++++DYLQL+ + ++R +IS+ISR LK +A+ELDV VIALSQL+R Sbjct: 300 QTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQLSR 359 Query: 2364161 GLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEIIIGKQRNGPIG 2363982 +EQR +KRP++SDLRESG +EQDAD+I F+YRD+ Y+ +S K E+II K R+GP+G Sbjct: 360 QVEQRQDKRPMLSDLRESGQLEQDADIIEFLYRDDYYDKESESKNIVEVIIAKHRDGPVG 419 Query: 2363981 PVRLTFLGQYTKFDN 2363937 V L F+ +Y F N Sbjct: 420 TVSLAFIKEYGNFVN 434 >ref|YP_195185.1|ribonucleotide reductase A subunit Length = 776 Score = 231 bits (588), Expect = 3e-58 Identities = 200/713 (28%), Positives = 308/713 (43%), Gaps = 23/713 (3%) Frame = +3 Query: 711366 TGINVVD-NGVTRPLDLNALRALVVSACDGLGAAVNPDPIVAETVKNLYDGVPMSQVYDS 711542 T INV +G PL+L + +V AC+ L A V+ + + +DG+ + + Sbjct: 6 TTINVKKRDGSIEPLNLEKVHKMVEEACEDL-AGVSASQVEMHSGIQFHDGITTENIQEI 64 Query: 711543 AILAARTMIEKD-PAYSQVTSRILLHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDA 711719 I +A +I D P Y V +R+LL +R+++ + V + M + Y V Sbjct: 65 LIRSASDLISLDNPNYQYVAARLLLFGLRKQVFNKNVWKDGMPSAYDVALYNVTINKVYD 124 Query: 711720 GXXXXXXXXXXXXXXGEALDANRDLQFGYLGLQTLYDRYFLH--VEGTRIEMPQAFFMRV 711893 +D +RD F Y GL+ + D+Y + G E PQ ++ + Sbjct: 125 EDLLDKYSDEDWVKVNNMIDHDRDYLFTYAGLRQVVDKYLVQDRSSGEIYETPQYMYLFI 184 Query: 711894 AMGLSLNE--IDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDG 712067 AM L + R +YN +S TP + T Q +SC L D LD Sbjct: 185 AMTLFADYPISQRLDYVRRYYNAISKHKINIPTPIMAGVRTTLRQFASCVLIDSDDTLDS 244 Query: 712068 IYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 712247 I+ + G+G + R+R + S I+G K GV+PFLK T Q G Sbjct: 245 IFTSDMAIGKYVAQRAGIGINAGRIRGVNSKIRGGEVKHTGVIPFLKKFEATVRCCTQNG 304 Query: 712248 KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLF 712427 R G+ + WH +IE+ + L+ N G + R ++ + I LF +R + + +LF Sbjct: 305 IRGGSATVHFPIWHQEIEDIIVLKNNKGTEDNRVRKLDYSIQISKLFYERFISNGEISLF 364 Query: 712428 SPSTCPDLHDKFGAE-FEAAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWI 712604 SP P L+D FG + F+ Y YE R K I A +L+ +L ETG ++ Sbjct: 365 SPHDVPGLYDAFGTDRFDELYVGYE----RDTSVPRKTIGAQELFLDLLKERAETGRVYV 420 Query: 712605 TFKDPCNVRSPQQHVGVVHSSNLCTEITLNT-------SDSEIAVCNLGSVNLVAHLVKQ 712763 D CN S V+ SNLC EITL T + EIA+C L ++N A +K Sbjct: 421 MNIDHCN--SHSSFKDKVNMSNLCQEITLPTDPLHQIDGNGEIALCILSAIN--AGKLKN 476 Query: 712764 ADGSFALDHDKLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHL 712943 D+L+ +A+R L+ +ID Y V A S R +G+G +G L Sbjct: 477 L--------DELEELCDLAVRGLEELIDYQNYPVKAAEVSTKNRRSLGIGYIGLAHYLAK 528 Query: 712944 LRTPYASEAAVAFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQDTLKLL 713123 Y A E+ +Y +S E+A+E+G + + + GILP DT K Sbjct: 529 QGVKYDDPQAWQLVHELTESFQFYLLKSSNEIAKEKGACGYFDRTKYSDGILPIDTYKSD 588 Query: 713124 AEARGGYVEVDTSESLDWTSLRSRIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQN 713303 + V + DW +LRS I T G+R+S A P+ + S + + IEP Sbjct: 589 VDE-----IVPNKLNHDWETLRSEIRTFGLRHSTLSAQMPSESSSVVSNETNGIEPPRDY 643 Query: 713304 LYVKSNLSGEF--------TVVNEY-LVRDLKERGLWDEVMVADLKYFDGMLS 713435 L VK + G T+ N Y L+ D+ + V+ K+FD +S Sbjct: 644 LSVKKSKKGPLKQIVPQYQTLKNNYTLLWDMPNNTGYINVVAVMQKFFDQAIS 696 >ref|NP_852741.1|putative DNA replication protein P Length = 485 Score = 228 bits (581), Expect = 2e-57 Identities = 145/445 (32%), Positives = 238/445 (53%), Gaps = 18/445 (4%) Frame = -2 Query: 2365262 IESLKVPPHSVEAEQSVLGGLLLDNAAWDRIA--DFLSQGDFYRYDHRIIYEHIGRLIAS 2365089 +E+LK+ P+++ AEQ VLG L+ + + D + DF+ FYR++H+ I+ I L + Sbjct: 1 MENLKIVPYNLGAEQCVLGALMFGSLSKDALVVLDFVKPESFYRFEHQHIFAEIQALAKN 60 Query: 2365088 TRPADVVTVYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSV 2364909 +P D++TV L+T G + +GG AYL LA NTPSAANIR YAEIVR+ A+ R ++ Sbjct: 61 NQPIDLMTVESRLSTKGVLEQIGGFAYLAELANNTPSAANIRAYAEIVREDAIKRFTIAK 120 Query: 2364908 ADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIG-PLLTQVVERIDTLY 2364732 + A + ++ + I++ G L G + T +++ Sbjct: 121 LQDCEALILAQNDLKAADRIEAISCVMSEISDYSRTGKSKGLRSGRDVGTDWLDKYQ--L 178 Query: 2364731 HTANPSDVTGTPTGFVDLDRM--TSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGL 2364558 P V G TG LD + G+ L+ + RP GKTAF + E + Sbjct: 179 RLEQPESVRGILTGIKALDEVIGLKGLVKQSLVALGARPKCGKTAFYSLMAENCILNEKK 238 Query: 2364557 PVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDEDW------------PKLTHAV- 2364417 PV +FS+EM Q+ RML ++ + + L D+++ ++T +V Sbjct: 239 PVLLFSLEMSAEQIFERMLVKRANINANSLYDTGLNDDEFYLKYHLHKDTVMTRVTQSVG 298 Query: 2364416 QKMSEAQLFIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEIS 2364237 + +++ L++D+T ++ +RS RR+ R+ G +G I +DYL LM + + E Sbjct: 299 ELVNDDLLYVDDTPNVSMSHIRSECRRIKRERGDIGFIGIDYLTLMK-AEKAERNDLAYG 357 Query: 2364236 EISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDE 2364057 ++++ LK+LA+E+D V+ L+QLNRGLE R +KRP+ SD R++G IEQ+ D L +Y++ Sbjct: 358 QVTKELKNLAREMDCVVLLLTQLNRGLESRSDKRPMPSDSRDTGQIEQECDYWLGLYKES 417 Query: 2364056 VYNPDSPDKGTAEIIIGKQRNGPIG 2363982 VYN ++ D EII+ R+G G Sbjct: 418 VYN-ENADPSLTEIIVRLNRHGGTG 441 >ref|NP_690734.1|hypothetical protein Length = 300 Score = 210 bits (534), Expect = 6e-52 Identities = 112/277 (40%), Positives = 179/277 (64%), Gaps = 5/277 (1%) Frame = -2 Query: 2364752 ERIDTLYHTANPSD--VTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEY 2364579 E + T+Y +D +TG P+GF +LDRMT G +++A RPSMGKTAF++ + Sbjct: 17 EALVTVYEEIESADGNITGVPSGFTELDRMTYGYKRRNFVLIAARPSMGKTAFALKQAKN 76 Query: 2364578 VAVEYGLPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGR--LTDEDWPKLTHAVQKMS 2364405 ++ + V + S+EM + + R++ + G ++ +++ R EDW KL+ A+ ++S Sbjct: 77 MSDNDDV-VNLHSLEMGKKENIKRLIVTAGSINAQKIKAARRDFASEDWGKLSMAIGEIS 135 Query: 2364404 EAQLFIDETGGLNPMELRSRARRLARQC-GKLGLIIVDYLQLMSGSSQGENRATEISEIS 2364228 + + I + G + + S+ R+ R+ GK ++++DYLQL+ + ++R +IS+IS Sbjct: 136 NSNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQIS 195 Query: 2364227 RSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYN 2364048 R LK +A+ELDV VIALSQL+R +EQR +KRP++SDLRESG +EQDAD+I F+YRD+ Y+ Sbjct: 196 RDLKKMARELDVVVIALSQLSRQVEQRQDKRPMLSDLRESGQLEQDADIIEFLYRDDYYD 255 Query: 2364047 PDSPDKGTAEIIIGKQRNGPIGPVRLTFLGQYTKFDN 2363937 +S K E+II K R+GP+G V L F+ +Y F N Sbjct: 256 KESESKNIVEVIIAKHRDGPVGTVSLAFIKEYGNFVN 292 >ref|NP_899523.1|aerobic ribonucleoside diphosphate reductase large subunit Length = 741 Score = 208 bits (530), Expect = 2e-51 Identities = 188/683 (27%), Positives = 296/683 (43%), Gaps = 27/683 (3%) Frame = +3 Query: 711378 VVDNGVTRPLDLNALRALVVSACDGLGAAVNPDPIVAETVKNLYDGVPMSQVYDSAI-LA 711554 V +G+T + + L ++ AC ++P ++A L DG+ + +AI +A Sbjct: 4 VKSSGITEEFEESKLMRVLSDACKN--TTIDPHQLLARVKAQLSDGMTSKDIQKAAIKIA 61 Query: 711555 ARTMIEKDPAYSQVTSRILLHTIRREILGE-------EVVQAEMSTRYAEYFPQFLKRGV 711713 A ++ ++P Y V +R+ ++ +R+++ G+ +++ E +T Y + L++ Sbjct: 62 ADSISVEEPDYQYVAARLAMYGLRKDVYGQFDPIPFKQLI--ERNTAIEVYDSEILEKWS 119 Query: 711714 DAGXXXXXXXXXXXXXXGEALDANRDLQFGYLGLQTLYDRYFLHVEGTRI--EMPQAFFM 711887 D+ + RD F Y G+ ++Y GT E PQ +M Sbjct: 120 DSELEYLE----------SQVKHERDFDFAYAGVMQFKEKYLCKNRGTGAIYETPQYAYM 169 Query: 711888 RVAMGLSLNE-IDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLD 712064 +AM L E DR I+FYN +S+ TP + T Q SSC D L Sbjct: 170 LIAMCLHQEEKYDRLKHVIDFYNAVSTQKLSLPTPIMAGVRTPTRQFSSCVKIESGDSLR 229 Query: 712065 GIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQG 712244 I + + G+G + +RA GS ++ + GV+PF K + +QG Sbjct: 230 SINKVSEAIVDYISKRAGIGVNGGAIRAEGSVVRAGEIRHTGVIPFWKHFQTAVKSCSQG 289 Query: 712245 GKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTL 712424 G R GA WHL++E+ L L+ N G + R ++ + I L M+R++ TL Sbjct: 290 GVRGGAATLTYPIWHLEVEKLLVLKNNKGVEENRIRHLDYSVSINRLMMQRLVNNEYITL 349 Query: 712425 FSPS-----------TCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRKML 712571 FSP T P+ ++ E EA + KV + K+I A +L+ Sbjct: 350 FSPDERHGALYGEYHTNPEEFERLYLELEA-----DPKVRK------KRIKATELFSIFG 398 Query: 712572 GMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEIT-----LNTSDSEIAVCNLGSV 712736 TG + F D N +SP ++ + SNLC EI L TS EIA+C L + Sbjct: 399 QERSSTGRIYPIFVDNLNAQSP--YIEAIKQSNLCMEIALPTYPLGTSYEEIALCTLAAY 456 Query: 712737 NLVAHLVKQADGSFALDHDKLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGI 712916 NL A ++ FA R + +R LDN++D Y V A + + R +G+GI Sbjct: 457 NLGA---IESPSEFA-------RLAPIVIRALDNLLDYQDYPVEAAEKAKYR-RALGIGI 505 Query: 712917 MGFQDCLHLLRTPYASEAAVAFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGI 713096 F L Y S A MEA+ YY AS LA+ERG +R + W +G Sbjct: 506 TNFAYFLAKNFVGYDSSAKY-LVHEWMEAMSYYNIQASMMLAKERGANKWHRKTRWAKGQ 564 Query: 713097 LPQDTLKLLAEARGGYVEVDTSESLDWTSLRSRIATHGMRNSNCVAIAPTATISNIIGVS 713276 LP D + V + +LDW +LR+ + +GMRN A P + S I + Sbjct: 565 LPIDWYNKNVDKL-----VKPNYNLDWEALRADVIRYGMRNDTTSAFMPCESSSQISNST 619 Query: 713277 ACIEPTFQNLYVKSNLSGEFTVV 713345 IEP + K + G F V Sbjct: 620 NGIEPPRGLVSTKQSKDGVFNQV 642 >ref|NP_803780.1|ORF214 Length = 189 Score = 206 bits (523), Expect = 1e-50 Identities = 102/186 (54%), Positives = 131/186 (70%), Gaps = 1/186 (0%) Frame = -2 Query: 3022679 MSIKSDKWIRRMAEEHK-MIEPFVPDQVRASEDGRRIVSYGTSSYGYDIRCADEFKIFTN 3022503 M+I SDK I +++ + MI F+ QVR +DG++I+SYG SSYGYD+R A FKIF+N Sbjct: 1 MAILSDKTITDLSKGREPMITDFIGHQVR-EKDGKKIISYGLSSYGYDVRLARNFKIFSN 59 Query: 3022502 INSTIVDPKNFDEGSFVDFKGDVCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCG 3022323 + S ++DP + +G VD+ GD CIIPPNS+ L TVE F IP VL +C GKSTYAR G Sbjct: 60 VTSAVIDPLDPSDGFLVDWTGDYCIIPPNSYILGHTVESFNIPDDVLAICTGKSTYARLG 119 Query: 3022322 IIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLFFESDEVCDVSYADRGGKYQ 3022143 IVNVTP EP ++G V +E +N T LP KIYA+ G+AQ +FF D C+VSYA R GKYQ Sbjct: 120 AIVNVTPIEPGFKGQVVIEIANCTTLPLKIYADMGIAQFMFFRGDAPCEVSYAKRNGKYQ 179 Query: 3022142 GQRGVT 3022125 Q G+T Sbjct: 180 NQIGIT 185 >ref|NP_049845.1|NrdA aerobic NDP reductase, large subunit Length = 754 Score = 201 bits (511), Expect = 3e-49 Identities = 201/778 (25%), Positives = 317/778 (40%), Gaps = 17/778 (2%) Frame = +3 Query: 711372 INVV-DNGVTRPLDLNALRALVVSACDGLGAAVNPDPIVAETVKNLYDGVPMSQVYDSAI 711548 INV+ +GV++ D + ++ A +G +V+P + L DG+ + I Sbjct: 4 INVIKSSGVSQSFDPQKIIKVLSWAAEG--TSVDPYELYENIKSYLRDGMTTDDIQTIVI 61 Query: 711549 LAARTMIE-KDPAYSQVTSRILLHTIRREILGEE-----VVQAEMSTRYAEYFPQFLKRG 711710 AA I ++P Y V +R L+ +R+ + G+ + +Y P+ L + Sbjct: 62 KAAANSISVEEPDYQYVAARCLMFALRKHVYGQYEPRSFIDHISYCVNAGKYDPELLSK- 120 Query: 711711 VDAGXXXXXXXXXXXXXXGEALDANRDLQFGYLGLQTLYDRYFLH--VEGTRIEMPQAFF 711884 + RD++F Y G L ++Y + G E PQ F Sbjct: 121 ---------YSAEEITFLESKIKHERDMEFTYSGAMQLKEKYLVKDKTTGQIYETPQFAF 171 Query: 711885 MRVAMGLSLNE-IDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDL 712061 M + M L +E +DR I FY +S+ TP + T Q SSC + D L Sbjct: 172 MTIGMALHQDEPVDRLKHVIRFYEAVSTRQISLPTPIMAGCRTPTRQFSSCVVIEAGDSL 231 Query: 712062 DGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQ 712241 I +A G+G + +RA GS I + GV+PF K + +Q Sbjct: 232 KSINKASASIVEYISKRAGIGINVGMIRAEGSKIGMGEVRHTGVIPFWKHFQTAVKSCSQ 291 Query: 712242 GGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWT 712421 GG R GA AY WHL++E L L+ N G + R M+ + DL M+R + T Sbjct: 292 GGIRGGAATAYYPIWHLEVENLLVLKNNKGVEENRIRHMDYGVQLNDLMMERFGKNDYIT 351 Query: 712422 LFSPSTC-PDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHP 712598 LFSP +L+ + + + YE I+ K+I A +L+ ++ T Sbjct: 352 LFSPHEMGGELYYSYFKDQDRFRELYEAAEKDPNIRK-KRIKARELFELLMTERSGTARI 410 Query: 712599 WITFKDPCNVRSP-QQHVGVVHSSNLCTEITLNTSDSEIAVCNLGSVNLVAHLVKQADGS 712775 ++ F D N +P + + SNLC EI + T+D +G L A ++ D Sbjct: 411 YVQFIDNTNNYTPFIREKAPIRQSNLCCEIAIPTNDVNSPDAEIGLCTLSAFVLDNFDWQ 470 Query: 712776 FALDHDKLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTP 712955 D DK+ V +R LDN++D Y V +A + K R +G+G+ + L Sbjct: 471 ---DQDKINELAEVQVRALDNLLDYQGYPVPEAEKAK-KRRNLGVGVTNYAAWLASNFAS 526 Query: 712956 YASEAAVAFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQD--TLKLLAE 713129 Y E A E + Y AS +LA+E+G Y + W RG LP D K+ Sbjct: 527 Y--EDANDLTHELFERLQYGLIKASIKLAKEKGPSEYYSDTRWSRGELPIDWYNKKIDQI 584 Query: 713130 ARGGYVEVDTSESLDWTSLRSRIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLY 713309 A YV DW++LR + G+RNS A+ P + S + + EP + Sbjct: 585 AAPKYV-------CDWSALREDLKLFGIRNSTLSALMPCESSSQVSNSTNGYEPPRGPVS 637 Query: 713310 VKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFE 713489 VK + G F V + ++ DL + L++ P Y T Sbjct: 638 VKESKEGSFNQVVPNIEHNI------------DLYDYTWKLAKKGNKP------YLTQVA 679 Query: 713490 VDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKL---DEVYKLAWLRGLKTTYYLRT 713654 + W+ ++AS + Q I+ G + D +Y W G+K YY T Sbjct: 680 IMLKWVCQSASANTYYDPQ-----IFPKGKVPMSIMIDDMLY--GWYYGIKNFYYHNT 730 >ref|NP_037740.1|Gp55 Length = 458 Score = 199 bits (506), Expect = 1e-48 Identities = 143/435 (32%), Positives = 229/435 (52%), Gaps = 13/435 (2%) Frame = -2 Query: 2365229 EAEQSVLGGLLLDN---AAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTRPADVVTVY 2365059 + E SV+GGLL+ A D +A L F +R +E I + + D + V Sbjct: 4 DIEASVIGGLLIGGLTPTASDVLAT-LEPEAFSIPLYRKAFEVIRKQARNRNLIDALMV- 61 Query: 2365058 EALTTSGKADDVGGLAYLNAL--AQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISADA 2364885 A++ G + + L ++N PSAAN++ YA +V D R ++ + DE+ Sbjct: 62 --------AEECGEEHFTSILMTSKNCPSAANLKGYAGMVADNYHRRLVLEIMDEMREPI 113 Query: 2364884 FNPQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPSDVT 2364705 + Q +DE ++ +I + R + +G ++T + +D SD Sbjct: 114 QSGTIDASSQAMDELVKRLSAIRKP--RDEVKPVRLGEIITDYTDTLDRRLRNGEESDTL 171 Query: 2364704 GTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLP-------VAV 2364546 TG +LD +T GM+ +L+I+A RP MGKT ++ I E VA +P V + Sbjct: 172 --KTGIDELDAITGGMNAEDLVIIAARPGMGKTELALKIAEGVASRV-IPGSDVRRGVLI 228 Query: 2364545 FSMEMPGTQLVMRMLGSIGRLDQHRMRT-GRLTDEDWPKLTHAVQKMSEAQLFIDETGGL 2364369 FSMEM Q+ R + + GR+ +R + DE W ++ + + ++++ +++ + L Sbjct: 229 FSMEMSALQIAERSIANAGRMSVSVLRNPASMDDEGWARVANGMSQLADLDVWVVDASRL 288 Query: 2364368 NPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVP 2364189 + E+RS A R ++ L LI+ DYL L+ N I+ IS SLK++AK+L P Sbjct: 289 SVEEIRSIAERHKQENPNLSLIMADYLGLIEKPKADRNDLA-IAHISGSLKAMAKDLKTP 347 Query: 2364188 VIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEIII 2364009 VI+LSQL+R +E+RPNKRP +DLR+SG+IEQDAD I+ +YR+ VY+ +S AEII+ Sbjct: 348 VISLSQLSRDVEKRPNKRPTNADLRDSGSIEQDADSIIMLYREAVYDENSSAAPFAEIIV 407 Query: 2364008 GKQRNGPIGPVRLTF 2363964 K R G +G V F Sbjct: 408 TKNRFGSLGTVYQRF 422 >ref|NP_059611.1|Hypothetical protein Length = 458 Score = 197 bits (501), Expect = 4e-48 Identities = 145/436 (33%), Positives = 227/436 (52%), Gaps = 14/436 (3%) Frame = -2 Query: 2365229 EAEQSVLGGLLLDN---AAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTRPADVVTVY 2365059 + E SV+GGLL+ A D +A L F +R +E I + + D + V Sbjct: 4 DIEASVIGGLLIGGLTPTASDVLAT-LEPEAFSIPLYRKAFEVIRKQARNRNLIDGLMVA 62 Query: 2365058 EALTTSGKADDVGGLAYLNAL---AQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISAD 2364888 E G Y A+ A++ PSAAN++ YA +V D R+++ + DE+ Sbjct: 63 EEC----------GDEYATAVMMTARSCPSAANLKGYAGMVADSYQRRQVLQLLDEMREP 112 Query: 2364887 AFNPQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPSDV 2364708 N + +DE ++ SI + R + +G ++ + +D SD Sbjct: 113 ISNGTLDASGRAMDELVKRLSSIRKP--RNEVKPVRLGEIINDYTDTLDRRLRNGEESDT 170 Query: 2364707 TGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLP-------VA 2364549 TG +LD +T GM+ +L+I+A RP MGKT ++ I E VA +P V Sbjct: 171 L--KTGIEELDAITGGMNAEDLVIIAARPGMGKTELALKIAEGVASRV-IPGSGVRRGVL 227 Query: 2364548 VFSMEMPGTQLVMRMLGSIGRLDQHRMRT-GRLTDEDWPKLTHAVQKMSEAQLFIDETGG 2364372 +FSMEM Q+V R + G + +R R+ DE W ++ ++ ++E +++ + Sbjct: 228 IFSMEMSAIQVVERGIAGAGMMSVSVLRNPSRMDDEGWARVASGMKLLAELDVWVVDASR 287 Query: 2364371 LNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDV 2364192 L+ E+RS + R ++ L LI+ DYL L+ + E I+ IS SLK++AK+L Sbjct: 288 LSVEEIRSISERHKQEHPNLSLIMADYLGLIE-KPKAERNDLAIAHISGSLKAMAKDLKT 346 Query: 2364191 PVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEII 2364012 PVI+LSQL+R +E+RPNKRP +DLR+SG+IEQDAD I+ +YR+ VY+ +S AEII Sbjct: 347 PVISLSQLSRDVEKRPNKRPTNADLRDSGSIEQDADSIIMLYREAVYDENSSAAPFAEII 406 Query: 2364011 IGKQRNGPIGPVRLTF 2363964 + K R G +G V F Sbjct: 407 VTKNRFGSLGTVYQRF 422 >ref|NP_944246.1|putative single-strand DNA binding protein Length = 169 Score = 197 bits (501), Expect = 4e-48 Identities = 96/108 (88%), Positives = 103/108 (95%) Frame = -1 Query: 3396225 MASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGDFKEMTEWHRVAFFG 3396046 MASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGD KE TEWHRV+FFG Sbjct: 1 MASVNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGDIKEATEWHRVSFFG 60 Query: 3396045 RLAEIVSEYLKKGSSVYIEGRIRTRKWQGQDGQDRYSTEIVADQMQML 3395902 RLAEIV E+L+KG+SVYIEGRI+TRKWQ Q GQDRY+TEIVAD+MQML Sbjct: 61 RLAEIVDEHLRKGASVYIEGRIKTRKWQDQSGQDRYTTEIVADRMQML 108 >ref|NP_891805.1|aerobic NDP reductase large subunit Length = 747 Score = 196 bits (497), Expect = 1e-47 Identities = 177/674 (26%), Positives = 293/674 (43%), Gaps = 18/674 (2%) Frame = +3 Query: 711378 VVDNGVTRPLDLNALRALVVSACDGLGAAVNPDPIVAETVKNLYDGVPMSQVYDSAI-LA 711554 V +G+T P + + ++ +A +G V+P + L +G+ + + I +A Sbjct: 6 VKSSGLTVPFEKEKVMKILEAAAEGHN--VDPYELFDMVEPLLTEGMSTNDIQKVLIKVA 63 Query: 711555 ARTMIEKDPAYSQVTSRILLHTIRREILGE-EVVQAEMSTRYAEYFPQFLKRGVDAGXXX 711731 A + + P Y V S + + +R+ + G+ + + F ++R + G Sbjct: 64 ADNITVETPDYQYVASNLAMFALRKSVYGQFQPID----------FYSHIERNIATGKYD 113 Query: 711732 XXXXXXXXXXXGEAL----DANRDLQFGYLGLQTLYDRYFLHVEGTR--IEMPQAFFMRV 711893 E L D D + Y G L ++Y + T+ IE PQ +M + Sbjct: 114 REILQKYSREEVEYLEKFIDHKLDFKMTYAGAMQLKEKYLVQDRSTKKIIETPQFAYMLI 173 Query: 711894 AMGLSLNEID-RETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDGI 712070 M L E + R I+FYN +++ TP + T Q SSC + D L GI Sbjct: 174 GMCLHQEETENRLEHVIDFYNAVANKQISLPTPIMAGVRTPTRQFSSCVVIESDDSLQGI 233 Query: 712071 YEALKENALLSKFA--GGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQG 712244 E NA++ + G+G + +RA GS I + GV+PF K + +QG Sbjct: 234 NETA--NAIIKYISKRAGIGINAGMIRAEGSKIGHGEVRHTGVIPFWKHFQTAVKSCSQG 291 Query: 712245 GKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTL 712424 G R GA Y WHL+ E + L+ N G + R ++ I +L ++R ++ TL Sbjct: 292 GIRGGAATLYYPMWHLEFESLIVLKNNKGVEDNRIRHLDYGVQINNLMVERFLKRDYITL 351 Query: 712425 FSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWI 712604 FSP L E + +K+ + ++ A L+ + F TG + Sbjct: 352 FSPDVAGGLLWDLYFRDEEGFRQLYEKLEKDPSVRKTRVKAEDLFLAVAIERFNTGRIYP 411 Query: 712605 TFKDPCNVRSP-QQHVGVVHSSNLCTEITLNT-----SDSEIAVCNLGSVNLVAHLVKQA 712766 TF D N ++V + SNLC EI L T DSEI++C L + L Sbjct: 412 TFTDNMNNHGAFIRNVAPIKQSNLCCEIALPTKPMGRDDSEISLCTLAAYVL-------- 463 Query: 712767 DGSFALDH-DKLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHL 712943 G+F +++ ++++R V +R LDN++D Y V +A + K R +G+G+ F +L Sbjct: 464 -GNFDIENMEEVERIAMVMVRALDNLLDYQDYPVEQALTAK-KRRSLGVGVTNFAS--YL 519 Query: 712944 LRTPYASEAAVAFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQDTLKLL 713123 + E A F ++ E + Y AS +LA+E+G + + RG LP D K Sbjct: 520 ADNFFTYEDANEFTHKTFERLQYALIKASVQLAKEKGACELMHETRYGRGELPIDWYKKT 579 Query: 713124 AEARGGYVEVDTSESLDWTSLRSRIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQN 713303 + VD +DW LR + +G+RNS A+ P + S + + IEP Sbjct: 580 VDEL-----VDPVYEMDWEELRKDLKKYGIRNSTLSALMPCESSSQVSNSTNGIEPPRGI 634 Query: 713304 LYVKSNLSGEFTVV 713345 + VK + G+F V Sbjct: 635 VSVKGSKEGQFNQV 648 >ref|NP_861929.1|NrdA aerobic NDP reductase, large subunit Length = 751 Score = 194 bits (494), Expect = 3e-47 Identities = 177/666 (26%), Positives = 277/666 (41%), Gaps = 13/666 (1%) Frame = +3 Query: 711387 NGVTRPLDLNALRALVVSACDGLGAAVNPDPIVAETVKNLYDGVPMSQVYDSAI-LAART 711563 +GV++ D + ++ C+G ++P + E +L DG+ + I +AA + Sbjct: 7 SGVSQNFDAQKIIQVLTWQCEG--TQIDPYELYEEIKTHLVDGMSTKDIQKICIKVAANS 64 Query: 711564 MIEKDPAYSQVTSRILLHTIRREILGEEVVQAEMS-----TRYAEYFPQFLKRGVDAGXX 711728 + ++P Y V ++ L+ +R+++ G+ A + +Y P+ L R Sbjct: 65 ISVEEPDYQYVAAKGLMFALRKDVYGQFEPPAFIDHISYCVNEGKYDPELLSR------- 117 Query: 711729 XXXXXXXXXXXXGEALDANRDLQFGYLGLQTLYDRYFLH--VEGTRIEMPQAFFMRVAMG 711902 + RD Y G L ++Y + G E PQ M + M Sbjct: 118 ---YSAEEIIYLDSRIKHERDFDLTYAGAMQLKEKYLVKDKTTGKIYETPQFAIMAIGMA 174 Query: 711903 LSLNEI-DRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDGIYEA 712079 L +E DR I FY+ +S+ TP + + T Q SSC + D L I + Sbjct: 175 LHQDETHDRLKHIIRFYDAVSTHQVSLPTPIMAGARTPTRQFSSCVVIEAGDSLKSINKT 234 Query: 712080 LKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKG 712259 G+G + +RA GS I + GV+PF K + +QGG R G Sbjct: 235 SASIIEYISKRAGIGINVGMLRAEGSKIGMGEVRHTGVIPFWKHFQTAVKSCSQGGIRGG 294 Query: 712260 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSP-S 712436 A AY WHL++E L L+ N G D R M+ I DL M+R+ + TLFSP Sbjct: 295 AATAYYPMWHLEVENLLVLKNNKGVDENRIRHMDYGIQINDLMMERLGKNDYITLFSPHE 354 Query: 712437 TCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKD 712616 +L+ F + + YE K + K+I A +L+ + T + F D Sbjct: 355 MSGELYYSFFEDQDKFRELYE-KAEKDPTIRKKRIKALELFELFMTERSGTARIYPQFVD 413 Query: 712617 PCNVRSP-QQHVGVVHSSNLCTEITLNTSDSEIAVCNLGSVNLVAHLVKQADGSFALDHD 712793 N +P + + SNLC EI + T+D +G L A ++ + D D D Sbjct: 414 NTNNYTPFIREKAPIRQSNLCCEIAIPTNDVNGPDAEIGLCTLSAFVLDKFDWQ---DQD 470 Query: 712794 KLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAA 712973 K+ V +R LDN++D Y V +A + K R +G+G+ + L Y E A Sbjct: 471 KINELAEVQVRALDNLLDYQDYPVPEALKAK-KRRNLGVGVTNYAAWLASNFASY--EDA 527 Query: 712974 VAFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQD--TLKLLAEARGGYV 713147 E + Y AS +LA+E+G Y + W RG LP D K+ A YV Sbjct: 528 NYLTHELFERLQYGLIKASIKLAKEKGPCEYYSDTKWSRGELPIDWYNKKIDQIAAPNYV 587 Query: 713148 EVDTSESLDWTSLRSRIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLS 713327 DW + HG+RNS A+ P + S + + IEP + +K + Sbjct: 588 -------CDWKNFELNSKEHGIRNSTLSALMPCESSSQVSNSTNGIEPPRGPVSIKESKE 640 Query: 713328 GEFTVV 713345 G F V Sbjct: 641 GNFRQV 646 >ref|NP_543071.1|putative helicase Length = 463 Score = 193 bits (491), Expect = 6e-47 Identities = 124/341 (36%), Positives = 194/341 (56%), Gaps = 4/341 (1%) Frame = -2 Query: 2364974 ANIRRYAEIVRDRAVLR---RLVSVADEISADAFNPQGKEVRQLLDEAESKVFSIAEDGA 2364804 +++ Y +R A LR ++++ A + DA + E L +A++ + S++ + Sbjct: 89 SSLEHYVAALRRNAALRDAEKILNKALQKLRDAHTCEAAE--DALKDAQNMMASLSTE-- 144 Query: 2364803 RGNQGFLEIGPLLTQVVERIDTLYHTANPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGR 2364624 +G + I +L +VVERI+ S TG +LD T GM G+L+ +A R Sbjct: 145 KGIIQPVHIDDVLPEVVERIECRNQGLEKSRTL--MTGIDELDAKTGGMEPGDLVFIAAR 202 Query: 2364623 PSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRT-GRLTD 2364447 PSMGKT +++I + V E G V +F+MEM Q+ RM+ + G + R+++ D Sbjct: 203 PSMGKTELALDIIDKVT-EQGHGVLLFTMEMANIQIGERMVSAAGGMPVSRLKSVAHFED 261 Query: 2364446 EDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSS 2364267 EDW + + V +M+ +++ + L E+ + + + + L++VDYL L+ + Sbjct: 262 EDWARFSQGVGRMTGRNIWMVDQANLTIDEICATTKHHMIKHPETALVVVDYLGLIKTRT 321 Query: 2364266 QGENRATEISEISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDA 2364087 G + + EIS+ LK LAK P+IALSQL+RG+E RPNKRP+ SDL+ SG IE DA Sbjct: 322 TGRHDLA-VGEISKGLKGLAKSGGFPLIALSQLSRGVESRPNKRPMNSDLKNSGEIEADA 380 Query: 2364086 DVILFIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGPVRLTF 2363964 D+IL +YRDEVYNPD+ +G AEI I KQRNG +G + F Sbjct: 381 DIILMLYRDEVYNPDTQARGIAEINITKQRNGSLGTIYRRF 421 >ref|YP_006384.1|gp12 Length = 458 Score = 193 bits (490), Expect = 8e-47 Identities = 142/436 (32%), Positives = 227/436 (52%), Gaps = 14/436 (3%) Frame = -2 Query: 2365229 EAEQSVLGGLLLDN---AAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTRPADVVTVY 2365059 + E SV+GGLL+ A D +A L F +R +E I + + D + V Sbjct: 4 DIEASVIGGLLIGGLTPTASDVLAT-LEPEAFSIPLYRKAFEVIRKQARNRNLIDGLMVA 62 Query: 2365058 EALTTSGKADDVGGLAYLNAL---AQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISAD 2364888 E G Y A+ A++ PSAAN++ YA +V D R+++ + DE+ Sbjct: 63 EEC----------GDEYATAVMMTARSCPSAANLKGYAGMVVDSYQRRQVLQLLDEMREP 112 Query: 2364887 AFNPQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPSDV 2364708 N + +D+ ++ +I + R + +G ++ + +D SD Sbjct: 113 ISNGTLDASGRAMDDLVKRLSAIRKP--RNEVKPVRLGEIINDYTDTLDRRLRNGEESDT 170 Query: 2364707 TGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLP-------VA 2364549 TG +LD +T GM+ +L+I+A RP MGKT ++ I E VA +P V Sbjct: 171 L--KTGIEELDAITGGMNAEDLVIIAARPGMGKTELALKIAEGVASRV-IPGSGVRRGVL 227 Query: 2364548 VFSMEMPGTQLVMRMLGSIGRLDQHRMRT-GRLTDEDWPKLTHAVQKMSEAQLFIDETGG 2364372 +FSMEM Q+V R + G + +R R+ DE W ++ ++ +++ +++ + Sbjct: 228 IFSMEMSAIQVVERGIAGAGMMSVSVLRNPSRMDDEGWARVASGMKLLADLDVWVVDASR 287 Query: 2364371 LNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDV 2364192 L+ E+RS + R ++ L LI+ DYL L+ + E I+ IS SLK++AK+L Sbjct: 