Sequence file:  temp/rsph2.txt
Sequence Header:  >Contig2

>PredictedProphage1-Hit1
WIDPELNTEATMKAGKLFLDFDIEPPAPLEHLTLQAHRNGDYYEELVLSVTGN
>PredictedProphage1-Hit2
MALPRTIRNFNAFVDGVSYFGIVDEGKLPAVKIQTEAHRGAGMDGPIGIDVGMEALASKMSFSEWVPAIVKKLGRQERFVFRPAMANPSDFGAVPIVATLSGLITVSEPGDLKPGTPSKLKISMDVRSYRLEIDGELLLDIDLPNAKRVIGGQDQLAEMRRAMGI
>PredictedProphage1-Hit3
QPLKRASGDIASVTVRKPDVGSLRGLKLTDILQMDVTALSRLLPRITEPALLPDEVAALDPADFLGLSAAVVGF
>PredictedProphage1-Hit4
FLRPAAEFERFRVQLTNLEGSAEGADRALRWIEDFATRTPLQLNDTVAAYARLKAFGLDPTKGAMQALVDTMAATGGGAEQLDGLVLALGQAWTKGKLQGEEALQMLERGVPVWDLLGAKMGKTAAELQEMASKGQLGRKEIELLIEAMAEKNKGASEGMAKTWDGILSNVLDHWGRFQRMVMASGVFDFLKGRLQEILGTLNAMAEDGRLQLWADEVARVILRTLEAMWAFAGQAVAAWNLLVPVVAQAADLLGGW
>PredictedProphage1-Hit5
ASLVMMALGSFRFGVNRAGYQSFSRSASWRWEAQDRLGRAPALQYLGPGSDEITLEGVIYPHFRGGLRQVELMRLVAGTGQPMVLVDGLGWVWERWVIATVEERKSLFLTDGAPRKIEFTLGLRAYG
>PredictedProphage1-Hit6
LAGDMLDAICKARLGSERHVPAVLAANPHLAALGSVYPAGVLITLPEVAEPVATGQIRLW
>PredictedProphage1-Hit7
MIPAFRLTVDGEDATGAVADRLLSLVITDEDGTKADRLEIELDDRDGRLAFPDTEARIEVALGFAGQPLAAMGVFAVDGVAGSGPRQSLRITATAADLKGEIRSPRTRAWRNRSLRDIVATVAAEAGLRPVVGESVAGTAWDYLAQTAESNLHFLTRIAATLDATAKPAGGALVVQRRGEGRTAAGDPLTPPVLPPWRLSDWSWSFEGRSVYRAAEAEWTETGSGITHRVRVGSGTPLKKLRHAYPTEAEALRAAEAVLSGAARAAMTLEARLAG
>PredictedProphage1-Hit8
QPVAPWIGGKRNLARRICAILDRSPCLTYAEPFVGMAGIFLRRSSRPRAEVINDRGRDVANLFRILQRHYPQFLDTLRFQLTTRAEFERLGATDPDTLTDLERAARFLYLQRTAFGGKVSGRNFGVSSHRPGRFNLTTLEPMLEDLHSRLAGVIVECLDWADFLARYDRPETLFYLDPPYWGSETDYGRGLFQREDFGLMAERLAKLQGRFLLSINDVPQIRAIFGRFRITEVTTTYSISGSAKGNGTARPELLVSNWDI
>PredictedProphage2-Hit1
MANGTVKWFNATKGFGFIAPAHGSKDVFVHVTALERAGIRQLNDGQALTYDMETDRNGRESATNLVLA
>PredictedProphage2-Hit2
MANGTVKWFNATKGFGFIAPTGGSKDVFVHVTALERAGIRQLDDGQAVSFDLERDRNGRES
>PredictedProphage2-Hit3
FTDLAEATRKGYIRHIRQIEADFGDMPVQALADPRVRGEFLDWRDRLAQKSKRSADYAFSVLARILSWAHDRRKIPVNPCEKPGRLYTGSRADSIWTEAQIAAFLAVAPRPVRLPFLLAIWTGQRQADILQLTWTAYDGQAIRLRQSKTGRHMLIPVAQPLREAMEEAKARRRTLTICETSRGQPWTSDGFKTSFGKAQASAGIEGVTFHDLRGTAVT
>PredictedProphage2-Hit4
LRILIGCEASGVMRRAFATRGHDVWSCDLLPAEDRSNRHIVGDVRDHLADGWDLLIVAHPPCTRLCNSGVRWLHEPSKRLPETYAAAEREAYLRMSREERLAFLWADLDRGAALFAACWQAPVPRVAVENPVMNPHARARLPADLARPQTVQPWWFGEPFFKATSFYLRGLPRLAATNRLTPPRPGTPEHKRWSAVHRASPGPDRWKFRSRTFEGVAEACADQ
>PredictedProphage2-Hit5
IVKLFLLDQYDDAELDRKKVAAMYAMFITSNDPDAAPLEGELGDQVAPGQIVRLDPGEDMKVADPADSGATYEPFQYRTLLQVSAALGIPYAHLSQDMVKANYSNARTALMEFRRRVEAFQHSVLVYQLCRPVWARFTDLAVLTGAVRLPGYERRRRDYLACEWLPPKWQWVDPLKDIRAEIEEIGAGLKSRSQAIGERGYDAEEV
>PredictedProphage2-Hit6
