All genomes were run under the default conditions with an evalue of 0.5, hits per prophage of 5, and hit spacing of 5500.
Results for the DOE Draft Microbial Genomes whose Prophage Finder results have been manually annotated are avalable here.
| Genome | Blast |
Complete |
DNA |
Genes |
Proteins |
Summary |
| Acidobacterium sp. Ellin6076 | ||||||
| Anabaena variabilis ATCC29413 | ||||||
| Anaeromyxobacter dehalogenans 2CP-C | ||||||
| Arthrobacter sp. FB24 | ||||||
| Azotobacter vinelandii | ||||||
| Bifidobacterium longum | ||||||
| Brevibacterium linens | ||||||
| Burholderia strain 383 | ||||||
| Burkholderia cenocepacia AU 1054 | ||||||
| Burkholderia cenocepacia HI2424 | ||||||
| Burkholderia vietnamiensis strain G4 (R1808) | ||||||
| Burkholderia xenovorans LB400 | ||||||
| Chlorobium phaeobacteroides DSMZ 266(T) | ||||||
| Chlorochromatium aggregatum | ||||||
| Chloroflexus aurantiacus | ||||||
| Chromohalobacter salexigens DSM3043 | ||||||
| Clostridium thermocellum | ||||||
| Crocosphaera watsonii WH8501 | ||||||
| Cytophaga hutchinson | ||||||
| Dechloromonas aromatica | ||||||
| Deinococcus geothermalis, DSM11300 | ||||||
| Desulfitobacterium hafniense | ||||||
| Desulfovibrio desulfuricans | ||||||
| Desulfuromonas acetoxidans | ||||||
| Ehrlichia canis | ||||||
| Enterococcus faecium | ||||||
| Exiguobacterium | ||||||
| Ferroplasma acidarmanus | ||||||
| Frankia sp. CcI3 | ||||||
| Frankia sp. EAN1pec | ||||||
| Geobacter metallireducens | ||||||
| Haemophilus somnus | ||||||
| Jannaschia sp.CCS1 | ||||||
| Kineococcus radiotolerans sp nov | ||||||
| Lactobacillus brevis | ||||||
| Lactobacillus casei | ||||||
| Lactobacillus delbrueckii subsp. bulgaricus | ||||||
| Lactobacillus gasseri | ||||||
| Lactococcus lactis subsp. cremoris SK11 | ||||||
| Leuconostoc mesenteroides | ||||||
| Magnetococcus MC-1 | ||||||
| Magnetospirillum magnetotacticum | ||||||
| Mesorhizobium sp. BNC1 | ||||||
| Methanococcoides burtonii | ||||||
| Methanosarcina barkeri | ||||||
| Methanospirillum hungateii JF1 | ||||||
| Methylobacillus flagellatus strain KT | ||||||
| Methylobium petroleophilum PM1 | ||||||
| Moorella thermoacetica ATCC39073 | ||||||
| Nitrobacter hamburgensis | ||||||
| Nitrobacter winogradskyi Nb-255 | ||||||
| Nitrosococcus oceani ATCC 19707 | ||||||
| Nitrosospira multiformis ATCC 25196 | ||||||
| Nostoc punctiforme | ||||||
| Novosphingobium aromaticivorans | ||||||
| Oenococcus oeni | ||||||
| Paracoccus denitrificans 1222 | ||||||
| Pediococcus pentosaceus | ||||||
| Pelobacter carbinolicus | ||||||
| Pelobacter propionicus | ||||||
| Pelodictyon luteolum DSMZ 273(T) | ||||||
| Pelodictyon phaeoclathratiforme BU-1 (DSMZ 5477(T)) | ||||||
| Polaromonas JS666 | ||||||
| Prochlorcococcus sp. Natl. 12A | ||||||
| Prochlorococcus sp. MIT9312 | ||||||
| Prosthecochloris aestuarii SK413DSMZ 271(t) | ||||||
| Pseudomonas fluorescens | ||||||
| Pseudomonas syringae | ||||||
| Psychrobacter | ||||||
| Psychrobacter cryohalolentis | ||||||
| Ralstonia eutropha | ||||||
| Ralstonia metallidurans | ||||||
| Rhodobacter sphaeroides Chr1 | ||||||
| Rhodobacter sphaeroides Chr2 | ||||||
| Rhodoferax ferrireducens | ||||||
| Rhodospirillum rubrum | ||||||
| Rubrobacter xylanophilus | ||||||
| Saccharophagus degradans strain 2-40 | ||||||
| Shewanella amazonesis | ||||||
| Shewanella baltica OS155 | ||||||
| Shewanella denitrificans OS217 | ||||||
| Shewanella frigidimarina NCIMB400 | ||||||
| Shewanella sp. PV-4 | ||||||
| SilicibacterTM1040 | ||||||
| Sphingopyxis alaskensis RB2256 | ||||||
| Streptococcus suis | ||||||
| Streptococcus thermophilus | ||||||
| Synechococcus elongatus PCC 7942 | ||||||
| Synechococcus sp. CC9605 (Oligotrophic) | ||||||
| Synechococcus sp. CC9902 (Coastal) | ||||||
| Thermobifida fusca | ||||||
| Thiobacillus denitrificans sp. ATCC 25259 | ||||||
| Thiomicrospira crunogena | ||||||
| Thiomicrospira denitrificans | ||||||
| Trichodesmium erythraeum | ||||||
| Xylella fastidiosa (almond strain) | ||||||
| Xylella fastidiosa (oleander strain) |