288 LSVEEIRSISERHKQEHPNLSLIMADYLGLIE-KPKAERNDLAIAHISGSLKAMAKDLKT 346 Query: 2364191 PVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEII 2364012 PVI+LSQL+R +E+RPNKRP +DLR+SG+IEQDAD I+ +YR+ VY+ +S AEII Sbjct: 347 PVISLSQLSRDVEKRPNKRPTNADLRDSGSIEQDADSIIMLYREAVYDENSSAAPFAEII 406 Query: 2364011 IGKQRNGPIGPVRLTF 2363964 + K R G +G V F Sbjct: 407 VTKNRFGSLGTVYQRF 422 >ref|NP_818618.1|gp80 Length = 1111 Score = 184 bits (467), Expect = 4e-44 Identities = 169/670 (25%), Positives = 291/670 (43%), Gaps = 52/670 (7%) Frame = -2 Query: 2903228 DDMAAL---FADLPSAIANTVEVAKRCNXXXXXXXXXXXXXPTPDGMSLDDYLVQLSKEG 2903058 DD+ A AD AI T +A+RC G++ L + +G Sbjct: 262 DDLVATGLDSADAWKAIQYTSILAERCTVELPKAKPLRFVCDK--GLTAKQQLSREIAKG 319 Query: 2903057 LETRLAQLYPAEAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPVG 2902878 + R+AQ P A R A+ Y KRL++E IT F YFL+++D + AK+ + VG Sbjct: 320 WKYRVAQR-PDMARRKAE---YVKRLQYEFKIITDKDFGDYFLVISDLVRRAKDKSIDVG 375 Query: 2902877 PGRGSGAGSLVAYALGITDLDPLR---YNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQ 2902707 P RGS A SL++Y L IT++DPL ++FERF++P R PD D+DF R + Sbjct: 376 PARGSAAASLISYLLRITEIDPLHPLFNKMVFERFIDPFRSDYPDIDLDFDDEKRWEIEL 435 Query: 2902706 YVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAK----LIPFKPGKHVT 2902539 K YG + V+ +A K ++D+ R L IAK + ++ + Sbjct: 436 DAKNLYGPENVASVANNTGYHGKNTLKDVARAYKLPLETFKAIAKRTTVRVETDDKRNDS 495 Query: 2902538 IADAMKE---EPQLQERYD-HEDEVHQLLDL-AQRVEGLTRNVGMHAGGVLIAPGKLTDF 2902374 I+D ++ P++ + H D++ + L + +G + +HA G +IA + D Sbjct: 496 ISDVLESYATHPEIAGLIEAHADKLAMAVALESGNGDGNLHSSSVHACGFVIASDPIPDV 555 Query: 2902373 CPLYTQGDDGG------VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIR------ 2902230 C +Y + G V YDK D E++G++K DFLG T+ + ++ R Sbjct: 556 CAIYLKDKGSGSKKTKVQVIPYDKRDAESLGMLKVDFLGSATMGAIGLMRKWSRVELEEL 615 Query: 2902229 --RLDPSKADWALAQVPLDDPASFQILKKAN-------------TVAVFQLESRGMQGML 2902095 + W Q + + ++ AN V + Q E + + Sbjct: 616 YLSIYKDYDRWIRVQKRIKESGGKRVGFTANRFDNILKRFRNDDVVGIMQFEGGTTRQVC 675 Query: 2902094 KDAQPDRFEDIIALVSLYRPGPM--DLIPSFCARKHGREKVEYPDPR-VEPVLKETYGIM 2901924 ++ QP F+++ A +L RPGP + A K+G + P+ + + T+G + Sbjct: 676 RNVQPVDFDELAACTALSRPGPYYGGQYTDYVAVKNGEKDWARIHPKGFDRHVAFTFGQI 735 Query: 2901923 VYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPE-EMAKHREIFAEGAA-TNGLTREKSD 2901750 VYQEQ+M + + + G+ +R+ +GKK E + ++ F +G A T G+ + + Sbjct: 736 VYQEQIMWILRDLAGFDNAEVLRVRKIIGKKLGEFQFEAIKQAFIDGCAQTCGVDPDTAL 795 Query: 2901749 EIFDLMEKFAGYGFNKSHXXXXXXXXXXXXXXXAHHPAEFMAANMTLAMDDTDKV---KI 2901579 +F + AGY FN +H H EF A+ + D ++ Sbjct: 796 RVFGAIRTAAGYAFNIAHAYSYALIAYWQMGFKMDHTTEFFASTLYKNGDGKKEIPRRTA 855 Query: 2901578 LFDDCVVNNLAVLPPDINQSHYRFEPVAE--ADGKRSRTIRYGLGAVKGSGQNAIEEILR 2901405 + D + + + D+N S + P + A + T+ G + G + + IL Sbjct: 856 VLQDAEAHRIGIGGWDLNLSGANWRPYYDHSAHSRNLGTVMPGFQQIPGIAEATAKAILD 915 Query: 2901404 AREEKAFTDL 2901375 R+ + D+ Sbjct: 916 WRDNLPWQDI 925 Score = 141 bits (356), Expect = 3e-31 Identities = 151/608 (24%), Positives = 259/608 (42%), Gaps = 57/608 (9%) Frame = -2 Query: 3452372 IEETCTILDTCDFKLDT---LRYEYPDEIVPKGLTPTSYLEQETMAGAATRYPQGVP--- 3452211 I+ T + + C +L LR+ + KGLT L +E G R Q Sbjct: 278 IQYTSILAERCTVELPKAKPLRF-----VCDKGLTAKQQLSREIAKGWKYRVAQRPDMAR 332 Query: 3452210 --EKVSKQIRYELDLIAQLSYEPFFLTVYDIVKYARSQNI-LCQGRGSAANSVVCFCLGI 3452040 + K+++YE +I + +FL + D+V+ A+ ++I + RGSAA S++ + L I Sbjct: 333 RKAEYVKRLQYEFKIITDKDFGDYFLVISDLVRRAKDKSIDVGPARGSAAASLISYLLRI 392 Query: 3452039 TEVNPEQ---STMLFERFISAERGEPPDIDVDFEHQRREEVIQHIYEKYGHNRAALAAAV 3451869 TE++P + M+FERFI R + PDID+DF+ ++R E+ YG A A Sbjct: 393 TEIDPLHPLFNKMVFERFIDPFRSDYPDIDLDFDDEKRWEIELDAKNLYGPENVASVANN 452 Query: 3451868 STYRPRGVLRETGKAL--------GVDPMLVDRVAKAHRWFDGSRDLLQQFST----IGL 3451725 + Y + L++ +A + RV + D D+L+ ++T GL Sbjct: 453 TGYHGKNTLKDVARAYKLPLETFKAIAKRTTVRVETDDKRNDSISDVLESYATHPEIAGL 512 Query: 3451724 -DPETPLIXXXXXXXXXXLNFPRHLSQ-HSGGFVISRGKLTRLVPV------ENAAMDGR 3451569 + + + H S H+ GFVI+ + + + + Sbjct: 513 IEAHADKLAMAVALESGNGDGNLHSSSVHACGFVIASDPIPDVCAIYLKDKGSGSKKTKV 572 Query: 3451568 RVIQWDKDDLEALGLMKVDVL------ALGMLSALHRAFDMRTAWRGPPEPDGEPFTLKH 3451407 +VI +DK D E+LG++KVD L A+G++ R + D K Sbjct: 573 QVIPYDKRDAESLGMLKVDFLGSATMGAIGLMRKWSRVELEELYLSIYKDYDRWIRVQKR 632 Query: 3451406 IPQD-------DKATYDMICRA----DTVGVFQIESRAQMSMLPRLRPQTYYDLVIEVAI 3451260 I + +D I + D VG+ Q E + ++P + +L A+ Sbjct: 633 IKESGGKRVGFTANRFDNILKRFRNDDVVGIMQFEGGTTRQVCRNVQPVDFDELAACTAL 692 Query: 3451259 VRPGPIQGGAVHPYLKRRQGIEKVS--YPKEELKPALERTYGVPIFQEQVMQIAMIAAGF 3451086 RPGP GG Y+ + G + + +PK + T+G ++QEQ+M I AGF Sbjct: 693 SRPGPYYGGQYTDYVAVKNGEKDWARIHPK-GFDRHVAFTFGQIVYQEQIMWILRDLAGF 751 Query: 3451085 TPGEADQLRRAMAAWKRKGNLEQYHRKIVDGMRER-DYPPDFAEQIFEQIKGFGDYGFPE 3450909 E ++R+ + + E + +DG + PD A ++F I+ Y F Sbjct: 752 DNAEVLRVRKIIGKKLGEFQFEAIKQAFIDGCAQTCGVDPDTALRVFGAIRTAAGYAFNI 811 Query: 3450908 SHAASFAKLAYASSWLKCHEPAIFLAALLNSQPMG---FYPPSQLVQDAKRH--GVQVLP 3450744 +HA S+A +AY K F A+ L G + ++QDA+ H G+ Sbjct: 812 AHAYSYALIAYWQMGFKMDHTTEFFASTLYKNGDGKKEIPRRTAVLQDAEAHRIGIGGWD 871 Query: 3450743 IDVTQSNW 3450720 ++++ +NW Sbjct: 872 LNLSGANW 879 Score = 47.4 bits (111), Expect = 0.007 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 4/134 (2%) Frame = -2 Query: 2903948 RFVHLRVHSEFSIADGIVRIDDIVKXXXXXXXXXXXXXXXGNAFGLVRFYQEARGKGIKP 2903769 +FV H+ FS AD + GN +F +E + +GIKP Sbjct: 2 KFVSFHTHNTFSYADALGMPSIHAARAEELGMWALGTSNHGNVNDHAQFERECKERGIKP 61 Query: 2903768 IAGCDVWIANPDDRDKPSR---LLLLVKDKVGYLNLCELLSKAWLTNQYRGRAELDASWL 2903598 I GC+++ + + DK R L + +++GY NL +++++++ + Y+ SW Sbjct: 62 IFGCEIYFSPVGEEDKTRRKTHLTIFAMNEIGYRNLNRIITQSYV-DAYQWPT---VSWE 117 Query: 2903597 DGELS-QGLLALSG 2903559 + E + +G+L LSG Sbjct: 118 NLEANHEGILVLSG 131 >ref|YP_006476.1|Res Length = 970 Score = 184 bits (467), Expect = 4e-44 Identities = 201/760 (26%), Positives = 308/760 (40%), Gaps = 27/760 (3%) Frame = -1 Query: 190950 FEADLDYQREAIDAVCDLFRGQESYRGDFSVLXXXXXXXXXXAQGSLGFAVSEQGVGNRL 190771 FE +L +Q+ +DAV ++F S++ D S+ V+ + L Sbjct: 7 FEKNLPHQKAGVDAVMNVFVSATSHQED---------------NVSIRLLVNPE-----L 46 Query: 190770 SLTDDALARNLADVQXXXXXXXXXXXXXRD---FTVEMETGTGKTYVYLRTIFELNRRYG 190600 LT+ +N+ VQ V METGTGKTY Y +TIF+LN+ +G Sbjct: 47 RLTEQQYYKNIKKVQELNGIEHVKNNYDARSNVIDVSMETGTGKTYTYTKTIFDLNKSFG 106 Query: 190599 FTKFVIVVPSIAIKEGVHKTLA--ITEDHFRALYAGVPYDYFLYDSAKLG--------QV 190450 KF+I+VP+++IK G L ++HFR Y Y + G Q Sbjct: 107 INKFIIIVPTLSIKAGTVNFLKSDALKEHFRDDYEREIKTYVVESQKNAGKSTKSYMPQA 166 Query: 190449 RHFAASAA------IQIMVMTVAAINKKEINNLYKDSEKTGG-EKPIDLIRATRPIVIVD 190291 H A+ I ++V+ I+ K +N+ Y + P + A +P +I+D Sbjct: 167 IHDFVEASNFNKKYIHVLVINTGMIHSKNLNSTYDVGLLDNHFDSPFSALGAVKPFIIID 226 Query: 190290 EPQSVDGGLEGRGREALAAMAPLCTLRYSATHVDRH-HMVYRLDAVDAYERKLVKQIEIA 190114 EP G + E + +RY AT + + ++VYRL AVDA+ LVK I+ Sbjct: 227 EPHKFPTGK--KTWENIEKFNAQYIIRYGATFSEGYKNLVYRLTAVDAFNEDLVKGID-- 282 Query: 190113 SAIVEDAHNKPYVRLVGVSNRRGAISARVELDVATTAGVKRQIVTATDGDDLERLTKRAL 189934 A +ED G +N + S E+ K+ + T G+ L + Sbjct: 283 -AYIEDIVGD------GDANLKFIKSDGEEVTFELNENNKKTLFKLTKGESLSKTHSAIH 335 Query: 189933 YAGLRIGEVHAVKGAEYVELRHPEGEAFLSLGEAFGDIDTLAVQREMIRRTIREH--LDK 189760 L + V + +EL+ S + D M+R+ I+EH L+K Sbjct: 336 DLTLDALGKNTVVLSNGIELKIGCSINPYSYDQTLAD--------SMMRKAIKEHFKLEK 387 Query: 189759 ELRLAERGVKVLSLFFVDSVERYRQYDENGMPVKGDYALIFXXXXXXXXXXXXXXALFDG 189580 E +K L+LFF+D +E YR + +K + + Sbjct: 388 EFLTQRPRIKPLTLFFIDDIEGYRDGNNIAGSLKAKFEEYVLAEANELLKIEKDEFYSNY 447 Query: 189579 VDVAL-EVGRAHNGYFSIDRKGGWTDTXXXXXXXXXXXXXAYGLIMREKEALLSFDTPLK 189403 ++ + ++ H GYFS D I+ +KE LLS D P + Sbjct: 448 LEKTVKDISSVHGGYFSKDNSD-----------KDDKIEKEINEILHDKELLLSLDNPRR 496 Query: 189402 FIFSHSALKEGWDNPNVFQICTLRDIQTERERRQTLGRGLRLAVDQDGERVRDAGVNTLT 189223 FIFS L+EGWDNPNVFQIC LR + + Q +GRGLRL V++ RV+D TL Sbjct: 497 FIFSKWTLREGWDNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNEYMCRVKDRNF-TLK 555 Query: 189222 VIATERYESFAENLQKEIEADTGIRFGIVEEHQFAALPVQEGDGPAHALGVEL-SRVLWN 189046 + F ++L KE+ + + + + QE A EL SR L N Sbjct: 556 YYVDFTEKDFVDSLVKEVNESS-------FKERVPSKFTQELKEQIRAQYPELSSRALMN 608 Query: 189045 HLHEQGYVDAQGKVLDRLKDALRQSALVLPEAFEMLRAPIVATLRKLSGRFAVRNADERR 188866 L +D D DA + P AF PI K+ + D +R Sbjct: 609 ELFNDEIIDDNDNFKD--SDAYSRLKSKYPAAF-----PIGVKPGKIK-----KATDGKR 656 Query: 188865 AIALRRDASGKAVVFGEEFRALWDRIRHRTV--YRVEFDN 188752 +R GK E + LW+ I + V Y++ +N Sbjct: 657 RTKMR---VGKF----SELKELWELINQKAVIEYKINSEN 689 >ref|NP_049848.1|dTMP (thymidylate) synthase Length = 286 Score = 173 bits (439), Expect = 7e-41 Identities = 114/331 (34%), Positives = 162/331 (48%), Gaps = 8/331 (2%) Frame = +2 Query: 1279130 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 1279309 MKQY DL++ I + G ++RTG TI++ G+ LR+DL +GFPAVTTKKLA+K+ I EL+ Sbjct: 1 MKQYQDLIKDIFENGYETDDRTGTGTIALFGSKLRWDLTKGFPAVTTKKLAWKACIAELI 60 Query: 1279310 GFLRASRSAADFRAL-------GCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQW 1279468 FL S + D R + G VWD N A+ L Y G +LG +YG QWR + Sbjct: 61 WFLSGSTNVNDLRLIQHDSLIQGKTVWDENYENQAKDLG--YHSG--ELGPIYGKQWRDF 116 Query: 1279469 PGYKVLDAGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRR 1279648 G +DQ+ + +D I + P DRR Sbjct: 117 GG---------------------------------------VDQIIEVIDRIKKLPNDRR 137 Query: 1279649 ILFHAWNPAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALL 1279828 + AWNPA L +ALP CH+ YQF N + L Y RS DV LG PFN+ A L+ Sbjct: 138 QIVSAWNPAELKYMALPPCHMFYQF--NVRNGYLDLQWYQRSVDVFLGLPFNIASYATLV 195 Query: 1279829 ELVGRLTGYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYAKTGVY 1280008 +V ++ P + G+ HIY N ++ + L REP + L I+ ++ Sbjct: 196 HIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPKELCELVISGLPYKFRYLSTK 255 Query: 1280009 AP-EWLEQIEPSDFSLVGYRHHEPLTAPMAV 1280098 +++ ++ P DF L Y H P+ MAV Sbjct: 256 EQLKYVLKLRPKDFVLNNYVSHPPIKGKMAV 286 >ref|NP_861931.1|dTMP (thymidylate) synthase Length = 286 Score = 170 bits (431), Expect = 6e-40 Identities = 119/336 (35%), Positives = 160/336 (47%), Gaps = 13/336 (3%) Frame = +2 Query: 1279130 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 1279309 MKQY L+ IL+ G ++RTG TI++ G LR+DL +GFPAVTTKKLA+K+ I EL+ Sbjct: 1 MKQYQYLINDILENGYETDDRTGTGTIALFGTKLRWDLTKGFPAVTTKKLAWKACIAELL 60 Query: 1279310 GFLRASRSAADFRAL-------GCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQW 1279468 F+ S + D R G +WD N A+ L Y G +LG +YG QWR + Sbjct: 61 WFMSGSTNVNDLRIRTHGSLIEGKTIWDDNYENQAKDLG--YHSG--ELGPIYGKQWRDF 116 Query: 1279469 PGYKVLDAGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRR 1279648 G +DQL + +D I P DRR Sbjct: 117 GG---------------------------------------VDQLVKTIDRIKALPNDRR 137 Query: 1279649 ILFHAWNPAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALL 1279828 + AWNPA +DQ+ALP CH+ YQF N + L Y RS DV LG PFN+ AAL Sbjct: 138 QIVSAWNPAEIDQMALPPCHMFYQF--NVRNGHLDLQWYQRSVDVFLGLPFNIASYAALT 195 Query: 1279829 ELVGRLTGYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEI-----AERVPEYA 1279993 +V ++ P + G+ HIY N ++ + L REP + LEI E P Sbjct: 196 HIVAKMCNLIPGDLVFSGGNTHIYSNHVEQCKEVLRREPKELCSLEINWPSNFENWPTKI 255 Query: 1279994 KTGVYAPEWLE-QIEPSDFSLVGYRHHEPLTAPMAV 1280098 + +W+ + SDF L Y H + A MAV Sbjct: 256 QM-----DWVTGTMTHSDFVLKNYESHPTIKAKMAV 286 >ref|NP_944201.1|dTMP synthase Length = 277 Score = 168 bits (425), Expect = 3e-39 Identities = 110/330 (33%), Positives = 155/330 (46%), Gaps = 7/330 (2%) Frame = +2 Query: 1279130 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 1279309 MK YLD++ + G + +RTG+ T S+ G + R D+ GFPAVTTK LA+K+ GE + Sbjct: 1 MKAYLDIINYTFENGEDEMDRTGVGTRSVLGQVFRHDMADGFPAVTTKTLAWKAVRGECL 60 Query: 1279310 GFLRASRSAADFRAL-------GCKVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQW 1279468 F+ + RA+ +WD N N Q +A Y G +LG VYG QWR + Sbjct: 61 WFMNGFTNVEVLRAMTYGVGSSSKTIWDDNFNH--QGVALGYTDG--ELGPVYGKQWRDF 116 Query: 1279469 PGYKVLDAGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRR 1279648 G +DQL + ++ I NP RR Sbjct: 117 NG---------------------------------------VDQLAKAIERIKTNPECRR 137 Query: 1279649 ILFHAWNPAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALL 1279828 + AWNP LD++ALP CH+L++F + + ++L Y RS D LG PFN+ LL Sbjct: 138 NIVCAWNPVDLDKMALPPCHVLFRF--SVKRGRLNLTWYQRSVDTFLGLPFNIASYGLLL 195 Query: 1279829 ELVGRLTGYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYAKTGVY 1280008 E+V ++TGY T + D HIY N + +Q QL REP+ P L+ R Sbjct: 196 EIVAQITGYKAGILTGMLDDTHIYHNHFEQVQEQLQREPHKLPTLKFKNRFTTL------ 249 Query: 1280009 APEWLEQIEPSDFSLVGYRHHEPLTAPMAV 1280098 E + D L Y+ H + APMAV Sbjct: 250 --EEACNLSVDDIELEDYKCHSAIKAPMAV 277 >ref|NP_040655.1|unknown protein Length = 430 Score = 167 bits (424), Expect = 4e-39 Identities = 118/378 (31%), Positives = 193/378 (51%), Gaps = 5/378 (1%) Frame = +3 Query: 497631 NIVVGEQVRGTVTLRLNNVRWRDAFDTLLDTHGLAMSRRGSVIWVTPXXXXXXXXXXXXX 497810 ++V+G ++G V+L ++V AFD LL+++ L S G V+ +T Sbjct: 47 SVVLGPSIQGVVSLDFDDVPCSQAFDLLLESNHLLSSMVGDVLVITAMDQVLNSERKADD 106 Query: 497811 MHARAADL---EPLASRTFALHYPRAQDVQRLLAGATGQRLLSKRGAAAADPRTNLLFVT 497981 + DL + R + + A +V L + L + + D RTN +F Sbjct: 107 LRTFRRDLFNANDIERRVINIVHASASEVVSLFKESF-MSLDAPGMSMTVDERTNSVFAA 165 Query: 497982 DLAPRLDQVASLIEAIDRPSRQVRIEARIVEGEQGFSRNLGARVALRAQGRPPSGESATF 498161 + + S+I+AID P RQV IEA +VE +S+ LG L G G + Sbjct: 166 LPSSFFPALESVIQAIDVPVRQVAIEANVVEASVDWSKRLG----LNWGGALSLGNWSAV 221 Query: 498162 TTGARNALDLAARPLGGFEAATAGFTLFAAPLSRVLDVELSALEAQGRGQIVSSPRVVTA 498341 T G L +AA ++ GF + LS LD +A+E +G G++VS P ++T Sbjct: 222 TAGD---LSVAA-------GSSIGFGFLSNTLS--LDGLFTAMENEGNGRVVSRPTLLTL 269 Query: 498342 DRVKAIVEQGSEVPYQAKVGNGVSGVQFRRATLKLEVEPQITPDGRVVLDLDVTKDSIGE 498521 DR A V +G+E+PYQ G+G + V F+ A L LEV+P I+PD +V+++ V++DS Sbjct: 270 DRQSASVLRGTELPYQQSAGDGATSVAFKHAALSLEVKPVISPDNSIVIEVLVSRDSPNF 329 Query: 498522 PTAAG--PAIHTKHVQTRVEVENGGTVAIGGIYEQLNRNDVTRVPLLGKIPFLGALFRHR 498695 A P I T + T + V +G TV +GG+Y +N+ +RV + +IP +G LF+ + Sbjct: 330 SNAIDGVPPIDTNRLVTTIRVPHGQTVVLGGVYSTINQQGSSRVSGISRIPGIGRLFKKK 389 Query: 498696 AQRDQRNELVVFITPTVV 498749 ++ EL++F+TP ++ Sbjct: 390 EHVTEQYELLIFLTPRIL 407 Score = 82.4 bits (202), Expect = 2e-13 Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 2/302 (0%) Frame = -3 Query: 222097 GGMIQADAATNSLIITASDPVYRNLRSVIDQLDARRAQVYIEALIVELASNTQGNLGIQW 221918 G + D TNS+ + L SVI +D QV IEA +VE + + LG+ W Sbjct: 150 GMSMTVDERTNSVFAALPSSFFPALESVIQAIDVPVRQVAIEANVVEASVDWSKRLGLNW 209 Query: 221917 --QVASGQFLGGTNLNPTAGLGNSIIXXXXXXXXXXXXXXXXXXXXXXXGSLTQGLNIGW 221744 ++ G + T + + G+SI G+ Sbjct: 210 GGALSLGNWSAVTAGDLSVAAGSSI-------------------------------GFGF 238 Query: 221743 LHNMFGVQGLGALLQYFAGVSDANVLSTPNLVTLDNEEAKIVVGQNVPIATGSYSNLTSG 221564 L N + GL ++ + V+S P L+TLD + A ++ G +P + G Sbjct: 239 LSNTLSLDGLFTAME---NEGNGRVVSRPTLLTLDRQSASVLRGTELPYQQSA----GDG 291 Query: 221563 NTNNAFNTYDRRDVGLTLHVKPQITEGGILKLQLYTEDSAVVAGTTSAQTGPTFTKRSIQ 221384 T+ AF + L+L VKP I+ + +++ + P T R + Sbjct: 292 ATSVAF-----KHAALSLEVKPVISPDNSIVIEVLVSRDSPNFSNAIDGVPPIDTNRLV- 345 Query: 221383 STILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSESKIRAKTNLMVFLRPV 221204 +TI +G+ +VLGG+ Q +S+V + IP IG+LF+ + + + L++FL P Sbjct: 346 TTIRVPHGQTVVLGGVYSTINQQGSSRVSGISRIPGIGRLFKKKEHVTEQYELLIFLTPR 405 Query: 221203 II 221198 I+ Sbjct: 406 IL 407 Score = 81.3 bits (199), Expect = 4e-13 Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 1/240 (0%) Frame = +2 Query: 1798328 VQVDVRVVEFSRSVLKQAGLNFFKQSNGFSFGAFAPTGLTSITGSPGGALTYNTNVPISS 1798507 V ++ VVE S K+ GLN+ S G ++ ++ + G ++ Sbjct: 188 VAIEANVVEASVDWSKRLGLNW---GGALSLGNWSAVTAGDLSVAAGSSI---------- 234 Query: 1798508 AFNLVVNSVS-HGLFADLSILEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLG 1798684 F + N++S GLF + +E RV+++PTL+ L QSA+ L G E+P G Sbjct: 235 GFGFLSNTLSLDGLF---TAMENEGNGRVVSRPTLLTLDRQSASVLRGTELPYQQSAGDG 291 Query: 1798685 TISIEWKPYGVGLTVTPTVLNPRRIALKVAPESSQLDFVHSITINGVQVPALTTRRADTT 1798864 S+ +K + L V P + I ++V +F ++I VP + T R TT Sbjct: 292 ATSVAFKHAALSLEVKPVISPDNSIVIEVLVSRDSPNFSNAID----GVPPIDTNRLVTT 347 Query: 1798865 VELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQSDKELVIIVTPHLV 1799044 + + G++ V+GG+ ++V + +P IG FK + EL+I +TP ++ Sbjct: 348 IRVPHGQTVVLGGVYSTINQQGSSRVSGISRIPGIGRLFKKKEHVTEQYELLIFLTPRIL 407 >ref|YP_024510.1|putative ribonucleotide reductase large subunit Length = 704 Score = 165 bits (418), Expect = 2e-38 Identities = 159/623 (25%), Positives = 261/623 (41%), Gaps = 23/623 (3%) Frame = +3 Query: 711885 MRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSG-THRSQLSSCYLTTVADDL 712061 +RVA+ L N+ +A E L F STPT NSG +R +LSSCYL V D + Sbjct: 123 VRVALYLFQNDY---VKARELLVQLMEQTFQPSTPTYNNSGQANRGELSSCYLFVVDDSI 179 Query: 712062 DGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQ 712241 + + A S GG+ D TR+R G+ ++ S+GV+ F K + +Q Sbjct: 180 ESLNFVEDSVANASSNGGGVAIDLTRIRPKGAPVRNRPNSSKGVIAFAKAIEHKVSIYDQ 239 Query: 712242 GGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWT 712421 GG R+G+ YL +H DI + L +K + R ++ IP+ FM+ V EG + Sbjct: 240 GGVRQGSGAVYLNIFHNDILDLLSSKKINASESVRLDKLSIGVTIPNKFMELVKEGKPFY 299 Query: 712422 LFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPW 712601 F ++ K+ E + DK+ + K A ++ + E+G+P+ Sbjct: 300 TFDTYDINKMYGKYLDELN--IDEWYDKLLNNDSIGKVKHDAREVMTDIAKTQLESGYPY 357 Query: 712602 ITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDSEI--------------AVCNLGSVN 712739 + + D N P +++G V SNLCTEI+ SEI VC LGS+N Sbjct: 358 VFYIDNANDNHPLKNLGKVKMSNLCTEISQLQEVSEIYPYSYSNQNVINRDVVCTLGSLN 417 Query: 712740 LVAHLVKQADGSFALDHDKLKRTISVAMRMLDNVIDI-NYYAVAKARNSNLKHRPVGMGI 712916 LV ++ L ++ + R L V DI + + + +N R +G+G Sbjct: 418 LVN----------VVEKGLLNESVDIGTRALTKVTDIMDLPYLPSVQKANDDIRAIGLGS 467 Query: 712917 MGFQDCLHLLRTPYASEAAVAFADRSMEAVCYYAYHASTELAEERGR-YSSYRGSLWDRG 713093 M L Y S A+ + A+ + + S +A+E G+ + + S + G Sbjct: 468 MNLHGLLAKNMISYGSREALDLVNSLYSAINFQSIKTSMLMAKETGKPFKGFEKSDYATG 527 Query: 713094 -----ILPQDTLKLLAEARGGYVEVDTSESLDWTSLRSRIATHGMRNSNCVAIAPTATIS 713258 + + +A+ +V DW L + HG+ N A APT +IS Sbjct: 528 EYFVRYIRESNQPKTDKAKKVLDKVYIPTQDDWDELAKAVKVHGLYNGYRKAEAPTQSIS 587 Query: 713259 NIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSR 713438 + ++ I P + ++ R D + Y LS Sbjct: 588 YVQNATSSIMP---------------------VPSAIENRQYGDMETYYPMPY----LSP 622 Query: 713439 IDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSLNIYM-GGASGKKLDEVYKLA 713615 I + + TA+++D ++ ++ QK DQA S +Y+ KL +Y A Sbjct: 623 ITQFFYE----GETAYKIDNKRIINTSAVVQKHTDQAVSTILYVESEIPTNKLVSLYYYA 678 Query: 713616 WLRGLKTTYYLRTMAATHVEKST 713684 W +GLK+ YY R+ + +E T Sbjct: 679 WEQGLKSLYYTRSRKLSVIECET 701 >ref|NP_612864.1|putative helicase Length = 427 Score = 165 bits (418), Expect = 2e-38 Identities = 121/430 (28%), Positives = 221/430 (51%), Gaps = 5/430 (1%) Frame = -2 Query: 2365238 HSVEAEQSVLGGLLLDNAAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTRPADVVTVY 2365059 +S+E+E+ +LG ++ DN + + L + DFY H+II+ I L + D+ + Sbjct: 5 YSIESEKIILGTIIQDNELMLKAINILGENDFYNSKHKIIFRAIKELYKNNISFDLTILS 64 Query: 2365058 EALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISADAFN 2364879 E L+ K V L+ L ++ +T A + +V++++ R+L I Sbjct: 65 EKLSNDIKKQ-VLTLSDLTEISYHTSRGA-FDSHLSLVKEKSKERKLNETCKSILTTPGT 122 Query: 2364878 PQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPSDVTGT 2364699 + K +D ++ + + + + + + ++ + E+I+ + ++ S +TG Sbjct: 123 IESK-----IDFLQNTLLEL--NSSEDKEKVYTMSEVMEKTFEKIEKAF--SSKSGITGI 173 Query: 2364698 PTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGTQ 2364519 TG +D T+G+ E I++ RPSMGKTA S+ I E + V ++M Sbjct: 174 STGIRKIDNATNGLEKKEFIVLGARPSMGKTALSLAIMENIQGN----VLYIQLDMSKEG 229 Query: 2364518 LVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQ-LFIDETGGLNPMELRSRA 2364342 + R+L S ++ ++ G+ D + + + ++S + +FI E + ++R A Sbjct: 230 MGQRLLASNSYIENGKIARGKFNDNEMKSIINVFDRLSRKENIFIYEPASITVNQIRLIA 289 Query: 2364341 RRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVIALSQLNR 2364162 +++ + G L +IIVD++ + +++G + + S IS +LKS+AKEL+V ++ L QL+R Sbjct: 290 KQIKIKHG-LDVIIVDHIGKIKPTTKG-TKYEQSSYISNTLKSIAKELNVAMVGLCQLSR 347 Query: 2364161 GLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVY--NPDSPD--KGTAEIIIGKQRN 2363994 EQR + RP++SDLR++G+IE+DADVI +YRD Y D D EI K RN Sbjct: 348 AAEQRADHRPMLSDLRDTGSIEEDADVIGLLYRDGYYRAREDKEDIVGDVLEINFAKCRN 407 Query: 2363993 GPIGPVRLTF 2363964 G G V L + Sbjct: 408 GRTGVVELQY 417 >ref|NP_932561.1|dTMP (thymidylate) synthase Length = 279 Score = 165 bits (418), Expect = 2e-38 Identities = 116/330 (35%), Positives = 158/330 (47%), Gaps = 7/330 (2%) Frame = +2 Query: 1279130 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 1279309 M QY DLV ++ G + +RTG+ T S+ G MLRFDL +GFPAVT K+LA+KS +GEL+ Sbjct: 1 MIQYKDLVEDVIANGRRKTDRTGVGTRSVFGRMLRFDLSKGFPAVTCKQLAWKSVVGELL 60 Query: 1279310 GFLRASRSAADFRALGC-------KVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQW 1279468 F+ S + R + +WDAN E A L Y G LG VYG QWRQ+ Sbjct: 61 WFISGSTNVDHLRRITHGPNSDKRTIWDANYEEQAINLG--YSDGY--LGPVYGKQWRQF 116 Query: 1279469 PGYKVLDAGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRR 1279648 G K +DQL++ +D I NP RR Sbjct: 117 -GNK-----------------------------------NPVDQLQKVIDQIKSNPDSRR 140 Query: 1279649 ILFHAWNPAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALL 1279828 +L AWNP +D +ALP CH +QF + ++SL RS DVGLG PFN+ A L+ Sbjct: 141 LLVVAWNPEDIDAMALPPCHFAFQF--EVYEGKLSLMWSQRSVDVGLGLPFNIASYALLV 198 Query: 1279829 ELVGRLTGYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYAKTGVY 1280008 ++ + G + D H+YEN +D L R+P P+L + V A+ Sbjct: 199 HIIAGICGLEVGELVFSGADVHVYENHVDDLVEIFWRDPRPLPKLAYYD-VANLAE---- 253 Query: 1280009 APEWLEQIEPSDFSLVGYRHHEPLTAPMAV 1280098 L + D+ L Y H P+ PMAV Sbjct: 254 ----LRTMTVDDYVLTEYDPHPPIKMPMAV 279 >ref|NP_542569.1|ribonucleotide reductase Length = 805 Score = 162 bits (410), Expect = 2e-37 Identities = 163/615 (26%), Positives = 259/615 (42%), Gaps = 97/615 (15%) Frame = +3 Query: 711831 RYFLH-VEGTRIEMPQAFFMRVAMGLSLNEIDRE--TRAIEFYNVLSSFDFMSSTPTLFN 712001 RYF EG IE F RVA ++ E D + T A EF + + + FM ++PTL N Sbjct: 44 RYFRKDSEGNIIEGADDLFRRVAENVAGAEEDGDFDTWADEFEHQMKTLRFMPNSPTLMN 103 Query: 712002 SGTHRSQLSSCYLTTVADDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGK 712181 +GT +QLS+C++ DD++ I+E ++ AL+ + GG+G ++ +R G+ I T G+ Sbjct: 104 AGTDMNQLSACFVIEPRDDMEDIFETAQQAALIFQSGGGVGYAFSHLRPKGAFINSTGGE 163 Query: 712182 SQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMN 712361 + G V F++V ++T V QGGKR+GA L + H DI F+ ++N G+ + N Sbjct: 164 ASGPVSFMRVFDETCNQVKQGGKRRGAQMGILRADHPDIGRFIVAKRNEGE----FANFN 219 Query: 712362 TANWIPDLFMKRVMEGADWTLFSPST----------------CPDLHDKFGAEF------ 712475 + D F++ V +TL+ P T P+ D F Sbjct: 220 ISVATTDNFIEAVDAQESYTLYDPETDYEEPYTVRELSAHFYSPEYQDNPRDAFDDGEGA 279 Query: 712476 ---EAAYTAYEDKV--------------------ARGEIKLFKKIPAAQLWRKMLGMLFE 712586 E + Y D++ R E+ ++PAA +W M+ + Sbjct: 280 VVEENLWRDYADEIECELYGERVTLREKWEGHEGLRLEVGEPMELPAAFIWDVMIDGAWR 339 Query: 712587 TGHPWI-TFKDPCNVRSPQQHVGVV--------HSSNLCTEITLNTSDSEIAVCNLGSVN 712739 G P + F++ S +QH V +++N C E L E CNLG +N Sbjct: 340 NGEPGLFNFEE-----SNRQHSFDVEEYPEFRMNATNPCAEQML----VEYEACNLGHIN 390 Query: 712740 LVAHLVKQADG---------------------------SFALDHDKLKRTISVAMRMLDN 712838 L L + A A+D ++L RTI R LDN Sbjct: 391 LSLMLSEDAPTYDEFLSDKLEDVASGDLSTREAVEWYFETAVDFNELDRTIEAGTRFLDN 450 Query: 712839 VIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVAFADRSMEAVCYYA 713018 V+ + + + + R +G+GIMGF L+ + PY ++ + A M + Sbjct: 451 VVTQSDFPIPEITERVGGMRKIGLGIMGFAQMLYQMGVPYGTQDSYEVARCVMRYIDRRG 510 Query: 713019 YHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTSLRSRI 713198 AS LA ERG + S WD+ D +E +W + R+ + Sbjct: 511 TWASHRLALERGAF-----SYWDKS-----------------KYADPTEYDEWFAARTGL 548 Query: 713199 ATHG------MRNSNCVAIAPTATISNIIGVSACIEP-----TFQNLYVKSNLSGEFTVV 713345 +RN N IAPT T S I + EP F+N V ++ G+ +V Sbjct: 549 DPEDWAGGFPIRNHNITTIAPTGTTSMIGNTTGGCEPAYNVANFKN--VSEDIQGDDLLV 606 Query: 713346 --NEYLVRDLKERGL 713384 ++Y +R L+E L Sbjct: 607 EFDDYFLRTLEENDL 621 >ref|NP_803269.1|helicase DnaB Length = 413 Score = 161 bits (408), Expect = 3e-37 Identities = 101/317 (31%), Positives = 173/317 (54%), Gaps = 5/317 (1%) Frame = -2 Query: 2364878 PQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPSDVTGT 2364699 P + L+DE + + +I G + F+E E ++ LY + + Sbjct: 113 PTNQNFNNLIDELKD-LKTITNKKEDGTKKFVE---------EFVEELYSDSPKKQIK-- 160 Query: 2364698 PTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGTQ 2364519 TG+ +D G+ +LI++A RPS+GKT F++N+ +A + G + FS+E GT Sbjct: 161 -TGYKLMDYKIGGLEPSQLIVIAARPSVGKTGFALNMMLNIA-QNGYKTSFFSLETTGTS 