Prophage Finder Output Genome file: C:\Documents and Settings\Rob\My Documents\Phage\ProphageFinderResults\anabenavar.txt Sequence Header: >Contig232 Genome size: 6365727 Host's GC content: 41.42 Predicted Codon Position GC: 1st: 52.37 2nd: 37.88 3rd: 37.78 >PredictedProphage1 Length: 7086 Number of hits = 5 GC Coding First Second Third 38.29 36.32 47.59 36.90 24.48 Left Right Strand Best Blast Hit Score Evalue 568439 569548 1 ref|NP_445687.1|putative helicase 75.1bits(183) 5e-11 570338 570538 1 ref|NP_817450.1|gp112 47.8bits(112) 0.009 573666 574022 -1 ref|NP_851958.1|hypothetical protein 97.8bits(242) 7e-18 574068 574340 -1 ref|NP_851959.1|hypothetical protein 80.1bits(196) 2e-12 574856 575524 -1 ref|NP_046574.1|unknown 62.8bits(151) 3e-07 >PredictedProphage2 Length: 14223 Number of hits = 8 GC Coding First Second Third 37.64 37.02 50.59 35.06 25.41 Left Right Strand Best Blast Hit Score Evalue 5329532 5329750 -1 ref|NP_943951.1|hypothetical protein 42.7bits(99) 0.28 5330833 5331126 -1 ref|NP_835519.1|probable ss-1,3-N-acetylglucosaminyltransferase 59.3bits(142) 3e-06 5333244 5333537 -1 ref|NP_835519.1|probable ss-1,3-N-acetylglucosaminyltransferase 60.8bits(146) 1e-06 5334213 5334533 -1 ref|NP_835519.1|probable ss-1,3-N-acetylglucosaminyltransferase 62.0bits(149) 5e-07 5336430 5336918 -1 ref|NP_835519.1|probable ss-1,3-N-acetylglucosaminyltransferase 64.7bits(156) 7e-08 5337624 5337908 -1 ref|NP_835519.1|probable ss-1,3-N-acetylglucosaminyltransferase 55.5bits(132) 4e-05 5342419 5342745 -1 ref|NP_835519.1|probable ss-1,3-N-acetylglucosaminyltransferase 62.4bits(150) 3e-07 5343434 5343754 -1 ref|NP_835519.1|probable ss-1,3-N-acetylglucosaminyltransferase 58.9bits(141) 4e-06 Prophage Finder Output Genome file: C:\Documents and Settings\Rob\My Documents\Phage\ProphageFinderResults\anabenavar.txt Sequence Header: >Contig237 Genome size: 37151 Host's GC content: 46.46 Predicted Codon Position GC: 1st: 55.47 2nd: 39.24 3rd: 46.31 >PredictedProphage1 Length: 10413 Number of hits = 5 GC Coding First Second Third 46.17 47.57 52.24 41.53 48.94 Left Right Strand Best Blast Hit Score Evalue 8883 9227 -1 ref|NP_817990.1|gp17 35.4bits(80) 0.41 10750 11964 -1 ref|NP_852753.1|putative terminase large subunit TerL 108bits(269) 5e-23 12201 12473 1 ref|NP_046614.1|histone-like prokaryotic DNA-binding protein family 85.9bits(211) 3e-16 14913 15422 1 ref|NP_817439.1|gp101 120bits(301) 1e-26 19089 19295 1 ref|NP_612875.1|putative recombinase 46.2bits(108) 2e-04 Prophage Finder Output Genome file: C:\Documents and Settings\Rob\My Documents\Phage\ProphageFinderResults\anabenavar.txt Sequence Header: >Contig229 Genome size: 35762 Host's GC content: 38.50 Predicted Codon Position GC: 1st: 50.58 2nd: 37.09 3rd: 32.84 >PredictedProphage1 Length: 11570 Number of hits = 6 GC Coding First Second Third 41.03 41.71 50.96 37.62 36.55 Left Right Strand Best Blast Hit Score Evalue 23315 23506 -1 ref|NP_817941.1|gp90 37.4bits(85) 0.10 23950 24453 -1 ref|NP_665964.1|putative plasmid partitioning protein Soj 77.8bits(190) 7e-14 26713 27894 1 ref|NP_463492.1|putative integrase 86.7bits(213) 1e-16 30612 31913 1 ref|YP_006543.1|Ban 299bits(766) 1e-80 33182 33889 1 ref|NP_050109.1|integrase 45.4bits(106) 4e-04 34546 34884 -1 ref|YP_077227.1|Hypothetical protein 35.8bits(81) 0.30 Prophage Finder Output Genome file: C:\Documents and Settings\Rob\My Documents\Phage\ProphageFinderResults\anabenavar.txt Sequence Header: >Contig230 Genome size: 366354 Host's GC content: 40.53 Predicted Codon Position GC: 1st: 51.83 2nd: 37.64 3rd: 36.28 Prophage Finder Output Genome file: C:\Documents and Settings\Rob\My Documents\Phage\ProphageFinderResults\anabenavar.txt Sequence Header: >Contig231 Genome size: 300758 Host's GC content: 41.95 Predicted Codon Position GC: 1st: 52.70 2nd: 38.03 3rd: 38.69 >PredictedProphage1 Length: 11798 Number of hits = 5 GC Coding First Second Third 43.11 44.73 53.59 40.37 40.23 Left Right Strand Best Blast Hit Score Evalue 34261 34452 -1 ref|YP_195203.1|putative S-layer protein 48.5bits(114) 3e-04 37249 37725 -1 ref|NP_945090.1|gp59 46.2bits(108) 0.002 41272 41937 1 ref|NP_817947.1|gp96 92.0bits(227) 3e-17 44706 45329 1 ref|NP_758929.1|ORF37 62.4bits(150) 2e-08 45885 46058 1 ref|NP_700429.1|hypothetical protein 40.8bits(94) 0.067 >PredictedProphage2 Length: 6299 Number of hits = 5 GC Coding First Second Third 39.61 42.54 52.45 37.06 38.11 Left Right Strand Best Blast Hit Score Evalue 138086 138538 -1 ref|NP_612994.1|hypothetical protein 46.2bits(108) 0.002 140658 141008 1 ref|YP_006485.1|Ssb 69.7bits(169) 1e-10 141682 142125 1 ref|NP_665964.1|putative plasmid partitioning protein Soj 70.9bits(172) 6e-11 143194 143403 1 ref|NP_047953.1|gp7 55.5bits(132) 3e-06 144127 144384 1 ref|NP_438136.1|hypothetical protein 41.2bits(95) 0.052 >PredictedProphage3 Length: 10348 Number of hits = 5 GC Coding First Second Third 40.63 42.76 55.63 37.59 35.06 Left Right Strand Best Blast Hit Score Evalue 236725 237006 -1 ref|NP_463528.1|gp63 57.0bits(136) 9e-07 237398 238417 -1 ref|NP_818503.1|gp203 139bits(350) 1e-31 240404 240802 -1 ref|NP_958065.1|gp10 88.2bits(217) 4e-16 241231 241524 -1 ref|NP_943827.1|gp49 98.6bits(244) 3e-19 246458 247072 1 ref|YP_006479.1|DarB 49.3bits(116) 2e-04