Prophage Finder Output

Sequence file:  temp/rsph2.txt
Sequence Header:  >Contig2

Sequence size:  943022
Sequence GC content:  69.01
Predicted Codon Position GC:  	1st:  69.34	 2nd:  45.33	 3rd:  84.47

 >PredictedProphage1 
 Length:   6016 
 Number of hits =   8 
 GC	Coding	First	Second	Third
 71.21 	 70.47 	 69.63 	 47.99 	 93.78 
 Left	Right	Strand	Best Blast Hit	Score	Evalue
 418447	418605	1	ref|NP_046778.1|gpFI 	50.8bits(120)	2e-04
 418623	419117	1	ref|NP_052270.1|similar to P2 tail tube protein FII, Swiss-Prot Accession Number P22502	64.7bits(156)	1e-08
 419156	419377	1	ref|NP_490623.1|hypothetical protein	76.6bits(187)	3e-12
 419836	420606	1	ref|NP_050646.1|putative tape measure protein	80.1bits(196)	3e-13
 421931	422311	1	ref|NP_758935.1|ORF44 	116bits(291)	3e-24
 422344	422523	1	ref|NP_878205.1|gpX 	52.4bits(124)	6e-05
 422532	423356	1	ref|NP_758937.1|ORF46 	169bits(427)	5e-40
 423683	424462	1	ref|YP_164085.1|Dam modification methylase	219bits(559)	2e-55
 
 >PredictedProphage2 
 Length:   18426 
 Number of hits =   8 
 GC	Coding	First	Second	Third
 65.04 	 68.16 	 69.56 	 48.64 	 86.27 
 Left	Right	Strand	Best Blast Hit	Score	Evalue
 732405	732608	-1	ref|NP_076827.1|Csp 	67.8bits(164)	1e-09
 733305	733487	1	ref|NP_076827.1|Csp 	71.6bits(174)	1e-10
 735328	735981	-1	ref|NP_700401.1|Integrase protein	82.4bits(202)	6e-14
 737285	737953	-1	ref|NP_944320.1|gp12 	132bits(331)	6e-29
 738610	739227	1	ref|NP_758916.1|ORF23 	165bits(418)	5e-39
 739407	740354	1	ref|NP_046900.1|gp5 	170bits(430)	2e-40
 744403	745158	1	ref|NP_536383.1|DNA adenine methylase	208bits(530)	5e-52
 750231	750830	1	ref|NP_817764.1|gp3 	76.6bits(187)	3e-12
 
 >PredictedProphage3 
 Length:   10989 
 Number of hits =   7 
 GC	Coding	First	Second	Third
 71.16 	 70.80 	 71.98 	 48.53 	 91.88 
 Left	Right	Strand	Best Blast Hit	Score	Evalue
 899054	899368	-1	ref|NP_858965.1|tail lenght tape measure protein	44.3bits(103)	0.017
 901335	901700	-1	ref|NP_958590.1|putative major tail protein	43.1bits(100)	0.038
 902655	903599	-1	ref|NP_758919.1|ORF26 	192bits(488)	4e-47
 904800	905612	-1	ref|NP_046900.1|gp5 	169bits(427)	5e-40
 905792	906967	-1	ref|NP_758916.1|ORF23 	271bits(694)	5e-71
 907407	908567	-1	ref|NP_918997.1|putative terminase large subunit (carboxy-end terminase)	112bits(281)	4e-23
 909830	910042	-1	ref|NP_040580.1|DNA packaging protein	40.4bits(93)	0.25