218 Query: 2364518 LVMRMLGSIGRLDQHRMRTGR-LTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRA 2364342 ++ RML +I ++ +++ R LT +D KLT+A+ K+ + + I + + P ++R++A Sbjct: 219 VLKRMLSTITGIELTKIKEIRNLTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQA 278 Query: 2364341 RRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVIALSQLNR 2364162 R + +I +DYLQLM ++ + R + +ISR LK +A E ++ LSQLNR Sbjct: 279 MR---HSDRQQVIFIDYLQLMDTDAKVDRRVA-VEKISRDLKIIANETGAIIVLLSQLNR 334 Query: 2364161 GLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPD----KGTAEIIIGKQRN 2363994 G+E R +KRP++SD++ESG IE DA + + +YRD+ YN D D K E I K ++ Sbjct: 335 GVESRQDKRPMLSDMKESGGIEADASLAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKD 394 Query: 2363993 GPIGPVRLTFLGQYTKF 2363943 G G + + + +F Sbjct: 395 GETGIIEFEYYKKTQRF 411 >ref|NP_817531.1|gp82 Length = 420 Score = 160 bits (405), Expect = 6e-37 Identities = 138/443 (31%), Positives = 208/443 (46%), Gaps = 10/443 (2%) Frame = -2 Query: 2365244 PPHSVEAEQSVLGGLLLDNAAWDRIADFLSQGDFYRYDHRIIYEHIGRLIASTRPADVVT 2365065 PP + AE +VLG +LL A + + L DFYR +H +Y+ I L + ADV+T Sbjct: 5 PPQDLAAESAVLGAMLLSKNATPAVMEILKPEDFYRPNHATVYQIITDLYMAGESADVIT 64 Query: 2365064 VYEALTTSGKADDVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISADA 2364885 V L G + +G L+ + QN PSA N YA IV+D+A RRL+ + D Sbjct: 65 VAAELGKQGMLNKIGAPQLLD-MQQNVPSALNATTYATIVKDKARQRRLIELGDRCRQLG 123 Query: 2364884 FN--PQGKEVRQLLDEAESKVFSIAEDGARGNQGFLEIGPLLTQVVERIDTLYHTANPSD 2364711 + +EV L+ +A + S E GF Q+VE+ T PSD Sbjct: 124 YTDATTSEEVDALIAQA-GQFLSEVEQPTGNGLGF-------AQLVEKWRTWQD--QPSD 173 Query: 2364710 VTGTPTGFVDLDRMT--SGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSM 2364537 V PT + +L+R G G L++V GRP GK+ +NI A E L VFS+ Sbjct: 174 V--IPTPWPELNRWIPGGGFSPGNLVVVGGRPGAGKSNAGLNIIS-KAAEDKLKSLVFSV 230 Query: 2364536 EMPGTQLVMRML--GSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNP 2364363 EM ++ R+L G+ L Q R+ + + W ++ + + L I + L Sbjct: 231 EMDDVEVFSRLLAAGTWSPLSQIIGRS--MENSTWERVEEYLDTHKDLPLEIHDDASLRV 288 Query: 2364362 MELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVI 2364183 E+ SR R K +++VDY QLM S+ + T I+ ISRSLK AK+L + V+ Sbjct: 289 EEVVSRCR-----VRKPKVVMVDYAQLMENSNPKWDERTNIAHISRSLKVAAKQLHMVVV 343 Query: 2364182 ALSQLNRGLEQRPNKR----PVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAEI 2364015 SQLNR + K P +++L ++ +DADV+L + + D + Sbjct: 344 LASQLNRENTKSTAKNGPAIPDLTNLAGGDSLGRDADVVLLLQK--------ADDNIIRM 395 Query: 2364014 IIGKQRNGPIGPVRLTFLGQYTK 2363946 + K RNG G + L G ++ Sbjct: 396 HVEKNRNGRTGMIELVARGAMSR 418 >ref|NP_046685.1|putative DNA polymerase Length = 1305 Score = 157 bits (397), Expect = 5e-36 Identities = 162/683 (23%), Positives = 299/683 (43%), Gaps = 69/683 (10%) Frame = -2 Query: 2903090 DDYLVQLSKEGLETRLAQLYPAEAERDAQRDTYYK---RLEFECGTITKMG------FPG 2902938 D YL++L ++G E +L + R+ ++K R+ E G + ++ Sbjct: 350 DRYLLKLIEDGFEEKLKT-------SELTREAFHKILNRINVELGELWEISQKLNQSMSS 402 Query: 2902937 YFLIVADFIN--WAKNNGVP--VGPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPE 2902770 Y++ V + IN W G VG RGS AG LV Y L T ++P++Y+L R ++ Sbjct: 403 YYITVREIINIIWDDECGGDSLVGAARGSAAGYLVNYLLDNTQINPMQYDLPHWRHIHKS 462 Query: 2902769 RVSMPDFDIDFCQHGRDRVIQYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMF 2902590 R +PD DID R ++++ ++E++G V QIATFGT +K+A++ R L + Sbjct: 463 RPDLPDIDIDTEGSKRQKILKALRERFGDKRVLQIATFGTEGSKSALQTACRGLGIDNDI 522 Query: 2902589 TDGIAKLIPFKPG-----KHVTIADAMKEEPQLQERYDHEDEVHQLLDLAQRVEGLTRNV 2902425 + ++ +IPF+ G KH D ++E ++ L + A ++EGLT Sbjct: 523 SQYLSGMIPFERGSNWPLKHCFYGDKETGRKPIKEFIREVEQYPNLKETALKIEGLTNKR 582 Query: 2902424 GMHAGGVLIAPGKLTDFCPLYTQGDDGGVVSQYDKDDVEAVGLVKFDFLGLTTL------ 2902263 HA GV+I + T + + G ++Q++ D EA+G VKFD L + L Sbjct: 583 SSHAAGVIIFNDEYTKSNAM-MKTPKGAYITQFNMGDSEAMGSVKFDLLTIEALDKIRVT 641 Query: 2902262 -------TILDW----AERYIRRLDPSKADWALAQVPLDDPASFQILKKANTVAVFQLES 2902116 ++W E Y + + P ++ +D +++ + +FQ + Sbjct: 642 LDQLIENNEIEWQGSLKETYNKYIHPDVIEY-------EDDKLWEMAGNGEIMDLFQFST 694 Query: 2902115 R-GMQGMLKDAQPDRFEDII--ALVSLYRPGPMDLIPSFCARKHGREK---------VEY 2901972 G Q ++K + E + +L+ L G + ++ K+ K + Sbjct: 695 EVGHQSVVKVKPKNLLEAAVTNSLMRLMSDGEEQPVDTYVKYKNNLNKWYEEMTRYGLSE 754 Query: 2901971 PDPRV-EPVLKETYGIMVYQEQVMQMA--QIIGGYSLGGADLLRRAMGKKKPEEMAKHRE 2901801 + RV E LK+ YG+ QE VMQM + I + + ++ LR+++ KKK + + + E Sbjct: 755 KEIRVMERHLKDIYGVADTQEVVMQMVMDKDIANFDIKESNYLRKSIAKKKEDVLKEVEE 814 Query: 2901800 IFAEGAATNGLTREKSDEIFDL-MEKFAGYGFNKSH-XXXXXXXXXXXXXXXAHHPAEFM 2901627 +F + G + + ++++ ++ GY F+ H ++P + Sbjct: 815 LFFKKGKEIGTSDNLLNYVWNVQFKRQFGYSFSLLHTLAYSIIALQELNLNYRYNPLYWN 874 Query: 2901626 AANMTL----------------AMDDTDKVKILFDDCVVNNLAVLPPDINQSHYRFEPVA 2901495 A +T+ A + KV + + + PDIN++ + F Sbjct: 875 TACLTVNSGGIDTEDTKDNKKTAATNYGKVASAIGNIRQRGIKIDLPDINKADFGFR--- 931 Query: 2901494 EADGKRSRTIRYGLGAVKGSGQNAIEEILRAREEKAFTDLFDFCERIDRR-VVNRRTVEA 2901318 + +I +GL + G G + I I+ R ++D DF ER+ + ++ + V Sbjct: 932 --TDINNNSILFGLKGMNGIGDDVIHHIVLNR---PYSDFNDFIERMFKSGIIKKGQVIQ 986 Query: 2901317 LIRAGAFDSLNTNRAQLIASVPL 2901249 LI+ G FDS + + A + L Sbjct: 987 LIKGGCFDSFGNRQEIMKAFISL 1009 Score = 84.7 bits (208), Expect = 4e-14 Identities = 96/433 (22%), Positives = 179/433 (41%), Gaps = 43/433 (9%) Frame = -2 Query: 3452207 KVSKQIRYELDLIAQLSYE------PFFLTVYDIVKY-----ARSQNILCQGRGSAANSV 3452061 K+ +I EL + ++S + +++TV +I+ +++ RGSAA + Sbjct: 377 KILNRINVELGELWEISQKLNQSMSSYYITVREIINIIWDDECGGDSLVGAARGSAAGYL 436 Query: 3452060 VCFCLGITEVNPEQSTMLFERFISAERGEPPDIDVDFEHQRREEVIQHIYEKYGHNRAAL 3451881 V + L T++NP Q + R I R + PDID+D E +R+++++ + E++G R Sbjct: 437 VNYLLDNTQINPMQYDLPHWRHIHKSRPDLPDIDIDTEGSKRQKILKALRERFGDKRVLQ 496 Query: 3451880 AAAVSTYRPRGVLRETGKALGVDPMLVDRVAKAHRWFDGSRDLLQQF----STIGLDP-- 3451719 A T + L+ + LG+D + ++ + GS L+ G P Sbjct: 497 IATFGTEGSKSALQTACRGLGIDNDISQYLSGMIPFERGSNWPLKHCFYGDKETGRKPIK 556 Query: 3451718 ----ETPLIXXXXXXXXXXLNFPRHLSQHSGGFVISRGKLTRLVPVENAAM---DGRRVI 3451560 E S H+ G +I + T+ NA M G + Sbjct: 557 EFIREVEQYPNLKETALKIEGLTNKRSSHAAGVIIFNDEYTK----SNAMMKTPKGAYIT 612 Query: 3451559 QWDKDDLEALGLMKVDVLALGMLSALHRAFDM-----RTAWRGP-PEPDGEPFTLKHIPQ 3451398 Q++ D EA+G +K D+L + L + D W+G E + I Sbjct: 613 QFNMGDSEAMGSVKFDLLTIEALDKIRVTLDQLIENNEIEWQGSLKETYNKYIHPDVIEY 672 Query: 3451397 DDKATYDMICRADTVGVFQIESRAQMSMLPRLRPQTYYDLVIEVAIVR-PGPIQGGAVHP 3451221 +D ++M + + +FQ + + +++P+ + + +++R + V Sbjct: 673 EDDKLWEMAGNGEIMDLFQFSTEVGHQSVVKVKPKNLLEAAVTNSLMRLMSDGEEQPVDT 732 Query: 3451220 YLKRRQGIEK-----VSYPKEE-----LKPALERTYGVPIFQEQVMQIAM--IAAGFTPG 3451077 Y+K + + K Y E ++ L+ YGV QE VMQ+ M A F Sbjct: 733 YVKYKNNLNKWYEEMTRYGLSEKEIRVMERHLKDIYGVADTQEVVMQMVMDKDIANFDIK 792 Query: 3451076 EADQLRRAMAAWK 3451038 E++ LR+++A K Sbjct: 793 ESNYLRKSIAKKK 805 >ref|NP_758903.1|ORF10 Length = 309 Score = 153 bits (386), Expect = 9e-35 Identities = 88/300 (29%), Positives = 156/300 (52%), Gaps = 5/300 (1%) Frame = +2 Query: 2391359 MWFKNLQLHRLPAPWAVTPDQMEKWLAPHAFQPGSSVEMQSHGWASPRDDGALVYS--IN 2391532 MWFKN +R + +Q+EK L + F+ S ++ S GW+ + A ++S N Sbjct: 1 MWFKNAIFYRFDKAKELDFEQLEKALQEYQFKEAGSQQVSSFGWSKVLGESAELFSHVAN 60 Query: 2391533 RQMLLTFRAEKKLLPASVVNQVTKERALEVEEQQGFKVGRKQMRELKEQVTDELLPRAFT 2391712 +++ + ++K+LPA V+ + K R EV ++ KVG+K+ LK+QV ELLP+AF+ Sbjct: 61 GCVMICAQRQEKILPADVIRRAHKARIDEVISREARKVGKKEREHLKDQVIQELLPKAFS 120 Query: 2391713 IRRDTRVWIDTVNGWLVIDAASQAVADDVRGLLVKSIDQLPLAGVQVAHSPVAAMTDWLL 2391892 + +IDT G V+DA++ A+D+ LL KS+ LP+ + P MT+WL Sbjct: 121 RYSKSFAYIDTKRGLFVVDASAFKKAEDLGALLRKSLGSLPIVPTHTKNMPTDVMTNWLR 180 Query: 2391893 S-GEAPGGFTVDQDAELRSSGEGGATVRYVGHALEANDMRRHIEAGKQCMRLAMTWDNRI 2392069 S + P G + ELR + G VR + +++ H+ GK R+A+ W++++ Sbjct: 181 SLDKLPAGIVLGDAVELRDPVQDGGIVRLTRQEITEDEVTTHLNVGKVATRIAINWEDQV 240 Query: 2392070 SFVLTPSLTIKRVTPLDVIKEAA--DPTAQNDAERFDSDVTLMTGELGRMLTSLIDILGG 2392243 + VL + + + D + E A ++ A +FD+D +M + ++ + + GG Sbjct: 241 NMVLHEDVRLTGIKFDDRLVERAMDQGDGESAAAQFDADFVIMAETMAQLYVRITGLFGG 300 >ref|NP_059582.1|O-antigen conversion protein Length = 310 Score = 151 bits (381), Expect = 3e-34 Identities = 92/307 (29%), Positives = 159/307 (51%), Gaps = 6/307 (1%) Frame = +2 Query: 2354057 EVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRDRSAAML-----ADQFH 2354221 ++S+++PV+NEED + + + + + E++ INDGS+D + +++ +D Sbjct: 2 KISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPLV 61 Query: 2354222 VRPDTTRIVLLNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGKLIAKMREGYDY 2354401 + TR N+G+ A+ AG + G+ VI +D DLQ+P E I LI K + G D Sbjct: 62 IPLSFTR------NFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADM 115 Query: 2354402 VGSIRKQRQ-DSLWRRKASQMMNRLRERITRIKMTDQGCMLRAYSRRIIDTINVCGEVNT 2354578 V + R R D +RK ++ +L +I+ K+ + R SR +++ I E N Sbjct: 116 VLAKRSDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNL 175 Query: 2354579 FIPALAYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVPLQWLSFIGVI 2354758 F+ + K ++ A ER AG+SK++ + L L + +T FS PL+ ++IG+ Sbjct: 176 FMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLF 235 Query: 2354759 LSLGSXXXXXXXXXXXXIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRA 2354938 ++ S I G V G +L FL GV + +G+LGEY+GRIY + + Sbjct: 236 IAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQ 295 Query: 2354939 RPRYLIQ 2354959 RP+Y+++ Sbjct: 296 RPKYILK 302 >ref|NP_720276.1|GtrB Length = 325 Score = 150 bits (380), Expect = 5e-34 Identities = 92/307 (29%), Positives = 159/307 (51%), Gaps = 6/307 (1%) Frame = +2 Query: 2354057 EVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRDRSAAML-----ADQFH 2354221 ++S+++PV+NEED + + + + + E++ INDGS+D + +++ +D Sbjct: 17 KISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPLV 76 Query: 2354222 VRPDTTRIVLLNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGKLIAKMREGYDY 2354401 + TR N+G+ A+ AG + G+ VI +D DLQ+P E I LI K + G D Sbjct: 77 IPLSFTR------NFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADM 130 Query: 2354402 VGSIRKQRQ-DSLWRRKASQMMNRLRERITRIKMTDQGCMLRAYSRRIIDTINVCGEVNT 2354578 V + R R D +RK ++ +L +I+ K+ + R SR +++ I E N Sbjct: 131 VLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNL 190 Query: 2354579 FIPALAYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVPLQWLSFIGVI 2354758 F+ + K ++ A ER AG+SK++ + L L + +T FS PL+ ++IG+ Sbjct: 191 FMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLF 250 Query: 2354759 LSLGSXXXXXXXXXXXXIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRA 2354938 ++ S I G V G +L FL GV + +G+LGEY+GRIY + + Sbjct: 251 IAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQ 310 Query: 2354939 RPRYLIQ 2354959 RP+Y+++ Sbjct: 311 RPKYILK 317 >ref|YP_006358.1|GtrB Length = 310 Score = 150 bits (380), Expect = 5e-34 Identities = 92/307 (29%), Positives = 159/307 (51%), Gaps = 6/307 (1%) Frame = +2 Query: 2354057 EVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRDRSAAML-----ADQFH 2354221 ++S+++PV+NEED + + + + + E++ INDGS+D + +++ +D Sbjct: 2 KISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPLV 61 Query: 2354222 VRPDTTRIVLLNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGKLIAKMREGYDY 2354401 + TR N+G+ A+ AG + G+ VI +D DLQ+P E I LI K + G D Sbjct: 62 IPLSFTR------NFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADM 115 Query: 2354402 VGSIRKQRQ-DSLWRRKASQMMNRLRERITRIKMTDQGCMLRAYSRRIIDTINVCGEVNT 2354578 V + R R D +RK ++ +L +I+ K+ + R SR +++ I E N Sbjct: 116 VLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNL 175 Query: 2354579 FIPALAYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVPLQWLSFIGVI 2354758 F+ + K ++ A ER AG+SK++ + L L + +T FS PL+ ++IG+ Sbjct: 176 FMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLF 235 Query: 2354759 LSLGSXXXXXXXXXXXXIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRA 2354938 ++ S I G V G +L FL GV + +G+LGEY+GRIY + + Sbjct: 236 IAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQ 295 Query: 2354939 RPRYLIQ 2354959 RP+Y+++ Sbjct: 296 RPKYILK 302 >ref|NP_944991.1|putative ribonucleoside triphosphate reductase alpha chain Length = 744 Score = 150 bits (380), Expect = 5e-34 Identities = 178/763 (23%), Positives = 302/763 (39%), Gaps = 38/763 (4%) Frame = +3 Query: 711480 IVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRILLHTIRREILGEEVVQA 711659 + E +K +Y+G +++ + I + ++ YS + R+LL I +E G Sbjct: 37 VTMEAMKRVYEGCTTKEMHQAMIDVC--VDKQTQEYSDMAGRLLLGIIYKEAFGGFTKVP 94 Query: 711660 EMSTRYAEYFPQFLKRGVDAGXXXXXXXXXXXXXXGEA-LDANRDLQFGYLGLQTLYDRY 711836 + T F+K AG + + ++D+ +GY L+ D+Y Sbjct: 95 TLVT--------FVKNMERAGLWEKMDYSQEELEYLQGYIVHSKDISYGYAVLKQFRDKY 146 Query: 711837 FLH--VEGTRIEMPQAFFMRVAMGLSLNEIDRETR------AIEFYNVLSSFDFMSSTPT 711992 + G E PQ FM G+++ +++ + I+ Y LS + TP Sbjct: 147 GIRDIKTGRLFESPQFMFM----GMAMKAFEKQPKHRRLQDVIKLYTYLSDLKINAPTPY 202 Query: 711993 LFNSGTHRSQLSSCYLTTVADDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGT 712172 L +S +SC L D + + A K ++ G+G R +G I+ Sbjct: 203 LNGLRATKSGYASCCLIKANDTAESLGIAAKVAYDMTTKQAGIGM-LMETRTIGDGIRQN 261 Query: 712173 NGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 712352 + G +P+ K+V ++V N+ R G+ + + IE+ L L+ T +R + Sbjct: 262 TIEHMGKLPYYKLVR-SSVEANKQKSRGGSANNFYTALDPQIEDLLRLKHPTTVPSKRIN 320 Query: 712353 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVA------- 712511 +M+ + D F + V DW LFS P L+D F YTA D+ A Sbjct: 321 EMDYSFGTNDYFWQCVQYDTDWLLFSYKDAPKLYDMF-------YTASADEFAMAVGHAV 373 Query: 712512 RGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITL 712691 +K +++ A ++ + + + TG + F + N +P + + SNLC EI L Sbjct: 374 HSGVK-HRRVKAREIAKLFIQQRYATGRVYPFFTNNANTHTPFKEP--LKMSNLCMEIVL 430 Query: 712692 NT----------------SDSEIAVCNLGSVNLVAHLVKQADGSFALDHDKLKRTISVAM 712823 D E+A+C L S LVA + + D+ A+ Sbjct: 431 PVYGFEKETDLYRDDAVKEDGEVALCFLAS--LVAGRISE---------DEYADVAYYAL 479 Query: 712824 RMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVAFADRSMEA 713003 M+D+VID+ Y RN K R VG+G+ L Y+S A E Sbjct: 480 AMVDSVIDLMDYPYPSMRNHVQKRRSVGIGLTNVAHYLAKNYVNYSSRAGKTKLHELAEM 539 Query: 713004 VCYYAYHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTS 713183 YY + AS LA+ERG + + + G +P T + + D DW Sbjct: 540 HSYYLHEASLRLAKERGVPEYMKFTKYPEGWVPPKTANKKIDEKH-----DAKLRYDWDD 594 Query: 713184 LRSRIATH-GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLV 713360 L RI + G+RNS A P + S + + P + K + +G ++V Sbjct: 595 LAQRIKENGGIRNSVLEAYMPNESSSLATNTTNGLYPIRDFILTKKSATGNVL----FIV 650 Query: 713361 RDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWI 713540 D +E LKY +Y A+++D +++ + QK+ Sbjct: 651 PDYEE-----------LKY-----------------VYEIAWDIDTFDMIDCYAIVQKFT 682 Query: 713541 DQAQSLNIYMGGASGKKLDEVYKLAWL-----RGLKTTYYLRT 713654 QA S + Y+ A KK+ L ++ G+KT YYL + Sbjct: 683 GQAISSDFYVDYAKSKKVSLAQALKYMIYANSVGMKTMYYLNS 725 >ref|YP_006920.1|putative thymidylate synthase Length = 279 Score = 149 bits (376), Expect = 1e-33 Identities = 104/329 (31%), Positives = 154/329 (46%), Gaps = 7/329 (2%) Frame = +2 Query: 1279130 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 1279309 M+QYL ++ ++ G + +RTG T+S+ + +FDL++GFPAVTTK+LA+KS +GEL+ Sbjct: 1 MQQYLKILTDVILLGEPRNDRTGTGTVSIFDSYAKFDLREGFPAVTTKRLAWKSVVGELL 60 Query: 1279310 GFLRASRSAADFRALGC-------KVWDANANENAQWLANPYRQGVDDLGDVYGVQWRQW 1279468 FL S + D R +W N + A ++ Y +G +LG VYG QWR + Sbjct: 61 WFLSGSTNLHDLRVFTFGRDEGQWTIWTPNYEDQA--ISMGYDKG--NLGPVYGKQWRNF 116 Query: 1279469 PGYKVLDAGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPADRR 1279648 G DQ+ + ++ + NP RR Sbjct: 117 GGR---------------------------------------DQILELIEGLKNNPHGRR 137 Query: 1279649 ILFHAWNPAVLDQIALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFNLTEGAALL 1279828 L AWN A LD++ALP CH +Q + + L RS D LG PFN+ A L Sbjct: 138 HLVSAWNVAELDKMALPPCHYGFQCYVS-NDGYLDLKWTQRSVDCFLGLPFNIASYALLT 196 Query: 1279829 ELVGRLTGYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYAKTGVY 1280008 ++ +LTG PR+ + GD HIY + ++ ++ Q+ R+P P L + E V Y Sbjct: 197 HILAKLTGLKPRYLIFSGGDTHIYNDHMEQVEEQVKRKPRPLPTLVMPEFVDLYDLLENN 256 Query: 1280009 APEWLEQIEPSDFSLVGYRHHEPLTAPMA 1280095 W F L GY H L A M+ Sbjct: 257 TAAW-------SFHLEGYDPHPALKAKMS 278 >ref|NP_944186.1|hypothetical protein Length = 347 Score = 148 bits (374), Expect = 2e-33 Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 1/188 (0%) Frame = -1 Query: 3692280 MNIYAVGGAIRDELLGVPVQDRDYVVVGATPEQMAAQGFRPVGKDFPVFLHPRTQEEYAL 3692101 MNIY VGGA+RD ++ +DRDYVVVG+T ++M A+G++ VG DFPV+L +EYAL Sbjct: 1 MNIYLVGGAVRDMVMNREPKDRDYVVVGSTHDEMIAKGYKQVGADFPVYL-DHLGQEYAL 59 Query: 3692100 ARTERKTAAGYHGFQFHYAPDVTLDEDLARRDLTVNAMAREVSPEGELVGPVIDPFDGQA 3691921 ARTER T GY+ F + P+VTL++DL RRD T+NAMA ++ G VIDP++GQ Sbjct: 60 ARTERSTGKGYNDFVTDFNPNVTLEQDLKRRDFTMNAMALGMN------GVVIDPYNGQQ 113 Query: 3691920 DLRARVFRHVS-DAFVEDPVXXXXXXXXXXXXADFTVADETLALMRRMVDAGEVDALVPE 3691744 D++ RV V+ AF EDPV DF ++ T+ + R + G +D L E Sbjct: 114 DIKERVVNVVNPQAFHEDPV-RVLRACRFAARYDFRLSTLTMECILRCIKDGRMDHLTSE 172 Query: 3691743 RVWQEIAR 3691720 R+W E + Sbjct: 173 RIWLEFEK 180 Score = 58.2 bits (139), Expect = 4e-06 Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 1/185 (0%) Frame = -1 Query: 899607 FIVGGAVRDLLLGIAPKDFD-VATDATPTEVXXXXXXXXXXXXXXXIVHVQFGQELIEVS 899431 ++VGGAVRD+++ PKD D V +T E+ + H+ GQE Sbjct: 4 YLVGGAVRDMVMNREPKDRDYVVVGSTHDEMIAKGYKQVGADFPVYLDHL--GQEYALAR 61 Query: 899430 TFRALVDXXXXXXXXXXPKRLKRDELDRRTHAVDASGRVLRDNVWGEQHEDAARRDFTIN 899251 T R+ NV EQ D RRDFT+N Sbjct: 62 TERSTGKGYNDFVTD------------------------FNPNVTLEQ--DLKRRDFTMN 95 Query: 899250 AMYYDPSTQTVLDYHDGMADVRARLLRMIGDPATRFREDPVRMLRVVRFAAKLGFEIEPH 899071 AM + V+D ++G D++ R++ ++ A F EDPVR+LR RFAA+ F + Sbjct: 96 AMALGMNG-VVIDPYNGQQDIKERVVNVVNPQA--FHEDPVRVLRACRFAARYDFRLSTL 152 Query: 899070 TREPI 899056 T E I Sbjct: 153 TMECI 157 >ref|NP_599056.1|bactoprenol glucosyltransferase Length = 307 Score = 147 bits (370), Expect = 7e-33 Identities = 88/302 (29%), Positives = 156/302 (51%), Gaps = 1/302 (0%) Frame = +2 Query: 2354057 EVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRDRSAAMLADQFHVRPDT 2354236 ++S+++PV+NEE+ + + + + E++ INDGS+D + +++ + V Sbjct: 2 KISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSKDATESII-NALAVSDPL 60 Query: 2354237 TRIVLLNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGKLIAKMREGYDYVGSIR 2354416 + N+G+ A+ AG + G+ VI +D DLQ+P E I LI K + G D V + R Sbjct: 61 VVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR 120 Query: 2354417 KQRQ-DSLWRRKASQMMNRLRERITRIKMTDQGCMLRAYSRRIIDTINVCGEVNTFIPAL 2354593 R D +RK ++ +L +I+ K+ + R SR +++ I + E N F+ + Sbjct: 121 SDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGI 180 Query: 2354594 AYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVPLQWLSFIGVILSLGS 2354773 + +E ER AG SK++ + L L + +T FS PL+ ++IG+ ++ S Sbjct: 181 LSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASIS 240 Query: 2354774 XXXXXXXXXXXXIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRARPRYL 2354953 + G V+G +L FL GV + +G+LGEY+GRIY + + RP+Y+ Sbjct: 241 FLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYIESKHRPKYI 300 Query: 2354954 IQ 2354959 I+ Sbjct: 301 IK 302 >ref|YP_164278.1|RdgC exonuclease Length = 307 Score = 147 bits (370), Expect = 7e-33 Identities = 93/272 (34%), Positives = 150/272 (55%), Gaps = 7/272 (2%) Frame = +2 Query: 2391455 PGSSVEMQSHGWASP--RDDGALVYSINRQMLLTFRAEKKLLPASVVNQVTKERALEVEE 2391628 P +S E+ ++G+A P + D LV N L+ R E+K+LP SVVN+ KE+ E+EE Sbjct: 32 PCASQELTTYGFAPPVGKGDAPLVREANGFWLICCRKEEKILPGSVVNEALKEKVEEIEE 91 Query: 2391629 QQGFKVGRKQMRELKEQVTDELLPRAFTIRRDTRVWIDTVNGWLVIDAASQAVADDVRGL 2391808 Q KV +K+ +LK+++ LLPRAFT R+ T I G +++D A+ A+D+ Sbjct: 92 TQQRKVYKKERDQLKDEIVQTLLPRAFTRRKRTFAAIMPAQGLVIVDTATAKAAEDLLST 151 Query: 2391809 LVKSIDQLPLAGVQVAHSPVAAMTDWLLSGE--APGGFTVDQDAELRSSGEGGATVRYVG 2391982 L +++ LP+ + SP A MT+WL S E A G F + A LR + E G ++ Sbjct: 152 LREALGSLPVRPIATKVSPTATMTEWLRSQETNAGGDFWLCDGALLRDTDEQG-SITAKH 210 Query: 2391983 HALEANDMRRHIEAGKQCMRLAMTWDNRISFVLTPSLTIKRVTPLDVIKEAADPTAQNDA 2392162 L ++ +R+H+++GK +LA+ W + FVL L I+ + D+++E A A D+ Sbjct: 211 QDLTSDVIRQHLDSGKSVTKLALAWKKDLYFVLDEGLVIRSLRFDDLLQERALDDAGKDS 270 Query: 2392163 ERF---DSDVTLMTGELGRMLTSLIDILGGEQ 2392249 + F D+ LM + + L+ LGGE+ Sbjct: 271 DEFAQADASFVLMMLTFQQFIPELLVALGGEE 302 >ref|YP_164279.1|single-stranded DNA-binding protein Length = 167 Score = 144 bits (363), Expect = 4e-32 Identities = 69/108 (63%), Positives = 84/108 (77%), Gaps = 3/108 (2%) Frame = -1 Query: 3396216 VNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGDFKEMTEWHRVAFFGRLA 3396037 VNKVILVG+LG DP+ R P G AV ++ LAT++ +KDK +G +E TEWHRV FGRLA Sbjct: 5 VNKVILVGHLGQDPDARSTPGGKAVTSLSLATSESWKDKQTGQQQERTEWHRVVLFGRLA 64 Query: 3396036 EIVSEYLKKGSSVYIEGRIRTRKWQGQDGQDRYSTEIVAD---QMQML 3395902 EI ++YL+KGS VYIEG +RTRKWQGQDGQD YSTE+V D MQ+L Sbjct: 65 EIAAQYLRKGSQVYIEGSLRTRKWQGQDGQDHYSTEVVVDINGNMQLL 112 >ref|NP_958203.1|gene 27 protein Length = 157 Score = 142 bits (359), Expect = 1e-31 Identities = 66/108 (61%), Positives = 86/108 (79%), Gaps = 3/108 (2%) Frame = -1 Query: 3396216 VNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGDFKEMTEWHRVAFFGRLA 3396037 VNKVI++G LG DPE+RY PSG A AN+ +AT+++++DK +G+ KE TEWHRV G+LA Sbjct: 6 VNKVIIIGRLGHDPEIRYSPSGTAFANLTVATSEQWRDKQTGEQKEQTEWHRVVMSGKLA 65 Query: 3396036 EIVSEYLKKGSSVYIEGRIRTRKWQGQDGQDRYSTEI---VADQMQML 3395902 EI SEYL+KGS VY+EG++RTRKWQ Q GQDR++TE+ V MQML Sbjct: 66 EIASEYLRKGSEVYLEGKLRTRKWQDQSGQDRFTTEVIVGVGGTMQML 113 >ref|YP_006924.1|putative aerobic ribonucleoside diphosphate reductase, large subunit Length = 811 Score = 139 bits (350), Expect = 1e-30 Identities = 165/735 (22%), Positives = 284/735 (38%), Gaps = 45/735 (6%) Frame = +3 Query: 711498 KNLYDGVPMSQ-VYDSAILAARTMIEKDPAYSQVTSRILLHTIRREILGEEVVQAEMSTR 711674 K L GV S + D+ I AA ++I+ +PAY + L +R+ + Sbjct: 82 KTLPKGVVDSDTLMDALIKAAESLIKDNPAYDVPAKELRLAQMRKRL------------- 128 Query: 711675 YAEYFPQFLK----RGVDAGXXXXXXXXXXXXXX---GEALDANRDLQFGYLGLQTLYDR 711833 Y + P L+ V G + +D +RD F GL+ +D+ Sbjct: 129 YDSFEPPSLRFFHDHMVSVGAWEDMSAWITDEQFEALNQVIDHDRDRLFTSGGLKQFFDK 188 Query: 711834 YFLH--VEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSG 712007 Y G E PQ +M +AM + AI+ YN +S TP L Sbjct: 189 YSRRNIATGEIYETPQFAYMGMAMAMLSQPNWTILDAIDLYNAMSLHKINVPTPPLVGLR 248 Query: 712008 THRSQLSSCYLTTVADDLDGIYEALKENALLSKFAGGLGNDW-TRVRALGSHIKGTNGKS 712184 + +SC L D LD I A E+ + A G + R++ ++ Sbjct: 249 SSDRGFASCCLVDSTDTLDSIDTA--EHIVFKMVAARAGIGYHLESRSIADPVRNGAFPH 306 Query: 712185 QGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNT 712364 G +P+ + + D +V N R G+ + +I + +++++ D + M+ Sbjct: 307 SGKLPYYRHI-DRSVKANTQQTRGGSATVSYPYFDPEIIQLMQVKQQRATDENKIDKMDY 365 Query: 712365 ANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKF----GAEFEAAYTAYEDKVAR------ 712514 + +L +KR ++ D TL S P++H+ F A+FE Y A E +VA Sbjct: 366 SLSFNNLLLKRYLKNEDITLMSYFYAPEVHEAFYSDDEAKFEEIYVAAEKRVASLTKIDH 425 Query: 712515 --GEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEIT 712688 + K+ A ++ L + ETG + N + + +NLC EIT Sbjct: 426 EGKTVPAAPKVSAKEILDTWLRIRMETGRMYAHHIGESNRHG--NFLDPIRMTNLCVEIT 483 Query: 712689 LNTSD----------------------SEIAVCNLGSVNLVAHLVKQADGSFALDHDKLK 712802 T E+++CNLG V ++ + A+ + Sbjct: 484 QPTRPFHHITELYKTKEQLDQMKPEDIGEVSLCNLGGV-VLGRMESLAEW---------E 533 Query: 712803 RTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVAF 712982 +T + ++ +D +I+I Y + K R VG+G+M + Y A + Sbjct: 534 KTCYILLKFVDTIIEIQDYPFPTMEYTAKKRRNVGIGLMNAAGAMAAEGLAYEGIEARNW 593 Query: 712983 ADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTS 713162 R E + Y+ + AS LA+E+G + + +GIL DT K + V Sbjct: 594 IHREAEKLSYFLHKASVRLAKEQGACEWFNRTKPSKGILVIDTYKKTVDEL-----VSVG 648 Query: 713163 ESLDWTSLRSRIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTV 713342 +DW SLR+ I +GMRNS A P + S ++GV+ IEP + + +K + + Sbjct: 649 LEMDWESLRADILKYGMRNSVLTAQMPGESSSVLLGVTNSIEPPRKIVSIKGSAVNKVIA 708 Query: 713343 VNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAAS 713522 + W+ +M Y A++VD ++ + Sbjct: 709 IAPGATD-------WETLM-----------------------SYKLAYDVDRIEWIKWVA 738 Query: 713523 RRQKWIDQAQSLNIY 713567 QK+ Q+ S N+Y Sbjct: 739 TMQKFFSQSISTNMY 753 >ref|NP_899371.1|GTP cyclohydrolase I family protein Length = 302 Score = 139 bits (349), Expect = 2e-30 Identities = 96/261 (36%), Positives = 136/261 (52%), Gaps = 15/261 (5%) Frame = +3 Query: 3354147 LLFPIPRAGAREQLGITSALPFFGTDIWNAYELSWLNARGKPQIAVATFYVPAESPNIVE 3354326 LL PIPR R GIT+ F G D W+ +E+S L +G P +A P++SPNIVE Sbjct: 35 LLVPIPRELNRTDYGITNE-DFAGFDTWHGFEVSALTEQGLPVSGMAKVVYPSDSPNIVE 93 Query: 