NYPMIAGRVFGTPLLVDPVKGAAFLAGLGPRLVNGALELRGLEELAPDRVAEAGRIAPRASVLLDDAGDARREAGRPLYRVEGGVAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQITAAVADPSVRGIALEIDSYGGEVAGLFDLADTIRAARAVKPVRAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQAMADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQARVEASRGLFAETVAAGRGARLTRQQALATEAQVLDGAAAVAAGLADEVSDLRSAFAAFRAELSHPHLPSPRAGAPA
>PredictedProphage2-Hit7
AAPVAPWLGGKKRLHPLILERIEAIPHRAYVEPFVGMGGIFLRRRFRPRLEVMNDRNGEIINLFRILQRHYPQLLEIMRFQICSRREFDRLRLTDPATLTDLERAARFLYLQRLSFGGKLDGVFGVSAGHGPRFSLARLEPVLDAAHERLDGVVFESLDWADLIPRYDTTETLFYLDPPYFGGENDYGKGLFDRAQFARIAEILGGLKGAFLLSINDTPEIRALFGRFHLEPVRLSYSVSASGGTEAQELLV
>PredictedProphage2-Hit8
LLMASGGLDSTTVAYWLTERGVQFIPVFFDYGQHCVETEWETLKEVLPASAAHPERNDISDLFRGSKSRLITEADLWNEEVKDEDLYVPYRTLLFYSAAAARAQTLGAFEVYTGFINSNRAKEIDCTAEFMNKLDALTDSVGPVRFLSPFRFWSKSEVAKESIRLGVPIGRTFSCQAASLMPCGACPNCVERLAALRETG
>PredictedProphage3-Hit1
SLRAQVDPLYAASKRYEQALETLNAAQAAGVIGDQERARTLKLLDAQMISADRATTAATLGIGRFTPAITNASFQVQDFAVQVASGQSAMIAFTQQAPQLLGAFG
>PredictedProphage3-Hit2
ETAYGGLTWTAVGEVTEVPEYGGSAEVVNHTPLATGITQKYHGAVNYGSMQIPLAFNSTDAGQAILEAARKNRNRIAFKIAFPKIDPLSTEGAADYFQGKVFGFTKSAPANGVVSGSVTVEI
>PredictedProphage3-Hit3
INILPNLYTRLGQMGLFQFEGVTQRSVIIEQAEGVLSLLPSQPWGGPATVGGRERRSMRSFALPHIPHDDVITAADVQGQPALGSTGQADPLAEVMTRKLALMRRKHAATREYMEMNALRGVVKDGAGLTLYDYFAEFGLARISVDFLLGTAGTNVQAKCREVLRAVEEELKGESMTGVTALVSPEFFDKLIGHPKVEEAYKYYASSGAQPLRQDVRRSFPFAGLLFEEYVGSVTLAGGASERLVPAQEGTAFPLGTMDTFRTYGAPADLLEAVNTIGQPIYARQLLDPKGRWIDLMTEANILPVNKRPRLAVRI
>PredictedProphage3-Hit4
NYPMIAGRVFGTPLLVDPVKGAAFLAGLGPRLVNGALELRGLEELAPDRVAEAGRIAPRASVLLDDAGDARREAGRPLYLVEGGVAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQISAAVADPSVRGIALEIDSYGGEVAGLFDLADAIRAARAVKPVRAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQAMADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQARVEASRALFAETVAAGRGARLSRQQALATEA
>PredictedProphage3-Hit5
MNARARYLVRNNGYAQGALDSWAANTVGTGVKPSSLIAAPARKAALQRLWQDWTDEADAEGVTDFYGLQRRIAREFFLTGECFVRLRARRPGDGLTVPLQLQCLPSEMLPIGRTEVLGGGRAIRQGIEFDAVGRRVAYHFHRRHPGDPTEPGLAGETVRVPAEDVLHIVDPVESGQLRGVSRFAPAIVKLFLLDQYDDAELDRKKVAAMYAMFITSNDPDAAPLEGELGDQVAPGQIVRLDPGEDMKVADPADSGATYEPFQYRTLLQVSAALGIPYAHLSQDMVKANYSNARTALMEFRRRVEAFQHSVLVYQLCRPVWARFTDLAVLTGAVGLPGYERRRRDYLACEWLPPKWQWVDPLKDIRAEIEEIGAGLKSRSQAIGERGYDAEEV
>PredictedProphage3-Hit6
MECPHCGTLIAHRHKVGLNRAALEGRGGWLHEGRHIEANGRRALVRIDDPDIRRTPIASYSLNGAAAAFASWEELVQRYETERRRFEALGDDTDFARVHYTDIGVPYRRPEAEEEGALTAAQIREHMRSQERRVAPAWTRFVTVSIDVQGNRFEVLVMAWGAQGERMPIDRFAVAQPPDHAPRAKGDDERYRALDPGRYVEDADALLDLPERLYPVEGASWSLKPCALVIDFNGPAGWSDNAEKFWRARRRNGQGGLWWLSIGRGGFQQRDRVWHEAPERGSKGRRARGIKLLNMATDRMKESVLAAVGRFEGGQGAQHVPSWLEAEHLDELLAERRGAKGYEKRQGAVRNETLDLSVQALAVAEFKGLNRIDWQAPPAWAEAGPAN
>PredictedProphage3-Hit7
LNRAQLARAFSVSENTITKWISQGMPVMSDGQNGVAYEFRLRHCYAWRMERDARARAAKAQGDRLAAQAAL