3354327 SKSFKLYLGSF-----AQTTFDSIDAVRDTLKRDVSAACGATVSV-----QLVSPHDF-G 3354473 SKS KLY SF A T + DA+ RD+S GA V V +L PH G Sbjct: 94 SKSMKLYWNSFNMAKVAATRAEVKDAIEAIASRDLSEVIGAPVQVSFFTEKLTQPHGMTG 153 Query: 3354474 KLEMEEXXXXXXXXXXXXXXVYEPDPSLLKAAEDEAPVEETLV-SDLLRSNCPVTGQPDW 3354650 E+++ V++ + E+ +++ V + LRSNC VT QPD+ Sbjct: 154 FAELDKYVSEST--------VFDSESGADADLLQESHIKKLKVFTPNLRSNCRVTHQPDF 205 Query: 3354651 GSVQIHYVG---PQIDHAGLLRYIISFRNHTGFHEQCVERIFLDILHACKPVKLAVYARY 3354821 G + ++ G P +D L++YI+SFR FHE+CVE I+ +L P +L V A Y Sbjct: 206 GDLYVYMSGEKTPTVD--SLMQYIVSFRKENHFHEECVEMIYKALLDKFDPTELMVTALY 263 Query: 3354822 TRRGGLDINPFRTNYNQPMPD 3354884 TRRGG +I P R + + +P+ Sbjct: 264 TRRGGWNICPARATHEELLPE 284 >ref|YP_006536.1|HrdC Length = 301 Score = 138 bits (347), Expect = 3e-30 Identities = 87/297 (29%), Positives = 164/297 (55%), Gaps = 3/297 (1%) Frame = +2 Query: 2391365 FKNLQLHRLPAPWAVTPDQMEKWLAPHAFQPGSSVEMQSHGWASPRDDGALVYSI--NRQ 2391538 +KN+ +++L +T + +K + F P S +M G+ SP D + V ++ N Sbjct: 5 WKNITIYKLSREADLTDLEDKKKMI--LFTPCGSQDMAKFGFVSPFGDNSEVIAMHGNGF 62 Query: 2391539 MLLTFRAEKKLLPASVVNQVTKERALEVEEQQGFKVGRKQMRELKEQVTDELLPRAFTIR 2391718 +L+ + E K+LP V+ + +E+ ++E++Q K+ + + LK++V LLPRAF+ Sbjct: 63 ILVEAKRETKILPPPVIQRAIQEKIEKLEQEQARKLKKTEKDSLKDEVLHSLLPRAFSKF 122 Query: 2391719 RDTRVWIDTVNGWLVIDAASQAVADDVRGLLVKSIDQLPLAGVQVAHSPVAAMTDWLLSG 2391898 + D + I+A+++ A+D+ L+ KS+ LP+ + V + +TDW+ G Sbjct: 123 SVIQAIYDGSTKRIYINASARQ-AEDMLALMRKSLGSLPVVPLSVENPIELTLTDWVRDG 181 Query: 2391899 EAPGGFTVDQDAELRSSGEGGATVRYVGHALEANDMRRHIEAGKQCMRLAMTWDNRISFV 2392078 AP GF + AEL++ E G R L ++++ H+EAGK +LA+ W RI F Sbjct: 182 SAPQGFQMGDAAELKAVLEDGGIARVKKQDLGSDEISTHLEAGKLVTKLALDWQKRIKFT 241 Query: 2392079 LTPSLTIKRVTPLD-VIKEAADPTAQNDAERFDSDVTLMTGELGRMLTSLIDILGGE 2392246 L + ++ V D ++++ +D +++ A+R D+D L+T E+ ++ +L++ LGGE Sbjct: 242 LDHNFSLTSVKFADELLEQNSDIDSEDVAQRLDADFFLLTSEISCLVDALVNALGGE 298 >ref|NP_899279.1|dTMP (thymidylate) synthase Length = 300 Score = 137 bits (344), Expect = 7e-30 Identities = 103/297 (34%), Positives = 144/297 (48%), Gaps = 15/297 (5%) Frame = +2 Query: 1279130 MKQYLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELV 1279309 MK YL L IL+ G + ENRTG T+S+ LR+DL +GFP +TTKK+A K+ GEL+ Sbjct: 2 MKNYLQLCTEILNEGDFLENRTGTNTVSVISRELRWDLSKGFPLLTTKKMATKAIFGELL 61 Query: 1279310 GFLRASRSAADFRAL------GCKVWDANANE-NAQWLANPYRQGVDDLGDVYGVQWRQW 1279468 FL S +D R +W N +E N + + DDLG VYG WR Sbjct: 62 WFLSGSGLISDLRKYTELSDEDFCIWQQNLDELNERAKKAGIVRNEDDLGYVYGKVWR-- 119 Query: 1279469 PGYKVLDAGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENP---A 1279639 K L AD + VT FD+ I QL + + E+P A Sbjct: 120 ---KRLSVTADKE-----------VTEFDQ-----------IHQLLCDIAAVKEDPTQSA 154 Query: 1279640 DRRILFHAWNPAVLDQ-----IALPACHLLYQFLPNATKREISLCLYIRSNDVGLGTPFN 1279804 RR++ AW+P + +ALP CH Y F +ISL RS D LG PFN Sbjct: 155 QRRMIVEAWDPYFHTESNSVDVALPPCH--YGFQVFVRNGKISLKWNQRSVDTFLGLPFN 212 Query: 1279805 LTEGAALLELVGRLTGYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAE 1279975 + A L+ ++ +LTG + GD HIYE+ + + +QL R P + P++++ E Sbjct: 213 IASYALLVHILAQLTGLKVGELIFSGGDVHIYEDHIVQVLKQLRRTPRELPQIQLPE 269 >ref|YP_006485.1|Ssb Length = 162 Score = 136 bits (343), Expect = 9e-30 Identities = 62/108 (57%), Positives = 82/108 (75%), Gaps = 3/108 (2%) Frame = -1 Query: 3396216 VNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGDFKEMTEWHRVAFFGRLA 3396037 VNKVIL+G LG DPE+RY+P+G AV + +AT + ++DK +G KE TEWH+V FG+LA Sbjct: 6 VNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTEWHKVVLFGKLA 65 Query: 3396036 EIVSEYLKKGSSVYIEGRIRTRKWQGQDGQDRYSTEIVADQ---MQML 3395902 EI SEYL+KGS VYIEG+++TRKW G +RY+TEI+ Q MQM+ Sbjct: 66 EIASEYLRKGSQVYIEGKLKTRKWTDDAGVERYTTEIIVSQGGTMQMI 113 >ref|NP_945089.1|gp58 Length = 297 Score = 133 bits (334), Expect = 1e-28 Identities = 98/299 (32%), Positives = 137/299 (45%), Gaps = 7/299 (2%) Frame = +2 Query: 3537161 MDLRQLPALNAIRAFEAAARHENFSRAADELYVTHGAVSHQVRALEEELGVQLFTRNGKR 3537340 M ++ LP L + F+AAARH NF+RAA+EL V GAVS QV LE LG LF R+ K Sbjct: 1 MKIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKA 60 Query: 3537341 LCLTDAGMRYAQQIRTALMVIADATRDVRASDRDRRLVVSMLSSFAARFITPRIGTFIER 3537520 L LT AG +YA ++ L +AT V L ++ S A F+ RI F Sbjct: 61 LHLTRAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAE 120 Query: 3537521 HPEIDVELQSTNSLTDFARDDVDIAIRFGQG-NYPGLHVEPLFDEVFFPACAPT-LNGGK 3537694 HPE+ V + + + + DI + + + PG+ + E CAPT L G + Sbjct: 121 HPEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRR 180 Query: 3537695 LPQTPADLAHYNLLRSDDEL-----WRPWFDAAGLKTLTEPKRGILYQDSSNLLLAAIDG 3537859 +P P DL LL ++++ WR WF + P R I LL A+ G Sbjct: 181 VP--PQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHG 238 Query: 3537860 QGIALVRRSLAVHDLLDGRIVRLFDIDGPSPWHYFFVCPPPLLNTPRVQAFRTWLLQEV 3538036 G L + + + G++V D Y + P +TP V FR WLL V Sbjct: 239 HGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLLTHV 297 Score = 111 bits (278), Expect = 3e-22 Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 11/295 (3%) Frame = -2 Query: 625679 LPPLNALRAFEAAARHLSVKAAAEELSVTPGAVSQMIRTLETHLGVQLFERVNRGILLTA 625500 LPPL L F+AAARH + AAEEL+V GAVS+ + LET LG LF R + + LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 625499 AGRDYLPPVRNAFRQIADASQRVSGAADSGVLTVSVTPFFASAWLVPRLAQFREACPDVD 625320 AG+ Y V +A+ V LT++ A+ +L R+A+F P+V Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 625319 LQVVTSHALADFSRDGVDVAIRHGLGRYI------GLCSERLLTVEIVALASPELVARLG 625158 ++++ + + + D+ + YI G+ ++ ++ A +P +A G Sbjct: 126 VRILVREGVFNLNAAEFDIGV-----YYIRDVPPPGIAGTAIVAEDVHAYCAPTFLA--G 178 Query: 625157 MPATPADLVGWPQLHDAERK----GWHIWFGAQRID-DFGPPRGPAFDDSGLLLQAIVAG 624993 P DL+ L E++ GW WF + F P R + + +LLQ + G Sbjct: 179 RRVPPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHG 238 Query: 624992 QGAGLLPAAMVRGELASGRLVQLADVAWLDDFAYYLVYPPHHAERPKVAAFRRWI 624828 GA L M+ + SG+LV +D AY +++P + P V FR W+ Sbjct: 239 HGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 109 bits (273), Expect = 1e-21 Identities = 88/295 (29%), Positives = 131/295 (44%), Gaps = 11/295 (3%) Frame = +1 Query: 3669460 LPPFSALRAFEAAARHESFSAAGDELHVTHGAISRQIAGFEAWLGKPVFHRYGKRVKLTD 3669639 LPP L F+AAARH +F+ A +EL+V GA+S+Q+ E +LG +F R K + LT Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 3669640 EGRRYLDTVRAAFDSIALATEQLRNTGAARVLRINALPTFAMKWLLPRLSRFQRDVPNVE 3669819 G++Y D V A AT + L I A +L R++ F + P V Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 3669820 LKLSTSNAPLD-TLDGFDVA---IRRGPGHWPNCTSGHFLDESVIPVCSPALL--KRMPI 3669981 +++ + FD+ IR P P + E V C+P L +R+P Sbjct: 126 VRILVREGVFNLNAAEFDIGVYYIRDVPP--PGIAGTAIVAEDVHAYCAPTFLAGRRVP- 182 Query: 3669982 ARADDLARHVLLHSDTRPE---GWRDWF--AAAGVTMKGRKRQSFDHFYLALQAAVDGLG 3670146 DL LL ++ + GWRDWF + + + S + + + LQ A+ G G Sbjct: 183 --PQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHG 240 Query: 3670147 VALGPLPLIDDELASGRLVMPLEGPRIATRSYWWIAPRAPADDPLVAQFCAWLQT 3670311 LG +I + SG+LV+ + +Y I P D P V F WL T Sbjct: 241 AILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLLT 295 Score = 99.0 bits (245), Expect = 2e-18 Identities = 83/296 (28%), Positives = 129/296 (43%), Gaps = 8/296 (2%) Frame = +1 Query: 2718757 LPSLDLVRGFVAVGRRMSITLAAQDLCVTQSAVSRQVHALEAHLGVALLQRGYRKIAFTP 2718936 LP L + F A R + T AA++L V Q AVS+QV LE LG L R + + T Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 2718937 EGERLFRVADAALHGLQDTVASLAAARERQPVTITASIGVTALWLLPRLGRLQARLPEID 2719116 G++ A L + A + + +TI + G L+L R+ A PE+ Sbjct: 66 AGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 2719117 LRVAANDKVLDLRAEGIDLGIRYCPRDRAP---AGALRLFDEIVVPVAHPALAARPVTNA 2719287 +R+ + V +L A D+G+ Y RD P AG + +++ A LA R V Sbjct: 126 VRILVREGVFNLNAAEFDIGVYYI-RDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP-P 183 Query: 2719288 AAIADHVLLEFDGPPQPQLQWRAHLH-AAGLGDARPKGVLRFNQYDQVIQAAIAGQGVAL 2719464 + + LL + + + WR G RP + N Y ++Q A+ G G L Sbjct: 184 QDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAIL 243 Query: 2719465 GRLALVAPMLADGRLAVLGPHTQALSDAYG-YWLFQHDPAPRREVADV---RDWML 2719620 G ++ P++ G+L + + AY W PA RR+ V R+W+L Sbjct: 244 GWKHMITPLVESGKLVLASDAHASFGGAYQVIW-----PADRRDTPAVTMFREWLL 294 Score = 88.2 bits (217), Expect = 4e-15 Identities = 85/304 (27%), Positives = 126/304 (41%), Gaps = 8/304 (2%) Frame = -3 Query: 2474212 PGTRALRTFDAAARHLNFSRAADEVGLTPAAVSHQIKEIEARLDMDLFVRTSRSIRLTPX 2474033 P + L FDAAARH NF+RAA+E+ + AVS Q+ ++E L LFVR ++++ LT Sbjct: 7 PPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLT-- 64 Query: 2474032 XXXXXXXXXXXXXGMQXXXXXXXXXXREQT--ELRVSVGARFATHWLLPRLPRFRAAHPA 2473859 + +EQT L ++ + AT +L R+ F A HP Sbjct: 65 -RAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPE 123 Query: 2473858 FELSXXXXXXXXXXXXXXXXXXXXFGTGRYRDVCAQHLFDTSVV-----AVCSPALLSAG 2473694 + G RDV + T++V A C+P L AG Sbjct: 124 VSV----RILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFL-AG 178 Query: 2473693 PPLRKPRDLLRYTLCHADCEVDGVTWPRWSAWM-AAAGVDGFDDSRCVAFPDSSHVVQAV 2473517 + P+DL+ TL A E W W W G GF +R ++ ++Q Sbjct: 179 RRV-PPQDLMEATLLVA--EEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLA 235 Query: 2473516 TDGTAVGLAEPHMIARDLAEGRVVPLFDVNVEVAPGLAYHVVYPARTQDDPRIVALCDWL 2473337 G L HMI + G++V D + G AY V++PA +D P + +WL Sbjct: 236 LHGHGAILGWKHMITPLVESGKLVLASDAHASF--GGAYQVIWPADRRDTPAVTMFREWL 293 Query: 2473336 ADEV 2473325 V Sbjct: 294 LTHV 297 Score = 86.7 bits (213), Expect = 1e-14 Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 6/295 (2%) Frame = -1 Query: 2589927 PFTDISTFVRAAEAGNFTRAARLLQLSPSAVSKAVARLEAELGVRLFHRSPRQITLTGDG 2589748 P + F AA GNFTRAA L ++ AVSK V +LE LG LF R + + LT G Sbjct: 8 PLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAG 67 Query: 2589747 ELFFAVCRQGMTDIADARSRLAGASQPWRGKMRLCVPVSFGQYVLAPALGDWLGAHPGLD 2589568 + + + D +A + + P + + LA + ++ HP + Sbjct: 68 QQYADRVHAILADCVEATALVMKEQTP--HSLTIACASGTATLFLADRIAEFSAEHPEVS 125 Query: 2589567 IELALTDRHVDMTAERFDLAV-MLGEVPDSRLVARPLPAHRFVTVASPAYLQSRGVPDTP 2589391 + + + + ++ A FD+ V + +VP + + A +P +L R VP P Sbjct: 126 VRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP--P 183 Query: 2589390 DDLVNHTCLRYVMVNSGQFRDWM-----FVRGGDQYSHFPVGPLASDHVSALLALSEAGG 2589226 DL+ T ++V Q R WM F + P ++++ LL L+ G Sbjct: 184 QDLMEAT----LLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGH 239 Query: 2589225 GILQAPHYVVAPSLAAGRLVPVLSDFKSIGAPLSVVYEKARQASARTRLAADFLL 2589061 G + +++ P + +G+LV S G V++ R+ + + ++LL Sbjct: 240 GAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLL 294 Score = 84.7 bits (208), Expect = 4e-14 Identities = 81/297 (27%), Positives = 122/297 (41%), Gaps = 7/297 (2%) Frame = +2 Query: 3615542 LPPLQTLRAFETAVRLQSFTRAADELALTQGAVSQHIRALEAQLGYPLFTRERNGXXXXX 3615721 LPPLQ L F+ A R +FTRAA+EL + QGAVS+ + LE LG LF R+ Sbjct: 6 LPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTR 65 Query: 3615722 XXXXXXXQVRQGLSVLERAFEPALSVRSRPRTGDVTLNVSVLPSVAERWLAPRLPRFSXX 3615901 +V ++L E V +T ++ A +LA R+ FS Sbjct: 66 AGQQYADRVH---AILADCVEATALVMKEQTPHSLT--IACASGTATLFLADRIAEFSAE 120 Query: 3615902 XXXXXXXXXXDVALAPLRKRDRIDVALRY-GPGTWPGVVAEKLMNETIFPVASPTYRNRD 3616078 + L + D+ + Y PG+ ++ E + +PT+ Sbjct: 121 HPEVSVRILVREGVFNLNAAE-FDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGR 179 Query: 3616079 GVAPRAPADLVRATLL--RHPAQPWEPWLQAARLDLTE-SARAPRFTDANA---LIDATL 3616240 V P+ DL+ ATLL + W W RL + E R R AN+ L+ L Sbjct: 180 RVPPQ---DLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLAL 236 Query: 3616241 KGRGVALARRSLIEPELANGTLVRVSTVRVTDVYAHYVVWRPGHPHEAAIRTWLDWL 3616411 G G L + +I P + +G LV S + A+ V+W A+ + +WL Sbjct: 237 HGHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 69.3 bits (168), Expect = 2e-09 Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 2/187 (1%) Frame = -2 Query: 3073760 CLMAFDSRLLSGIGVLSAVIEAGTFARAGEAMGLTQPAVSRAVARLEERVGIRIFNRTAR 3073581 CL+ FD A G F RA E + + Q AVS+ V +LE +G +F R A+ Sbjct: 11 CLVFFD-----------AAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAK 59 Query: 3073580 AITLTDEGRRFYEAVAPLLAGIEDAAIDAGQSKARVRGRLRVNVDATFGHYVLAPKMAEF 3073401 A+ LT G+++ + V +LA +A A K + L + + LA ++AEF Sbjct: 60 ALHLTRAGQQYADRVHAILADCVEAT--ALVMKEQTPHSLTIACASGTATLFLADRIAEF 117 Query: 3073400 LDRFPDLSVEISVRDRMGDLVADGFDVAVRF--GIPEPSSYRARLLLETRVLTCASAAYV 3073227 P++SV I VR+ + +L A FD+ V + +P P ++ E CA Sbjct: 118 SAEHPEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLA 177 Query: 3073226 ARHGEPR 3073206 R P+ Sbjct: 178 GRRVPPQ 184 Score = 65.5 bits (158), Expect = 3e-08 Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 1/183 (0%) Frame = -3 Query: 1897936 MQRVPSLKLLTGFEAAARLGNFSRAADELHLSQSAISHQIQQLEAQLGQPLFRRRGRGVE 1897757 +Q +P L+ L F+AAAR GNF+RAA+EL+++Q A+S Q+ +LE LG LF R + + Sbjct: 3 IQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALH 62 Query: 1897756 LTIAGEVLQRSVQRAMDTLRGGLDRIATYLNPGLVVLVCPAPLLHGWLQPRLEQLQQVLP 1897577 LT AG+ V + + P + + C + +L R+ + P Sbjct: 63 LTRAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHP 122 Query: 1897576 DLCPLLSTDETARYVDEIDVDMTI-GTRPMLQPGLLDIPFMRDEWVTVCATPLAEQLERV 1897400 ++ + E ++ + D+ + R + PG+ + ++ CA Sbjct: 123 EVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP 182 Query: 1897399 PRD 1897391 P+D Sbjct: 183 PQD 185 Score = 65.1 bits (157), Expect = 3e-08 Identities = 40/145 (27%), Positives = 71/145 (48%) Frame = -2 Query: 980402 QAMNQIQTMRVFVCVAEQQSFRRAAHHLGVSNALVTRSIAMLEGHLNTRLIHRTTRNLSL 980223 Q + +Q + F A +F RAA L V+ V++ + LE L T L R + L L Sbjct: 4 QPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHL 63 Query: 980222 TEAGVRYLDGCRALLEEFDHLESSVAHAVREPAGTLRVVASGLLSPLALTPLVSSFRHRY 980043 T AG +Y D A+L D +E++ + +L + + + L L ++ F + Sbjct: 64 TRAGQQYADRVHAILA--DCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEH 121 Query: 980042 PELRVQLTVAEGPLDVLDSGYDVGI 979968 PE+ V++ V EG ++ + +D+G+ Sbjct: 122 PEVSVRILVREGVFNLNAAEFDIGV 146 Score = 64.7 bits (156), Expect = 4e-08 Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 5/158 (3%) Frame = +3 Query: 2019855 LQSLRVFALVAEHGSLTKAAEHGQLTLSAVSKRIAELESVTGSALFVRHARGVELTPAGR 2020034 LQ L F A HG+ T+AAE + AVSK++ +LE+ G+ LFVR A+ + LT AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 2020035 ALLD--HA--AKVIEQVNRMAHEMSDYVAGVRGHIHVWTNTSAIVQFLPADLAAFLTDNP 2020202 D HA A +E + E + + + + + FL +A F ++P Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPH------SLTIACASGTATLFLADRIAEFSAEHP 122 Query: 2020203 GIKVSLEERLSHEIVDALASGKADLGV-FADNVPAPGI 2020313 + V + L E V L + + D+GV + +VP PGI Sbjct: 123 EVSVRI---LVREGVFNLNAAEFDIGVYYIRDVPPPGI 157 Score = 62.8 bits (151), Expect = 2e-07 Identities = 44/153 (28%), Positives = 77/153 (50%) Frame = -1 Query: 3588177 LRQLKYFVATAELGQISQAAIQLTISQSAVTSAIKELEDSLGTQLFLRTPSGVTLTDTGR 3587998 L+ L +F A A G ++AA +L ++Q AV+ + +LE LGT LF+R + LT G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 3587997 RFLNHAYTILSSVDEAMRIPNLESTLTGTLAIAASYTVLGYFLPHHVLRLNTLYPRLTIH 3587818 ++ + + IL+ EA + E T +L IA + FL + + +P +++ Sbjct: 69 QYADRVHAILADCVEATALVMKEQT-PHSLTIACASGTATLFLADRIAEFSAEHPEVSVR 127 Query: 3587817 LHELNRESIEEGLIAGRYDMAVLLTSNVSNPAL 3587719 + L RE + L A +D+ V +V P + Sbjct: 128 I--LVREGV-FNLNAAEFDIGVYYIRDVPPPGI 157 Score = 62.0 bits (149), Expect = 3e-07 Identities = 67/288 (23%), Positives = 115/288 (39%), Gaps = 4/288 (1%) Frame = +3 Query: 2072883 FVQAADTRSFVAAGRVLGISASGIGKSVTRLEQSLGVRLFHRSTRSVALTTEGALFLERA 2073062 F AA +F A L ++ + K V +LE LG LF R +++ LT G + +R Sbjct: 15 FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRV 74 Query: 2073063 RRILAEFDAAQAELSEASSVPRGRLRIGLPMVGDPFLPV-FSAFRQRYPEIELDLDFDNR 2073239 ILA+ A A L P FL + F +PE+ + + Sbjct: 75 HAILADCVEATA-LVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVREG 133 Query: 2073240 MADIIEEGYD-AVVRSGDVDDSRLTARPLGRFRMMLVGAPDYFARRGTPSHPRELVEHDC 2073416 + ++ +D V DV + + + AP + A R P P++L+E Sbjct: 134 VFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP--PQDLMEATL 191 Query: 2073417 IQFRMPNTGKLQTWQ--LRCDAGDEPELRLPTAITCNTNEARMYFAITGVGIAYASEFSA 2073590 + + W+ R G E R I+ N+ + A+ G G + Sbjct: 192 LVAEEQQR-QWMGWRDWFRLTVG-EIGFRPARTISANSYPVLLQLALHGHGAILGWKHMI 249 Query: 2073591 KQALEAGQLVTVLDDYTAEQNTFQLLWPSGRHVTPRLRAFIDFVSEHV 2073734 +E+G+LV D + + +Q++WP+ R TP + F +++ HV Sbjct: 250 TPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLLTHV 297 Score = 61.2 bits (147), Expect = 5e-07 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 1/128 (0%) Frame = -2 Query: 1515350 LAMRPLPP-ELLRSFVAVAQSGSFTAASERVSLSQSTVSQHIRRLEELLDRPLFERDTRN 1515174 + ++PLPP + L F A A+ G+FT A+E ++++Q VS+ + +LE L LF RD + Sbjct: 1 MKIQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKA 60 Query: 1515173 VHLSQHGDALFRYAVRILELMDEAVTSVCGPPLSGKVRLAMSEDFASAHLTAALASFVQR 1514994 +HL++ G IL EA V + +A + A+ L +A F Sbjct: 61 LHLTRAGQQYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAE 120 Query: 1514993 NPEVELAI 1514970 +PEV + I Sbjct: 121 HPEVSVRI 128 Score = 61.2 bits (147), Expect = 5e-07 Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 5/263 (1%) Frame = -3 Query: 1655650 MQHLPDLEAWAIFARVAETGSFAKAADLLGVSQPTVSKAIARLEKRLGAMLLYRTSRKLS 1655471 +Q LP L+ F A G+F +AA+ L V+Q VSK + +LE LG L R ++ L Sbjct: 3 IQPLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALH 62 Query: 1655470 LTPTGXXXXXXXXXXXXXXXXXESEASAQALE---PHGLVRVNAPMSFGLRHLSPVLPAF 1655300 LT G EA+A ++ PH L A + L L+ + F Sbjct: 63 LTRAGQQYADRVHAILADCV----EATALVMKEQTPHSLTIACASGTATL-FLADRIAEF 117 Query: 1655299 LERYPRVDIDLVLTDHIVDIVSGGFDVAI-RIAEXXXXXXXXXXLCAVRRPLVASPAYLD 1655123 +P V + +++ + + ++ + FD+ + I + + A +P +L Sbjct: 118 SAEHPEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFL- 176 Query: 1655122 RRGRPTHPRDIEQHVCLTYTNLPTP-EHWRFRQPASGDEVGVSVHGRIRTNNADVIVPAL 1654946 GR P+D+ + L WR + E+G I N+ V++ Sbjct: 177 -AGRRVPPQDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLA 235 Query: 1654945 IAGHGLALQPEFLVWEAMQNGEL 1654877 + GHG L + ++ +++G+L Sbjct: 236 LHGHGAILGWKHMITPLVESGKL 258 Score = 61.2 bits (147), Expect = 5e-07 Identities = 40/121 (33%), Positives = 59/121 (48%) Frame = +3 Query: 1867380 LRYFVEVARTGSISDASARLHVAVSAISRQIAKLESELGAPLFERRPRGMALSEAGERLL 1867559 L +F AR G+ + A+ L+VA A+S+Q+ KLE+ LG LF R + + L+ AG++ Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 1867560 AFAQRSLLEAEHVMKDIGGLDALHGSLLKIACSEGFAIDFLPGTLASFKARHPGVDFSVW 1867739 L + + H L IAC+ G A FL +A F A HP V + Sbjct: 72 DRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Query: 1867740 V 1867742 V Sbjct: 130 V 130 Score = 60.5 bits (145), Expect = 8e-07 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 2/139 (1%) Frame = -3 Query: 1621015 FVTVAQAGNFTRAAARLHLSQPALTVQIRRLEEIVGARLFDRNSRSVALTQTGRELLPLL 1620836 F A+ GNFTRAA L+++Q A++ Q+ +LE +G LF R+++++ LT+ G++ + Sbjct: 15 FDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRV 74 Query: 1620835 QRSLDDMERVLRDARALGEGTSGTVRLACLPTFASSVLPELIQSFRRDVPRAGFEI--RD 1620662 L D V A + E T ++ +AC A+ L + I F + P I R+ Sbjct: 75 HAILADC--VEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVRE 132 Query: 1620661 GVASLVTALVRNEEADLGL 1620605 GV +L A E D+G+ Sbjct: 133 GVFNLNAA-----EFDIGV 146 Score = 58.9 bits (141), Expect = 2e-06 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 3/182 (1%) Frame = +1 Query: 2475760 PMDRFDAMQAFARVVEAGSFTKAAETLHMSRTTVTQLVQQLEARLRVKLFNRTTRKVVVT 2475939 P+ + F G+FT+AAE L++++ V++ V +LE L LF R + + +T Sbjct: 5 PLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLT 64 Query: 2475940 ADGAAYYDRVVRLLADMDDAETSLSAASASPRGRLRVDVPSPFARLILIPALPAFHARYP 2476119 G Y DRV +LAD +A T+L +P L + S A L L + F A +P Sbjct: 65 RAGQQYADRVHAILADCVEA-TALVMKEQTPHS-LTIACASGTATLFLADRIAEFSAEHP 122 Query: 2476120 DIQLDMGVSDRVVDVIGENVDC---VMRGGEPTDRALVARRVGDLRLGVYASPAYLARAG 2476290 ++ + + V + V ++ D +R P A A D+ Y +P +LA Sbjct: 123 EVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVH--AYCAPTFLAGRR 180 Query: 2476291 MP 2476296 +P Sbjct: 181 VP 182 Score = 58.2 bits (139), Expect = 4e-06 Identities = 39/140 (27%), Positives = 63/140 (45%) Frame = +2 Query: 2031824 IDAMKVFVATLDEGSLAGAGRKLGRSPAAVSRAIAFLEEHTGTALLYRTTRTIRLSEAGE 2032003 + + F A G+ A +L + AVS+ + LE GT L R + + L+ AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 2032004 RYAAACRRILSDLEEADMLVADERSAPRGLLTVTAPVAAGEDVLRALLDEFIERHPAVSI 2032183 +YA IL+D EA LV E++ LT+ L + EF HP VS+ Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 2032184 RLQLLDRPVSLIDEGMDVAL 2032243 R+ + + +L D+ + Sbjct: 127 RILVREGVFNLNAAEFDIGV 146 Score = 57.0 bits (136), Expect = 9e-06 Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 5/265 (1%) Frame = +3 Query: 3191088 IGKRIARLEARLNVRLFHRSTRSITLTAEGTRFLERCRRVLAELDAAEQELTHSAEAPRG 3191267 + K++ +LE L LF R +++ LT G ++ +R +LA+ A L + P Sbjct: 38 VSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILADCVEATA-LVMKEQTPHS 96 Query: 3191268 RLRVSLPTIGTLLLPV-LADFMAAYPEIELDIDFSDRLVDVVDEGFD-AVLRTGQPSDSR 3191441 TL L +A+F A +PE+ + I + + ++ FD V Sbjct: 97 LTIACASGTATLFLADRIAEFSAEHPEVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPG 156 Query: 3191442 LSSRLLGHFRQHLVASPDYLDRHGTPRTPADLTQHRCL---HYRFPTSGKLETWPLRVPR 3191612 ++ + H +P +L P P DL + L + G + + L V Sbjct: 157 IAGTAIVAEDVHAYCAPTFLAGRRVP--PQDLMEATLLVAEEQQRQWMGWRDWFRLTVGE 214 Query: 3191613 AGTLPEVPVAMVSNSAEARLCFALRGLGIACLPIFFVRDALEDGTLRAVLDEHIASCTPI 3191792 G P ++ +NS L AL G G + +E G L D H + Sbjct: 215 IGFRPARTIS--ANSYPVLLQLALHGHGAILGWKHMITPLVESGKLVLASDAHASFGGAY 272 Query: 3191793 YVLWPSGRHPTPKLRAFVDYMAAHL 3191867 V+WP+ R TP + F +++ H+ Sbjct: 273 QVIWPADRRDTPAVTMFREWLLTHV 297 Score = 56.6 bits (135), Expect = 1e-05 Identities = 40/122 (32%), Positives = 61/122 (50%) Frame = +3 Query: 766722 LRHIRYFLAVAEQRSFTRAADALHVSQPTLSQQVRQLEESLGVQLFDRSGRTVQLTEFGE 766901 L+ + +F A A +FTRAA+ L+V+Q +S+QV +LE LG LF R + + LT G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 766902 VYARHARAALHELDTGQRALHDVADLGSGSLRLAMMPTFAAYLSGSLIDAFHADYPNVAL 767081 YA A L D + + + SL +A A I F A++P V++ Sbjct: 69 QYADRVHAIL--ADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 767082 SI 767087 I Sbjct: 127 RI 128 Score = 55.5 bits (132), Expect = 3e-05 Identities = 36/131 (27%), Positives = 56/131 (42%) Frame = -1 Query: 1618824 AVAREGTFAAAGNRIGLTQAAVSAQMQRLEAELGFALFDRQGRSARLNEMGHHVLDQAQA 1618645 A AR G F A + + Q AVS Q+ +LE LG LF R ++ L G D+ A Sbjct: 17 AAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHA 76 Query: 1618644 LIGLYENLSSTAPGSPATARVTIGAIASVQSALLPAALADFHRRHPACRTRVIPGLSIEL 1618465 ++ ++ +TI + + L +A+F HP R+ L E Sbjct: 77 ILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRI---LVREG 133 Query: 1618464 VNRVDAGEIDM 1618432 V ++A E D+ Sbjct: 134 VFNLNAAEFDI 144 Score = 54.7 bits (130), Expect = 4e-05 Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 1/189 (0%) Frame = +2 Query: 1723376 LQNMRVFVRVVDAGSFTAAAQQMNSTTAYASRAVSDLEAHXXXXXXXXXXXXXXXXEAGE 1723555 LQ + F G+FT AA+++N S+ V LE AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1723556 RYLQRCEQILAYVDQAEAEAGDAHARPSGKLKVHCFTSLGQHYLVPAIARYRERYPDVHV 1723735 +Y R ILA D EA A + L + C + +L IA + +P+V V Sbjct: 69 QYADRVHAILA--DCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1723736 ELTLAQRMPDLLDEGYDVAIVVGRDLPDSGLVSQRL-GESYSVVCASRNYVEAHGVPQRP 1723912 + + + + +L +D+ + RD+P G+ + E CA ++ VP P Sbjct: 127 RILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAP-TFLAGRRVP--P 183 Query: 1723913 ADLAQHVCL 1723939 DL + L Sbjct: 184 QDLMEATLL 192 Score = 53.1 bits (126), Expect = 1e-04 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 2/187 (1%) Frame = -1 Query: 2212236 PMTPDQ-LITFAAVAEHLNISHAAVALHLSQPAVSGQLRLLQDEFGEPLYQREGRGIRLT 2212060 P+ P Q L+ F A A H N + AA L+++Q AVS Q+ L+ G L+ R+ + + LT Sbjct: 5 PLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLT 64 Query: 2212059 PVGEQLAQYAKAQRDTFAQARAFRDAVRGLEAGTLRIGASTTPASYLLPYLIAAFQPSAP 2211880 G+Q A A +A A ++ +L I ++ A+ L IA F P Sbjct: 65 RAGQQYADRVHAILADCVEATAL--VMKEQTPHSLTIACASGTATLFLADRIAEFSAEHP 122 Query: 2211879 RVAIHTM-SGNTADVVAALPSLDIAMIEGPPGEALPPGTAVHAWREDEIVAIVPTGHPLA 2211703 V++ + ++ AA + + I P PPG A A +++ H Sbjct: 123 EVSVRILVREGVFNLNAAEFDIGVYYIRDVP----PPGIAGTAIVAEDV-------HAYC 171 Query: 2211702 APEYASG 2211682 AP + +G Sbjct: 172 APTFLAG 178 Score = 53.1 bits (126), Expect = 1e-04 Identities = 30/60 (50%), Positives = 36/60 (60%) Frame = -1 Query: 241743 LTLLRAFATVAREGNLTRAAVHLHLTQPAVSLQIKHLQETLGVTLFTRTSRGLALTRDGQ 241564 L L F AR GN TRAA L++ Q AVS Q+ L+ LG TLF R ++ L LTR GQ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Score = 52.8 bits (125), Expect = 2e-04 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 1/118 (0%) Frame = +3 Query: 3067401 EAVRQNFNLTEAAKALYTSQPGVSKAIIELEDELGVEIFTRHGKRVRSLTEPGRIILASV 3067580 +A ++ N T AA+ L +Q VSK +++LE LG +F R K + LT G+ V Sbjct: 16 DAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALH-LTRAGQQYADRV 74 Query: 3067581 ERILQE-VESLKRVGKDYAAQDQGNLTIAATHTQARYSLPAAIAEFKKRFPKVHLSIL 3067751 IL + VE+ V K+ Q +LTIA A L IAEF P+V + IL Sbjct: 75 HAILADCVEATALVMKE---QTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRIL 129 Score = 52.4 bits (124), Expect = 2e-04 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 4/148 (2%) Frame = -1 Query: 3627810 GSFVGAAERMQMSAAMASKHVMHLEQQLGARLLHRTTRRVAPTEAGREYYERLVQALSEL 3627631 G+F AAE + ++ SK V+ LE LG L R + + T AG++Y +R+ L++ Sbjct: 22 GNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILADC 81 Query: 3627630 DEAGQAVGAASVVPQGRLRVTSLSAFGLRHVMQAVTDYAGRFPDVTVDMTLSDRVVDLIE 3627451 EA A+ P L + S + + +++ P+V+V + + + V +L Sbjct: 82 VEA-TALVMKEQTPHS-LTIACASGTATLFLADRIAEFSAEHPEVSVRILVREGVFNLNA 139 Query: 3627450 EGYDVAV----RAAPNGLKSSSLVARQI 3627379 +D+ V P G+ +++VA + Sbjct: 140 AEFDIGVYYIRDVPPPGIAGTAIVAEDV 167 Score = 51.6 bits (122), Expect = 4e-04 Identities = 33/112 (29%), Positives = 56/112 (50%) Frame = +1 Query: 1492801 AQHLTFSRASVDVNLSQPALSRSIQSIEAELGVALFDRHPNGVSLTPYGKVFAERARRIV 1492980 A+H F+RA+ ++N++Q A+S+ + +E LG LF R + LT G+ +A+R I+ Sbjct: 19 ARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAIL 78 Query: 1492981 MEATELQRDLALMQHGEFGELSIGLGATPAILLTGPLMDHFLREAPQVRVSI 1493136 + E +M+ L+I + A L + F E P+V V I Sbjct: 79 ADCVE--ATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRI 128 Score = 51.2 bits (121), Expect = 5e-04 Identities = 57/225 (25%), Positives = 81/225 (36%), Gaps = 5/225 (2%) Frame = -1 Query: 1674513 LAALAIFRAVVRENGVTRAAAKLNRVQSNVTTRIKQLEEELGAALFVRDGRRLVLTPAGH 1674334 L L F A R TRAA +LN Q V+ ++ +LE LG LFVRD + L LT AG Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1674333 TLLPYXXXXXXXXXXXXXXXXXDTPRGRLRLGTMESTAASRLPTVLARYHDAWPDVSLEL 1674154 + L + TA L +A + P+VS+ + Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRI 128 Query: 1674153 LTGTTGWLIDRVRDFEIDAALFARPPAPDTLPDTFETVPVFRENL-VLLTPRGHPPVRTP 1673977 L G +F+I P P V L R P P Sbjct: 129 LV-REGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP----P 183 Query: 1673976 RDVILPTLIAFE----RGCTYRKYVEQWYAAHGVKPARVLELGSY 1673854 +D++ TL+ E + +R + G +PAR + SY Sbjct: 184 QDLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSY 228 Score = 50.8 bits (120), Expect = 6e-04 Identities = 63/292 (21%), Positives = 106/292 (36%), Gaps = 3/292 (1%) Frame = -2 Query: 104612 LQSMRVFVKVADLGSFARAASAMDISNAVATRHVADXXXXXXXXXXXXXXXXXXXXXXGQ 104433 LQ + F A G+F RAA ++++ ++ V GQ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 104432 VYLERARQILDELEDVEQMVVARNHEPVGTLRIVAPVVFGLHNLAPVLQSYTENFPKVVP 104253 Y +R IL + VE + + +L I LA + ++ P+V Sbjct: 69 QYADRVHAILADC--VEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 104252 DLTLVDRQVDLVEEGFDVGIVVTRQMRSASIVTRRLTTGCMTVCATPSYLEKHGVPTHPE 104073 + + + +L FD+G+ R + I + + P++L VP P+ Sbjct: 127 RILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVP--PQ 184 Query: 104072 HLAEHPSL---SLPTEYWGDERVFTGPDGEVRVRPTNVIVANNTAMLRQFALLGMGVAIL 103902 L E L ++ G F GE+ RP I AN+ +L Q AL G G + Sbjct: 185 DLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHGAILG 244 Query: 103901 PSYLIGSDIARGALVRLLPDFRLPQVEINIAYPSRRHLPAKVRTFIDHLVEH 103746 ++I + G LV + +P+ R V F + L+ H Sbjct: 245 WKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWLLTH 296 Score = 50.1 bits (118), Expect = 0.001 Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 4/266 (1%) Frame = -2 Query: 2566097 VAPAIIGRRLDALEERLGXXXXXXXXXXXXXTFEGSAFLEDCQRVINDMQNAEASVSAGG 2565918 VA + +++ LE LG T G + + ++ D A A V Sbjct: 33 VAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYADRVHAILADCVEATALVMKEQ 92 Query: 2565917 VKASGHLRISAPAGFGRRHVAPLVPEFSVGHPDVSVTLDLSDRMVDLVNEGFDCAV-RLG 2565741 S L I+ +G +A + EFS HP+VSV + + + + +L FD V + Sbjct: 93 TPHS--LTIACASGTATLFLADRIAEFSAEHPEVSVRILVREGVFNLNAAEFDIGVYYIR 150 Query: 2565740 ELPDSSLVSLKLGENRRVCVASPAYLA-RRGTPATLAEXXXXXXXXXXXXXNQQRGWAFQ 2565564 ++P + + +P +LA RR P L E R W F+ Sbjct: 151 DVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVPPQDLMEATLLVAEEQQRQWMGWRDW-FR 209 Query: 2565563 EDDKVVSIRVNGTMECSDGAVLHEWCLDGHG--LAWRSWWEVGDDIAAGRLVSVLDAFAA 2565390 + R T+ + VL + L GHG L W+ + + +G+LV DA A+ Sbjct: 210 LTVGEIGFRPARTISANSYPVLLQLALHGHGAILGWKHM--ITPLVESGKLVLASDAHAS 267 Query: 2565389 PPIGIHAVFPQRRHLPLRVRLFLDYL 2565312 ++P R V +F ++L Sbjct: 268 FGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 49.3 bits (116), Expect = 0.002 Identities = 64/273 (23%), Positives = 100/273 (36%), Gaps = 4/273 (1%) Frame = -2 Query: 1109111 LRQLRYFVKVVECGNVTHASEALHVAQPAVSQQMRNLEQDLGMQLLERSVRGVAPTAAGR 1108932 L+ L +F GN T A+E L+VAQ AVS+Q+ LE LG L R + + T AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1108931 TLYQHALELLRQADGTRELLRRDADTPQGRVTVGMPSSTARVLAIPLARAVRDRYPGIML 1108752 +L L+ ++ TP +T+ S TA + +P + + Sbjct: 69 QYADRVHAILADCVEATALVMKE-QTPHS-LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 1108751 ELIEAPSAXXXXXXXXXXXXLAIVVDAVDTRGIAIHRLLTETLYLITWPGFQVPGDPVPL 1108572 ++ + V GIA ++ E ++ P F P Sbjct: 127 RILVREGV--FNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYCAPTFLAGRRVPPQ 184 Query: 1108571 DAIAQMPLVLPSAPNTIRNRVDW---AMREAGLSYEISFEASSTGLLFAAVMAQLGVTIL 1108401 D + LV DW + E G + A+S +L + G IL Sbjct: 185 DLMEATLLVAEEQQRQWMGWRDWFRLTVGEIGFRPARTISANSYPVLLQLALHGHG-AIL 243 Query: 1108400 PWTAAHVE-IEERKLKLSTVAHRLFARDLSLCW 1108305 W +E KL L++ AH F + W Sbjct: 244 GWKHMITPLVESGKLVLASDAHASFGGAYQVIW 276 Score = 48.9 bits (115), Expect = 0.002 Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 3/180 (1%) Frame = +1 Query: 598738 LALFVDVVDQQSFSAAARRLGVAASSVTRRIDRLETQLGIRLLHRTTHALRPTEAGQLLY 598917 L F +F+ AA L VA +V++++ +LET LG L R AL T AGQ Sbjct: 12 LVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQQYA 71 Query: 598918 GRATRMLA---ELRGLQEDLHSQHAEPSGLLRVDCPAPFGRRHLMAALAAFMQRHPALQV 599088 R +LA E L + H+ L + C + L +A F HP + V Sbjct: 72 DRVHAILADCVEATALVMKEQTPHS-----LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 599089 DLVLTDSMVDLQGARLGSDVDLAVRIGPLEDTRFVATVLAPQRRVLCASAAYLARRGEPR 599268 +++ + + +L A V +R P A ++A CA RR P+ Sbjct: 127 RILVREGVFNLNAAEFDIGV-YYIRDVPPPGIAGTA-IVAEDVHAYCAPTFLAGRRVPPQ 184 Score = 47.0 bits (110), Expect = 0.009 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 2/134 (1%) Frame = +1 Query: 206023 LRALRYFVEVVRQQSFTAAADKLFVTQPTISKMVKALEDEIGSPLLLRDGRQMVLTDAGR 206202 L+ L +F R +FT AA++L V Q +SK V LE +G+ L +RD + + LT AG+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 206203 IVFQRGQDVLAAQAQLQSELNDLGTLGRGELTIGIPPLGGSLF-TPIIAAYKQRYPNIEL 206379 R +LA + + + T LTI +LF IA + +P + + Sbjct: 69 QYADRVHAILADCVEATALVMKEQT--PHSLTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 206380 K-LFEQGARMIEAA 206418 + L +G + AA Sbjct: 127 RILVREGVFNLNAA 140 Score = 46.6 bits (109), Expect = 0.012 Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 10/297 (3%) Frame = -3 Query: 3264508 IQAMEVFTRVVDANSFTRAADTLAMPRASVTTIIQNLEALLGVRLMHRTTRRLSLTQEGA 3264329 +Q + F +FTRAA+ L + + +V+ + LE LG L R + L LT+ G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 3264328 AYYEHCMKIISEIAEADASFQTGNRKPSGVLRVHMPSSLGRRIVLPSLSIFRQRYPDITL 3264149 Y + I+++ EA A S L + S + ++ F +P++++ Sbjct: 69 QYADRVHAILADCVEATALVMKEQTPHS--LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 3264148 EL----GLSDRYVDPVEEGIDCMIRVGP--LEDSSMVARRIGMLKRVTCASPDYLARHGE 3263987 + G+ + + G+ + V P + +++VA + CA P +LA Sbjct: 127 RILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDV----HAYCA-PTFLAGRRV 181 Query: 3263986 PHEIADLAEHHAV----NYRSSHGARAIPWVFMIDGKPFEVRMNGGVTVNDSDAYVTCGL 3263819 P + DL E + R G R W + G+ R ++ N + L Sbjct: 182 PPQ--DLMEATLLVAEEQQRQWMGWR--DWFRLTVGE-IGFRPARTISANSYPVLLQLAL 236 Query: 3263818 EGFGMIQPTLFMVLENLLDGSLVEVLPDCNPKPKPISIVYPHNRHLSQKVRVFADWI 3263648 G G I M+ + G LV +++P +R + V +F +W+ Sbjct: 237 HGHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 46.2 bits (108), Expect = 0.016 Identities = 67/317 (21%), Positives = 120/317 (37%), Gaps = 25/317 (7%) Frame = +2 Query: 2045756 LGSIELFCLAAELGSFTLXXXXXXXXXXXXXRSVARLEERLGVRLFVRTTRQIRLTDSGR 2045935 L + F AA G+FT + V +LE LG LFVR + + LT +G+ Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 2045936 RYFEQCRDALSQLVDAEREATGQQATPAGLLRISMPTPYGHYRVLPLLPAFRERYPDVRV 2046115 +Y ++ L+ V+A +Q TP L I+ + + + F +P+V V Sbjct: 69 QYADRVHAILADCVEATALVMKEQ-TPHS-LTIACASGTATLFLADRIAEFSAEHPEVSV 126 Query: 2046116 ETHLSNRNIDFAEEGYDLAIRGRAPADSNLVARTLEDAELVIVATPGYLKRAGTPTVIDD 2046295 + + +D+ + + D V PG AGT V +D Sbjct: 127 RILVREGVFNLNAAEFDIGV------------YYIRD-----VPPPGI---AGTAIVAED 166 Query: 2046296 LHAHECIQFELPSSGRQIP------------------WLFSDGSEEIDVATTGSYG---- 2046409 +HA+ F +GR++P W+ G + T G G Sbjct: 167 VHAYCAPTF---LAGRRVPPQDLMEATLLVAEEQQRQWM---GWRDWFRLTVGEIGFRPA 220 Query: 2046410 ---TSGDYLAGVTLARSGAGLFQAYRFIVEQDLRAGTLVEVLPGLGGRSRPFMLLYPHAR 2046580 ++ Y + LA G G ++ ++ + +G LV + +++P R Sbjct: 221 RTISANSYPVLLQLALHGHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADR 280 Query: 2046581 FLSSRVRVFVDFLIEHL 2046631 + V +F ++L+ H+ Sbjct: 281 RDTPAVTMFREWLLTHV 297 Score = 45.8 bits (107), Expect = 0.021 Identities = 63/298 (21%), Positives = 102/298 (34%), Gaps = 6/298 (2%) Frame = +1 Query: 3300286 PMDRLGDIRLFVEAAELGSLSAAGRKLNXXXXXXXXXXXXXXXXXXTRLFDRSTRQLRLT 3300465 P+ L + F AA G+ + A +LN T LF R + L LT Sbjct: 5 PLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLT 64 Query: 3300466 DEGRLYLNGCRXXXXXXXXXXXXXXXGRNVVGGRVRLSATSDFGRRRLLDWLDEFTARYP 3300645 G+ Y + R + + ++ S L D + EF+A +P Sbjct: 65 RAGQQYAD--RVHAILADCVEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHP 122 Query: 3300646 DVTFSLTASDSTVNLWQDEIDLAIRFA--APPDGXXXXXXXXXXXXVPCAAPSFIERHGV 3300819 +V+ + + NL E D+ + + PP G C AP+F+ V Sbjct: 123 EVSVRILVREGVFNLNAAEFDIGVYYIRDVPPPGIAGTAIVAEDVHAYC-APTFLAGRRV 181 Query: 3300820 PNDPHDLARFPCNVITVASGPMNTWRFTRGDDTQTCTVPLG----TAFETNDGGLAREWA 3300987 P P DL + VA W R D + +G N + + A Sbjct: 182 P--PQDLME---ATLLVAEEQQRQWMGWR-DWFRLTVGEIGFRPARTISANSYPVLLQLA 235 Query: 3300988 LRGRGIVLNSIWDVADDIRAGRLKVLLPDWRHQSAPLHAIYPGKRYMAPRVRVLLDFL 3301161 L G G +L + + +G+L + I+P R P V + ++L Sbjct: 236 LHGHGAILGWKHMITPLVESGKLVLASDAHASFGGAYQVIWPADRRDTPAVTMFREWL 293 Score = 43.1 bits (100), Expect = 0.13 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%) Frame = +2 Query: 1880012 EAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLTEPGKAVHQLI 1880191 +A ++ N T A L +Q VSKQ+ LE LG +F+R K L LT G+ + Sbjct: 16 DAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKAL-HLTRAGQQYADRV 74 Query: 1880192 ERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTDVFPK--VHLALRQ 1880365 +L D + A +Q L +A A L I +F+ P+ V + +R+ Sbjct: 75 HAILADC--VEATALVMKEQTPHSLTIACASGTATLFLADRIAEFSAEHPEVSVRILVRE 132 Query: 1880366 G 1880368 G Sbjct: 133 G 133 Score = 42.0 bits (97), Expect = 0.30 Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 1/160 (0%) Frame = -2 Query: 3052940 PTPDLRQWRYFVTVADERHFGRAAERLSMTQPPLSQAIRALEDALGVALFARTKRSVALT 3052761 P P L+ +F A +F RAAE L++ Q +S+ + LE LG LF R +++ LT Sbjct: 5 PLPPLQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLT 64 Query: 3052760 AVGAALLPDVXXXXXXXXXXXXXXXXXXRGEAGSLSLAFVSTADYGLLPALLRAFGTRYP 3052581 G V SL++A S L + F +P Sbjct: 65 RAGQQYADRVHAILADCVEATALVMKEQTPH--SLTIACASGTATLFLADRIAEFSAEHP 122 Query: 3052580 QVRLQLAEATSDVQIDELVAGRIDAGL-VIPPVPPRHAAG 3052464 +V +++ + L A D G+ I VPP AG Sbjct: 123 EVSVRILVREG---VFNLNAAEFDIGVYYIRDVPPPGIAG 159 Score = 41.6 bits (96), Expect = 0.39 Identities = 24/64 (37%), Positives = 35/64 (54%) Frame = -3 Query: 1982119 LRRLRYFVVVADELHFGRAALRLRVAQPPLTRHIAALESELGVRLFERSTRAVRLTPEGA 1981940 L+ L +F A +F RAA L VAQ +++ + LE+ LG LF R +A+ LT G Sbjct: 9 LQCLVFFDAAARHGNFTRAAEELNVAQGAVSKQVVKLETFLGTTLFVRDAKALHLTRAGQ 68 Query: 1981939 AFLD 1981928 + D Sbjct: 69 QYAD 72 >ref|NP_932465.1|hypothetical protein Length = 570 Score = 132 bits (332), Expect = 2e-28 Identities = 153/608 (25%), Positives = 248/608 (40%), Gaps = 11/608 (1%) Frame = +3 Query: 711864 EMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLT 712043 E + F RVA L+ ++I E ++++L S +TP N+GT R SC + Sbjct: 44 ETVRGAFRRVASTLAKHDIRPEAEE-RYFDLLWSGKLAMATPVFCNTGTDRGMPVSCAGS 102 Query: 712044 TVADDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDT 712223 V D + YE E A+L+K G + +R GS I ++ K+ G+VP +T Sbjct: 103 YVGDSVLDFYEGQTEVAMLAKNGFGTASYLGDIRPRGSDISTSHNKADGLVPVFDNFVNT 162 Query: 712224 AVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVM 712403 V G+R G Y++ H D F EL+ + H W+ F K Sbjct: 163 KTKVAAAGRR-GEWAGYVDFSHGD---FWELQGYVLKNPASAH----VGWV---FEKE-- 209 Query: 712404 EGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLF 712583 ++E + +AR W +++ M Sbjct: 210 ----------------------DYEKLKARDPEYMAR--------------WNELMYMRA 233 Query: 712584 ETGHPWITFKDPCNVRSPQ--QHVGV-VHSSNLCTEITLNTSDSEIAVCNLGSVNLVAHL 712754 TG ++ N +PQ ++ G+ + SS LCTEI L + D C L S+N Sbjct: 234 RTGKGYMWKNWIANELAPQAIKNSGIPIRSSQLCTEIALPSDDMHTFTCILSSLN----- 288 Query: 712755 VKQADGSFALDHDKLKRTI-SVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQD 712931 V D A D R + SV L +++Y + KA K R +G+G +GF Sbjct: 289 VSLWDEITADDIKWSVRFLDSVCSEFLAKAKELSYDTLHKAIRFTEKARALGLGTLGFHT 348 Query: 712932 CLHLLRTPYASEAAVAFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQDT 713111 L + + S AA ++ + A S ELAEE G +G+ Sbjct: 349 YLQMNDIAFESGAAHILNNQLYAEIKKAAEEGSRELAEEYGEPEWCKGT----------- 397 Query: 713112 LKLLAEARGGYVEVDTSESLDWTSLRSRIATHGMRNSNCVAIAPTATISNIIG-VSACIE 713288 GMRN+ + IAP + + + G VS +E Sbjct: 398 --------------------------------GMRNATLITIAPNMSSALLAGGVSQGVE 425 Query: 713289 PTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWD----EVMVADLKYFDGMLSRIDRIPA 713456 P N +++ + +G+F N L + LK+R L D E+M Y +G + +D + Sbjct: 426 PLVCNSFIQQSNAGDFVRSNPVLAKVLKDR-LTDKEIQELMEDIATYHNGSVQHLDILTD 484 Query: 713457 DLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRG--L 713630 ++++ TA+E+D ++ AS RQ+ IDQAQS+N++ + + A++ L Sbjct: 485 HEKSVFKTAYEIDQHAIIRLASARQRHIDQAQSINLFFSADEKESVIASVHRAFMDDPRL 544 Query: 713631 KTTYYLRT 713654 K+ YYLR+ Sbjct: 545 KSLYYLRS 552 >ref|NP_932362.1|topoisomerase II large subunit Length = 607 Score = 130 bits (327), Expect = 6e-28 Identities = 172/665 (25%), Positives = 285/665 (42%), Gaps = 20/665 (3%) Frame = -3 Query: 2955595 SAAYSEASIKVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGG---YGKQITVT 2955425 S AY + + V PG+ + II E+IDN+ DE + + +I + Sbjct: 24 SVAYEPHERFLFGKFQSVSYVPGL-------VKIIDEIIDNSVDEGIRTDFKFANKIDIR 76 Query: 2955424 LHA-DQSVSVEDDGRGIPFGM--HPEEGVPVVEIVFTRLHXXXXXXXXXXXAYTFSGGLH 2955254 + SV+V D+GRGIP M P+ +P +T+ S G++ Sbjct: 77 FDLLEGSVTVVDNGRGIPQSMVETPDGEMPKPVAAWTQTMAGSNFDDTNRV----SMGMN 132 Query: 2955253 GVGVSVTNALATRLDVTVWRDGKIAELGFAEGDVVKPLATQGAGRGE------KKSGTRV 2955092 GVG S+TN + + + DGK + + ++GA + K GT V Sbjct: 133 GVGSSLTNFFSKKF-IGETCDGK---------NFLTVTCSEGASNIDWETKPGKIKGTSV 182 Query: 2955091 QVWPNPKYFDSPNLP---LGELQRLLRSKAVLLPGVEVVLVNEKSGERQTWKYEDGLRGY 2954921 P+ K+F+ + + + + + +V+ P ++ + +G+ + K+ D + Sbjct: 183 YFIPDEKHFEGRTIDQQIIDIISDRITALSVVFPQIKFTI----NGQIASMKFADYAK-- 236 Query: 2954920 LLDEMNGSELLIPLFEGERFADSRSGDDTFAEGEGASWVVAWSEEGSLVRESYVNLIPTP 2954741 M G E LI E +RF S + S EG + SYVN + Sbjct: 237 ----MFGDESLI--VESDRF----------------SIAICNSPEG-FRQVSYVNGLNIK 273 Query: 2954740 AGGTHESGLRDGLYQAVKSFVEL-HNLQPKGVKLLAEDVFARVSFVLSAKVLDPQFQGQI 2954564 GG+H L DG+ + + ++ H ++ K ++ V V L +F Q Sbjct: 274 NGGSHIDYLVDGISEELMPAIKKKHKIEIS--KARVKECLTMVVVVRGMSNL--RFDSQT 329 Query: 2954563 KERLNSRDAVKLVSSFSRPALELWLNQHVEHGKKLAELVIKQAQARTRAGQKVEKRKSSG 2954384 KERL + A ++ S F +L ++ + + + + +I+ A AR A +K K+ Sbjct: 330 KERLTN-PAGEVKSHFDLDFKKL--SKQIMNTDAILQPIIEAALARHLAAEKAAMTKAQK 386 Query: 2954383 VAVLPGKLTDCETEDIARNE----LFLVEGDSAGGSAKMGRDKEYQAILPLRGKVLNTWE 2954216 A + + RN+ LFL EG+SA G +D+ LRGKV+NTW Sbjct: 387 AAAKTNCAKHIKAGEWGRNDIETTLFLTEGESAIGYLLKVKDENLHGGYALRGKVMNTWG 446 Query: 2954215 TERDRLFANNEVHDISVAIGVDPHSPDESVDLSNLRYGKICILSDADVDGSHIQVLLLTL 2954036 + + NNE+ DI G+D +PD D+S +Y I I++DAD DG L Sbjct: 447 MKGSDVLKNNELSDICAITGLDLANPD---DISQRKYKNIAIMTDADPDGQGSIYPCLLA 503 Query: 2954035 FFKHFPQLIERGHVCVARPPLFRVDAPARGKKAAQKLYALDDGELEAILDKLRKDGVRET 2953856 FF +P+L + G V + P+ ++ +GK + Y L + E E +KD Sbjct: 504 FFARWPKLFDEGSVRFVKTPVVILN---KGKN-TKWFYTLTEFEKE------KKD---YK 550 Query: 2953855 QWSISRFKGLGEMSAEQLWDTTMNPDTRRLMPVKLGELDYEATVARMTMLMGKGEAAARR 2953676 W + KGLG + + D NP+ V LG+ D+E ML+G +AA R+ Sbjct: 551 GWDLRYIKGLGSLREHEYSDVVNNPN---YDIVDLGD-DWEEL---FEMLLG-DDAALRK 602 Query: 2953675 GWLEE 2953661 W+ + Sbjct: 603 EWMSQ 607 Score = 109 bits (272), Expect = 2e-21 Identities = 141/584 (24%), Positives = 245/584 (41%), Gaps = 30/584 (5%) Frame = +1 Query: 149266 ASSIQILEGLEAVRKRPGMYIGDT----------------SDGTGLHHLVFEVLDNSIDE 149397 + ++L E V RP MY+G S GL ++ E++DNS+DE Sbjct: 2 SDEFKVLTPREHVILRPNMYVGSVAYEPHERFLFGKFQSVSYVPGLVKIIDEIIDNSVDE 61 Query: 149398 ALAG---YCNDIHVTIHA-DNSISVTDNGRGIPTD-VKMNDKHEPKRSAAEIVMTELHAG 149562 + + N I + + S++V DNGRGIP V+ D PK AA T+ AG Sbjct: 62 GIRTDFKFANKIDIRFDLLEGSVTVVDNGRGIPQSMVETPDGEMPKPVAA---WTQTMAG 118 Query: 149563 GKFDQNSYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKRFMEFHRGVAQDRVLEMVDGV 149742 FD + +VS G++GVG S N S + DGK V +D Sbjct: 119 SNFDDTN-RVSMGMNGVGSSLTNFFSKKF-IGETCDGKNFLT-----VTCSEGASNIDW- 170 Query: 149743 EVSPMLVTGDTENRGTEVHFMADPTIFG--TVEYHY-DILAKRMRELSFLNNGVRIRLT- 149910 E P + +GT V+F+ D F T++ DI++ R+ LS + ++ + Sbjct: 171 ETKPGKI------KGTSVYFIPDEKHFEGRTIDQQIIDIISDRITALSVVFPQIKFTING 224 Query: 149911 DLRSGKEDDFAFAGGVKGFVEFINKTKTNLHPTVFFATGEKDGVGVEVAMQWNDSYNENV 150090 + S K D+A G + + E D + + N Sbjct: 225 QIASMKFADYAKMFGDESLIV------------------ESDRFSIAIC---NSPEGFRQ 263 Query: 150091 LCFTNNIPQRDGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETTGDDMREGLSCVLSVK 150270 + + N + ++GG+H+ L ++ + I KK K+E + ++E L+ V+ V+ Sbjct: 264 VSYVNGLNIKNGGSHIDYLVDGISEELMP-----AIKKKHKIEISKARVKECLTMVVVVR 318 Query: 150271 -VPEPKFSSQTKDKLVSSEVRAPVEEVVAKALEEF--LLETPIDAKIICGKIVEXXXXXX 150441 + +F SQTK++L + P EV + +F L + ++ I I+E Sbjct: 319 GMSNLRFDSQTKERLTN-----PAGEVKSHFDLDFKKLSKQIMNTDAILQPIIEAALARH 373 Query: 150442 XXXXXXEMTRRKGVLDGVGLPGKL-ADCQEKDPAKCEIYIVEGDSAGGSAKQGRDRKFQA 150618 MT+ + + A ++ + +++ EG+SA G + +D Sbjct: 374 LAAEKAAMTKAQKAAAKTNCAKHIKAGEWGRNDIETTLFLTEGESAIGYLLKVKDENLHG 433 Query: 150619 ILPLRGKVLNVEKARYDKLLSSEQIVTLVTALGCGIGKEDYNLDKLRYHRIIIMTDADVD 150798 LRGKV+N + +L + ++ + G + D ++ + +Y I IMTDAD D Sbjct: 434 GYALRGKVMNTWGMKGSDVLKNNELSDICAITGLDLANPD-DISQRKYKNIAIMTDADPD 492 Query: 150799 G-AHIRTLLLTFLYRQMPDMIERGYVYIAQPPLYKIKAGKDERY 150927 G I LL F + + P + + G V + P+ + GK+ ++ Sbjct: 493 GQGSIYPCLLAF-FARWPKLFDEGSVRFVKTPVVILNKGKNTKW 535 >ref|NP_861694.1|gp60plus39 large subunit topoisomerase II Length = 606 Score = 130 bits (326), Expect = 8e-28 Identities = 152/580 (26%), Positives = 259/580 (44%), Gaps = 13/580 (2%) Frame = +1 Query: 149350 GLHHLVFEVLDNSIDEALAG---YCNDIHVTIHADNSISVTDNGRGIPTDVKMNDKHEPK 149520 GL L+ E++DNS+DEA+ + N I V I +N +SV DNGRGIP + + D+ + Sbjct: 48 GLVKLIDEIIDNSVDEAIRTSFKFANKIDVQIK-NNQVSVEDNGRGIPQGL-VTDQTGEQ 105 Query: 149521 RSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKRFMEFHR 149700 T AGG F +S + +GG++GVG S N S+ L + DG+ Sbjct: 106 IPGPVAAWTIPKAGGNFGDDSERKTGGMNGVGSSLTNIFST-LFTGITSDGENEI----- 159 Query: 149701 GVAQDRVLEMVDGVEVSPMLVTGDTENRGTEVHFMADPTIF---GTVEYHYDILAKRMRE 149871 + +G+E + + ++ +GT+V F D T F + + DI R++ Sbjct: 160 ------TVNCSNGME-NKSWSSKKSKGKGTKVIFTPDFTSFEEHNLSQIYLDITLDRLQT 212 Query: 149872 LSFLNNGVRIRLTDLRSGKEDDFAFAGGVKGFVEFINKTKTNLHPTVFFATGEKDGVGVE 150051 L+ + ++ +GK+ D F K F E N + N ++ F T Sbjct: 213 LAVVYPDIKFTF----NGKKVDGNFKRFAKQFGED-NIIQENDKVSIAFTTSP------- 260 Query: 150052 VAMQWNDSYNENVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYITDNEIAKKAK-VETTG 150228 D + L + NNI ++GG H+ M + + I KK K +E T Sbjct: 261 ------DGFRH--LTYVNNIHTKNGGHHV---ECVMDDICEHLLPG--IKKKYKGIEVTK 307 Query: 150229 DDMREGLSCVLSVK-VPEPKFSSQTKDKLVSS--EVRAPVEEVVAKALEEFLLETPIDAK 150399 ++E L+ ++ ++ + +F SQTK++L S+ ++R ++ + AK + + LL+ + Sbjct: 308 ARVKECLTMLMFIRDMSNMRFDSQTKERLTSTYGDIRNHIQ-LDAKKIAQALLKN----E 362 Query: 150400 IICGKIVEXXXXXXXXXXXXEMTR--RKGVLDGVGLPGKLADCQEKDPAKCEIYIVEGDS 150573 + IVE T+ +K V K C + A +++ EGDS Sbjct: 363 ALIMPIVEAALARKLAAEKAAETKAAKKATKAKVHKHIKANQCGKD--ADTTLFLTEGDS 420 Query: 150574 AGGSAKQGRDRKFQAILPLRGKVLNVEKARYDKLLSSEQIVTLVTALGCGIGKEDYNLDK 150753 A G RDR+ PLRGKV+N Y ++ ++++ + G +G++ N + Sbjct: 421 AIGYLIDVRDRELHGGFPLRGKVMNSWGMSYADMMKNKELFDICAITGLILGEKAENTN- 479 Query: 150754 LRYHRIIIMTDADVDG-AHIRTLLLTFLYRQMPDMIERGYVYIAQPPLYKIKAGKDERYL 150930 Y I IMTDAD DG I LL F + P++ E+G + + P+ + GK +++ Sbjct: 480 --YRNIAIMTDADHDGLGSIYPALLAF-FSNWPELFEQGRIRFVKTPVIIAQIGKTQKWF 536 Query: 150931 KDDVELNAHMLRLALQGSELVPGENAAVISGDALGELARS 151050 E + + +P + I G LG L +S Sbjct: 537 YTVAEYE--------EAKDTLPKHSIRYIKG--LGSLEKS 566 Score = 115 bits (289), Expect = 2e-23 Identities = 154/587 (26%), Positives = 239/587 (40%), Gaps = 15/587 (2%) Frame = -3 Query: 2955496 IIQEVIDNASDEALGG---YGKQITVTLHADQSVSVEDDGRGIPFGMHPEEGVPVVEIVF 2955326 +I E+IDN+ DEA+ + +I V + +Q VSVED+GRGIP G+ ++ + Sbjct: 52 LIDEIIDNSVDEAIRTSFKFANKIDVQIKNNQ-VSVEDNGRGIPQGLVTDQTGEQIPGPV 110 Query: 2955325 TRLHXXXXXXXXXXXAYTFSGGLHGVGVSVTNALATRLDVTVWRDGKIA-ELGFAEGDVV 2955149 + +GG++GVG S+TN +T L + DG+ + + G Sbjct: 111 AAWTIPKAGGNFGDDSERKTGGMNGVGSSLTNIFST-LFTGITSDGENEITVNCSNGMEN 169 Query: 2955148 KPLATQGAGRGEKKSGTRVQVWPNPKYFDSPNLP---LGELQRLLRSKAVLLPGVEVVLV 2954978 K +++ + K GT+V P+ F+ NL L L++ AV+ P ++ Sbjct: 170 KSWSSKKS----KGKGTKVIFTPDFTSFEEHNLSQIYLDITLDRLQTLAVVYPDIKFTFN 225 Query: 2954977 NEKSGERQTWKYEDGLRGYLLDEMNGSELLIPLFEGERFADSRSGDDTFAEGEGASWVVA 2954798 +K DG +RFA D+ E + S Sbjct: 226 GKKV---------DG-------------------NFKRFAKQFGEDNIIQENDKVSIAFT 257 Query: 2954797 WSEEGSLVRESYVNLIPTPAGGTHESGLRDGLYQAVKSFVELHNLQPKGVKLLAEDVFAR 2954618 S +G +YVN I T GG H + D + + + ++ + K ++ Sbjct: 258 TSPDG-FRHLTYVNNIHTKNGGHHVECVMDDICEHLLPGIKKKYKGIEVTKARVKECLTM 316 Query: 2954617 VSFVLSAKVLDPQFQGQIKERLNS-----RDAVKLVSSFSRPAL---ELWLNQHVEHGKK 2954462 + F+ + +F Q KERL S R+ ++L + AL E + VE Sbjct: 317 LMFIRDMSNM--RFDSQTKERLTSTYGDIRNHIQLDAKKIAQALLKNEALIMPIVEAA-- 372 Query: 2954461 LAELVIKQAQARTRAGQKVEKRKSSGVAVLPGKLTDCETEDIARNELFLVEGDSAGGSAK 2954282 LA + + A T+A +K K K K C + A LFL EGDSA G Sbjct: 373 LARKLAAEKAAETKAAKKATKAKVHKHI----KANQCGKD--ADTTLFLTEGDSAIGYLI 426 Query: 2954281 MGRDKEYQAILPLRGKVLNTWETERDRLFANNEVHDISVAIGVDPHSPDESVDLSNLRYG 2954102 RD+E PLRGKV+N+W + N E+ DI G+ E N Y Sbjct: 427 DVRDRELHGGFPLRGKVMNSWGMSYADMMKNKELFDICAITGLILGEKAE-----NTNYR 481 Query: 2954101 KICILSDADVDGSHIQVLLLTLFFKHFPQLIERGHVCVARPPLFRVDAPARGKKAAQKLY 2953922 I I++DAD DG L FF ++P+L E+G + + P+ A+ K + Y Sbjct: 482 NIAIMTDADHDGLGSIYPALLAFFSNWPELFEQGRIRFVKTPVI----IAQIGKTQKWFY 537 Query: 2953921 ALDDGELEAILDKLRKDGVRETQWSISRFKGLGEMSAEQLWDTTMNP 2953781 + E E D L K +R KGLG + + NP Sbjct: 538 TV--AEYEEAKDTLPKHSIR-------YIKGLGSLEKSEYRKMIQNP 575 >ref|NP_891577.1|topoisomerase II large subunit Length = 607 Score = 127 bits (318), Expect = 7e-27 Identities = 161/600 (26%), Positives = 260/600 (43%), Gaps = 44/600 (7%) Frame = +1 Query: 149269 SSIQILEGLEAVRKRPGMYIGDT----------------SDGTGLHHLVFEVLDNSIDEA 149400 S +IL E V KR GMYIG T S GL ++ E++DNS+DEA Sbjct: 2 SEFRILSDREHVLKRAGMYIGSTTYEEHQRFLFGKWTKISYVPGLVKIIDEIIDNSVDEA 61 Query: 149401 LAG---YCNDIHVTIHADNSISVTDNGRGIPTDVKMNDK--HEPKRSAAEIVMTELHAGG 149565 + + N I V I +N ++VTDNGRGIP + + P+ AA T AG Sbjct: 62 IRTNFEFANVISVDIQ-NNIVTVTDNGRGIPQHMVTTPEGTQIPQPVAA---WTRTKAGS 117 Query: 149566 KFDQNSYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKRFMEFHRGVAQDRVLEMVDGVE 149745 FD + +++ G++GVG S N S W V DG+ + ++ +G E Sbjct: 118 NFDDTN-RLTQGMNGVGSSLSNFFSDWF-TGVTCDGE-----------TEMTVQCTNGAE 164 Query: 149746 VSPMLVTGDTENRGTEVHF----------MADPTIFGTVEYHYDILAKRMRELSFLNNGV 149895 + + ++ +GT V F M D ++ V L+ +++F NG Sbjct: 165 -NITWSSKPSKLKGTNVTFCPDFDHFEGYMMDNSVLDIVHDRLQSLSVIFPKITFKFNGK 223 Query: 149896 RIRLTDLRSGKEDDFAFAGGVKGFVEFINKTKTNLHPTVFFATGEKDGVGVEVAMQWNDS 150075 RI K D+A FV L P V +G G + Sbjct: 224 RI------VSKFKDYAKLYNDDPFVIEDKNFSLALVPAV-------EGEGFK-------- 262 Query: 150076 YNENVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETTGDDMREGLSC 150255 + F N + ++GGTH+ + + I K I K+ KV+ T ++ GL+C Sbjct: 263 ----SVSFANGLFTKNGGTHVDYVTDDLCEEIVK-----RIKKEYKVDVTKAAVKSGLTC 313 Query: 150256 VLSVK-VPEPKFSSQTKDKLV--SSEVRAPVE-------EVVAKALEEFLLETPIDAKII 150405 +L V+ +P +F SQTK++L + +++ ++ +V+AK E ++ PI A ++ Sbjct: 314 ILIVRELPNLRFDSQTKERLTNPTGDIKRHIDLDFKKLAKVIAKK-ENIIM--PIIAVVL 370 Query: 150406 CGKIVEXXXXXXXXXXXXEMTRRKGVLDGVGLPGKLADCQEKDPAKCEIYIVEGDSAGGS 150585 K + +R V V A+ D A+ +++ EGDSA Sbjct: 371 ARK---EAADKAAATKAAKAAKRAKVAKHV-----KANLIGTD-AETTLFLTEGDSAINY 421 Query: 150586 AKQGRDRKFQAILPLRGKVLNVEKARYDKLLSSEQIVTLVTALGCGIGKEDYNLDKLRYH 150765 RD+ PLRGK L + K++ + +I ++ G G + LD ++Y Sbjct: 422 LISVRDQDLHGGFPLRGKTLTTWEQPEAKIVKNAEIFNIMAITGLQFGVD--ALDVMQYK 479 Query: 150766 RIIIMTDADVDG-AHIRTLLLTFLYRQMPDMIERGYVYIAQPPLY--KIKAGKDERYLKD 150936 I IMTDAD DG I+ L++F + + P++ E G + + P+ + K G D R+ D Sbjct: 480 NIAIMTDADTDGIGSIKPSLISF-FARWPELFEDGRIRFIKTPIIIAEPKKGDDVRWYYD 538 Score = 100 bits (249), Expect = 7e-19 Identities = 149/595 (25%), Positives = 241/595 (40%), Gaps = 34/595 (5%) Frame = -3 Query: 2955496 IIQEVIDNASDEALGG---YGKQITVTLHADQSVSVEDDGRGIPFGM-HPEEGVPVVEIV 2955329 II E+IDN+ DEA+ + I+V + + V+V D+GRGIP M EG + + V Sbjct: 49 IIDEIIDNSVDEAIRTNFEFANVISVDIQ-NNIVTVTDNGRGIPQHMVTTPEGTQIPQPV 107 Query: 2955328 FTRLHXXXXXXXXXXXAYTFSGGLHGVGVSVTNALATRLDVTVWRDGKIAELGFAEGDVV 2955149 T G++GVG S++N + W G + G E V Sbjct: 108 AAWTRTKAGSNFDDTNRLT--QGMNGVGSSLSNFFSD------WFTGVTCD-GETEMTVQ 158 Query: 2955148 KPLATQGA------GRGEKKSGTRVQVWPNPKYFDS---PNLPLGELQRLLRSKAVLLPG 2954996 T GA + K GT V P+ +F+ N L + L+S +V+ P Sbjct: 159 ---CTNGAENITWSSKPSKLKGTNVTFCPDFDHFEGYMMDNSVLDIVHDRLQSLSVIFPK 215 Query: 2954995 VEVVLVNEKSGERQTWKYEDGLRGY-----LLDEMNGSELLIPLFEGERFADSRSGDDTF 2954831 + +G+R K++D + Y ++++ N S L+P EGE F Sbjct: 216 ITFKF----NGKRIVSKFKDYAKLYNDDPFVIEDKNFSLALVPAVEGEGFKSV------- 264 Query: 2954830 AEGEGASWVVAWSEEGSLVRESYVNLIPTPAGGTHESGLRDGLYQAVKSFVELHNLQPKG 2954651 S+ N + T GGTH + D L + + ++ + Sbjct: 265 ---------------------SFANGLFTKNGGTHVDYVTDDLCEEIVKRIK----KEYK 299 Query: 2954650 VKLLAEDVFARVSFVLSAKVL-DPQFQGQIKERLNSRDAVKLVSSFSRPALELWLNQHVE 2954474 V + V + ++ +L + L + +F Q KERL + + +H++ Sbjct: 300 VDVTKAAVKSGLTCILIVRELPNLRFDSQTKERLTNPTGD--------------IKRHID 345 Query: 2954473 HG-KKLAELVIKQAQ----------ARTRAGQKVEKRKSSGVAVLPGKLTDCETEDI--- 2954336 KKLA+++ K+ AR A K K++ A + I Sbjct: 346 LDFKKLAKVIAKKENIIMPIIAVVLARKEAADKAAATKAAKAAKRAKVAKHVKANLIGTD 405 Query: 2954335 ARNELFLVEGDSAGGSAKMGRDKEYQAILPLRGKVLNTWETERDRLFANNEVHDISVAIG 2954156 A LFL EGDSA RD++ PLRGK L TWE ++ N E+ +I G Sbjct: 406 AETTLFLTEGDSAINYLISVRDQDLHGGFPLRGKTLTTWEQPEAKIVKNAEIFNIMAITG 465 Query: 2954155 VDPHSPDESVD-LSNLRYGKICILSDADVDGSHIQVLLLTLFFKHFPQLIERGHVCVARP 2953979 + VD L ++Y I I++DAD DG L FF +P+L E G + + Sbjct: 466 L-----QFGVDALDVMQYKNIAIMTDADTDGIGSIKPSLISFFARWPELFEDGRIRFIKT 520 Query: 2953978 PLFRVDAPARGKKAAQKLYALDDGELEAILDKLRKDGVRETQWSISRFKGLGEMS 2953814 P+ + P +G + Y L+D E + +D ++ ++I KGL ++ Sbjct: 521 PII-IAEPKKGDD-VRWYYDLEDFEND-------RDNIK--GYNIRYIKGLASLT 564 >ref|NP_899293.1|topoisomerase II large subunit Length = 597 Score = 127 bits (318), Expect = 7e-27 Identities = 149/567 (26%), Positives = 247/567 (43%), Gaps = 26/567 (4%) Frame = +1 Query: 149272 SIQILEGLEAVRKRPGMYIGDTSDGT----------------GLHHLVFEVLDNSIDEAL 149403 + QIL + V KRPGMYIG GL ++ EV+DNS+DEA+ Sbjct: 6 NFQILSDKQHVLKRPGMYIGSVDREAHERFVLGEYKQIEYVPGLVKIINEVIDNSLDEAI 65 Query: 149404 AG---YCNDIHVTIHADNSISVTDNGRGIPTDVKMNDKHEPKRSAAEIVMTELHAGGKFD 149574 + N I V + N I++ DNGRGIP D K+ D H + E T AG F+ Sbjct: 66 RTKFKFANVIEVKVEG-NRITIADNGRGIPQD-KVIDPHGNELLRPEAAWTRTKAGSNFE 123 Query: 149575 QNSYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKRFMEFHRGVAQDRVLEMVDGVEVSP 149754 + V G++GVG + N S + DGK V+ E + Sbjct: 124 DDRTTV--GMNGVGAALTNYFSHQF-IGKTCDGKNTVT-----VSCSNNAERI------- 168 Query: 149755 MLVTGDTENRGTEVHFMADPT---IFGTVEYHYDILAKRMRELSFLNNGVRIRLTDLRSG 149925 + T +GT V F+ D +FG +I+ R+ LS + + +G Sbjct: 169 FVRTSKGGTQGTSVEFIPDFNRFGVFGISPQDEEIIKDRLAALSVAFPEITFKY----NG 224 Query: 149926 KEDDFAFAGGVKGFVEFINKTKTNLHPTVFFATGEKDGVGVEVAMQWNDSYNENVLCFTN 150105 K+ A +K + + + E D V + +A +D + N F N Sbjct: 225 KKH----APTLKQYAKMFGTD----------VSFEFDNVALFIAA--SDEFRHN--SFIN 266 Query: 150106 NIPQRDGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETTGDDMREGLSCVLSVK-VPEP 150282 + +GGTH+ ++ ++ I I +K K+ ++ GL+ L ++ +P Sbjct: 267 GVHTINGGTHVDYFS---NKLADELIP--MIKRKHKINVPKPQLKNGLTIGLFIRNFVDP 321 Query: 150283 KFSSQTKDKLVSSE--VRAPVEEVVAKALEEFLLETPIDAKIICGKIVEXXXXXXXXXXX 150456 KF SQTK++L SS+ V ++++ + + +L D II I+E Sbjct: 322 KFDSQTKERLTSSQGDVSPYLKDISYDKIAKKILA---DDDIIM-PIIEALLAKQHAAEA 377 Query: 150457 XEMTRRKGVLDGVGLPGKLADCQEKDPAKCEIYIVEGDSAGGSAKQGRDRKFQAILPLRG 150636 E+ R++ K+ D + +++ EG SA G + RD K +PLRG Sbjct: 378 RELARKQKKAQNA----KVVDHIKATMPGGTLFLTEGKSAIGYLIKVRDSKKHGGIPLRG 433 Query: 150637 KVLNVEKARYDKLLSSEQIVTLVTALGCGIGKEDYNLDKLRYHRIIIMTDADVDG-AHIR 150813 KVL+ R K++ ++++ +++ L +G +D + + YH I I+ DADVDG I Sbjct: 434 KVLSTWGKRPAKIMENKELCDIMSVLNIQLGNDD--IRDMYYHDIGILVDADVDGKGSIF 491 Query: 150814 TLLLTFLYRQMPDMIERGYVYIAQPPL 150894 LLL F Y P++ ++ + + P+ Sbjct: 492 PLLLAFFY-NWPELYKQKRIKFVRTPV 517 Score = 100 bits (250), Expect = 5e-19 Identities = 153/629 (24%), Positives = 257/629 (40%), Gaps = 39/629 (6%) Frame = -3 Query: 2955574 SIKVLKGLEPVKQRPGMYTRTENP--------------------LHIIQEVIDNASDEAL 2955455 + ++L + V +RPGMY + + + II EVIDN+ DEA+ Sbjct: 6 NFQILSDKQHVLKRPGMYIGSVDREAHERFVLGEYKQIEYVPGLVKIINEVIDNSLDEAI 65 Query: 2955454 GG---YGKQITVTLHADQSVSVEDDGRGIP----FGMHPEEGVPVVEIVFTRLHXXXXXX 2955296 + I V + ++ +++ D+GRGIP H E + E +TR Sbjct: 66 RTKFKFANVIEVKVEGNR-ITIADNGRGIPQDKVIDPHGNELLRP-EAAWTRTKAGSNFE 123 Query: 2955295 XXXXXAYTFSGGLHGVGVSVTNALATRLDVTVWRDGKIAELGFAEGDVVKPLATQGAGRG 2955116 G++GVG ++TN + + + DGK + + G Sbjct: 124 DDRTTV-----GMNGVGAALTNYFSHQF-IGKTCDGKNTVTVSCSNNAERIFVRTSKGGT 177 Query: 2955115 EKKSGTRVQVWPNPKYFDSPNL-PLGE--LQRLLRSKAVLLPGVEVVLVNEKSGERQTWK 2954945 + GT V+ P+ F + P E ++ L + +V P + T+K Sbjct: 178 Q---GTSVEFIPDFNRFGVFGISPQDEEIIKDRLAALSVAFPEI-------------TFK 221 Query: 2954944 YEDGLRGYLLDEMNGSELLIPLFEGERFADSRSGDDTFAEGEGASWVVAWSEEGSLVRES 2954765 Y NG + L + + G D E + + +A S+E S Sbjct: 222 Y------------NGKKHAPTLKQYAKMF----GTDVSFEFDNVALFIAASDE--FRHNS 263 Query: 2954764 YVNLIPTPAGGTH----ESGLRDGLYQAVKSFVELHNLQPKGVKLLAEDVFARVSFVLSA 2954597 ++N + T GGTH + L D L +K +++ +P+ L +F R Sbjct: 264 FINGVHTINGGTHVDYFSNKLADELIPMIKRKHKINVPKPQLKNGLTIGLFIR------- 316 Query: 2954596 KVLDPQFQGQIKERLNSRDA-----VKLVSSFSRPALELWLNQHVEHGKKLAELVIKQAQ 2954432 +DP+F Q KERL S +K +S + + A ++ + + + L+ KQ Sbjct: 317 NFVDPKFDSQTKERLTSSQGDVSPYLKDIS-YDKIAKKILADDDIIM-PIIEALLAKQHA 374 Query: 2954431 ARTRAGQKVEKRKSSGVAVLPGKLTDCETEDIARNELFLVEGDSAGGSAKMGRDKEYQAI 2954252 A R + +K+ + K+ D + LFL EG SA G RD + Sbjct: 375 AEARELARKQKKAQNA------KVVDHIKATMPGGTLFLTEGKSAIGYLIKVRDSKKHGG 428 Query: 2954251 LPLRGKVLNTWETERDRLFANNEVHDISVAIGVDPHSPDESVDLSNLRYGKICILSDADV 2954072 +PLRGKVL+TW ++ N E+ DI + + + D+ ++ Y I IL DADV Sbjct: 429 IPLRGKVLSTWGKRPAKIMENKELCDIMSVLNIQLGND----DIRDMYYHDIGILVDADV 484 Query: 2954071 DGSHIQVLLLTLFFKHFPQLIERGHVCVARPPLFRVDAPARGKKAAQKLYALDDGELEAI 2953892 DG LL FF ++P+L ++ + R P+ A KK + Y++D+ Sbjct: 485 DGKGSIFPLLLAFFYNWPELYKQKRIKFVRTPV----VIATNKKETKWFYSIDE------ 534 Query: 2953891 LDKLRKDGVRETQWSISRFKGLGEMSAEQ 2953805 RK + +T W I KGLG ++ ++ Sbjct: 535 ---YRKAKLSKT-WKIRYIKGLGSLTEKE 559 >ref|NP_597931.1|PhoH-like protein Length = 384 Score = 126 bits (317), Expect = 9e-27 Identities = 66/156 (42%), Positives = 93/156 (59%) Frame = +1 Query: 3303256 RTPAQREYLKQILSHDVTLGVGPAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGER 3303435 RT Q++ + + + +GPAGTGKTY+ A D ++ +IV+TRP V G+ Sbjct: 181 RTDKQKDLIDALKTSRQVFILGPAGTGKTYVTATYASDLYTTKEIDKIVITRPHVAVGKE 240 Query: 3303436 LGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMFERQMIEIAPLAYMRGRTLNHAFII 3303615 LGFL GDL +K P+ P+ D L LG + IE+APLA MRGR+ ++AFII Sbjct: 241 LGFLKGDLTEKTMPWALPVLDVLEKHLGKGAVETGIKNGNIEMAPLALMRGRSFDNAFII 300 Query: 3303616 LDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDL 3303723 +DE QN + ++KM LTR+G G+ V+ GD Q DL Sbjct: 301 VDETQNISTHELKMLLTRVGEGTTIVLNGDAQQSDL 336 Score = 84.7 bits (208), Expect = 4e-14 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 1/171 (0%) Frame = +3 Query: 2359995 GITARNREQNFALNLLMNPEIDFVTLLGQAGTGKTXXXXXXXXXXXXDDKRYNEIIVTRA 2360174 G+ R +Q ++ L F+ LG AGTGKT K ++I++TR Sbjct: 177 GLVPRTDKQKDLIDALKTSRQVFI--LGPAGTGKTYVTATYASDLYTT-KEIDKIVITRP 233 Query: 2360175 TVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQKTDDAAGEWGRAATQELIRS-RLKVK 2360351 V VG+++GFL G EK PW L+VL+K G+ A + I++ +++ Sbjct: 234 HVAVGKELGFLKGDLTEKTMPWALPV---LDVLEK------HLGKGAVETGIKNGNIEMA 284 Query: 2360352 SMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQID 2360504 + MRGR+F + ++I+DE QN++ ++K L+TR G GT IV G+ Q D Sbjct: 285 PLALMRGRSFDNAFIIVDETQNISTHELKMLLTRVGEGTTIVLNGDAQQSD 335 >ref|NP_803872.1|ORF306 Length = 779 Score = 126 bits (317), Expect = 9e-27 Identities = 161/671 (23%), Positives = 263/671 (39%), Gaps = 37/671 (5%) Frame = +3 Query: 711774 LDANRDLQFGYLGLQTLYDRYFLHVE--GTRIEMPQAFFMRVAMGLSLNEI--DRETRAI 711941 +D + DL + L + +Y L G E Q +MR+AM L+ E R T Sbjct: 145 IDHDLDLLCPHFSLHHIRGKYALRNRKTGQEYETAQFVYMRMAMALAEKEPAETRMTHVE 204 Query: 711942 EFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDGIYEALKENA--LLSKFAG 712115 +Y +LS+ + TP N GT +SC L D+ G+ A+ + ++++ + Sbjct: 205 NYYKLLSNKILSAPTPNYVNLGTKLRGFASCCLFASGDN--GVSLAMGDYIANIMTQSSA 262 Query: 712116 GLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLD 712295 G+G + R++G I+ QG P++ V+ AV N R GAV Y ++ + Sbjct: 263 GIGVN-LMTRSIGDPIRNGLIIHQGKKPYIDVIGK-AVRANLQNGRGGAVTCYYSAFDPE 320 Query: 712296 IEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWT-LFSPSTCPDLHDKFGA- 712469 + +LR + R+ D++ A F K+ + +F+P T PDLHD F + Sbjct: 321 ADMITQLRNPRSTEDRKNRDLHYAFLSNKFFAKKAAQKDGMIFVFNPFTAPDLHDAFYSG 380 Query: 712470 ---EFEAAYTAYEDKVARGEIKLFKK-IPAAQLWRKMLGMLFETGHPWITFKDPCNVRSP 712637 +F Y YE + K K + A L + ML +ETG + D N +P Sbjct: 381 DIDKFIKLYEKYE-----ADPKFEKTYVNARDLLKSMLVEAYETGTIYSAQIDELNHHTP 435 Query: 712638 QQHVGVVHSSNLCTEITLNTSD---------------SEIAVCNLGSVNLVAHLVKQADG 712772 + ++SSNLC EI T EIA C+L ++ Sbjct: 436 FKEP--IYSSNLCLEIAEPTKPYYRMEDLYSSEDHGRGEIATCSLAAI------------ 481 Query: 712773 SFALDHDKLKRTISVA----MRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLH 712940 A+D+ K+T +A ++M+D I YA + G+GIMG + Sbjct: 482 --AVDNVPDKQTYEMAAYYALKMIDYCILNAEYAFPHLALTAKNRMSAGVGIMGLATHMA 539 Query: 712941 LLRTPYASEAAVAFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQDTLKL 713120 Y+S+A A E Y+ AS ++++ERG + W G P+ T Sbjct: 540 RAGLKYSSDAGKAEIHFIAERHMYFLIKASLKISKERGNAPWIHKTKWPEGWTPRKTYNK 599 Query: 713121 LAEARGGYVEVDTSESLDWTSLRSRIATH-GMRNSNCVAIAPTATISNIIGVSACIEPTF 713297 + +E E W L I + G+ +S A P S +G + P Sbjct: 600 SVDT---IIEGGFEELYPWDELEKEIKENGGIAHSVLAAYMPGEASSKALGSTNGPYPVR 656 Query: 713298 QNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYA 713477 + + K+ D R LW D Y +Y Sbjct: 657 RLILNKT---------------DNGARVLWAAPYGDDDSY-----------------VYE 684 Query: 713478 TAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLA-----WLRGLKTTY 713642 +A+++ L++ + QKW DQ S ++Y +K+ L RG+KT Y Sbjct: 685 SAYDIPTKDLIDCYAIIQKWTDQTISADLYRRIVGSEKISSNEMLGNHFYMVKRGMKTRY 744 Query: 713643 YLRTMAATHVE 713675 Y+ A ++ Sbjct: 745 YVNLETAAGLD 755 >ref|NP_943927.1|NrdA-A aerobic NDP reductase large subunit Length = 473 Score = 126 bits (317), Expect = 9e-27 Identities = 116/430 (26%), Positives = 176/430 (40%), Gaps = 16/430 (3%) Frame = +3 Query: 711456 GAAVNPDPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPA-YSQVTSRILLHTIRRE 711632 G ++P+ I+ + ++ DG+ + AI A I + + Y V +R+ ++ IR++ Sbjct: 28 GTRIDPNEILNGIMPSITDGMSTKNIQKLAIKFAADRISIEQSDYQYVAARLQMYAIRKD 87 Query: 711633 ILGEEVVQAEMSTRYAEYFPQFLKRG----VDAGXXXXXXXXXXXXXXGEALDA----NR 711788 + Y ++ P LKR V G L+A +R Sbjct: 88 V-------------YNQFDPIHLKRHTLDLVQDGIYDKDLAIKWTDDEFNELNAYIKHDR 134 Query: 711789 DLQFGYLGLQTLYDRYFLHVEGTR--IEMPQAFFMRVAMGLSLNE-IDRETRAIEFYNVL 711959 D Y G+ ++Y T E PQ +M VAM L +E DR + FY+V Sbjct: 135 DFDLAYAGVMQFKEKYLAKDRSTDQIYETPQILYMLVAMCLHQDEKTDRIAKVKNFYDVT 194 Query: 711960 SSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADDLDGIYEALKENALLSKFAGGLGNDWTR 712139 S TP L T Q SSC D+LD I G+G + Sbjct: 195 SLGKLSLPTPILAGVRTPTRQFSSCVKIESGDELDSINATASSIVDYISKRAGIGINGGA 254 Query: 712140 VRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLDIEEFLELR 712319 +RA GS I+ + G++PF K + +QGG R GA Y WHL++E+ L L+ Sbjct: 255 IRAEGSRIRSGEVRHTGIIPFWKYFQTAVKSCSQGGVRGGAATLYYPMWHLEVEKILVLK 314 Query: 712320 KNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPST----CPDLHDKFGAEFEAAY 712487 N G + R ++ I LF +R+ TLFSP DL K +F+ Y Sbjct: 315 NNKGVEENRIRQLDYGIQINKLFFERLKNDDYITLFSPDVQNGELYDLFYKDPVKFKELY 374 Query: 712488 TAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSS 712667 E++ + K+I A++L+ TG + F D NV S + + Sbjct: 375 EMLENEPWCRK----KRIKASELFNLFAQERTGTGRIYPMFVD--NVNSATPYKEPIRMG 428 Query: 712668 NLCTEITLNT 712697 NLC EI L T Sbjct: 429 NLCIEIALPT 438 >ref|YP_006944.1|NAD-dependent DNA ligase, subunit A Length = 323 Score = 124 bits (310), Expect = 6e-26 Identities = 99/284 (34%), Positives = 138/284 (48%), Gaps = 5/284 (1%) Frame = -1 Query: 2536245 KFDGLAISLRYEQGVFVQASTRGDGTTGEDVTENVRTIRSIPLKLKGKHVPAVLDVRGEV 2536066 K DG AISL Y G FVQA TRG+G G DVT NVR + +IP K+ K VP + GEV Sbjct: 78 KLDGCAISLLYINGEFVQALTRGNGILGNDVTSNVRLL-NIPKKISQK-VPT--QITGEV 133 Query: 2536065 LMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKITAQR----PLSFFAYGIGV- 2535901 L+ K E N RN A+G++ DS QR L F AYGI Sbjct: 134 LITK----------------EVENKRNFASGAINLKDSDDFVQRIGEGGLIFVAYGIQCS 177 Query: 2535900 LDGMPMLDTHSALLDWYESLGLPVNREREVVQGAEGLLGFFRKIGEKRESLPYDIDGVVY 2535721 + + + + + + W E+ E + FF+ I DG V Sbjct: 178 AESVGITEAYLKDMLWLEN---------ENFLTVVNVRSFFKWI---------PTDGKVV 219 Query: 2535720 KVNRRDEQERLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVG 2535541 ++N ++ R G+ ++ PR A A K + +T L ++ QVG +G +TPV EPV + Sbjct: 220 RINDNNKFFREGWTNKFPRGAFAIKEDEEGEITTLTKVEWQVGASGKVTPVGYFEPVIID 279 Query: 2535540 GATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLD 2535409 AT+ ATL+N D + D+ IG + V RAG VIP +V + D Sbjct: 280 DATIVKATLNNVDYINSLDLEIGCQIRVIRAGGVIPCIVERVYD 323 >ref|YP_006926.1|putative PhoH-like protein Length = 250 Score = 124 bits (310), Expect = 6e-26 Identities = 64/188 (34%), Positives = 106/188 (56%), Gaps = 2/188 (1%) Frame = +1 Query: 3303166 FDDPIVQLDASEPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVTLGVGPAGTGKTY 3303345 +++ ++Q D S P K L G+ Q+ Y+ I ++ VT+G+G GTGKT+ Sbjct: 21 YENNVIQADFSNDYANPVAK------SLVGKNREQKSYINMIKNNTVTVGIGEPGTGKTF 74 Query: 3303346 LAVACAVDALE--RDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLG 3303519 + A L +++++L RP G+ LG LPGDLA+K++P+L P+ D + +G Sbjct: 75 IPSVLAAQELVDIHSDIEQVILVRPNEPLGKSLGMLPGDLAEKLEPWLEPIADGMKWAIG 134 Query: 3303520 FDKTAKMFERQMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVT 3303699 ERQ I+ + + RGRT N++++I+DEAQN + E M LTR+G + ++ Sbjct: 135 DHAYKGYVERQKIKFLAIEHARGRTFNNSYVIVDEAQNISVEAMVCLLTRVGQDCRLIIC 194 Query: 3303700 GDTSQVDL 3303723 GD +Q D+ Sbjct: 195 GDIAQKDI 202 Score = 92.8 bits (229), Expect = 1e-16 Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 1/189 (0%) Frame = +3 Query: 2359998 ITARNREQNFALNLLMNPEIDFVTLLGQAGTGKTXXXXXXXXXXXXD-DKRYNEIIVTRA 2360174 + +NREQ +N++ N + +G+ GTGKT D ++I+ R Sbjct: 42 LVGKNREQKSYINMIKNNTV--TVGIGEPGTGKTFIPSVLAAQELVDIHSDIEQVILVRP 99 Query: 2360175 TVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQKTDDAAGEWGRAATQELIRSRLKVKS 2360354 P+G+ +G LPG EK++PW+ D ++ A G+ E R ++K + Sbjct: 100 NEPLGKSLGMLPGDLAEKLEPWLEPIADGMKW------AIGDHAYKGYVE--RQKIKFLA 151 Query: 2360355 MNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSG 2360534 + RGRTF + Y+I+DEAQN++ + M L+TR G +++ G+IAQ D +G SG Sbjct: 152 IEHARGRTFNNSYVIVDEAQNISVEAMVCLLTRVGQDCRLIICGDIAQKD----IKGDSG 207 Query: 2360535 LTYVVDRFK 2360561 L +++ ++ Sbjct: 208 LALLMEVYE 216 >ref|NP_944928.1|putative thymidylate synthase Length = 299 Score = 123 bits (308), Expect = 1e-25 Identities = 89/337 (26%), Positives = 150/337 (44%), Gaps = 17/337 (5%) Frame = +2 Query: 1279139 YLDLVRTILDTGTWQENRTGIRTISMPGAMLRFDLQQGFPAVTTKKLAFKSAIGELVGFL 1279318 Y +++ +L G + RTG + RFD++ GFP +T+K++ + IGE + FL Sbjct: 8 YKNILNHVLSVGELRTTRTGDVISAFAPPQFRFDMRTGFPLLTSKQVFTRQVIGEALWFL 67 Query: 1279319 RASRSAADFRALGCKVWDANANEN--------AQWLANPYRQGVDDLGD----VYGVQWR 1279462 ++ R + W N E +WL++ Y D L D +YGVQWR Sbjct: 68 NGENKLSELRY---RTWGENDGERWTIWSDDFKRWLSSNYSSEQDWLEDAGGRIYGVQWR 124 Query: 1279463 QWPGYKVLDAGADAQIDDATRRGFRIVTRFDEDGAPKVLLYKAIDQLRQCLDTIMENPAD 1279642 + G+ +DQL + + + D Sbjct: 125 NFEGHNGC----------------------------------VVDQLETLVTKMKGDITD 150 Query: 1279643 RRILFHAWNPAVL--DQIALPACHLLYQ-FLPNATKREISLCLYIRSNDVGLGTPFNLTE 1279813 R +L +AWN A + + +AL CH+++Q ++ N + E+ L Y RS D LG PFN+ Sbjct: 151 RYMLVNAWNAADIAANSMALAPCHVMFQIYITN--EGEVDLQWYQRSVDTFLGLPFNIAS 208 Query: 1279814 GAALLELVGRLTGYTPRWFTYFIGDAHIYENQLDMLQRQLTREPYDSPRLEIAERVPEYA 1279993 +LE++ ++TGYTPR+ GD IY+N + + + E + +P EI + + Sbjct: 209 YGFILEVLCKMTGYTPRYLIGVFGDTQIYQNHMKQVYELMNNEEFHAPTFEIGLPLNTLS 268 Query: 1279994 KTGVYAPEWLEQIEPSDF--SLVGYRHHEPLTAPMAV 1280098 L+ + SDF + Y+H + AP++V Sbjct: 269 D--------LKHLTASDFIGGINNYKHAGKIEAPLSV 297 >ref|NP_943883.1|topoisomerase II large subunit Length = 613 Score = 120 bits (302), Expect = 5e-25 Identities = 155/588 (26%), Positives = 248/588 (42%), Gaps = 30/588 (5%) Frame = +1 Query: 149266 ASSIQILEGLEAVRKRPGMYIGDTSDGT----------------GLHHLVFEVLDNSIDE 149397 + ++L E MYIG TS T GL + EV+DNS+DE Sbjct: 2 SQEFKVLSDKEHCLINTDMYIGSTSTETHDVLVDGKFVQIAYVPGLVKITDEVIDNSVDE 61 Query: 149398 ALAG---YCNDIHVTIHADNSISVTDNGRGIPTDVKMNDK--HEPKRSAAEIVMTELHAG 149562 A+ + N I V I DN +SV DNGRG+P + + + P AA T AG Sbjct: 62 AIRTNFEHANQIEVVIK-DNQVSVKDNGRGLPQGMVVTPEGVEVPLPLAA---WTRARAG 117 Query: 149563 GKFDQNSYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKRFMEFHRGVAQDRVLEMVDGV 149742 F + + G +GVG + N S E G V + Sbjct: 118 SNFSADRKTI--GKNGVGSALTNFFSDSF-----------VGETGNGTNTVTVRCTNNAD 164 Query: 149743 EVSPMLVTGDTENRGTEVHFMADPTIFGTVEYHYDILAKRMRELSFLNNGVRIR-LTDLR 149919 EVS G + +GT V F+ D T FG + D +++ + L V +T Sbjct: 165 EVSYTTKAG--KFKGTNVTFVPDFTRFGVFQLDEDF--EQVIQSRLLTLAVNFPPITFKY 220 Query: 149920 SGKEDDFAFAGGVKGFVEFINKTKTNLHPTVFFATGEKDGVGVEVAMQWNDSYNENVLCF 150099 +GK+ + F+ F + ++ N+ ++FFAT E+ Y + L F Sbjct: 221 NGKKVEGKFSKFAAQFGDVVSHNDDNV--SLFFATSEE--------------YRQ--LSF 262 Query: 150100 TNNIPQRDGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETTGDDMREGLSCVLSVK-VP 150276 N + + GG H+ G+ +++ + I ++ K+E ++E L L ++ + Sbjct: 263 VNGVHTKQGGNHVYGVLDSLSDELIPMIK-----RQHKIEINKARIKECLLIGLFIRNLV 317 Query: 150277 EPKFSSQTKDKLVS--SEVRAPVEEVVAKALEEFLLETP--IDAKIICGKIVEXXXXXXX 150444 PK+ QTK++L S +++R + + KAL +L+TP ID I + Sbjct: 318 APKYDGQTKERLSSPWAQIRDHMN-LDYKALARKILKTPEVIDPIIASALAKKEAADKAA 376 Query: 150445 XXXXXEMTRRKGVLDGVGLPGKLADCQEKDPAKCEIYIVEGDSAGGSAKQGRDRKFQAIL 150624 + ++ V V G K +++ EGDSA G + R+ + Q Sbjct: 377 ATKAQKKAKKANVAKHVAAAGL-------GRLKTMLFLAEGDSAIGPFTRFRNEETQGSY 429 Query: 150625 PLRGKVLNVEKARYDKLLSSEQIVTLVTALGCGIGKEDYNLDKLRYHRIIIMTDADVDG- 150801 PLRGK+LNV ++L +++I L+ L + + + Y I IMTDAD DG Sbjct: 430 PLRGKMLNVWNLPDHEVLKNKEIADLLGILNVELRSK----EAPAYTDIAIMTDADQDGK 485 Query: 150802 AHIRTLLLTFLYRQMPDMIERGYVYIAQPPLYKIKAGK--DERYLKDD 150939 I L + F Y+ P E+G ++I + P Y GK D Y +D+ Sbjct: 486 GSIAMLAIAFFYKFWPHWFEQGRIHIVRTPEYISTNGKKTDWSYSRDE 533 Score = 111 bits (278), Expect = 3e-22 Identities = 157/590 (26%), Positives = 243/590 (41%), Gaps = 27/590 (4%) Frame = -3 Query: 2955496 IIQEVIDNASDEALGG---YGKQITVTLHADQSVSVEDDGRGIPFGMH-PEEGV--PVVE 2955335 I EVIDN+ DEA+ + QI V + D VSV+D+GRG+P GM EGV P+ Sbjct: 50 ITDEVIDNSVDEAIRTNFEHANQIEVVIK-DNQVSVKDNGRGLPQGMVVTPEGVEVPLPL 108 Query: 2955334 IVFTRLHXXXXXXXXXXXAYTFSGGLHGVGVSVTNALATRLDVTVWRDGKIAELGFAEGD 2955155 +TR G +GVG ++TN + D + E G Sbjct: 109 AAWTRARAGSNFSADRKTI-----GKNGVGSALTNFFS---------DSFVGETGNGTNT 154 Query: 2955154 VVKPLATQG-----AGRGEKKSGTRVQVWPNPKYFDSPNLPLGELQRLLRSK----AVLL 2955002 V + K GT V P+ F L + +++++S+ AV Sbjct: 155 VTVRCTNNADEVSYTTKAGKFKGTNVTFVPDFTRFGVFQLD-EDFEQVIQSRLLTLAVNF 213 Query: 2955001 PGVEVVLVNEKSGERQTWKYEDGLRGYLLDEMNGSELLIPLFEGE--RFADSRSGDDTFA 2954828 P + T+KY NG ++ EG+ +FA ++ GD Sbjct: 214 PPI-------------TFKY------------NGKKV-----EGKFSKFA-AQFGDVVSH 242 Query: 2954827 EGEGASWVVAWSEEGSLVRESYVNLIPTPAGGTHESGLRDGLYQAVKSFVEL-HNLQPKG 2954651 + S A SEE + S+VN + T GG H G+ D L + ++ H ++ Sbjct: 243 NDDNVSLFFATSEEYRQL--SFVNGVHTKQGGNHVYGVLDSLSDELIPMIKRQHKIEINK 300 Query: 2954650 VKL---LAEDVFARVSFVLSAKVLDPQFQGQIKERLNS-----RDAVKLVSSFSRPALEL 2954495 ++ L +F R ++ P++ GQ KERL+S RD + L + A ++ Sbjct: 301 ARIKECLLIGLFIR-------NLVAPKYDGQTKERLSSPWAQIRDHMNL--DYKALARKI 351 Query: 2954494 WLNQHVEHGKKLAELVIKQAQARTRAGQKVEKRKSSGVAVLPGKLTDCETEDIARNELFL 2954315 V + L K+A + A + +K K + VA K + LFL Sbjct: 352 LKTPEVIDPIIASALAKKEAADKAAATKAQKKAKKANVA----KHVAAAGLGRLKTMLFL 407 Query: 2954314 VEGDSAGGSAKMGRDKEYQAILPLRGKVLNTWETERDRLFANNEVHDISVAIGVDPHSPD 2954135 EGDSA G R++E Q PLRGK+LN W + N E+ D+ + V+ S + Sbjct: 408 AEGDSAIGPFTRFRNEETQGSYPLRGKMLNVWNLPDHEVLKNKEIADLLGILNVELRSKE 467 Query: 2954134 ESVDLSNLRYGKICILSDADVDG-SHIQVLLLTLFFKHFPQLIERGHVCVARPPLFRVDA 2953958 Y I I++DAD DG I +L + F+K +P E+G + + R P + Sbjct: 468 APA------YTDIAIMTDADQDGKGSIAMLAIAFFYKFWPHWFEQGRIHIVRTPEY---I 518 Query: 2953957 PARGKKAAQKLYALDDGELEAILDKLRKDGVRETQWSISRFKGLGEMSAE 2953808 GKK Y+ D+ + DG +W+ KGLG ++ E Sbjct: 519 STNGKKTDWS-YSRDE------FRSKKFDG----KWTHRHIKGLGSLTVE 557 >ref|NP_046713.1|ribunucleotide reductase large subunit Length = 1084 Score = 118 bits (296), Expect = 3e-24 Identities = 71/249 (28%), Positives = 131/249 (52%), Gaps = 1/249 (0%) Frame = +3 Query: 711933 RAIEFYNVLSSFDFMSSTPTLFNSGT-HRSQLSSCYLTTVADDLDGIYEALKENALLSKF 712109 +A+E + + ++ +TPT N+G R ++ SC+L V D L+ I A+ + LSK Sbjct: 135 KAVEEVHTMMKQEYQPATPTFLNAGRKRRGEMVSCFLLEVGDSLNDISRAIDISMQLSKL 194 Query: 712110 AGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWH 712289 GG+ + ++RA G IK ++GVV +K++++ +Q G+R+G+ YL +H Sbjct: 195 GGGVALNLNKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQMGQRQGSGAVYLSVFH 254 Query: 712290 LDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGA 712469 DI +FL+ +K + D+ R ++ +PD F++ E D+ +F P + + ++ Sbjct: 255 PDITDFLDTKKISADEDVRVKTLSIGVVVPDKFIELAREDKDYYMFYPHSVYKEYGQYLD 314 Query: 712470 EFEAAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHV 712649 E + Y++ V ++ K A +L ++ + E+G+P+I F D N P +H+ Sbjct: 315 ELD-INEMYDELVENPRVRKAKG-NARKLLEQLAILRSESGYPYIMFADNVNKVHPNEHI 372 Query: 712650 GVVHSSNLC 712676 V SNLC Sbjct: 373 SKVKFSNLC 381 Score = 73.6 bits (179), Expect = 9e-11 Identities = 85/342 (24%), Positives = 139/342 (40%), Gaps = 11/342 (3%) Frame = +3 Query: 712719 CNLGSVNLVAHLVKQADGSFALDHDKLKRTISVAMRMLDNVID----INYYAVAKARNSN 712886 CNLGS+N+V + Q+ S T+ +A+ L V +N AVA+A N Sbjct: 793 CNLGSMNIVNVMSNQSIAS----------TVRIAIDSLTTVTRKTNIVNAPAVARA---N 839 Query: 712887 LKHRPVGMGIMGFQDCLHLLRTPYASEAAVAFADRSMEAVCYYAYHASTELAEERGR-YS 713063 R +G+G M L Y SE A FA+ V +Y+ S E+A E G Y Sbjct: 840 TLMRSIGLGQMNLHGFLAQNNIAYESEEAKDFANTYFMMVNFYSLQRSMEIARETGETYY 899 Query: 713064 SYRGSLWDRG-----ILPQDTLKLLAEARGGYVEVDTSESLDWTSLRSRIATHGMRNSNC 713228 + GS + G + D + + + + DW L+ + +G+ +S Sbjct: 900 KFDGSTYKSGEYFEKYVTNDYSPQYEKVKKLFGDQHIPNIQDWMKLKEDVMKYGLYHSYR 959 Query: 713229 VAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVAD 713408 AIAPT +IS YV+S+ +G ++ +E + Sbjct: 960 QAIAPTGSIS----------------YVQSSTAGVMPIMERI-----------EERTYGN 992 Query: 713409 LKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGA-SG 713585 K + M + A Y A+++D +V+ + Q+ +DQ S +++ + Sbjct: 993 SKTYYPMPG----LSAQNWFFYKEAYDMDMFKVVDLIATIQQHVDQGISFTLFLKDTMTT 1048 Query: 713586 KKLDEVYKLAWLRGLKTTYYLRTMAATHVEKSTVAHGALNAV 713711 + L+ + A RG+KT YY RT K T G L+ V Sbjct: 1049 RDLNRIDLYAHHRGIKTLYYART-------KDTTQEGCLSCV 1083 >ref|NP_046572.1|ABC transporter Length = 705 Score = 115 bits (288), Expect = 2e-23 Identities = 82/298 (27%), Positives = 148/298 (49%) Frame = -2 Query: 3326906 VFILWRATQGVLAGKLTLGDLVLINTFMLQLYIPLNFLGVVYRELKQSLTDMDRMFGLLS 3326727 + ILW T+ VL ++LG L+ INT L L+ + + +L+Q+ R F +++ Sbjct: 404 IIILWVGTRQVLNDSMSLGTLLFINTLAAFLLSSLDRILSMQSDLQQAHVASIRFFDVVN 463 Query: 3326726 AAKEVADLPDAQPLAVAGAQVRFEHVNFAYEPARQILHDVSFTIDAGTTTAVVGHSGSGK 3326547 + + L ++ ++N +P R I+ D++ +D ++G SG+GK Sbjct: 464 YPVQQDSNENLTELDFI-QNIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGK 522 Query: 3326546 STLSRLLFRFYDLDRQAGGAIRIDGQDIRDVRQDSLRASIGIVPQDTVLFNDSIYYNIAY 3326367 ST ++ L + Y + ++ I ++G DI S+R I + ++ LF +I N+ Sbjct: 523 STFAKSLSKLYKVPDKS---IYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTIKENLCM 579 Query: 3326366 GRPTATRDEVIAAARAAHIHDFIESLPKGYDTPVGERGLKLSGGEKQRVAIARTLLKDPP 3326187 G ++E+ A + H+FI +L K Y + E G LS G+KQR+A+AR +L P Sbjct: 580 GE-IFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQ 638 Query: 3326186 VLLFDEATSALDSRSERAIQHELDQIARHRTTLVIAHRLSTVVHAQQILVMDHGRIVE 3326013 VL+ DE+ S +D + + I L ++ ++I H + + LV + RI+E Sbjct: 639 VLILDESLSNIDPDNTKLIYETLHRM--DCLIILITHNDPSNFKYNKKLVFRNNRIIE 694 Score = 96.7 bits (239), Expect = 1e-17 Identities = 99/494 (20%), Positives = 208/494 (42%), Gaps = 4/494 (0%) Frame = -2 Query: 2893979 VPMAVIGLALVRGVSQYASNYLLNYVSNRILLQLRLEMFQRMLHTGASFFQRETASTVIN 2893800 + + I + L+R + + +YL+ +S ++ ++ F ++ +FF+ VI+ Sbjct: 208 ITLIFISMVLIRCIFDFVRSYLIIKLSYKVDKEMSNVYFNKVTKLPINFFENREDGEVIS 267 Query: 2893799 AIVFEVNQILSVLTGVMVTLVRDSLTVIFLLGYLFYLNWRLTLIVAVILPGIGWLVSKIN 2893620 + I + VT + D + ++ L L+ N L L + + + + L Sbjct: 268 RFNDGI-YIKDFFSANFVTAIIDIILILGLGVILYRTNNILFLTIILPILLLSCLAILFF 326 Query: 2893619 RRLRRLNREHQTLTNELSYIVEETVGGYKVVKVHNGEAYEMDRF-TQMSKRLRGY--AMR 2893449 L++ N++ + + ++ + V N ++ +++F K+L + Sbjct: 327 DHLKKKNQKLMEDKAKSTSLLINFLKNMTTVYSLNKTSFFLEKFHLTYDKQLNSTFSVAK 386 Query: 2893448 MTISGGLAQPLTQFLXXXXXXXXXXXXXVQSSNDQTTVGGFVAFVTSMLLVISPLKHLID 2893269 IS + + L Q Q ND ++G + T ++S L ++ Sbjct: 387 AVISNEILKGLIQ---NSFTIIILWVGTRQVLNDSMSLGTLLFINTLAAFLLSSLDRILS 443 Query: 2893268 VNQPLQRGMTAAELIFGLIDEPAEPQGGGRPLAQSRGDIEFRNVTFDYGAAE-RPTLDRI 2893092 + LQ+ A+ F +++ P + Q L + + V + GA R ++ I Sbjct: 444 MQSDLQQAHVASIRFFDVVNYPVQ-QDSNENLTELDFIQNIKTVNLNIGADPMRYIVEDI 502 Query: 2893091 SFKVAPGEMIALAGPSGSGKTTLVNLLPRFFDPTDGAILVDGVPVADYDLHALRSQMAMV 2892912 + + + + + G SG+GK+T L + + D +I ++G+ + YD ++R ++ + Sbjct: 503 NLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYI 562 Query: 2892911 SQDVVLFNDTIAANVAYGQTPXXXXXXXXXXXXXXXXXXXAMPDGLDTLVGGNGMRLSGG 2892732 ++ LF TI N+ G+ + + NG LS G Sbjct: 563 DENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTG 622 Query: 2892731 QRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALERLMEGRTTLVIAHRLSTIER 2892552 Q+QRLA+ARAI +LILDE+ S +D ++ + + L R+ ++I H + + Sbjct: 623 QKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM--DCLIILITHNDPSNFK 680 Query: 2892551 ADRILVLEAGKIVE 2892510 ++ LV +I+E Sbjct: 681 YNKKLVFRNNRIIE 694 Score = 96.3 bits (238), Expect = 1e-17 Identities = 60/202 (29%), Positives = 107/202 (52%) Frame = -3 Query: 1350793 RAILDHFDLHIEPGQRVGLIGKSGAGKSTVLALLQRFYDTQDGAVQVDGQDVKTITQDSL 1350614 R I++ +L ++ +V +IG+SG GKST L + Y D ++ ++G D+ S+ Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI 555 Query: 1350613 RHAIALVPQDISLLHRTIYDNIAYGRPEATREEVLAAARDARCAEFIEAMPEGYDTIVGD 1350434 R I + ++ L TI +N+ G + E+ A ++C EFI + + Y + + Sbjct: 556 RKRIVYIDENPFLFKGTIKENLCMGEI-FDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 1350433 RGVKLSGGQRQRIAIARAILKDAPILLLDEATSALDSASEEAIQSALDRLMVGRTVIAIA 1350254 G LS GQ+QR+A+ARAIL +L+LDE+ S +D + + I L R+ +I I Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM--DCLIILIT 672 Query: 1350253 HRLSTLRNFDRIIVMNNGKVID 1350188 H + +++ +V N ++I+ Sbjct: 673 HNDPSNFKYNKKLVFRNNRIIE 694 Score = 67.8 bits (164), Expect = 5e-09 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 6/185 (3%) Frame = +2 Query: 1254308 LRNINLTIPQGEVFGIIGRSGAGKSTLVRTINLLTRPTEGNVVVGGRDLTMLPAGALREA 1254487 + +INL + + + IIG SG GKST ++++ L + + ++ + G D+ ++R+ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 1254488 RREIGMIFQHFN-LLSSRTVFDNVALPLELAGASRAEIDAAVLPLLDLVGLSAQKDRYP- 1254661 +++ N L T+ +N+ + E+ + E + + + ++ Y Sbjct: 559 -----IVYIDENPFLFKGTIKENLCMG-EIFDQNEIENACIMSQCHEFICNLDKQYSYKL 612 Query: 1254662 ----SQISGGQKQRVGIARALASQPKVLLSDEATSALDPETTRSILDLLKRINRELGLTI 1254829 S +S GQKQR+ +ARA+ QP+VL+ DE+ S +DP+ T+ I + L R++ I Sbjct: 613 SENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMD----CLI 668 Query: 1254830 VLITH 1254844 +LITH Sbjct: 669 ILITH 673 Score = 67.8 bits (164), Expect = 5e-09 Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 16/149 (10%) Frame = -2 Query: 521993 LVIGKSGSGKSTFMRALAGLWPFGDGAI-----------DAPVGARMMFVPQTSYLPIGT 521847 L+IG+SG+GKSTF ++L+ L+ D +I + R++++ + +L GT Sbjct: 513 LIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGT 572 Query: 521846 LKAALTYPATPDTFSDDACRDALRACRLEDYVDRLDETAHWTRV-----LSPGEQQRLAG 521682 +K L + F + +A + +++ LD+ + LS G++QRLA Sbjct: 573 IKENL---CMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLAL 629 Query: 521681 ARVLLHKPDFLFLDEATSALDADNEARLY 521595 AR +LH+P L LDE+ S +D DN +Y Sbjct: 630 ARAILHQPQVLILDESLSNIDPDNTKLIY 658 Score = 67.4 bits (163), Expect = 7e-09 Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 7/211 (3%) Frame = -1 Query: 1931694 DERMFSIGPINLTIQPGELLFIVGGNGSGKTTLAKVLTGLYEPEEGTIEVDGRTIGWRER 1931515 D + + INL + + + I+G +G+GK+T AK L+ LY+ + +I ++G I + Sbjct: 493 DPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDH 552 Query: 1931514 AAYRQRFSAVFNDFHLFDALL-------GIVDPDDPSRAQADARANALIAKLALDHKVKV 1931356 + R+R + + LF + I D ++ A ++ + I L + K+ Sbjct: 553 LSIRKRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKL 612 Query: 1931355 VDGAFSTRALSTGQRKRLALVVAYLEDRPFYLFDEWAADQDPSFKAVFYEQLLPELRARG 1931176 + + LSTGQ++RLAL A L + DE ++ DP + YE L Sbjct: 613 SENGSN---LSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYE----TLHRMD 665 Query: 1931175 KAVIVITHDDRYFDLADRLLKLDNGKIVSDT 1931083 +I+ITH+D ++ L N +I+ + Sbjct: 666 CLIILITHNDPSNFKYNKKLVFRNNRIIESS 696 Score = 65.9 bits (159), Expect = 2e-08 Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 7/212 (3%) Frame = -1 Query: 3192948 VLRNVNLDIADGEFVVFVGPSGCGKSTLMRMIAGLEDISSGDLLIDGAKVN--DVPSAKR 3192775 ++ ++NL + + V+ +G SG GKST + ++ L + + ++G +N D S ++ Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 3192774 GIAMVFQSYALYPHMTLYDNMAFGLKLAGAKKPEIDQAVKQAAKIL-----HIDHLLDRK 3192610 I + ++ L+ T+ +N+ G ++ + E + Q + + + L Sbjct: 558 RIVYIDENPFLFKG-TIKENLCMG-EIFDQNEIENACIMSQCHEFICNLDKQYSYKLSEN 615 Query: 3192609 PKQLSGGQRQRVAIGRAITRKPKVFLFDEPLSNLDAALRVKMRLEFARLHDELKTTMIYV 3192430 LS GQ+QR+A+ RAI +P+V + DE LSN+D +L + LH + +I + Sbjct: 616 GSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD---NTKLIYETLH-RMDCLIILI 671 Query: 3192429 THDQVEAMTLADKIVVLSGGAVQQVGTPNELY 3192334 TH+ K+V + ++ + N+ Y Sbjct: 672 THNDPSNFKYNKKLVFRNNRIIESSYSENKEY 703 Score = 63.5 bits (153), Expect = 1e-07 Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 9/205 (4%) Frame = +3 Query: 3656367 VDNVNLTIAKNELFALLGSSGCGKSTLLRMLAGLETATSGKIFVDGEDLASLP--PYRRP 3656540 V+++NL + + + ++G SG GKST + L+ L I+++G D+ R+ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 3656541 VNMMFQSYALFPHMTVESNVAFGLKQEGTPKNEIKER--VADALALV-----QMSKYAQR 3656699 + + ++ LF T++ N+ G E +NEI+ ++ + Q S Sbjct: 559 IVYIDENPFLFKG-TIKENLCMG---EIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 3656700 KPHQLSGGQQQRVALARSLVKRPKLLLLDEPMSALDKKIRQKTQLELVNIIEKVDVTCVM 3656879 LS GQ+QR+ALAR+++ +P++L+LDE +S +D T+L + + ++D ++ Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKL-IYETLHRMDCLIIL 670 Query: 3656880 VTHDQEEAMTMASRLAVMSEGKIVQ 3656954 +TH+ +L V +I++ Sbjct: 671 ITHNDPSNFKYNKKL-VFRNNRIIE 694 Score = 62.8 bits (151), Expect = 2e-07 Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 4/205 (1%) Frame = +3 Query: 1551501 IEVNNLNFFYNKF-HALKNINLSIPEGKVTAFIGPSGCGKSTLLRTFNKMFALYPEQRAE 1551677 I+ NLN + + +++INL + IG SG GKST ++ +K++ + + Sbjct: 483 IKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKV-----PD 537 Query: 1551678 GEIMMDGENLLTTKRDISLLRARIGMVFQKPTPFPMSIYDNIAFGVKMFEKLTRSEMDDR 1551857 I ++G ++ + D +R RI + + P F +I +N+ G E ++E+++ Sbjct: 538 KSIYLNGLDI--NRYDHLSIRKRIVYIDENPFLFKGTIKENLCMG----EIFDQNEIENA 591 Query: 1551858 VEWALTKAALWNEVKD---KLNXXXXXXXXXXXXRLCIARGIAIRPEVLLLDEPCSALDP 1552028 + + N K KL+ RL +AR I +P+VL+LDE S +DP Sbjct: 592 CIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP 651 Query: 1552029 ISTGRIEELIAELKSDYTVVIVTHN 1552103 +T I E + + D ++++THN Sbjct: 652 DNTKLIYETLHRM--DCLIILITHN 674 Score = 60.8 bits (146), Expect = 6e-07 Identities = 48/204 (23%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Frame = +3 Query: 1147602 VLKGVDIEIEDGQFLILVGGSGCGKSTLLNMIAGLETVTSGEICIDGKVVN---DLSPKD 1147772 +++ +++ ++ ++++G SG GKST ++ L V I ++G +N LS + Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 1147773 RDIAMVFQSYALYPSMTVRENISFGLNIRKVPKSEQQQIVDRVSQML-----QIQHLLDR 1147937 R I + ++ L+ T++EN+ G I + E I+ + + + Q + L Sbjct: 558 R-IVYIDENPFLFKG-TIKENLCMG-EIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 1147938 KPGQLSGGQRQRVAMGRALARDPSLFLFDEPLSNLDAKLRIEMRAEIKLLHQRLGTTIVY 1148117 LS GQ+QR+A+ RA+ P + + DE LSN+D + + LH R+ I+ Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD---NTKLIYETLH-RMDCLIIL 670 Query: 1148118 VTHDQIEAMTLGDRIAVMKDGVVQ 1148189 +TH+ ++ + +++ Sbjct: 671 ITHNDPSNFKYNKKLVFRNNRIIE 694 Score = 57.4 bits (137), Expect = 7e-06 Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 9/213 (4%) Frame = -1 Query: 2233455 VRSVNLTVRQGELFALLGSSGCGKSTLLRMLAGLETVTSGKILIDGEDLAQMP--PYKRP 2233282 V +NL + + + ++G SG GKST + L+ L V I ++G D+ + ++ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 2233281 VNMMFQSYALFPHMSVESNVAFGLKQEGTPKAELKER--VASALELV-----QMSKYAKR 2233123 + + ++ LF +++ N+ G E + E++ ++ E + Q S Sbjct: 559 IVYIDENPFLFKG-TIKENLCMG---EIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 2233122 KPHQLSGGQQQRVALARSLVKRPKLLLLDEPMSALDKQIRQRTQIELVNILNKVGVTCIM 2232943 LS GQ+QR+ALAR+++ +P++L+LDE +S +D T++ + L+++ I+ Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKL-IYETLHRMDCLIIL 670 Query: 2232942 VTHDQEEAMTMANRLAVMSEGQIVQIGSPNEVY 2232844 +TH+ +L + I S N+ Y Sbjct: 671 ITHNDPSNFKYNKKLVFRNNRIIESSYSENKEY 703 Score = 56.2 bits (134), Expect = 2e-05 Identities = 47/203 (23%), Positives = 99/203 (48%), Gaps = 13/203 (6%) Frame = -1 Query: 3087432 IKGLQVNYGGIQA---VKGVDMEVRQGELVTLIGANGAGKTTTMKAITGLKAYSAGDIEY 3087262 IK + +N G V+ +++ + + + V +IG +G GK+T K+++ L I Sbjct: 483 IKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYL 542 Query: 3087261 DGKSIKGMPTHELLKRGLAMVPEGRGIFARMSIIENMQMG----------AYLRNDTEQI 3087112 +G I H +++ + + E +F + +I EN+ MG A + + + Sbjct: 543 NGLDINRYD-HLSIRKRIVYIDENPFLF-KGTIKENLCMGEIFDQNEIENACIMSQCHEF 600 Query: 3087111 KKDVDRMFGFFPRLKERATQLAGTLSGGEQQMLAMSRAILSKPKLLLLDEPSMGLSPIMV 3086932 ++D+ + + + ++ LS G++Q LA++RAIL +P++L+LDE + P Sbjct: 601 ICNLDKQYSY------KLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNT 654 Query: 3086931 EKIFEVVREISKEGITVLLVEQN 3086863 + I+E + + ++L+ N Sbjct: 655 KLIYETLHRMD---CLIILITHN 674 Score = 55.8 bits (133), Expect = 2e-05 Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 4/157 (2%) Frame = -1 Query: 8577 VSFSLKRGKTLAVVGESGCGKSTLARQLTMIETPTSGSLTIDGKNVAGASRETVADLRRR 8398 ++ L R + ++GESG GKST A+ L+ + S+ ++G ++ +R +R+R Sbjct: 502 INLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDI---NRYDHLSIRKR 558 Query: 8397 VQMVFQNPFASLNPRKTVEQTLSEPLEINANLTAAERAQRIAQIMRTV-GLRPEHAKRYP 8221 + + +NPF + T+++ L + N E A ++Q + L +++ + Sbjct: 559 IVYIDENPFLF---KGTIKENLCMGEIFDQN--EIENACIMSQCHEFICNLDKQYSYKLS 613 Query: 8220 HM---FSGGQRQRVAIARAMILDPRIVVADEPVSALD 8119 S GQ+QR+A+ARA++ P++++ DE +S +D Sbjct: 614 ENGSNLSTGQKQRLALARAILHQPQVLILDESLSNID 650 Score = 55.5 bits (132), Expect = 3e-05 Identities = 45/182 (24%), Positives = 94/182 (51%), Gaps = 10/182 (5%) Frame = +2 Query: 531698 LKGVSLSVEEGEFFGLLGPNGAGKTTLISILAGLARADEGSISVRGHDVVK-DFRGARRA 531874 ++ ++L ++ + ++G +G GK+T L+ L + + SI + G D+ + D R+ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 531875 LGVVPQELVFDPFF---TVRETLRIQSGYFGLRRNDDWI----DEVMANLD--LTEKADA 532027 + + + +PF T++E L + + + I E + NLD + K Sbjct: 559 IVYIDE----NPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSE 614 Query: 532028 NMRALSGGMKRRVLVAQALVHRPPVIVLDEPTAGVDVELRQTLWKFISRLNREGHTIVLT 532207 N LS G K+R+ +A+A++H+P V++LDE + +D + + +++ + R++ I+L Sbjct: 615 NGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMD---CLIILI 671 Query: 532208 TH 532213 TH Sbjct: 672 TH 673 Score = 54.7 bits (130), Expect = 4e-05 Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 8/194 (4%) Frame = +1 Query: 3410278 RTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEISLNGSSISL---LPI 3410448 R +V+D++L + + V ++G +G GK+T + L + I LNG I+ L I Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI 555 Query: 3410449 HKRASLGLSYLPQEASVFRKLTVEENIRAVLELQHGE--DGKRLSKDAISSRAEAL---L 3410613 KR + Y+ + +F K T++EN L GE D + I S+ L Sbjct: 556 RKR----IVYIDENPFLF-KGTIKEN------LCMGEIFDQNEIENACIMSQCHEFICNL 604 Query: 3410614 DELQIGHLRENPALSLSGGERRRVEIARALATNPNFILLDEPFAGVDPIAVLEIQKIVKF 3410793 D+ L EN + +LS G+++R+ +ARA+ P ++LDE + +DP + I + Sbjct: 605 DKQYSYKLSENGS-NLSTGQKQRLALARAILHQPQVLILDESLSNIDPD---NTKLIYET 660 Query: 3410794 LKQRNIGVLITDHN 3410835 L + + +++ HN Sbjct: 661 LHRMDCLIILITHN 674 Score = 53.5 bits (127), Expect = 1e-04 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 7/189 (3%) Frame = -1 Query: 407556 VLTDITLDIGEGDFVALMGPSGSGKSTLLNLVAGIDRPDSGELRVGGLDISLLAEAQLAE 407377 ++ DI L + D V ++G SG+GKST ++ + + + + GLDI+ + + Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 407376 WRAANVG---FIFQFYNLMPVLTAFENVELPLMLTHLSXXXXXXXXXXXLDMVNLGDRTS 407206 R + F+F+ T EN+ + + + NL + S Sbjct: 558 -RIVYIDENPFLFKG-------TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYS 609 Query: 407205 HYPSE----LSGGQQQRVAIARALITDPVLIVADEPTGDLDRASATDVLAMLQRMNAELG 407038 + SE LS GQ+QR+A+ARA++ P +++ DE ++D + + L RM+ Sbjct: 610 YKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMDC--- 666 Query: 407037 KTIIMVTHD 407011 II++TH+ Sbjct: 667 -LIILITHN 674 Score = 53.5 bits (127), Expect = 1e-04 Identities = 45/182 (24%), Positives = 90/182 (49%), Gaps = 10/182 (5%) Frame = -3 Query: 198475 LRDFSMSVARGEFIAIVGPTGCGKSTTLNLITGLLKPVSGEVRVMGRPV---DGIDPRIG 198305 + D ++ + R + + I+G +G GKST ++ L K + + G + D + R Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 198304 FVFQADAVFPWRNVI-DNVAAGPLFRGRSKDVA--YAQAEEWIRKVGLDKFTKHYPHQ-- 198140 V+ + F ++ I +N+ G +F + A +Q E+I LDK + + Sbjct: 559 IVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFI--CNLDKQYSYKLSENG 616 Query: 198139 --LSGGMRKRVALAQTFINQPEILLMDEPFSALDMQTRTLMQDELLQLWSANKGSVVFVT 197966 LS G ++R+ALA+ ++QP++L++DE S +D L+ + L ++ ++ +T Sbjct: 617 SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM----DCLIILIT 672 Query: 197965 HD 197960 H+ Sbjct: 673 HN 674 Score = 52.8 bits (125), Expect = 2e-04 Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 6/207 (2%) Frame = +1 Query: 505099 DGKQHVLHGIDVEIADGEFIVLVGPSGCGKSTLLRMIAGLETVTDGEIAIGERVVNTLEP 505278 D ++++ I++ + + ++++G SG GKST + ++ L V D I + +N + Sbjct: 493 DPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDH 552 Query: 505279 KD--RDIAMVFQNYALYPHMTVAQN--MGYGLKIRGIERTTIDSRVAA--AAKIXXXXXX 505440 + I + +N L+ T+ +N MG IE I S+ Sbjct: 553 LSIRKRIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYK 611 Query: 505441 XXXXXXXXSGGQRQRVAMGRAIVREPSVFLFDEPLSNLDAKLRVQMRLEIQRLHARLATT 505620 S GQ+QR+A+ RAI+ +P V + DE LSN+D +L + LH R+ Sbjct: 612 LSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD---NTKLIYETLH-RMDCL 667 Query: 505621 SVYVTHDQIEAMTLAQRVIVMNRGYAE 505701 + +TH+ ++++ N E Sbjct: 668 IILITHNDPSNFKYNKKLVFRNNRIIE 694 Score = 50.8 bits (120), Expect = 6e-04 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 6/192 (3%) Frame = -3 Query: 111217 VLHGIDLALQPGSVTALIGPSGSGKSTLLRCVN-LLEVPEAGVLMVGDARIDFSPAHRPV 111041 ++ I+L L +IG SG+GKST + ++ L +VP+ + + G +D + Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNG---LDIN------ 548 Query: 111040 RDAVFAVRRQTGMVFQNFQLFPHLSVVQNVMEGLVTVQRWPXXXXXXXXXXXXEKVGIAD 110861 R ++R++ + +N LF ++ +N+ G + Q E + D Sbjct: 549 RYDHLSIRKRIVYIDENPFLFKG-TIKENLCMGEIFDQN--EIENACIMSQCHEFICNLD 605 Query: 110860 KANAWP-----GTLSGGQQQRVAIARALAPSPQVLLCDEPTSALDPELSVEVVEVLRQLA 110696 K ++ LS GQ+QR+A+ARA+ PQVL+ DE S +DP+ + + E L Sbjct: 606 KQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLH--- 662 Query: 110695 REGTTMLMATHD 110660 R +++ TH+ Sbjct: 663 RMDCLIILITHN 674 Score = 50.8 bits (120), Expect = 6e-04 Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 6/156 (3%) Frame = +3 Query: 1680096 VLDGVDLALAPGETLALLGRNGSGRSTLAKAVMGLVRTAG-SVRIGGAECVGARTFEIAR 1680272 +++ ++L L + + ++G +G+G+ST AK++ L + S+ + G + I + Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 1680273 RGVAYVAESRDVFPLLTVRDNLRLGLRGASGAAEHTALERLFDRF-----PLLAARADVK 1680437 R + Y+ E+ +F T+++NL +G E+ + F + + Sbjct: 558 R-IVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSEN 615 Query: 1680438 AGRLSGGEQQVLALVRALAGRPRVLIVDEPAEGLAP 1680545 LS G++Q LAL RA+ +P+VLI+DE + P Sbjct: 616 GSNLSTGQKQRLALARAILHQPQVLILDESLSNIDP 651 Score = 50.8 bits (120), Expect = 6e-04 Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 5/220 (2%) Frame = -1 Query: 2577549 VDDVTLAIGRGERVALVGESGSGKSVTALSILRLLRDADVSGTIRFAGQDLVAKSEREMR 2577370 V+D+ L + R ++V ++GESG+GKS A S+ +L + D S I G D+ +R Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKS--IYLNGLDINRYDHLSIR 556 Query: 2577369 GLRGSDIAMIFQEPMTALNPLYTIGVQIGETIVLHDGVSAVEARKRAIALLARTGIAEPE 2577190 I I + P + I E + + + E I I + Sbjct: 557 ----KRIVYIDENP-------FLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLD 605 Query: 2577189 K----RVDSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVDLLLELQ 2577022 K ++ LS GQ+QR +A A+ +P++L+ DE + +D I + L Sbjct: 606 KQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL---- 661 Query: 2577021 REEAEKRGMAILLITHDLNLVRHFA-DRVAVMEHGRLVES 2576905 + I+LITH N +F ++ V + R++ES Sbjct: 662 ----HRMDCLIILITH--NDPSNFKYNKKLVFRNNRIIES 695 Score = 50.4 bits (119), Expect = 8e-04 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%) Frame = -2 Query: 1872590 TVRENLLVFGRYFGMSAQAAHALVKPLLEF-AKLENKADAKVGE----LSGGMKRRLTLA 1872426 T++ENL + G F + ++ EF L+ + K+ E LS G K+RL LA Sbjct: 572 TIKENLCM-GEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALA 630 Query: 1872425 RALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTH 1872288 RA+++ P VL+LDE + +DP L++E L + I++ TH Sbjct: 631 RAILHQPQVLILDESLSNIDPDNTKLIYETLHRM---DCLIILITH 673 Score = 48.9 bits (115), Expect = 0.002 Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 11/211 (5%) Frame = -1 Query: 2957754 LLDHADFSLEAGERVGLIGRNGAGKSSLLKIVAGLAK-PDDGL------VTRQQELVT-- 2957602 +++ + L+ ++V +IG +G GKS+ K ++ L K PD + + R L Sbjct: 498 IVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRK 557 Query: 2957601 --VYVPQEPEFEPGATVFDAVASGLAHTRELLEEYDSIAHRLADIPEGAEHDALLARMNV 2957428 VY+ + P G T+ + + G E+ ++ + E+ ++++ + Sbjct: 558 RIVYIDENPFLFKG-TIKENLCMG-----EIFDQNE------------IENACIMSQCHE 599 Query: 2957427 LQSSLDAHDAWSWRTRVSMTLAQIGLADVDAPVDALSGGMQKRVALARALVLQPDVLLLD 2957248 +LD + S L++ G LS G ++R+ALARA++ QP VL+LD Sbjct: 600 FICNLDK--------QYSYKLSENG--------SNLSTGQKQRLALARAILHQPQVLILD 643 Query: 2957247 EPTNHLDFDGIRWLEELLVAQRAGLLFITHD 2957155 E +++D D + + E L ++ ITH+ Sbjct: 644 ESLSNIDPDNTKLIYETLHRMDCLIILITHN 674 Score = 48.9 bits (115), Expect = 0.002 Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 11/213 (5%) Frame = +3 Query: 2010669 LDLEIRRGEFIALLGPSGCGKSTALNCIAGLQPLTRGGIWL---DDTRIDVLPPERRGFG 2010839 ++L + R + + ++G SG GKST ++ L + I+L D R D L +R Sbjct: 502 INLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR-IV 560 Query: 2010840 MVFQNYALFPHMSVLDNVGFGLKMRGVPKQETRRRAQQALELVQLVGHE-----GKLPGQ 2011004 + +N LF ++ +N+ G ++ + E Q E + + + + Sbjct: 561 YIDENPFLFKG-TIKENLCMG-EIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSN 618 Query: 2011005 LSGGQQQRVAIARAIVIEPPLVLMDEPLSNLD---TKLRIEMRAEIRRIHTQLERATIYV 2011175 LS GQ+QR+A+ARAI+ +P ++++DE LSN+D TKL E +H +++ I + Sbjct: 619 LSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYE------TLH-RMDCLIILI 671 Query: 2011176 THDQDEALSMADRIVVMKEGVVQQVATPKDVYT 2011274 TH+ ++V +++ + Y+ Sbjct: 672 THNDPSNFKYNKKLVFRNNRIIESSYSENKEYS 704 Score = 46.6 bits (109), Expect = 0.012 Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 15/194 (7%) Frame = +1 Query: 796828 SGSGKSTLIKTVNGLEPFQQGEILVNGQSVGDKKTNLSKLRSKVGMVFQHFELFPHLSIT 797007 SG+GKST K+++ L I +NG + ++ +LS +R ++ + ++ LF +I Sbjct: 518 SGTGKSTFAKSLSKLYKVPDKSIYLNGLDI-NRYDHLS-IRKRIVYIDENPFLFKG-TIK 574 Query: 797008 ENLTLAQVKVLGRGKDEANEKGMKLLDRVGLKAHAHKF---------------PGQLSGG 797142 ENL + ++ + NE ++ + + H+F LS G Sbjct: 575 ENLCMGEIF-------DQNE-----IENACIMSQCHEFICNLDKQYSYKLSENGSNLSTG 622 Query: 797143 QQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMVELAQEGMTMMVVTHEMGFAK 797322 Q+QR+A+ARA+ P ++ DE S +DP+ + + L + ++++TH Sbjct: 623 QKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYET---LHRMDCLIILITHNDPSNF 679 Query: 797323 KVAHRVIFMDKGAI 797364 K +++F + I Sbjct: 680 KYNKKLVFRNNRII 693 Score = 45.8 bits (107), Expect = 0.021 Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 16/143 (11%) Frame = +2 Query: 1847372 RTVLDNVELGIARGSFVAIVGRSGCGKSTLLRLVAGLEQPSSGALETRGEGGGELD---- 1847539 R +++++ L + R V I+G SG GKST + ++ L + ++ G D Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSI 555 Query: 1847540 -TRIMYQDARLLPWK-TVLQNVMLGLGRGARDQARAVL-----DEVGLLERANDWP---- 1847686 RI+Y D +K T+ +N+ +G + A + + + L++ + Sbjct: 556 RKRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSEN 615 Query: 1847687 -AQLSGGQRQRVALARALVHRPQ 1847752 + LS GQ+QR+ALARA++H+PQ Sbjct: 616 GSNLSTGQKQRLALARAILHQPQ 638 Score = 45.1 bits (105), Expect = 0.035 Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 6/191 (3%) Frame = -2 Query: 1408226 RTVVDGLSLALPRGDIGCLLGASGCGKTTVLRAIAGFEPVRMGRIVLDGAPVAAPSLDVP 1408047 R +V+ ++L L R D ++G SG GK+T ++++ V I L+G + D Sbjct: 496 RYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINR--YDHL 553 Query: 1408046 PERRRIGMMFQDYALFPHLSAADNVAFG-LRRMPKAERRMRVAEMLDLVGLADSGNAYP- 1407873 R+RI + ++ LF + +N+ G + + E +++ + + D +Y Sbjct: 554 SIRKRIVYIDENPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKL 612 Query: 1407872 ----HELSGGXXXXXXXXXXXAPSPELLLLDEPFSNLDVDTRERLAFELRDILKRTGHTA 1407705 LS G P++L+LDE SN+D D +L +E L R Sbjct: 613 SENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPD-NTKLIYE---TLHRMDCLI 668 Query: 1407704 ILVTHNQAEAF 1407672 IL+THN F Sbjct: 669 ILITHNDPSNF 679 Score = 45.1 bits (105), Expect = 0.035 Identities = 20/58 (34%), Positives = 40/58 (68%) Frame = -2 Query: 2252804 SDVAPGWKLRVLLAQALFSKPDVLLLDEPTNNLDINSIRWLEHTLNEYNSTMIIISHD 2252631 S+++ G K R+ LA+A+ +P VL+LDE +N+D ++ + + TL+ + +I+I+H+ Sbjct: 617 SNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMDCLIILITHN 674 Score = 44.3 bits (103), Expect = 0.060 Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 5/158 (3%) Frame = +1 Query: 254320 VSVIGPNGAGKSTLLNAIMGALPVAGHASGAVVYRGHDVGA---LPVEQRVARGMCLVPE 254490 V +IG +G GKST ++ V ++ G D+ L + +R+ + E Sbjct: 512 VLIIGESGTGKSTFAKSLSKLYKV---PDKSIYLNGLDINRYDHLSIRKRIV----YIDE 564 Query: 254491 KRELFSTMTVEDNLVLG-AYRRKQAGEANFLDQL-DHVFALFPRLKERRKQAAGTLSGGE 254664 LF T+++NL +G + + + A + Q + + L + + + LS G+ Sbjct: 565 NPFLFKG-TIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQ 623 Query: 254665 RQMLAVGRALMGKPDLLMLDEPSLGLAPLIVKEIFHII 254778 +Q LA+ RA++ +P +L+LDE + P K I+ + Sbjct: 624 KQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL 661 Score = 43.9 bits (102), Expect = 0.079 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 10/76 (13%) Frame = +1 Query: 1373170 VEKQYP-------SHLSGGQQQRVAIARALAMHPDVMLFDEPTSALDPE---LVGEVLKV 1373319 ++KQY S+LS GQ+QR+A+ARA+ P V++ DE S +DP+ L+ E L Sbjct: 604 LDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHR 663 Query: 1373320 MQKLAEEGRTMIVVTH 1373367 M L +I++TH Sbjct: 664 MDCL------IILITH 673 Score = 43.9 bits (102), Expect = 0.079 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 10/76 (13%) Frame = +3 Query: 2985654 VEKQYP-------SHLSGGQQQRVAIARALAMHPDVMLFDEPTSALDPE---LVGEVLKV 2985803 ++KQY S+LS GQ+QR+A+ARA+ P V++ DE S +DP+ L+ E L Sbjct: 604 LDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHR 663 Query: 2985804 MQKLAEEGRTMIVVTH 2985851 M L +I++TH Sbjct: 664 MDCL------IILITH 673 Score = 43.5 bits (101), Expect = 0.10 Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 10/216 (4%) Frame = -2 Query: 3088205 SVKGVNKRFGG---LQALSDVGLEIKEGEIYGLIGPNGAGKTTFFNVITGLYTPDSGEFK 3088035 ++K VN G + D+ L + + +IG +G GK+TF ++ LY Sbjct: 482 NIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIY 541 Query: 3088034 LDGTEYKPTAVHQVAKTGIARTFQNIRLFGGMTALENVMVGRHVRTKHGLLGAVFQTPAE 3087855 L+G + H + I +N LF G T EN+ +G E Sbjct: 542 LNGLDINRYD-HLSIRKRIVYIDENPFLFKG-TIKENLCMG------------------E 581 Query: 3087854 RQEEREIKERAI--ELLEYVGVL--QYADYTSRN---LSYGHQRRLEIARALATDPKLLA 3087696 ++ EI+ I + E++ L QY+ S N LS G ++RL +ARA+ P++L Sbjct: 582 IFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLI 641 Query: 3087695 LDEPAAGMNATEKVELTRLLDKIRSDGRTILLIEHD 3087588 LDE + ++ + L ++ I+LI H+ Sbjct: 642 LDESLSNIDPDNTKLIYETLHRMDC---LIILITHN 674 Score = 42.7 bits (99), Expect = 0.18 Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 4/212 (1%) Frame = +2 Query: 1878899 LDNVSLDFPPGELVALLGPSGCGKTTLLRVIAGLEHADAGQVVLQGLDVASVG--ARDRQ 1879072 +++++L + V ++G SG GK+T + ++ L + L GLD+ + ++ Sbjct: 499 VEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKR 558 Query: 1879073 VGFVFQHYALFRHMTVFENVAFGLRVKPRRERPSESAIRDKVHELLKLV--QLDWLAQRY 1879246 + ++ ++ LF+ T+ EN+ G + + E + I + HE + + Q + Sbjct: 559 IVYIDENPFLFKG-TIKENLCMG-EIFDQNE-IENACIMSQCHEFICNLDKQYSYKLSEN 615 Query: 1879247 PSELSGGXXXXXXXXXXXXVEPKVLLLDEPFGALDAKVRKELRGWLRRLHDDLHISTIFV 1879426 S LS G +P+VL+LDE +D K + L R + I + Sbjct: 616 GSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHR----MDCLIILI 671 Query: 1879427 THDQEEALEVADRIVVLNRGHVEQVGSPQDVY 1879522 TH+ + ++V N +E S Y Sbjct: 672 THNDPSNFKYNKKLVFRNNRIIESSYSENKEY 703 Score = 42.7 bits (99), Expect = 0.18 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 4/194 (2%) Frame = +1 Query: 738619 LMGENGAGKSTLLKILGGEYQPDAGSVLVDGQPVQFXXXXXXXXXXXXVIHQELQYVPDL 738798 ++GE+G GKST K L Y+ S+ ++G + V E ++ Sbjct: 514 IIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDIN--RYDHLSIRKRIVYIDENPFLFKG 571 Query: 738799 TVAENLLLGRLPNAFGWVRKREAKRYVRERLAAMGVDLDPDAKLGR----LSIAQRQMVE 738966 T+ ENL +G + F A + +D KL LS Q+Q + Sbjct: 572 TIKENLCMGEI---FDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLA 628 Query: 738967 ICKALMRNARVIALDEPTSSLSHRETEVLFKLVDDLRAQGRALIYISHRMDEIYRLCNAC 739146 + +A++ +V+ LDE S++ T++++ + L +I I+H ++ N Sbjct: 629 LARAILHQPQVLILDESLSNIDPDNTKLIY---ETLHRMDCLIILITHNDPSNFKY-NKK 684 Query: 739147 TIFRDGRKIASHES 739188 +FR+ R I S S Sbjct: 685 LVFRNNRIIESSYS 698 Score = 42.4 bits (98), Expect = 0.23 Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 2/171 (1%) Frame = -3 Query: 1823230 LMGENGAGKSTLMKILSGAYRADAGGEILIDGTRIDIDGPLAARDAGVAVIYQELCLSPN 1823051 ++GE+G GKST K LS Y+ I ++G I+ L+ R V + Sbjct: 514 IIGESGTGKSTFAKSLSKLYKVP-DKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKG- 571 Query: 1823050 LSVAENIYIGRELRRGNRRWGTIDRAAMARGCEDVLARLSASFGPDTLVD--TLSIAEQQ 1822877 ++ EN+ +G + I+ A + C + + L + + LS ++Q Sbjct: 572 -TIKENLCMGEIFDQNE-----IENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQ 625 Query: 1822876 LVEIARAVHTRARILVMDEPTTPLSSRETEHLFRLIRQLREEGLAIIYISH 1822724 + +ARA+ + ++L++DE + + T+ ++ + ++ II I+H Sbjct: 626 RLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRM---DCLIILITH 673 Score = 41.6 bits (96), Expect = 0.39 Identities = 22/60 (36%), Positives = 37/60 (61%) Frame = -2 Query: 3545681 LSGGMVKRVGIARAIALEPELLFLDEPTAGLDPQASDEFVELIATLHRTLGLTVVMVTHD 3545502 LS G +R+ +ARAI +P++L LDE + +DP D + TLHR + ++++TH+ Sbjct: 619 LSTGQKQRLALARAILHQPQVLILDESLSNIDP---DNTKLIYETLHR-MDCLIILITHN 674 >ref|NP_039614.1|gene IV product Length = 428 Score = 115 bits (287), Expect = 3e-23 Identities = 92/306 (30%), Positives = 142/306 (46%), Gaps = 2/306 (0%) Frame = -3 Query: 222109 DNQQGGMIQADAATNSLIITASDPVYRNLRSVIDQLDARRAQVYIEALIVELASNTQGNL 221930 D+ GG + NSL+++ S V L I +D R QV I++L+ E + + +L Sbjct: 157 DSNGGGNVVDYPGNNSLVVSGSAQVMPALSDFITSIDVAREQVLIQSLMFETSVSNGVDL 216 Query: 221929 GIQWQVASG-QFLGGTNLNPTAGLGNSIIXXXXXXXXXXXXXXXXXXXXXXXGSLTQGLN 221753 +ASG + GG N T+ LG ++ T G + Sbjct: 217 SFALALASGGKVAGGFN---TSALGTALS--------------------------TAGGS 247 Query: 221752 IGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLVTLDNEEAKIVVGQNVPIATGSYSNL 221573 G +F L LQ S++ V+STP ++T + I VGQNVP TG + Sbjct: 248 FG----IFNGNILALSLQAVQSDSNSKVISTPRILTQSGQSGYISVGQNVPFVTGKVTG- 302 Query: 221572 TSGNTNNAFNTYDRRDVGLTLHVKPQITEGGILKLQLYTEDSAVVAGTTSAQTGPTFT-K 221396 + + NN F T +RRDVG++L V P + G L L + T+ ++ + A T + Sbjct: 303 EAASVNNPFQTIERRDVGVSLKVTPVVMGNGQLVLTIDTKADSL---SNQAIASDIITNQ 359 Query: 221395 RSIQSTILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSESKIRAKTNLMVF 221216 R IQ+T+ +G+ ++LGGL+ N S+ VP + IP IG LFRS S + + V Sbjct: 360 RQIQTTVQIKDGQTLLLGGLISSNQFDSDRSVPFMSKIPLIGWLFRSHSDSKDDRTMFVL 419 Query: 221215 LRPVII 221198 L +I Sbjct: 420 LTAHVI 425 Score = 98.2 bits (243), Expect = 4e-18 Identities = 96/402 (23%), Positives = 165/402 (41%), Gaps = 27/402 (6%) Frame = +3 Query: 497631 NIVVGEQVRGTVTL---RLNNVRWRDAFDTLLDTHGLAMSRRGSVIWVTPXXXXXXXXXX 497801 +++V V+G +T+ +NN D F ++L+ +GL + + TP Sbjct: 46 SVIVNPDVKGNITVFNADVNNANIDDFFKSVLNANGLVVVAGNPAVVSTPLTKLASQPSN 105 Query: 497802 XXX--------------MHARAADLEPLASRTFALHYPRAQDVQRLLAGATGQRLLSKRG 497939 A A L R F + R+ DV L S G Sbjct: 106 EETYDDESDGVAYEAVPQSAAPAVPADLTVRNFNVTRVRSSDVLPLAKIFVD----SNGG 161 Query: 497940 AAAAD-PRTNLLFVTDLAPRLDQVASLIEAIDRPSRQVRIEARIVEGEQGFSRNLGARVA 498116 D P N L V+ A + ++ I +ID QV I++ + E +L +A Sbjct: 162 GNVVDYPGNNSLVVSGSAQVMPALSDFITSIDVAREQVLIQSLMFETSVSNGVDLSFALA 221 Query: 498117 LRAQGRPPSGESATFTTGARNALDLAARPLGGFEAATAGFTLFAAPLSRVLDVELSALEA 498296 L + G+ G F T +AL A GG F +F +L + L A+++ Sbjct: 222 LASGGKVAGG----FNT---SALGTALSTAGG------SFGIFNG---NILALSLQAVQS 265 Query: 498297 QGRGQIVSSPRVVTADRVKAIVEQGSEVPY--------QAKVGNGVSGVQFRRATLKLEV 498452 +++S+PR++T + G VP+ A V N ++ R + L+V Sbjct: 266 DSNSKVISTPRILTQSGQSGYISVGQNVPFVTGKVTGEAASVNNPFQTIERRDVGVSLKV 325 Query: 498453 EPQITPDGRVVLDLDVTKDSIGEPTAAGPAI-HTKHVQTRVEVENGGTVAIGGIYEQLNR 498629 P + +G++VL +D DS+ A I + + +QT V++++G T+ +GG+ Sbjct: 326 TPVVMGNGQLVLTIDTKADSLSNQAIASDIITNQRQIQTTVQIKDGQTLLLGGLISSNQF 385 Query: 498630 NDVTRVPLLGKIPFLGALFRHRAQRDQRNELVVFITPTVVDA 498755 + VP + KIP +G LFR + + V +T V+ A Sbjct: 386 DSDRSVPFMSKIPLIGWLFRSHSDSKDDRTMFVLLTAHVIRA 427 Score = 80.9 bits (198), Expect = 6e-13 Identities = 77/324 (23%), Positives = 144/324 (44%), Gaps = 15/324 (4%) Frame = +2 Query: 1798118 TVYNVSVTSGAARALLDGGTSSVNTYGGTTVI---GGASGSLDGHQRAVHAAKTVSGKDG 1798288 TV N +VT + +L V++ GG V+ G S + G + + A Sbjct: 134 TVRNFNVTRVRSSDVLPLAKIFVDSNGGGNVVDYPGNNSLVVSGSAQVMPALSDFI---- 189 Query: 1798289 TTIDASTISGKNVVQVDVRVVEFSRSVLKQAGLNFFKQ--SNGFSFGAFAPTGLTSITGS 1798462 T+ID + QV ++ + F SV L+F S G G F + L + + Sbjct: 190 TSIDVAR------EQVLIQSLMFETSVSNGVDLSFALALASGGKVAGGFNTSALGTALST 243 Query: 1798463 PGGAL-TYNTNVPISSAFNLVVNSVSHGLFADLSILEANNLARVLAQPTLVALSGQSANF 1798639 GG+ +N N+ L L +++++ ++V++ P ++ SGQS Sbjct: 244 AGGSFGIFNGNI----------------LALSLQAVQSDSNSKVISTPRILTQSGQSGYI 287 Query: 1798640 LAGGEIPVPVPQSLGTIS--------IEWKPYGVGLTVTPTVLNPRRIALKVAPESSQLD 1798795 G +P + G + IE + GV L VTP V+ ++ L + ++ Sbjct: 288 SVGQNVPFVTGKVTGEAASVNNPFQTIERRDVGVSLKVTPVVMGNGQLVLTIDTKAD--- 344 Query: 1798796 FVHSITINGVQVPALTTRRA-DTTVELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIG 1798972 S++ + +T +R TTV++ DG++ ++GGLI + VPF+ +P+IG Sbjct: 345 ---SLSNQAIASDIITNQRQIQTTVQIKDGQTLLLGGLISSNQFDSDRSVPFMSKIPLIG 401 Query: 1798973 AFFKNLSYQQSDKELVIIVTPHLV 1799044 F++ S + D+ + +++T H++ Sbjct: 402 WLFRSHSDSKDDRTMFVLLTAHVI 425 Score = 42.4 bits (98), Expect = 0.23 Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 24/209 (11%) Frame = -3 Query: 223144 AAYAQ-VTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLVAERPVPEDQALKTLQS 222968 +A+A+ VTLN N+ + + + TGK++IV+P VKG + V V +S Sbjct: 19 SAFAEPVTLN--NSPVRSFVQWYSSKTGKSVIVNPDVKGNIT-VFNADVNNANIDDFFKS 75 Query: 222967 ALRMQGFALVQDHGVLKVVP----------------EAD-AKLQGVPTYVGNAPQARGDQ 222839 L G +V + + P E+D + VP AP D Sbjct: 76 VLNANGLVVVAGNPAVVSTPLTKLASQPSNEETYDDESDGVAYEAVPQ--SAAPAVPADL 133 Query: 222838 VITQVFELHNESANNLLPVLRPLISPN--NTVTAYPANNTIVVTDYADNVRRIAQIIAGV 222665 + F + ++++LP+ + + N V YP NN++VV+ A + ++ I + Sbjct: 134 TVRN-FNVTRVRSSDVLPLAKIFVDSNGGGNVVDYPGNNSLVVSGSAQVMPALSDFITSI 192 Query: 222664 DSAAGAQVQVVPL----RNANAIDLAAQL 222590 D A QV + L +N +DL+ L Sbjct: 193 D-VAREQVLIQSLMFETSVSNGVDLSFAL 220 >ref|NP_049621.1|gp39 topoisomerase II, large subunit, N-terminal region Length = 516 Score = 113 bits (282), Expect = 1e-22 Identities = 134/521 (25%), Positives = 224/521 (42%), Gaps = 30/521 (5%) Frame = +1 Query: 149269 SSIQILEGLEAVRKRPGMYIGDTSDGT----------------GLHHLVFEVLDNSIDEA 149400 + I+IL +E ++KR GMYIG +++ T GL L+ E++DNS+DE Sbjct: 4 NEIKILSDIEHIKKRSGMYIGSSANETHERFMFGKWESVQYVPGLVKLIDEIIDNSVDEG 63 Query: 149401 LAG---YCNDIHVTIHADNSISVTDNGRGIPTDVKMNDKHE--PKRSAAEIVMTELHAGG 149565 + + N I+VTI +N ++V DNGRGIP + E P AA T AGG Sbjct: 64 IRTKFKFANKINVTIK-NNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAA---WTIPKAGG 119 Query: 149566 KFDQNSYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKRFMEFHRGVAQDRVLEMVDGVE 149745 F + +V+GG++GVG S N S + DG+ + +++ E + G Sbjct: 120 NFGDDKERVTGGMNGVGSSLTNIFSVMF-VGETGDGQNNIVVRCSNGMENKSWEDIPG-- 176 Query: 149746 VSPMLVTGDTENRGTEVHFMADPTIFGTVEY---HYDILAKRMRELSFLNNGVRIRLTDL 149916 + +GT V F+ D F T E + DI R++ L+ + ++ Sbjct: 177 ----------KWKGTRVTFIPDFMSFETNELSQVYLDITLDRLQTLAVVYPDIQFTF--- 223 Query: 149917 RSGKEDDFAFAGGVKGFVEFINKTKTNLHPTVFFATGEKDGVGVEVAMQWNDSYNENVLC 150096 +GK+ F + + E H V E++ + V D + + L Sbjct: 224 -NGKKVQGNFKKYARQYDE---------HAIV----QEQENCSIAVGRS-PDGFRQ--LT 266 Query: 150097 FTNNIPQRDGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETTGDDMREGLSCVLSVK-V 150273 + NNI ++GG H+ AM + I +I +K K++ T ++E L+ V+ V+ + Sbjct: 267 YVNNIHTKNGGHHID---CAMDDICEDLIP--QIKRKFKIDVTKARVKECLTIVMFVRDM 321 Query: 150274 PEPKFSSQTKDKLVS--SEVRAPVEEVVAKALEEFLLETPIDAKIICGKIVEXXXXXXXX 150447 + QTK++L S E+R+ ++ K + L I II + Sbjct: 322 KNMRLIRQTKERLTSPFGEIRSHIQLDAKKISRDILNNEAILMPIIEAALARKLAAEKAA 381 Query: 150448 XXXXEMTRRKGVLDG---VGLPGKLADCQEKDPAKCEIYIVEGDSAGGSAKQGRDRKFQA 150618 K + L GK AD +++ EGDSA G RD++ Sbjct: 382 ETKAAKKASKAKVHKHIKANLCGKDADTT--------LFLTEGDSAIGYLIDVRDKELHG 433 Query: 150619 ILPLRGKVLNVEKARYDKLLSSEQIVTLVTALGCGIGKEDY 150741 PLRGKVLN Y +L ++++ + G +G++ + Sbjct: 434 GYPLRGKVLNSWGMSYADMLKNKELFDICAITGLVLGEKAF 474 Score = 86.3 bits (212), Expect = 1e-14 Identities = 138/517 (26%), Positives = 203/517 (39%), Gaps = 44/517 (8%) Frame = -3 Query: 2955571 IKVLKGLEPVKQRPGMYTRTE-NPLH-------------------IIQEVIDNASDEALG 2955452 IK+L +E +K+R GMY + N H +I E+IDN+ DE + Sbjct: 6 IKILSDIEHIKKRSGMYIGSSANETHERFMFGKWESVQYVPGLVKLIDEIIDNSVDEGIR 65 Query: 2955451 G---YGKQITVTLHADQSVSVEDDGRGIPFGMHPE---EGVPVVEIVFTRLHXXXXXXXX 2955290 + +I VT+ +Q V+VED+GRGIP M E +P +T Sbjct: 66 TKFKFANKINVTIKNNQ-VTVEDNGRGIPQAMVKTPTGEEIPGPVAAWT---IPKAGGNF 121 Query: 2955289 XXXAYTFSGGLHGVGVSVTNALATRLDVTVWRDGKIAELGFAEGDVVKPLATQGAGRG-- 2955116 +GG++GVG S+TN + + E G + ++V + + Sbjct: 122 GDDKERVTGGMNGVGSSLTNIFSVMF---------VGETGDGQNNIVVRCSNGMENKSWE 172 Query: 2955115 ---EKKSGTRVQVWPNPKYFDSPNLPLGELQRLL---RSKAVLLPGVEVVLVNEKSGERQ 2954954 K GTRV P+ F++ L L L ++ AV+ P ++ +G++ Sbjct: 173 DIPGKWKGTRVTFIPDFMSFETNELSQVYLDITLDRLQTLAVVYPDIQFTF----NGKKV 228 Query: 2954953 TWKYEDGLRGYLLDEMNGSELLIPLFEGERFADSRSGDDTFAEGEGASWVVAWSEEGSLV 2954774 ++ R Y DE E E S V S +G Sbjct: 229 QGNFKKYARQY--DE----------------------HAIVQEQENCSIAVGRSPDG-FR 263 Query: 2954773 RESYVNLIPTPAGGTHESGLRDGLYQAVKSFVELHNLQPKGVKLLAEDVFARVSFVLSAK 2954594 + +YVN I T GG H D + + + ++ + K ++ V FV K Sbjct: 264 QLTYVNNIHTKNGGHHIDCAMDDICEDLIPQIK-RKFKIDVTKARVKECLTIVMFVRDMK 322 Query: 2954593 VLDPQFQGQIKERLNS-----RDAVKL-VSSFSRPAL--ELWLNQHVEHGKKLAELVIKQ 2954438 + + Q KERL S R ++L SR L E L +E LA + + Sbjct: 323 NM--RLIRQTKERLTSPFGEIRSHIQLDAKKISRDILNNEAILMPIIEAA--LARKLAAE 378 Query: 2954437 AQARTRAGQKVEKRKSSG--VAVLPGKLTDCETEDIARNELFLVEGDSAGGSAKMGRDKE 2954264 A T+A +K K K A L GK D LFL EGDSA G RDKE Sbjct: 379 KAAETKAAKKASKAKVHKHIKANLCGKDAD--------TTLFLTEGDSAIGYLIDVRDKE 430 Query: 2954263 YQAILPLRGKVLNTWETERDRLFANNEVHDISVAIGV 2954153 PLRGKVLN+W + N E+ DI G+ Sbjct: 431 LHGGYPLRGKVLNSWGMSYADMLKNKELFDICAITGL 467 >ref|NP_040579.1|G IV protein Length = 437 Score = 111 bits (278), Expect = 3e-22 Identities = 88/305 (28%), Positives = 139/305 (45%), Gaps = 1/305 (0%) Frame = -3 Query: 222109 DNQQGGMIQADAATNSLIITASDPVYRNLRSVIDQLDARRAQVYIEALIVELASNTQGNL 221930 D+ GG + NSL+++ S + L I +D R QV I++L+ E + +L Sbjct: 166 DSNGGGDVIDYPGNNSLLVSGSAAIMNALADFITSIDVARDQVLIQSLMFETSLVNGVDL 225 Query: 221929 GIQWQVASG-QFLGGTNLNPTAGLGNSIIXXXXXXXXXXXXXXXXXXXXXXXGSLTQGLN 221753 ASG + GG N T+ LG ++ T G + Sbjct: 226 SFAAGSASGDKVAGGFN---TSALGTALS--------------------------TAGGS 256 Query: 221752 IGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLVTLDNEEAKIVVGQNVPIATGSYSNL 221573 G +F L +Q S++ V+STP ++T + I VGQNVP TG + Sbjct: 257 FG----IFNGNVLALSIQAVKNDSNSKVISTPRILTQSGQTGYISVGQNVPFVTGKVTG- 311 Query: 221572 TSGNTNNAFNTYDRRDVGLTLHVKPQITEGGILKLQLYTEDSAVVAGTTSAQTGPTFTKR 221393 + N NN F T +RRDVG++L V P + G L L + T+ ++ + T++ +R Sbjct: 312 EAANVNNPFQTIERRDVGVSLKVTPVVMGNGQLVLTIDTKADSLTSQMTASDI--ITNQR 369 Query: 221392 SIQSTILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSESKIRAKTNLMVFL 221213 +Q+T+ +G+ ++LGGL+ N N VP +P IG LFRS S + + V L Sbjct: 370 HMQTTVQIKDGQTLLLGGLIDSNTTDGNRSVPWFESVPVIGWLFRSHSDSHNERTMFVLL 429 Query: 221212 RPVII 221198 +I Sbjct: 430 TAHVI 434 Score = 89.0 bits (219), Expect = 2e-15 Identities = 94/409 (22%), Positives = 164/409 (40%), Gaps = 35/409 (8%) Frame = +3 Query: 497634 IVVGEQVRGTVTL---RLNNVRWRDAFDTLLDTHGLAMSRRGSVIWVTPXXXXXXXXXXX 497804 +VV V+G +T+ +N D F ++L+ +G + G V+ Sbjct: 55 VVVNPDVKGNITVFNADVNQANIDDFFKSVLNANGFVLMA-GDPSGVSTPSKLPSQQTDN 113 Query: 497805 XXMHARAADLEP----------------LASRTFALHYPRAQDVQRLLAGATGQRLLSKR 497936 + +AD P L R F L R+ DV L S Sbjct: 114 DDDYEDSADYVPVGDSVPVSAQPQKPLDLTVRNFKLTRVRSSDVLPLAKIFVD----SNG 169 Query: 497937 GAAAAD-PRTNLLFVTDLAPRLDQVASLIEAIDRPSRQVRIEARIVEGEQGFSRNLGARV 498113 G D P N L V+ A ++ +A I +ID QV I++ + E Sbjct: 170 GGDVIDYPGNNSLLVSGSAAIMNALADFITSIDVARDQVLIQSLMFETSL---------- 219 Query: 498114 ALRAQGRPPSGESATFTTGARNALDLAARPLGGFEAATAGFTLFAAPLS------RVLDV 498275 +G +F G+ + +A GGF + G L A S VL + Sbjct: 220 --------VNGVDLSFAAGSASGDKVA----GGFNTSALGTALSTAGGSFGIFNGNVLAL 267 Query: 498276 ELSALEAQGRGQIVSSPRVVTADRVKAIVEQGSEVPY--------QAKVGNGVSGVQFRR 498431 + A++ +++S+PR++T + G VP+ A V N ++ R Sbjct: 268 SIQAVKNDSNSKVISTPRILTQSGQTGYISVGQNVPFVTGKVTGEAANVNNPFQTIERRD 327 Query: 498432 ATLKLEVEPQITPDGRVVLDLDVTKDSI-GEPTAAGPAIHTKHVQTRVEVENGGTVAIGG 498608 + L+V P + +G++VL +D DS+ + TA+ + +H+QT V++++G T+ +GG Sbjct: 328 VGVSLKVTPVVMGNGQLVLTIDTKADSLTSQMTASDIITNQRHMQTTVQIKDGQTLLLGG 387 Query: 498609 IYEQLNRNDVTRVPLLGKIPFLGALFRHRAQRDQRNELVVFITPTVVDA 498755 + + + VP +P +G LFR + + V +T V+ A Sbjct: 388 LIDSNTTDGNRSVPWFESVPVIGWLFRSHSDSHNERTMFVLLTAHVIKA 436 Score = 76.6 bits (187), Expect = 1e-11 Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 15/253 (5%) Frame = +2 Query: 1798331 QVDVRVVEFSRSVLKQAGLNFF-------KQSNGFSFGAFAPTGLTSITGSPGGALTYNT 1798489 QV ++ + F S++ L+F K + GF+ A T L++ GS G +N Sbjct: 207 QVLIQSLMFETSLVNGVDLSFAAGSASGDKVAGGFNTSALG-TALSTAGGSFG---IFNG 262 Query: 1798490 NVPISSAFNLVVNSVSHGLFADLSILEANNLARVLAQPTLVALSGQSANFLAGGEIPVPV 1798669 NV L + ++ ++ ++V++ P ++ SGQ+ G +P Sbjct: 263 NV----------------LALSIQAVKNDSNSKVISTPRILTQSGQTGYISVGQNVPFVT 306 Query: 1798670 PQSLGTIS--------IEWKPYGVGLTVTPTVLNPRRIALKVAPESSQLDFVHSITINGV 1798825 + G + IE + GV L VTP V+ ++ L + ++ L +T + + Sbjct: 307 GKVTGEAANVNNPFQTIERRDVGVSLKVTPVVMGNGQLVLTIDTKADSL--TSQMTASDI 364 Query: 1798826 QVPALTTRRADTTVELGDGESFVIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQS 1799005 R TTV++ DG++ ++GGLID TT VP+ +P+IG F++ S + Sbjct: 365 ---ITNQRHMQTTVQIKDGQTLLLGGLIDSNTTDGNRSVPWFESVPVIGWLFRSHSDSHN 421 Query: 1799006 DKELVIIVTPHLV 1799044 ++ + +++T H++ Sbjct: 422 ERTMFVLLTAHVI 434 >ref|NP_047359.1|maturation protein Length = 429 Score = 110 bits (275), Expect = 7e-22 Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 1/290 (0%) Frame = -3 Query: 222061 LIITASDPVYRNLRSVIDQLDARRAQVYIEALIVELASNTQGNLGIQWQVASGQFLGGTN 221882 L++TAS ++ L + +D R QV +E++I E T + G + A+G G Sbjct: 174 LLVTASASQHKELAAFFPSVDVPRTQVLVESVIFE----TTASDGFDFSFAAGDPSG--- 226 Query: 221881 LNPTAGLGNSIIXXXXXXXXXXXXXXXXXXXXXXXGSLTQGLN-IGWLHNMFGVQGLGAL 221705 +P AG N+ LT L+ G +F LG Sbjct: 227 -SPVAGGINT-------------------------DRLTSVLSSTGGSFGIFNGNILGLS 260 Query: 221704 LQYFAGVSDANVLSTPNLVTLDNEEAKIVVGQNVPIATGSYSNLTSGNTNNAFNTYDRRD 221525 L+ S + +LS P ++T+ + GQNVP TG + + N NN F T +R D Sbjct: 261 LKALETSSKSTLLSMPRILTMSGQPGTFTAGQNVPFVTGRVTG-EAANVNNPFQTIERHD 319 Query: 221524 VGLTLHVKPQITEGGILKLQLYTEDSAVVAGTTSAQTGPTFTKRSIQSTILADNGEIIVL 221345 VG++L V P +T GG+L + + T ++ T++ RSI +T+ +G+ ++L Sbjct: 320 VGISLKVVPVVTPGGLLIMDVSTNADSISDSQTASDI--ITNTRSISTTVQLKSGQTVLL 377 Query: 221344 GGLMQDNYQVSNSKVPLLGDIPWIGQLFRSESKIRAKTNLMVFLRPVIIS 221195 GG++ + S+S VP + IP IG LF S+S K L + +R +++ Sbjct: 378 GGMVDNRESDSDSSVPWVSKIPLIGALFTSKSSNANKRTLYILIRARVVN 427 Score = 92.8 bits (229), Expect = 1e-16 Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 11/272 (4%) Frame = +3 Query: 497970 LFVTDLAPRLDQVASLIEAIDRPSRQVRIEARIVE--GEQGFSRNLGARVALRAQGRPPS 498143 L VT A + ++A+ ++D P QV +E+ I E GF + A G P + Sbjct: 174 LLVTASASQHKELAAFFPSVDVPRTQVLVESVIFETTASDGFDFSFAAG---DPSGSPVA 230 Query: 498144 GESATFTTGARNALDLAARPLGGFEAATAGFTLFAAPLSRVLDVELSALEAQGRGQIVSS 498323 G T + L GG F +F +L + L ALE + ++S Sbjct: 231 GGINT------DRLTSVLSSTGG------SFGIFNG---NILGLSLKALETSSKSTLLSM 275 Query: 498324 PRVVTADRVKAIVEQGSEVPY--------QAKVGNGVSGVQFRRATLKLEVEPQITPDGR 498479 PR++T G VP+ A V N ++ + L+V P +TP G Sbjct: 276 PRILTMSGQPGTFTAGQNVPFVTGRVTGEAANVNNPFQTIERHDVGISLKVVPVVTPGGL 335 Query: 498480 VVLDLDVTKDSIGEPTAAGPAI-HTKHVQTRVEVENGGTVAIGGIYEQLNRNDVTRVPLL 498656 +++D+ DSI + A I +T+ + T V++++G TV +GG+ + + + VP + Sbjct: 336 LIMDVSTNADSISDSQTASDIITNTRSISTTVQLKSGQTVLLGGMVDNRESDSDSSVPWV 395 Query: 498657 GKIPFLGALFRHRAQRDQRNELVVFITPTVVD 498752 KIP +GALF ++ + L + I VV+ Sbjct: 396 SKIPLIGALFTSKSSNANKRTLYILIRARVVN 427 Score = 75.5 bits (184), Expect = 2e-11 Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 20/231 (8%) Frame = +2 Query: 1798412 FSFGAFAPTG-----------LTSITGSPGGAL-TYNTNVPISSAFNLVVNSVSHGLFAD 1798555 FSF A P+G LTS+ S GG+ +N N+ L Sbjct: 217 FSFAAGDPSGSPVAGGINTDRLTSVLSSTGGSFGIFNGNI----------------LGLS 260 Query: 1798556 LSILEANNLARVLAQPTLVALSGQSANFLAGGEIPVPVPQSLGTIS--------IEWKPY 1798711 L LE ++ + +L+ P ++ +SGQ F AG +P + G + IE Sbjct: 261 LKALETSSKSTLLSMPRILTMSGQPGTFTAGQNVPFVTGRVTGEAANVNNPFQTIERHDV 320 Query: 1798712 GVGLTVTPTVLNPRRIALKVAPESSQLDFVHSITINGVQVPALTTRRADTTVELGDGESF 1798891 G+ L V P V + + V+ + + S T + + TR TTV+L G++ Sbjct: 321 GISLKVVPVVTPGGLLIMDVSTNADSIS--DSQTASDI---ITNTRSISTTVQLKSGQTV 375 Query: 1798892 VIGGLIDRETTSNVNKVPFLGDLPIIGAFFKNLSYQQSDKELVIIVTPHLV 1799044 ++GG++D + + + VP++ +P+IGA F + S + + L I++ +V Sbjct: 376 LLGGMVDNRESDSDSSVPWVSKIPLIGALFTSKSSNANKRTLYILIRARVV 426 Score = 48.9 bits (115), Expect = 0.002 Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 21/199 (10%) Frame = -3 Query: 223195 MRRVATTLIVAGIIVSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLV 223016 M+++ +L+ ++ Q+ V LN NA + + TGK +I+ P VKG++ V Sbjct: 1 MKKLLASLLC--VLSFQSFAIPVELN--NAPVREFVSWYSKTTGKPVIISPDVKGEIT-V 55 Query: 223015 AERPVPEDQALKTLQSALRMQGFALVQDHGVL------KVVPEADAKLQGVP--TYVGNA 222860 V +D+ + S LR GF L + + +D+ + VP +Y G+ Sbjct: 56 YSADVTKDELPQFFTSVLRANGFDLSPGNPAVVQKFNRNTYEYSDSFSEPVPASSYDGDV 115 Query: 222859 PQARGD---------QVITQVFELHNESANNLLPVLRPLISPNNT--VTAYPANNTI--V 222719 P GD +ITQ + ++N A +L PV+ + N YP I + Sbjct: 116 PPPTGDFFTKPEIRANLITQTYPVNNVRAKDLAPVIDIFLKGENIAGTKVYPLMGRIFLL 175 Query: 222718 VTDYADNVRRIAQIIAGVD 222662 VT A + +A VD Sbjct: 176 VTASASQHKELAAFFPSVD 194 >ref|NP_899539.1|PhoH domain protein Length = 235 Score = 110 bits (275), Expect = 7e-22 Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 8/177 (4%) Frame = +1 Query: 3303316 VGPAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLY 3303495 +G AGTGKT+LA D ++ +P + GE LG+LPG L +K++P+++ + Sbjct: 45 IGSAGTGKTWLATTLGADMYSAFDYTEFIILKPTLSCGEELGYLPGTLEEKMEPWIQTVT 104 Query: 3303496 DALYDLLGFDKTAKMFERQMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIG 3303675 L D LG DK K + I P+ ++RG+T ++ FI++DEAQN T +++ +TRIG Sbjct: 105 QPLKDRLGADK-FKCDWNKRIHAEPIQFVRGKTFDNCFIVVDEAQNLTKTEIQTIMTRIG 163 Query: 3303676 FGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVR--------GIALTRFTSADVVR 3303822 +K V GD Q D +++G E + V GI + FT+ DVVR Sbjct: 164 ENTKMVFCGDLKQDDHKMIYRTGQKEISGLAWMVNEIRNQQRSGIEIIEFTNKDVVR 220 Score = 99.8 bits (247), Expect = 1e-18 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 4/177 (2%) Frame = +3 Query: 2360061 FVTLLGQAGTGKTXXXXXXXXXXXXDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPW 2360240 FV +G AGTGKT Y E I+ + T+ GE++G+LPGT EEKM+PW Sbjct: 41 FVFAIGSAGTGKTWLATTLGADMYSAFD-YTEFIILKPTLSCGEELGYLPGTLEEKMEPW 99 Query: 2360241 MGAFDDNLEVLQKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYLIIDEAQNL 2360420 + L+ D +W + R+ + + F+RG+TF + ++++DEAQNL Sbjct: 100 IQTVTQPLKDRLGADKFKCDWNK---------RIHAEPIQFVRGKTFDNCFIVVDEAQNL 150 Query: 2360421 TPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYL----TEGSSGLTYVVDRFKGWGHSG 2360579 T +++T++TR G TK+V G++ Q D + + SGL ++V+ + SG Sbjct: 151 TKTEIQTIMTRIGENTKMVFCGDLKQDDHKMIYRTGQKEISGLAWMVNEIRNQQRSG 207 >ref|NP_073695.1|neck appendage protein precursor Length = 740 Score = 110 bits (275), Expect = 7e-22 Identities = 65/172 (37%), Positives = 88/172 (51%) Frame = -3 Query: 2876809 ALGSVYSLYAADDSGNLAAGSLAFQVTRTGSSPSALQTVSVQPYTDNAFPCGAAGFRWSV 2876630 ALG LY D + S+ FQ+ + G+ + P TDN G R Sbjct: 562 ALGGRMRLYVTDP---VTLESVYFQIYQNGA---------IVPSTDNLQNMGQXSNRMRN 609 Query: 2876629 VYAATGVINTSDENQKEQIEGIPDAWLDAWADVDYFAFKFKDATAEKGADNARWHVGFVA 2876450 +YA TG INTSDE K I I D LDAW V ++ +KFKDA EKG + AR+H G +A Sbjct: 610 IYAGTGAINTSDERHKTDIAPISDKVLDAWEKVKFYQYKFKDAVDEKG-EEARYHFGVIA 668 Query: 2876449 QRVRDAFAKHGIDAAKIGLLCWDSWPAQSAVLDDEGNVIKPAIDAGEAWGIR 2876294 Q++ F G+ A GL+ +D W A D EGN+++ +AG + IR Sbjct: 669 QQIVKVFEDEGLSAFDYGLVGYDEWEATEDEYDSEGNLVEKGREAGNIYSIR 720 >ref|NP_861955.1|gp52 topoisomerase II, medium subunit Length = 441 Score = 110 bits (274), Expect = 9e-22 Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 1/223 (0%) Frame = -3 Query: 2953471 LSYAVSVVKSRALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVLGKYHPHG 2953292 L+YA+ V++RA+P++ DG KPVQR ++ ++ G K K A + G V + HG Sbjct: 17 LAYAMYTVENRAIPNMIDGFKPVQRFVVHRALDLARGNKEKFHKLASIAGGVADLGYHHG 76 Query: 2953291 DQSAYDALVRLAQDFSLRYPLIDGQGNFGSRDGDGAAAMRYTEARLTPIAKLLLDEIDQG 2953112 + SA DA +A ++ YPL+DGQGNFGSR AAA RY AR++ + + + Sbjct: 77 ESSAQDAGALMANTWNNNYPLLDGQGNFGSRTVQKAAASRYIFARVSKNFYNVYKDTEYA 136 Query: 2953111 TVDFMPNYDGSFEEPKTLPSRMPFVLLNGASGIAVGLATEIPSHNLREVAAAAVTLIRNP 2952932 + D PK +P VLLNG SGIA G AT I H+ + V A + ++ Sbjct: 137 PA----HEDKEHIPPKFYLPIIPTVLLNGVSGIATGYATNILPHSFKSVKKAVLQALQGK 192 Query: 2952931 KLSHAELMNLIPGPDFPGGGQIISSDTEIAAAYE-TGRGSLKV 2952806 ++ + + P+F G + EI Y+ T R +++ Sbjct: 193 NVTKPK----VEFPEFRGEVHEVDGRYEIHGTYKFTSRTQMQI 231 Score = 107 bits (266), Expect = 8e-21 Identities = 82/290 (28%), Positives = 132/290 (45%), Gaps = 2/290 (0%) Frame = +3 Query: 1233012 LDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVIGKYHPHG 1233191 L YAM + RA+P++ DG KPV R V+ +L + K A I G V + HG Sbjct: 17 LAYAMYTVENRAIPNMIDGFKPVQRFVVHRALDLARGNKEKFHKLASIAGGVADLGYHHG 76 Query: 1233192 DTAVYDTIVRMAQDFSLRYMLIDGQGNFGSIDGDNAAAMRYTEIRMAKIGHELLADIDKE 1233371 +++ D MA ++ Y L+DGQGNFGS AAA RY R++K + + D Sbjct: 77 ESSAQDAGALMANTWNNNYPLLDGQGNFGSRTVQKAAASRYIFARVSKNFYNVYKD---- 132 Query: 1233372 TVDFEPNYDGNE-MQPSVLPSRIPNLLINGSSGIAVGMATNIPPHNLNEVVDACQHLLGN 1233548 ++ P ++ E + P IP +L+NG SGIA G ATNI PH+ V A L Sbjct: 133 -TEYAPAHEDKEHIPPKFYLPIIPTVLLNGVSGIATGYATNILPHSFKSVKKAVLQALQG 191 Query: 1233549 PEATIDELIEIIPAPDFPT-AGIIYGVAGVRDGYRTGRGRVVMRAATHFEEIDRGQRMAI 1233725 T P +FP G ++ V DG G + T + Sbjct: 192 KNVT-------KPKVEFPEFRGEVHEV----DGRYEIHGTYKFTSRTQMQ---------- 230 Query: 1233726 IVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSGMRVVIELKR 1233875 + E+PY+ ++ + + ++ + + +K G+ D+ + G ++ ++ Sbjct: 231 -ITEIPYKFDRETYVSKVLDPLEDK---GLISWEDDCGEHGFGFKVKFRK 276 >ref|NP_049875.1|gp52 topoisomerase II, medium subunit Length = 442 Score = 109 bits (272), Expect = 2e-21 Identities = 85/261 (32%), P